BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046065
(164 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 98/167 (58%), Gaps = 6/167 (3%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEY 58
G L DG ++AVK+L ++ TQG E +F+ EV + + H NL+R+ GFC+ E +L+Y Y
Sbjct: 49 GRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 108
Query: 59 MPKRSLDYFLFD-PIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD 117
M S+ L + P LD KR I G +GL YL ++ IIHRD+K +NILLD
Sbjct: 109 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168
Query: 118 EDLKPKISDFGLARIL---RKMILKQIQIELGYIPPEYVGRGVYYKK 161
E+ + + DFGLA+++ + ++ +G+I PEY+ G +K
Sbjct: 169 EEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 6/167 (3%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEY 58
G L DG ++AVK+L ++ QG E +F+ EV + + H NL+R+ GFC+ E +L+Y Y
Sbjct: 57 GRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPY 116
Query: 59 MPKRSLDYFLFD-PIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD 117
M S+ L + P LD KR I G +GL YL ++ IIHRD+K +NILLD
Sbjct: 117 MANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 176
Query: 118 EDLKPKISDFGLARIL---RKMILKQIQIELGYIPPEYVGRGVYYKK 161
E+ + + DFGLA+++ + ++ +G+I PEY+ G +K
Sbjct: 177 EEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEK 223
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 97/162 (59%), Gaps = 9/162 (5%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYM 59
GVL DG +A+K+ + +S+QG EEF+ E+ + +H +L+ +GFC E E +LIY+YM
Sbjct: 58 GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117
Query: 60 PKRSLDYFLF-DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L L+ + + + ++R+ I G +GL YL IIHRD+K NILLDE
Sbjct: 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDE 174
Query: 119 DLKPKISDFGLAR----ILRKMILKQIQIELGYIPPEYVGRG 156
+ PKI+DFG+++ + + + ++ LGYI PEY +G
Sbjct: 175 NFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKG 216
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 97/162 (59%), Gaps = 9/162 (5%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYM 59
GVL DG +A+K+ + +S+QG EEF+ E+ + +H +L+ +GFC E E +LIY+YM
Sbjct: 58 GVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117
Query: 60 PKRSLDYFLF-DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L L+ + + + ++R+ I G +GL YL IIHRD+K NILLDE
Sbjct: 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDE 174
Query: 119 DLKPKISDFGLAR----ILRKMILKQIQIELGYIPPEYVGRG 156
+ PKI+DFG+++ + + + ++ LGYI PEY +G
Sbjct: 175 NFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKG 216
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 5 DGQIIAVKKLSKKSTQGFEE----FKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYM 59
+ +AVKKL+ EE F E+ + AK QH NL+ + GF + + L+Y YM
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 60 PKRSLDYFLFDPIRMLI----LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
P SL D + L L R I +G G+ +L E IHRD+K +NIL
Sbjct: 113 PNGSL----LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANIL 165
Query: 116 LDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPE 151
LDE KISDFGLAR K ++ +I Y+ PE
Sbjct: 166 LDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE 205
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 5 DGQIIAVKKLSKKSTQGFEE----FKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYM 59
+ +AVKKL+ EE F E+ + AK QH NL+ + GF + + L+Y YM
Sbjct: 53 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 60 PKRSLDYFLFDPIRMLI----LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
P SL D + L L R I +G G+ +L E IHRD+K +NIL
Sbjct: 113 PNGSL----LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANIL 165
Query: 116 LDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPE 151
LDE KISDFGLAR K ++ +I Y+ PE
Sbjct: 166 LDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE 205
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 5 DGQIIAVKKLSKKSTQGFEE----FKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYM 59
+ +AVKKL+ EE F E+ + AK QH NL+ + GF + + L+Y YM
Sbjct: 47 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 60 PKRSLDYFLFDPIRMLI----LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
P SL D + L L R I +G G+ +L E IHRD+K +NIL
Sbjct: 107 PNGSL----LDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANIL 159
Query: 116 LDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPE 151
LDE KISDFGLAR K ++ +I Y+ PE
Sbjct: 160 LDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE 199
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 76.3 bits (186), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 5 DGQIIAVKKLSKKSTQGFEE----FKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYM 59
+ +AVKKL+ EE F E+ + AK QH NL+ + GF + + L+Y Y
Sbjct: 44 NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 60 PKRSLDYFLFDPIRML----ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
P SL D + L L R I +G G+ +L E IHRD+K +NIL
Sbjct: 104 PNGSL----LDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANIL 156
Query: 116 LDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPE 151
LDE KISDFGLAR K + +I Y PE
Sbjct: 157 LDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE 196
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGLAR+L
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA 204
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFT 228
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
D ++AVK L S ++F E L LQH ++++ G C+E ++++EYM
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 64 LDYFL--FDPIRMLI--------LDCKKRVHIIKGIIQGLLYL-QEYFRLTIIHRDLKVS 112
L+ FL P +L+ L + +HI + I G++YL ++F +HRDL
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHF----VHRDLATR 157
Query: 113 NILLDEDLKPKISDFGLARILRKM----ILKQIQIELGYIPPEYVGRGVYYKKFS 163
N L+ E+L KI DFG++R + + + + ++PPE + Y+KF+
Sbjct: 158 NCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE----SIMYRKFT 208
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFT 228
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 118
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 119 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFT 199
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 135
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 136 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 193 YTTRGGKIPIRWTSPEAIAYRKFT 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFT 228
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFT 228
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFT 228
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFT 228
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 145
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 146 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 203 YTTRGGKIPIRWTSPEAIAYRKFT 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ EYM SLD FL D +I
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI---- 147
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL R+L
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA 204
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFT 228
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 27/178 (15%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
D ++AVK L + ++F+ E L LQH ++++ G C + ++++EYM
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 64 LDYFL--FDPIRMLILDCKKR-----------VHIIKGIIQGLLYL-QEYFRLTIIHRDL 109
L+ FL P M+++D + R +HI I G++YL ++F +HRDL
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF----VHRDL 159
Query: 110 KVSNILLDEDLKPKISDFGLARILRKM----ILKQIQIELGYIPPEYVGRGVYYKKFS 163
N L+ +L KI DFG++R + + + + ++PPE + Y+KF+
Sbjct: 160 ATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPE----SIMYRKFT 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K L T + +F +E + + H N+I + G + + M+I EYM SLD
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
Query: 67 FLF-DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
FL + R ++ + V +++GI G+ YL + ++ +HRDL NIL++ +L K+S
Sbjct: 120 FLRKNDGRFTVI---QLVGMLRGIGSGMKYLSD---MSAVHRDLAARNILVNSNLVCKVS 173
Query: 126 DFGLARILRKMILKQIQIELGYIPPEYVG-RGVYYKKFS 163
DFG++R+L G IP + + Y+KF+
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 212
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K L T + +F +E + + H N+I + G + + M+I EYM SLD
Sbjct: 39 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
Query: 67 FLF-DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
FL + R ++ + V +++GI G+ YL + ++ +HRDL NIL++ +L K+S
Sbjct: 99 FLRKNDGRFTVI---QLVGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVS 152
Query: 126 DFGLARILRKMILKQIQIELGYIPPEYVG-RGVYYKKFS 163
DFG++R+L G IP + + Y+KF+
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 191
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K L T + +F +E + + H N+I + G + + M+I EYM SLD
Sbjct: 45 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
Query: 67 FLF-DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
FL + R ++ + V +++GI G+ YL + ++ +HRDL NIL++ +L K+S
Sbjct: 105 FLRKNDGRFTVI---QLVGMLRGIGSGMKYLSD---MSYVHRDLAARNILVNSNLVCKVS 158
Query: 126 DFGLARILRKMILKQIQIELGYIPPEYVG-RGVYYKKFS 163
DFG++R+L G IP + + Y+KF+
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFT 197
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ E M SLD FL D +I
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---- 147
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFT 228
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K L T+ +F +E + + H N+IR+ G + M++ EYM SLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
