Citrus Sinensis ID: 046057

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------120
MAAAGLQLQSSVSCRAVSQERSLFKFKPSTGSSAFVKTTQFCFFFIEFAYLLIFYLKSHYFSRRRQRGVSTPRTKDTGSKGFTPKTPVGTGIQKRDQKKNGDKEGSGTPVSGEYGGPTKKTPAPTNGVEKKPAVELSRDNQIGEQNVDITEQESENIPRTNKDLISAKSSQVVGNGSVGRIDDVFQKKETTPKSDIKNVTEKSTSKRKHLNLNKSNDSVRDESIKADIKASEDASLKLKKEVEENLRKQEIERLADENFLRQKKIFVYPQVVKPDQDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNIYENNDQKDFCIAVEGLMDALAFEDFLLEEKRREQEKLAKEKAEQERQEEERRRIEAEHAAIEADRAQARVETERKREMLRELKKKAARSVDNVWYIEPSEFKGEDLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVYDNNSRQDFHAIVPKSIPDELYWVEEERQTFRKLQEERRLKEEAARAKAEKTAHMKAETKERTLKRFLLSQKHIVYTDPLDVQAGTTVTVFYNPANTVLNGKSEIWFRCSFNHWTHRMGILPPQKMVPVKYSTHVKTTVKVPLDAYTMDFVFSEWEDGGTFDNKNGMDYHIPVFGGVVKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAARK
ccccccccccccccccccccccCEEEEcccccccccccccccccEEcccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccHHccccccccccccccccccccccccccccccccccHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccEEEEEEcccccccccccEEEEEEEccccccccccccccccccccEEEEEEECccccEEEEEEEEcccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccEEEEEEEccccccccccEEEEEEECccccccccccccccccccccccEEEEEEEcccccEEEEEEEEcccccccccccccccccEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCEEEccccccccccEEEEEEcccccccccccEEEEEccccccccccccccccccccccccccEEEEEECccccEEccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHccccEEEEcccccccccccccccCEEEEEccccEEEEEEEEEEccEEEEEECccccccccccccccccHHHHHHHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHcccccccccHHHHHHccccccccccccEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEECccHHHHHHHHcccEEEcccccccccHHHHHHccccccccccccccccccccccccccHHHHcccccccCEEcccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHc
******************QERSLFKFKPSTGSSAFVKTTQFCFFFIEFAYLLIFYLKSHYF************************************************************************************************************************************************************************************************LADENFLRQKKIFVYPQVVKPDQDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNIYENNDQKDFCIAVEGLMDALAFEDFLLEEKRREQ*****************************************************RSVDNVWYIEPSEFKGEDLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVYDNNSRQDFHAIVPKSIPDELYWVEEERQTFR*******************************LKRFLLSQKHIVYTDPLDVQAGTTVTVFYNPANTVLNGKSEIWFRCSFNHWTHRMGILPPQKMVPVKYSTHVKTTVKVPLDAYTMDFVFSEWEDGGTFDNKNGMDYHIPVFGGVVKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAARK
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAAAGLQLQSSVSCRAVSQERSLFKFKPSTGSSAFVKTTQFCFFFIEFAYLLIFYLKSHYFSRRRQRGVSTPRTKDTGSKGFTPKTPVGTGIQKRDQKKNGDKEGSGTPVSGEYGGPTKKTPAPTNGVEKKPAVELSRDNQIGEQNVDITEQESENIPRTNKDLISAKSSQVVGNGSVGRIDDVFQKKETTPKSDIKNVTEKSTSKRKHLNLNKSNDSVRDESIKADIKASEDASLKLKKEVEENLRKQEIERLADENFLRQKKIFVYPQVVKPDQDIEVFLNRSLSTLKNEPDVLIMGAFNDWRWKSFTFRLNKTHLKGDWWSCQVHVPKEAFKIDFVFFNGQNIYENNDQKDFCIAVEGLMDALAFxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAARSVDNVWYIEPSEFKGEDLVRLYYNKQSSSLAHAKELWIHGGYNNWKDGLSIVARLVSSERTDGDWWYAKVSVPDQALVLDWVFADGPPGKAIVYDNNSRQDFHAIVPKSIPDELYWxxxxxxxxxxxxxxxxxxxxxARAKAEKTAHMKAETKERTLKRFLLSQKHIVYTDPLDVQAGTTVTVFYNPANTVLNGKSEIWFRCSFNHWTHRMGILPPQKMVPVKYSTHVKTTVKVPLDAYTMDFVFSEWEDGGTFDNKNGMDYHIPVFGGVVKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRTVQDLNHNVDIILPKYDCLKFSDVKDLGYNRSYHWGGTEIKVWFGKVEGLSVYFLEPQNGFFSKGCVYGCNNDKERFAFFCHAALEFLLQGGFHPDIIHCHDWSSAPVAWLFKDHYVHYGLSKARIVFTIHNLEFGTHHIGKAMTYADKATTVSHTYSKEVAGDPAIAPHLHKFYGILNGIDQDMWDPFNDKFIPVSYTSENLVEGKRAAKEALQQKVGLRKSDLPLVGIITRLTHQKGIHLIKHAIWRTLDRGGQVVLLGSAPDPRIQNDFVNLANELHSSHADRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLVAMRYGSIPVVRKTGGLYDTVFDVDHDKERAQALDLEPNGFSFDGADIAGVDYALNSIHVSSFHTTSRLYIYEDLEGQPLMIPFKQKQSSMTYDSFRAISAYYDGREWLNSLCKTVMEQDWSWNRPALDYMELYRAARK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Starch synthase 3, chloroplastic/amyloplastic Involved in the synthesis of glycan chains within amylopectin in leaves. May play a regulatory role in the control of starch accumulation in plastids.probableF4IAG2
Soluble starch synthase 3, chloroplastic/amyloplastic May account for most of the soluble starch synthase activity in the tubers. Contributes only a tiny percentage of the granule-bound activity, but may also contribute to the deposition of transient starch in chloroplasts of leaves.probableQ43846

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.4.-.-Glycosyltransferases.probable
2.4.1.-Hexosyltransferases.probable
2.4.1.21Starch synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1RZU, chain A
Confidence level:very confident
Coverage over the Query: 710-1115,1156-1198
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Template: 2LAA, chain A
Confidence level:confident
Coverage over the Query: 274-360
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Template: 2LAA, chain A
Confidence level:confident
Coverage over the Query: 449-541
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Template: 3COP, chain A
Confidence level:confident
Coverage over the Query: 710-1152
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Template: 2J43, chain A
Confidence level:probable
Coverage over the Query: 275-370,435-521
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Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 374-446
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Template: 3LVG, chain D
Confidence level:probable
Coverage over the Query: 374-446
View the alignment between query and template
View the model in PyMOL