FL + + V +++G+ G+ YL + L +HRDL N+L+D +L K+SD
Sbjct: 140 FLRTHDGQFTI--MQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 127 FGLARILRKMILKQIQIELGYIPPEYVG-RGVYYKKFS 163
FGL+R+L G IP + + ++ FS
Sbjct: 195 FGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFS 232
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ E M SLD FL D +I
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---- 118
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 119 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 176 YTTRGGKIPIRWTSPEAIAYRKFT 199
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Query: 7 QIIAVKKLSKKSTQ-GFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+A+K L T+ EF +E + + +H N+IR+ G + M++ E+M +L
Sbjct: 45 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 65 DYFL-FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
D FL + + ++ + V +++GI G+ YL E ++ +HRDL NIL++ +L K
Sbjct: 105 DSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCK 158
Query: 124 ISDFGLARILRKMILKQIQIEL--GYIPPEYVG-RGVYYKKFS 163
+SDFGL+R L + + G IP + + ++KF+
Sbjct: 159 VSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFT 201
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 11/144 (7%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL--FDPIRMLILDCK 80
+F E + + H N+IR+ G +++ M++ E M SLD FL D +I
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI---- 147
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQ 140
+ V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 148 QLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 141 IQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 205 YTTRGGKIPIRWTSPEAIAYRKFT 228
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K L T+ +F +E + + H N+IR+ G + M++ EYM SLD
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
FL + + V +++G+ G+ YL + L +HRDL N+L+D +L K+SD
Sbjct: 140 FLRTHDGQFTI--MQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSD 194
Query: 127 FGLARILRKMILKQIQIELGYIPPEYVG-RGVYYKKFS 163
FGL+R+L G IP + + ++ FS
Sbjct: 195 FGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS 232
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 40 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 97
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 98 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 153
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 154 GLARLIEDAEXTAREGAKFPIKWTAPEAINYGTF 187
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 35 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 92
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 93 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 148
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 149 GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 182
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 40 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 97
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 98 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 153
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 154 GLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 46 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 103
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 104 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 159
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 160 GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 193
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 45 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 102
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 103 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 158
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 159 GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 192
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 41 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 98
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 99 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 154
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 155 GLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 188
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 40 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 97
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 98 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 153
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 154 GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 187
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 40 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 97
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 98 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 153
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 154 GLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 187
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 49 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 106
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 107 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 162
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 163 GLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 196
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 42 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 99
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 100 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 155
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 156 GLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 189
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 48 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 105
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 106 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 161
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 162 GLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 195
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
D ++AVK L + S ++F+ E L LQH +++R G C E + ++++EYM
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 129
Query: 64 LDYFL--FDPIRMLI----------LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
L+ FL P L+ L + + + + G++YL L +HRDL
Sbjct: 130 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLAT 186
Query: 112 SNILLDEDLKPKISDFGLARILRKM----ILKQIQIELGYIPPEYVGRGVYYKKFS 163
N L+ + L KI DFG++R + + + + + ++PPE + Y+KF+
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE----SILYRKFT 238
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 46 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 103
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 104 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 159
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 160 GLARLIEDNEXTAREGAKFPIKWTAPEAINYGTF 193
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
D ++AVK L + S ++F+ E L LQH +++R G C E + ++++EYM
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 100
Query: 64 LDYFL--FDPIRMLI----------LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
L+ FL P L+ L + + + + G++YL L +HRDL
Sbjct: 101 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLAT 157
Query: 112 SNILLDEDLKPKISDFGLARILRKM----ILKQIQIELGYIPPEYVGRGVYYKKFS 163
N L+ + L KI DFG++R + + + + + ++PPE + Y+KF+
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE----SILYRKFT 209
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 24/176 (13%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
D ++AVK L + S ++F+ E L LQH +++R G C E + ++++EYM
Sbjct: 47 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 106
Query: 64 LDYFL--FDPIRMLI----------LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
L+ FL P L+ L + + + + G++YL L +HRDL
Sbjct: 107 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLAT 163
Query: 112 SNILLDEDLKPKISDFGLARILRKM----ILKQIQIELGYIPPEYVGRGVYYKKFS 163
N L+ + L KI DFG++R + + + + + ++PPE + Y+KF+
Sbjct: 164 RNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPE----SILYRKFT 215
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 50 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 107
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHRDL+ +NIL+ + L KI+DF
Sbjct: 108 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF 163
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 164 GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 197
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 8/158 (5%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K L T+ +F E + + H N+IR+ G + + M+I EYM +LD
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
FL + + + V +++GI G+ YL + +HRDL NIL++ +L K+SD
Sbjct: 136 FLRE--KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSD 190
Query: 127 FGLARILRKMILKQIQIELGYIPPEYVG-RGVYYKKFS 163
FGL+R+L G IP + + Y+KF+
Sbjct: 191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFT 228
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 7 QIIAVKKLSKKSTQ-GFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+A+K L T+ EF +E + + +H N+IR+ G + M++ E+M +L
Sbjct: 43 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 102
Query: 65 DYFL-FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
D FL + + ++ + V +++GI G+ YL E ++ +HRDL NIL++ +L K
Sbjct: 103 DSFLRLNDGQFTVI---QLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCK 156
Query: 124 ISDFGLARILRK 135
+SDFGL+R L +
Sbjct: 157 VSDFGLSRFLEE 168
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYM 59
G + +AVK L K T + F E L LQH L+R+ + +E + +I EYM
Sbjct: 32 GYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYM 90
Query: 60 PKRSL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
K SL D+ D ++L K + I +G+ Y++ R IHRDL+ +N+L+ E
Sbjct: 91 AKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSE 145
Query: 119 DLKPKISDFGLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
L KI+DFGLAR++ + + + + PE + G +
Sbjct: 146 SLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 188
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+AVK L K+ + + F E L +LQH L+R+ + + TQE + +I EYM SL F
Sbjct: 36 VAVKSL-KQGSMSPDAFLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDF 93
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L P + L K + + I +G+ +++E IHR+L+ +NIL+ + L KI+DF
Sbjct: 94 LKTP-SGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANILVSDTLSCKIADF 149
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 150 GLARLIEDNEYTAREGAKFPIKWTAPEAINYGTF 183
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 19/148 (12%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL------FDPIRMLI 76
+F E + + H N+I + G +++ M++ EYM SLD FL F I++
Sbjct: 69 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL-- 126
Query: 77 LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKM 136
V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R+L
Sbjct: 127 ------VGMLRGISAGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 137 ILKQIQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + ++KF+
Sbjct: 178 PEAAYTTRGGKIPIRWTAPEAIAFRKFT 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.5 bits (158), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL D+
Sbjct: 294 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 352
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
+ + L L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DF
Sbjct: 353 KGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 407
Query: 128 GLARIL 133
GLAR++
Sbjct: 408 GLARLI 413
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 81/163 (49%), Gaps = 11/163 (6%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYM 59
G + +AVK L K T + F E L LQH L+R+ + +E + +I E+M
Sbjct: 31 GYYNNSTKVAVKTL-KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFM 89
Query: 60 PKRSL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
K SL D+ D ++L K + I +G+ Y++ R IHRDL+ +N+L+ E
Sbjct: 90 AKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSE 144
Query: 119 DLKPKISDFGLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
L KI+DFGLAR++ + + + + PE + G +
Sbjct: 145 SLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCF 187
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL D+
Sbjct: 35 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFL 93
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
+ + L L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DF
Sbjct: 94 KGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 148
Query: 128 GLARIL 133
GLAR++
Sbjct: 149 GLARLI 154
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL D+
Sbjct: 38 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 96
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
+ + L L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DF
Sbjct: 97 KGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 151
Query: 128 GLARIL 133
GLAR++
Sbjct: 152 GLARLI 157
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL D+
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 269
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
+ + L L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DF
Sbjct: 270 KGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 128 GLARIL 133
GLAR++
Sbjct: 325 GLARLI 330
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL D+
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 269
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
+ + L L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DF
Sbjct: 270 KGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 128 GLARIL 133
GLAR++
Sbjct: 325 GLARLI 330
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 22/166 (13%)
Query: 9 IAVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K L T+ +F +E + + H N+I + G ++ M+I E+M SLD
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 67 FL------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
FL F I++ V +++GI G+ YL + + +HRDL NIL++ +L
Sbjct: 124 FLRQNDGQFTVIQL--------VGMLRGIAAGMKYLAD---MNYVHRDLAARNILVNSNL 172
Query: 121 KPKISDFGLARILRKMILKQIQIEL--GYIPPEYVG-RGVYYKKFS 163
K+SDFGL+R L G IP + + Y+KF+
Sbjct: 173 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFT 218
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL FL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 103
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 104 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 159
Query: 129 LARIL 133
LAR++
Sbjct: 160 LARLI 164
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL FL
Sbjct: 34 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 92
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 93 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 148
Query: 129 LARIL 133
LAR++
Sbjct: 149 LARLI 153
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL FL
Sbjct: 36 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 94
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 95 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 150
Query: 129 LARIL 133
LAR++
Sbjct: 151 LARLI 155
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL D+
Sbjct: 211 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYMSKGSLLDFL 269
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
+ + L L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DF
Sbjct: 270 KGETGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 324
Query: 128 GLARIL 133
GLAR++
Sbjct: 325 GLARLI 330
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL FL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVCEYMSKGSLLDFL 103
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 104 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 159
Query: 129 LARIL 133
LAR++
Sbjct: 160 LARLI 164
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL FL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFL 103
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 104 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 159
Query: 129 LARIL 133
LAR++
Sbjct: 160 LARLI 164
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL FL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFL 103
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 104 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 159
Query: 129 LARIL 133
LAR++
Sbjct: 160 LARLI 164
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 26/177 (14%)
Query: 7 QIIAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
Q +A+K L K+ EEF++E ML A+LQH N++ + G + Q +I+ Y L
Sbjct: 40 QAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
Query: 65 DYFLF-----------DPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
FL D R + L+ VH++ I G+ YL + ++H+DL
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLAT 156
Query: 112 SNILLDEDLKPKISDFGLARILRKM----ILKQIQIELGYIPPEYVGRGVYYKKFSL 164
N+L+ + L KISD GL R + +L + + ++ PE + Y KFS+
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE----AIMYGKFSI 209
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL D+
Sbjct: 42 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFL 100
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
+ + L L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DF
Sbjct: 101 KGETGKYLRL--PQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 155
Query: 128 GLARIL 133
GLAR++
Sbjct: 156 GLARLI 161
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL D+
Sbjct: 42 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFL 100
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
+ + L L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DF
Sbjct: 101 KGETGKYLRL--PQLVDMSAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADF 155
Query: 128 GLARIL 133
GLAR++
Sbjct: 156 GLARLI 161
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 84/177 (47%), Gaps = 26/177 (14%)
Query: 7 QIIAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
Q +A+K L K+ EEF++E ML A+LQH N++ + G + Q +I+ Y L
Sbjct: 57 QAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116
Query: 65 DYFLF-----------DPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
FL D R + L+ VH++ I G+ YL + ++H+DL
Sbjct: 117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLAT 173
Query: 112 SNILLDEDLKPKISDFGLARILRKM----ILKQIQIELGYIPPEYVGRGVYYKKFSL 164
N+L+ + L KISD GL R + +L + + ++ PE + Y KFS+
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPE----AIMYGKFSI 226
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 102 SLRDYLQAHAER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 156 VKIGDFGLTKVL 167
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + K++H L+++ + + ++ EYM K SL FL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 103
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 104 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 159
Query: 129 LARIL 133
LAR++
Sbjct: 160 LARLI 164
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + KL+H L+++ + + ++ EYM K SL FL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 103
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL +NIL+ E+L K++DFG
Sbjct: 104 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFG 159
Query: 129 LARIL 133
LAR++
Sbjct: 160 LARLI 164
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 117 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 170
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 171 VKIGDFGLTKVL 182
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 117 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 170
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 171 VKIGDFGLTKVL 182
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 5/133 (3%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
G +A+K L K T E F E + KL+H L+++ + + ++ EYM
Sbjct: 28 GTWNGNTKVAIKTL-KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPIYIVTEYMN 86
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
K SL FL D L V + + G+ Y++ R+ IHRDL+ +NIL+ L
Sbjct: 87 KGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNGL 142
Query: 121 KPKISDFGLARIL 133
KI+DFGLAR++
Sbjct: 143 ICKIADFGLARLI 155
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 105 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 158
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 159 VKIGDFGLTKVL 170
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 130 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 183
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 184 VKIGDFGLTKVL 195
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 97 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 150
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 151 VKIGDFGLTKVL 162
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 102 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 156 VKIGDFGLTKVL 167
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 106 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 159
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 160 VKIGDFGLTKVL 171
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 153 VKIGDFGLTKVL 164
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 153 VKIGDFGLTKVL 164
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 104 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 157
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 158 VKIGDFGLTKVL 169
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 99 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 153 VKIGDFGLTKVL 164
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 103 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 156
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 157 VKIGDFGLTKVL 168
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHRDL NIL++ + +
Sbjct: 98 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 151
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 152 VKIGDFGLTKVL 163
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 96
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 97 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 147
Query: 122 PKISDFGLARILRKMI----LKQIQIELGYIPPEYV 153
KI DFGLA + + +Q+ + ++ PE +
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 119
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 120 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 170
Query: 122 PKISDFGLARILRKMI----LKQIQIELGYIPPEYV 153
KI DFGLA + + +Q+ + ++ PE +
Sbjct: 171 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 206
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + KL+H L+++ + + ++ EYM K L FL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGCLLDFL 103
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 104 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 159
Query: 129 LARIL 133
LAR++
Sbjct: 160 LARLI 164
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 60 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 118
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 119 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 169
Query: 122 PKISDFGLARILRKMI----LKQIQIELGYIPPEYV 153
KI DFGLA + + +Q+ + ++ PE +
Sbjct: 170 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 205
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K T E F E + KL+H L+++ + + ++ EYM K L FL
Sbjct: 45 VAIKTL-KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVMEYMSKGCLLDFL 103
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 104 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 159
Query: 129 LARIL 133
LAR++
Sbjct: 160 LARLI 164
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 38 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 96
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 97 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 147
Query: 122 PKISDFGLARILRKMI----LKQIQIELGYIPPEYV 153
KI DFGLA + + +Q+ + ++ PE +
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 35 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 93
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 94 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 144
Query: 122 PKISDFGLARILRKMI----LKQIQIELGYIPPEYV 153
KI DFGLA + + +Q+ + ++ PE +
Sbjct: 145 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 91
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 92 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 142
Query: 122 PKISDFGLARILRKMI----LKQIQIELGYIPPEYV 153
KI DFGLA + + +Q+ + ++ PE +
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ Q ++ ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLY 91
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 92 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 142
Query: 122 PKISDFGLARILRKMI----LKQIQIELGYIPPEYV 153
KI DFGLA + + +Q+ + ++ PE +
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 33 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 91
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 92 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 142
Query: 122 PKISDFGLA----RILRKMILKQIQIELGYIPPEYV 153
KI DFGLA R +Q+ + ++ PE +
Sbjct: 143 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 9 IAVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K L T+ +F +E + + H N+I + G ++ M+I E+M SLD
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 67 FL------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
FL F I++ V +++GI G+ YL + + +HR L NIL++ +L
Sbjct: 98 FLRQNDGQFTVIQL--------VGMLRGIAAGMKYLAD---MNYVHRALAARNILVNSNL 146
Query: 121 KPKISDFGLARILRKMILKQIQIEL--GYIPPEYVG-RGVYYKKFS 163
K+SDFGL+R L G IP + + Y+KF+
Sbjct: 147 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFT 192
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 61 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 119
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 120 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 170
Query: 122 PKISDFGLA----RILRKMILKQIQIELGYIPPEYV 153
KI DFGLA R +Q+ + ++ PE +
Sbjct: 171 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 21/156 (13%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 53 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 111
Query: 66 YFLFDPIRMLILDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ L I++ K K + I + QG+ YL +IIHRDLK +NI L EDL
Sbjct: 112 HHLH------IIETKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLT 162
Query: 122 PKISDFGLA----RILRKMILKQIQIELGYIPPEYV 153
KI DFGLA R +Q+ + ++ PE +
Sbjct: 163 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 198
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 87/183 (47%), Gaps = 34/183 (18%)
Query: 8 IIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
++AVK L ++++ + +F+ E L A+ + N++++ G C + L++EYM L+
Sbjct: 79 MVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLN 138
Query: 66 YFL--FDPIRMLI-------------------LDCKKRVHIIKGIIQGLLYLQEYFRLTI 104
FL P + L C +++ I + + G+ YL E
Sbjct: 139 EFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKF 195
Query: 105 IHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQ----IELGYIPPEYVGRGVYYK 160
+HRDL N L+ E++ KI+DFGL+R + + I + ++PPE ++Y
Sbjct: 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE----SIFYN 251
Query: 161 KFS 163
+++
Sbjct: 252 RYT 254
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI EY+P
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 63 SL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL DY R +D K + I +G+ YL IHR+L NIL++ + +
Sbjct: 100 SLRDYLQKHKER---IDHIKLLQYTSQICKGMEYLGTK---RYIHRNLATRNILVENENR 153
Query: 122 PKISDFGLARIL 133
KI DFGL ++L
Sbjct: 154 VKIGDFGLTKVL 165
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 72/148 (48%), Gaps = 19/148 (12%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFL------FDPIRMLI 76
+F E + + H N++ + G + M++ E+M +LD FL F I++
Sbjct: 90 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL-- 147
Query: 77 LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKM 136
V +++GI G+ YL + + +HRDL NIL++ +L K+SDFGL+R++
Sbjct: 148 ------VGMLRGIAAGMRYLAD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
Query: 137 ILKQIQIELGYIPPEYVG-RGVYYKKFS 163
G IP + + Y+KF+
Sbjct: 199 PEAVYTTTGGKIPVRWTAPEAIQYRKFT 226
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.1 bits (144), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 13/152 (8%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 37 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 95
Query: 66 YFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
+ L + KK + I + +G+ YL +IIHRDLK +NI L ED KI
Sbjct: 96 HHLH--ASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIG 150
Query: 126 DFGLARILRKMI----LKQIQIELGYIPPEYV 153
DFGLA + + +Q+ + ++ PE +
Sbjct: 151 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL 68
+A+K L K E F E + KL+H L+++ + + ++ EYM K SL FL
Sbjct: 212 VAIKTL-KPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 270
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFG 128
+ L + V + I G+ Y++ R+ +HRDL+ +NIL+ E+L K++DFG
Sbjct: 271 KGEMGKY-LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFG 326
Query: 129 LARIL 133
L R++
Sbjct: 327 LGRLI 331
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 13/152 (8%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ + Q ++ ++ SL
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQ-LAIVTQWCEGSSLY 107
Query: 66 YFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
+ L + KK + I + +G+ YL +IIHRDLK +NI L ED KI
Sbjct: 108 HHLH--ASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIG 162
Query: 126 DFGLA----RILRKMILKQIQIELGYIPPEYV 153
DFGLA R +Q+ + ++ PE +
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 20/137 (14%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPKR 62
G+++AVKKL + + +F+ E+ + LQH N+++ G C + LI E++P
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIK------GIIQGLLYLQEYFRLTIIHRDLKVSNILL 116
SL R + K+R+ IK I +G+ YL IHRDL NIL+
Sbjct: 102 SL--------REYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILV 150
Query: 117 DEDLKPKISDFGLARIL 133
+ + + KI DFGL ++L
Sbjct: 151 ENENRVKIGDFGLTKVL 167
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 9 IAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLN-LIRVGFCIETQEYMLIYEYMPKRSLD 65
+AVK L + + Q + FKNEV + K +H+N L+ +G+ Q ++ ++ SL
Sbjct: 49 VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-LAIVTQWCEGSSLY 107
Query: 66 YFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
+ L + KK + I + +G+ YL +IIHRDLK +NI L ED KI
Sbjct: 108 HHLH--ASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIG 162
Query: 126 DFGLA----RILRKMILKQIQIELGYIPPEYV 153
DFGLA R +Q+ + ++ PE +
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 5 DGQIIAVKKLS---KKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC-IETQEYMLIYEYMP 60
+ +++A+KK+S K+S + +++ EV KL+H N I+ C + L+ EY
Sbjct: 78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
+ D + ++ H G +QGL YL + +IHRD+K NILL E
Sbjct: 138 GSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHSH---NMIHRDVKAGNILLSEPG 191
Query: 121 KPKISDFGLARIL 133
K+ DFG A I+
Sbjct: 192 LVKLGDFGSASIM 204
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+AVK + K + E F E + LQH L+++ + + +I E+M K SL D+
Sbjct: 209 VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFL 267
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
D L K + I +G+ ++++ IHRDL+ +NIL+ L KI+DF
Sbjct: 268 KSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADF 322
Query: 128 GLARILRKMILKQIQIELGYIPPEYVGRGVY 158
GLAR+ K +K + PE + G +
Sbjct: 323 GLARVGAKFPIK-------WTAPEAINFGSF 346
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 5 DGQIIAVKKLS---KKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC-IETQEYMLIYEYMP 60
+ +++A+KK+S K+S + +++ EV KL+H N I+ C + L+ EY
Sbjct: 39 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 98
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
+ D + ++ H G +QGL YL + +IHRD+K NILL E
Sbjct: 99 GSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHSH---NMIHRDVKAGNILLSEPG 152
Query: 121 KPKISDFGLARIL 133
K+ DFG A I+
Sbjct: 153 LVKLGDFGSASIM 165
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
Query: 6 GQIIAVKKLSKKS--TQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKR 62
G +AVK L ++ + EF EV + +L+H N++ +G + ++ EY+ +
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
SL L LD ++R+ + + +G+ YL I+HRDLK N+L+D+
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTV 178
Query: 123 KISDFGLARI 132
K+ DFGL+R+
Sbjct: 179 KVCDFGLSRL 188
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 24/161 (14%)
Query: 13 KLSKKSTQGFEEFKNEVMLTAKLQH-LNLIRVGFCIETQEYMLIYEYMPKRSL------- 64
K+S KS +++FKNE+ + +++ L G E +IYEYM S+
Sbjct: 80 KISIKSK--YDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYF 137
Query: 65 -----DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
+Y F PI+ ++ C IIK ++ Y+ I HRD+K SNIL+D++
Sbjct: 138 FVLDKNYTCFIPIQ--VIKC-----IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKN 188
Query: 120 LKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYK 160
+ K+SDFG + + +K + ++PPE+ Y
Sbjct: 189 GRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYN 229
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 6 GQIIAVKKLSKKS---TQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPK 61
G +A+K + KK+ + +NEV + +L+H +++ + E Y+ L+ E
Sbjct: 36 GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
++ +L + ++ + + H + II G+LYL + I+HRDL +SN+LL ++
Sbjct: 96 GEMNRYLKNRVKPFSENEAR--HFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMN 150
Query: 122 PKISDFGLARILRKMILKQIQI--ELGYIPPEYVGRGVY 158
KI+DFGLA L+ K + YI PE R +
Sbjct: 151 IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAH 189
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+AVK + K + E F E + LQH L+++ + + +I E+M K SL D+
Sbjct: 215 VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFL 273
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
D L K + I +G+ ++++ IHRDL+ +NIL+ L KI+DF
Sbjct: 274 KSDEGSKQPL--PKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADF 328
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 329 GLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 362
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 56.6 bits (135), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSL-DYF 67
+AVK + K + E F E + LQH L+++ + + +I E+M K SL D+
Sbjct: 42 VAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFL 100
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
D L K + I +G+ ++++ IHRDL+ +NIL+ L KI+DF
Sbjct: 101 KSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADF 155
Query: 128 GLARILRK---MILKQIQIELGYIPPEYVGRGVY 158
GLAR++ + + + + PE + G +
Sbjct: 156 GLARVIEDNEYTAREGAKFPIKWTAPEAINFGSF 189
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 93/173 (53%), Gaps = 24/173 (13%)
Query: 3 LPDGQII----AVKKLSKKS-TQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ + A+K L++ + + EF +E ++ A + H +L+R+ G C+ + L+
Sbjct: 60 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVT 118
Query: 57 EYMPKRSLDYFLFD-----PIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+ MP L ++ + ++L+ C + I +G++YL+E ++HRDL
Sbjct: 119 QLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ-------IAKGMMYLEER---RLVHRDLAA 168
Query: 112 SNILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG-RGVYYKKFS 163
N+L+ KI+DFGLAR+L K+ + G +P +++ ++Y+KF+
Sbjct: 169 RNVLVKSPNHVKITDFGLARLLEG-DEKEYNADGGKMPIKWMALECIHYRKFT 220
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+A+K + ++ E+F E + KL H L+++ G C+E L++E+M L +
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L + + + + + + +G+ YL+E ++IHRDL N L+ E+ K+SDF
Sbjct: 93 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVIHRDLAARNCLVGENQVIKVSDF 147
Query: 128 GLARIL 133
G+ R +
Sbjct: 148 GMTRFV 153
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 22/135 (16%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL-D 65
+AVK L K+ T EEF E + +++H NL+++ G C + ++ EYMP +L D
Sbjct: 59 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLD 117
Query: 66 YFLFDPIRMLILDCKKR-------VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
Y + +C + +++ I + YL+ + IHRDL N L+ E
Sbjct: 118 Y---------LRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGE 165
Query: 119 DLKPKISDFGLARIL 133
+ K++DFGL+R++
Sbjct: 166 NHVVKVADFGLSRLM 180
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 6 GQIIAVKKLSKKS--TQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKR 62
G +AVK L ++ + EF EV + +L+H N++ +G + ++ EY+ +
Sbjct: 60 GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
SL L LD ++R+ + + +G+ YL I+HR+LK N+L+D+
Sbjct: 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTV 178
Query: 123 KISDFGLARILRKMILKQ 140
K+ DFGL+R+ L
Sbjct: 179 KVCDFGLSRLKASTFLSS 196
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 92/171 (53%), Gaps = 20/171 (11%)
Query: 3 LPDGQII----AVKKLSKKS-TQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ + A+K L++ + + EF +E ++ A + H +L+R+ G C+ + L+
Sbjct: 37 VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCL-SPTIQLVT 95
Query: 57 EYMPKRSLDYFLF---DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSN 113
+ MP L ++ D I +L ++ I +G++YL+E ++HRDL N
Sbjct: 96 QLMPHGCLLEYVHEHKDNIGSQLL-----LNWCVQIAKGMMYLEER---RLVHRDLAARN 147
Query: 114 ILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG-RGVYYKKFS 163
+L+ KI+DFGLAR+L K+ + G +P +++ ++Y+KF+
Sbjct: 148 VLVKSPNHVKITDFGLARLLEG-DEKEYNADGGKMPIKWMALECIHYRKFT 197
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + A L H N+++ G E L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 93 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+A+K + K+ + ++F E + KL H L+++ G C+E L++E+M L +
Sbjct: 54 VAIKTI-KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 112
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L + + + + + + +G+ YL+E +IHRDL N L+ E+ K+SDF
Sbjct: 113 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 167
Query: 128 GLARIL 133
G+ R +
Sbjct: 168 GMTRFV 173
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+A+K + ++ E+F E + KL H L+++ G C+E L++E+M L +
Sbjct: 34 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 92
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L + + + + + + +G+ YL+E +IHRDL N L+ E+ K+SDF
Sbjct: 93 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 147
Query: 128 GLARIL 133
G+ R +
Sbjct: 148 GMTRFV 153
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+A+K + ++ E+F E + KL H L+++ G C+E L++E+M L +
Sbjct: 32 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 90
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L + + + + + + +G+ YL+E +IHRDL N L+ E+ K+SDF
Sbjct: 91 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 145
Query: 128 GLARIL 133
G+ R +
Sbjct: 146 GMTRFV 151
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+A+K + ++ E+F E + KL H L+++ G C+E L++E+M L +
Sbjct: 37 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY 95
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L + + + + + + +G+ YL+E +IHRDL N L+ E+ K+SDF
Sbjct: 96 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 150
Query: 128 GLARIL 133
G+ R +
Sbjct: 151 GMTRFV 156
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 6 GQIIAVKKLSKKS----TQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMP 60
G +AVK +Q E + E L A L+H N+I + G C++ L+ E+
Sbjct: 30 GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89
Query: 61 KRSLDYFLFD---PIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL- 116
L+ L P +L V+ I +G+ YL + + IIHRDLK SNIL+
Sbjct: 90 GGPLNRVLSGKRIPPDIL-------VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL 142
Query: 117 ----DEDLKP---KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYK 160
+ DL KI+DFGLAR + ++ PE + ++ K
Sbjct: 143 QKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSK 193
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 17/135 (12%)
Query: 6 GQIIAVKKL-SKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIE---TQEYMLIYEYMPK 61
G+++AVK L + Q +K E+ + L H ++I+ C E L+ EY+P
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 62 RSL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYL--QEYFRLTIIHRDLKVSNILLDE 118
SL DY I + L + + I +G+ YL Q Y IHRDL N+LLD
Sbjct: 120 GSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQHY-----IHRDLAARNVLLDN 169
Query: 119 DLKPKISDFGLARIL 133
D KI DFGLA+ +
Sbjct: 170 DRLVKIGDFGLAKAV 184
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 45 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 104 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 127 FGLARIL---RKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 160 FGLSRLMTGDTXTAHAGAKFPIKWTAPESLA----YNKFSI 196
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 84/162 (51%), Gaps = 14/162 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEE-FKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRS 63
G++ AVK + KK+ +G E +NE+ + K++H N++ + E+ ++ L+ + +
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 64 LDYFLFDPI-RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DED 119
L FD I K +I+ ++ + YL R+ I+HRDLK N+L DE+
Sbjct: 107 L----FDRIVEKGFYTEKDASTLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEE 159
Query: 120 LKPKISDFGLARILRKM-ILKQIQIELGYIPPEYVGRGVYYK 160
K ISDFGL+++ K ++ GY+ PE + + Y K
Sbjct: 160 SKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSK 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDY 66
+AVK L + ++ E +F E ++ +KL H N++R +G +++ ++ E M L
Sbjct: 64 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
Query: 67 FLFD-------PIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD-- 117
FL + P + +LD +H+ + I G YL+E IHRD+ N LL
Sbjct: 124 FLRETRPRPSQPSSLAMLDL---LHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 177
Query: 118 -EDLKPKISDFGLAR-ILRKMILKQ---IQIELGYIPPEYVGRGVYYKK 161
KI DFG+AR I R ++ + + ++PPE G++ K
Sbjct: 178 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 226
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 45 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 104 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 160 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 196
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 41 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 99
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 100 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 155
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 156 FGLSRLMTGDTYTAPAGAKFPIKWTAPESLA----YNKFSI 192
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 40 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 99 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 191
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDY 66
+AVK L + ++ E +F E ++ +KL H N++R +G +++ ++ E M L
Sbjct: 78 VAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
Query: 67 FLFD-------PIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL--- 116
FL + P + +LD +H+ + I G YL+E IHRD+ N LL
Sbjct: 138 FLRETRPRPSQPSSLAMLD---LLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCP 191
Query: 117 DEDLKPKISDFGLAR-ILRKMILKQ---IQIELGYIPPEYVGRGVYYKK 161
KI DFG+AR I R ++ + + ++PPE G++ K
Sbjct: 192 GPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSK 240
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 93 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 187
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 45 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 104 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 160 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 196
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 40 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 99 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 191
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 44 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 102
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 103 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 158
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 159 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 195
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 42 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 101 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 157 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 193
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 42 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 101 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 157 FGLSRLMTGDTYTAPAGAKFPIKWTAPESLA----YNKFSI 193
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 42 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 101 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 157 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 193
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+A+K + ++ E+F E + KL H L+++ G C+E L+ E+M L +
Sbjct: 35 VAIKTI-REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDY 93
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L + + + + + + +G+ YL+E +IHRDL N L+ E+ K+SDF
Sbjct: 94 L--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDF 148
Query: 128 GLARIL 133
G+ R +
Sbjct: 149 GMTRFV 154
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYM-LIYEYMPKRS 63
G +AVK + +T + F E + +L+H NL+++ G +E + + ++ EYM K S
Sbjct: 35 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 92
Query: 64 L-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L DY +L DC + + + + + YL+ +HRDL N+L+ ED
Sbjct: 93 LVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVA 147
Query: 123 KISDFGLAR 131
K+SDFGL +
Sbjct: 148 KVSDFGLTK 156
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 38 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 97 YLRECNRQEV-SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 127 FGLARILRKMILKQ---IQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 153 FGLSRLMTGDTFTAHAGAKFPIKWTAPESLA----YNKFSI 189
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAE 186
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 41 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 99
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 100 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 155
Query: 127 FGLARIL---RKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 156 FGLSRLMTGDTXTAHAGAKFPIKWTAPESLA----YNKFSI 192
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 53 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 111
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 112 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 167
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 168 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 204
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 9 IAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDY 66
+AVK K+ + + F+ F+NEV + K +H+N++ + ++ ++ SL
Sbjct: 61 VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYK 120
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L ++ + + I + QG+ YL IIHRD+K +NI L E L KI D
Sbjct: 121 HLH--VQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGD 175
Query: 127 FGLARI-LRKMILKQIQIELG---YIPPEYV 153
FGLA + R +Q++ G ++ PE +
Sbjct: 176 FGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.9 bits (128), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +AVK + K ++ ++ EV + L H N++++ IET++ + L+ EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L RM + + + + I+ + Y + F I+HRDLK N+LLD D+
Sbjct: 99 EVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNI 152
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 153 KIADFGFSN 161
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYM-LIYEYMPKRS 63
G +AVK + +T + F E + +L+H NL+++ G +E + + ++ EYM K S
Sbjct: 44 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101
Query: 64 L-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L DY +L DC + + + + + YL+ +HRDL N+L+ ED
Sbjct: 102 LVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVA 156
Query: 123 KISDFGLAR 131
K+SDFGL +
Sbjct: 157 KVSDFGLTK 165
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +AVK + K ++ ++ EV + L H N++++ IET++ + L+ EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L RM + + + + I+ + Y + F I+HRDLK N+LLD D+
Sbjct: 99 EVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNI 152
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 153 KIADFGFSN 161
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +AVK + K ++ ++ EV + L H N++++ IET++ + L+ EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L RM + + + + I+ + Y + F I+HRDLK N+LLD D+
Sbjct: 99 EVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNI 152
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 153 KIADFGFSN 161
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 6 GQIIAVKKL-SKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQ---EYMLIYEYMPK 61
G+++AVK L + Q +K E+ + L H ++I+ C E Q L+ EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 62 RSL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
SL DY I + L + + I +G+ YL IHR+L N+LLD D
Sbjct: 103 GSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHSQH---YIHRNLAARNVLLDNDR 154
Query: 121 KPKISDFGLARIL 133
KI DFGLA+ +
Sbjct: 155 LVKIGDFGLAKAV 167
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYM-LIYEYMPKRS 63
G +AVK + +T + F E + +L+H NL+++ G +E + + ++ EYM K S
Sbjct: 29 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 86
Query: 64 L-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L DY +L DC + + + + + YL+ +HRDL N+L+ ED
Sbjct: 87 LVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVA 141
Query: 123 KISDFGLAR 131
K+SDFGL +
Sbjct: 142 KVSDFGLTK 150
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 45 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 103
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 104 YLRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 160 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 196
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 38 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 97 YLRECNRQEV-SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 127 FGLARIL---RKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 153 FGLSRLMTGDTXTAHAGAKFPIKWTAPESLA----YNKFSI 189
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 93 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 93 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 6 GQIIAVKKL-SKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQ---EYMLIYEYMPK 61
G+++AVK L + Q +K E+ + L H ++I+ C E Q L+ EY+P
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 62 RSL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
SL DY I + L + + I +G+ YL IHR+L N+LLD D
Sbjct: 103 GSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQH---YIHRNLAARNVLLDNDR 154
Query: 121 KPKISDFGLARIL 133
KI DFGLA+ +
Sbjct: 155 LVKIGDFGLAKAV 167
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 93 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 93 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 40 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 99 YLRECNRQEV-SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 191
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 93 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 33 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 93 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 146
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYM-LIYEYMPKRS 63
G +AVK + +T + F E + +L+H NL+++ G +E + + ++ EYM K S
Sbjct: 216 GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273
Query: 64 L-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L DY +L DC + + + + + YL+ +HRDL N+L+ ED
Sbjct: 274 LVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVA 328
Query: 123 KISDFGLAR 131
K+SDFGL +
Sbjct: 329 KVSDFGLTK 337
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 45 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 104 YLRECNRQEV-SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 160 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 196
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 31 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 90
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 91 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 144
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 145 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 185
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 40 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 99 YLRECNRQEV-SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 191
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 7 QIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+++A+K ++KK+ +G E +NE+ + K++H N++ + E+ ++ LI + + L
Sbjct: 44 KLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 65 DYFLFDPI-RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL---LDEDL 120
FD I + +I ++ + YL + L I+HRDLK N+L LDED
Sbjct: 104 ----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDS 156
Query: 121 KPKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVYYK 160
K ISDFGL+++ +L GY+ PE + + Y K
Sbjct: 157 KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 12/161 (7%)
Query: 7 QIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+ +AVK + K++ E K E+ + L H N+++ G E L EY L
Sbjct: 32 EAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ I M D ++ H ++ G++YL + I HRD+K N+LLDE KI
Sbjct: 92 FDRIEPDIGMPEPDAQRFFH---QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKI 145
Query: 125 SDFGLARIL----RKMILKQIQIELGYIPPEYVGRGVYYKK 161
SDFGLA + R+ +L ++ L Y+ PE + R ++ +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.1 bits (126), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 38 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 96
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 97 YLRECNRQEV-SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 127 FGLARIL---RKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 153 FGLSRLMTGDTXTAHAGAKFPIKWTAPESLA----YNKFSI 189
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 40 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 99 YLRECNRQEV-SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 191
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +AV+ + K ++ ++ EV + L H N++++ IET++ + L+ EY
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L RM + + + + I+ + Y + F I+HRDLK N+LLD D+
Sbjct: 99 EVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNI 152
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 153 KIADFGFSN 161
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 40 TVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
+L + R + +++ I + YL+ + IHRDL N L+ E+ K++D
Sbjct: 99 YLRECNRQEV-SAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 127 FGLARILRK---MILKQIQIELGYIPPEYVGRGVYYKKFSL 164
FGL+R++ + + + PE + Y KFS+
Sbjct: 155 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLA----YNKFSI 191
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 68/129 (52%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +AV+ + K ++ ++ EV + L H N++++ IET++ + L+ EY
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 98
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L RM + + + + I+ + Y + F I+HRDLK N+LLD D+
Sbjct: 99 EVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNI 152
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 153 KIADFGFSN 161
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
G+ +AVK + + Q E NEV++ QH N++ + + +E ++ E++ +L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
D + + L+ ++ + + ++Q L YL +IHRD+K +ILL D + K+
Sbjct: 130 T----DIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKL 182
Query: 125 SDFGLARILRKMILKQIQIELG---YIPPEYVGRGVYYKKFSL 164
SDFG + K + K+ + +G ++ PE + R +Y + +
Sbjct: 183 SDFGFCAQISKDVPKRKXL-VGTPYWMAPEVISRSLYATEVDI 224
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L +
Sbjct: 287 VAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L + R + + +++ I + YL+ + IHR+L N L+ E+ K++DF
Sbjct: 346 LRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADF 401
Query: 128 GLARIL 133
GL+R++
Sbjct: 402 GLSRLM 407
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.8 bits (125), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L +
Sbjct: 245 VAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDF 127
L + R + + +++ I + YL+ + IHR+L N L+ E+ K++DF
Sbjct: 304 LRECNRQEV-NAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADF 359
Query: 128 GLARIL 133
GL+R++
Sbjct: 360 GLSRLM 365
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 17/138 (12%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR--VGFCIETQ----EYMLIYEY 58
D + +AVK S + Q F KN + ++H N+ R VG T EY+L+ EY
Sbjct: 35 DERPVAVKVFSFANRQNFINEKN-IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ------EYFRLTIIHRDLKVS 112
P SL +L + C+ + + +GL YL ++++ I HRDL
Sbjct: 94 YPNGSLXKYLSLHTSDWVSSCR----LAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSR 149
Query: 113 NILLDEDLKPKISDFGLA 130
N+L+ D ISDFGL+
Sbjct: 150 NVLVKNDGTCVISDFGLS 167
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 9 IAVKKL---SKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQE-YMLIYEYMPKRSL 64
+A+K + ++ + + F+ EV +++L H N++ + E + Y L+ EY+ +L
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTL 98
Query: 65 DYFL--FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
++ P L ++ I+ G+ + + + I+HRD+K NIL+D +
Sbjct: 99 SEYIESHGP-----LSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTL 150
Query: 123 KISDFGLARILRKMILKQIQIELG---YIPPE 151
KI DFG+A+ L + L Q LG Y PE
Sbjct: 151 KIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
GQ K+ K+ + +EF E KL H L++ G C + ++ EY+ L
Sbjct: 31 GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+L + L + + + + + +G+ +L+ + IHRDL N L+D DL K+
Sbjct: 91 LNYLRSHGKGL--EPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKV 145
Query: 125 SDFGLAR 131
SDFG+ R
Sbjct: 146 SDFGMTR 152
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.0 bits (123), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 20/133 (15%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+AVK L K+ T EEF E + +++H NL+++ G C + +I E+M +L
Sbjct: 248 VAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL--- 303
Query: 68 LFDPIRMLILDCKKR-------VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
D +R +C ++ +++ I + YL+ + IHR+L N L+ E+
Sbjct: 304 -LDYLR----ECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENH 355
Query: 121 KPKISDFGLARIL 133
K++DFGL+R++
Sbjct: 356 LVKVADFGLSRLM 368
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 7 QIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+++A+K ++K++ +G E +NE+ + K++H N++ + E+ ++ LI + + L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 65 DYFLFDPI-RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL---LDEDL 120
FD I + +I ++ + YL + L I+HRDLK N+L LDED
Sbjct: 104 ----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDS 156
Query: 121 KPKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVYYK 160
K ISDFGL+++ +L GY+ PE + + Y K
Sbjct: 157 KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 7 QIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+++A+K ++K++ +G E +NE+ + K++H N++ + E+ ++ LI + + L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 65 DYFLFDPI-RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL---LDEDL 120
FD I + +I ++ + YL + L I+HRDLK N+L LDED
Sbjct: 104 ----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDS 156
Query: 121 KPKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVYYK 160
K ISDFGL+++ +L GY+ PE + + Y K
Sbjct: 157 KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 7 QIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLD 65
+II K L+K QG + E+ L+H ++I++ I+++ E +++ EY D
Sbjct: 39 KIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 96
Query: 66 YFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
Y ++ + ++ + II + Y R I+HRDLK N+LLDE L KI+
Sbjct: 97 YI----VQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIA 149
Query: 126 DFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
DFGL+ I+ LK Y PE + +Y
Sbjct: 150 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 183
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 14/161 (8%)
Query: 7 QIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+++A+K ++K++ +G E +NE+ + K++H N++ + E+ ++ LI + + L
Sbjct: 44 KLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL 103
Query: 65 DYFLFDPI-RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL---LDEDL 120
FD I + +I ++ + YL + L I+HRDLK N+L LDED
Sbjct: 104 ----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDS 156
Query: 121 KPKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVYYK 160
K ISDFGL+++ +L GY+ PE + + Y K
Sbjct: 157 KIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR---VGFCIETQEYMLIYEYMPKR 62
G ++AVK+L +F+ E+ + L +++ V + Q L+ EY+P
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 63 SLDYFL------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL 116
L FL D R+L+ + I +G+ YL +HRDL NIL+
Sbjct: 100 CLRDFLQRHRARLDASRLLLYSSQ--------ICKGMEYLGSR---RCVHRDLAARNILV 148
Query: 117 DEDLKPKISDFGLARIL 133
+ + KI+DFGLA++L
Sbjct: 149 ESEAHVKIADFGLAKLL 165
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR---VGFCIETQEYMLIYEYMPKR 62
G ++AVK+L +F+ E+ + L +++ V + Q L+ EY+P
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 63 SLDYFL------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL 116
L FL D R+L+ + I +G+ YL +HRDL NIL+
Sbjct: 99 CLRDFLQRHRARLDASRLLLYSSQ--------ICKGMEYLGSR---RCVHRDLAARNILV 147
Query: 117 DEDLKPKISDFGLARIL 133
+ + KI+DFGLA++L
Sbjct: 148 ESEAHVKIADFGLAKLL 164
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 7 QIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLD 65
+II K L+K QG + E+ L+H ++I++ I+++ E +++ EY D
Sbjct: 35 KIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 92
Query: 66 YFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
Y ++ + ++ + II + Y R I+HRDLK N+LLDE L KI+
Sbjct: 93 YI----VQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIA 145
Query: 126 DFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
DFGL+ I+ LK Y PE + +Y
Sbjct: 146 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 179
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 7 QIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLD 65
+II K L+K QG + E+ L+H ++I++ I+++ E +++ EY D
Sbjct: 45 KIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 102
Query: 66 YFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
Y ++ + ++ + II + Y R I+HRDLK N+LLDE L KI+
Sbjct: 103 YI----VQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIA 155
Query: 126 DFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
DFGL+ I+ LK Y PE + +Y
Sbjct: 156 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 189
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 7 QIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLD 65
+II K L+K QG + E+ L+H ++I++ I+++ E +++ EY D
Sbjct: 44 KIINKKVLAKSDMQG--RIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD 101
Query: 66 YFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
Y ++ + ++ + II + Y R I+HRDLK N+LLDE L KI+
Sbjct: 102 YI----VQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIA 154
Query: 126 DFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
DFGL+ I+ LK Y PE + +Y
Sbjct: 155 DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY 188
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR---VGFCIETQEYMLIYEYMPKR 62
G ++AVK+L +F+ E+ + L +++ V + Q L+ EY+P
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 63 SLDYFL------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL 116
L FL D R+L+ + I +G+ YL +HRDL NIL+
Sbjct: 112 CLRDFLQRHRARLDASRLLLYSSQ--------ICKGMEYLGSR---RCVHRDLAARNILV 160
Query: 117 DEDLKPKISDFGLARIL 133
+ + KI+DFGLA++L
Sbjct: 161 ESEAHVKIADFGLAKLL 177
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 72/132 (54%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS---KKSTQGFEEFKNEVMLTAKLQH---LNLIRVGFCIETQEYMLIYEYM 59
G+++AVKK+ + ST F+ ++LT H +NL+ V ++ L+++YM
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
+ L IR IL+ + +++ +I+ + YL ++HRD+K SNILL+ +
Sbjct: 94 -----ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAE 145
Query: 120 LKPKISDFGLAR 131
K++DFGL+R
Sbjct: 146 CHVKVADFGLSR 157
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIE-TQEYMLIYEYMPKRSL 64
G++ A+K + K +NE+ + K++H N++ + E T Y L+ + + L
Sbjct: 34 GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL 93
Query: 65 DYFLFDPI-RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDL 120
FD I + K +I+ ++ + YL E I+HRDLK N+L +E+
Sbjct: 94 ----FDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENS 146
Query: 121 KPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYK 160
K I+DFGL+++ + I+ GY+ PE + + Y K
Sbjct: 147 KIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSK 186
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 16/139 (11%)
Query: 5 DGQIIAVKKLSKKSTQG-------FEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE 57
D ++A+K L ++G F+EF+ EV + + L H N++++ + + ++ E
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL-YGLMHNPPRMVME 101
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL-- 115
++P L + L D + K R+ + I G+ Y+Q I+HRDL+ NI
Sbjct: 102 FVPCGDLYHRLLDKAHPIKWSVKLRLML--DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQ 158
Query: 116 -LDEDLK--PKISDFGLAR 131
LDE+ K++DFGL++
Sbjct: 159 SLDENAPVCAKVADFGLSQ 177
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR---VGFCIETQEYMLIYEYMPKR 62
G ++AVK+L +F+ E+ + L +++ V + E L+ EY+P
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 63 SLDYFL------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL 116
L FL D R+L+ + I +G+ YL +HRDL NIL+
Sbjct: 96 CLRDFLQRHRARLDASRLLLYSSQ--------ICKGMEYLGSR---RCVHRDLAARNILV 144
Query: 117 DEDLKPKISDFGLARIL 133
+ + KI+DFGLA++L
Sbjct: 145 ESEAHVKIADFGLAKLL 161
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +AVK + K ++ ++ EV + L H N++++ IET++ + L+ EY
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGG 91
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L M + + + + I+ + Y + F I+HRDLK N+LLD D+
Sbjct: 92 EVFDYLVAHGWMKEKEARAK---FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADMNI 145
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 146 KIADFGFSN 154
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 6 GQIIAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPK 61
G+ +AVK L +S + K E+ + L H N+++ G C E LI E++P
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL +L P ++ K+++ I +G+ YL +HRDL N+L++ + +
Sbjct: 98 GSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQ 152
Query: 122 PKISDFGLARIL 133
KI DFGL + +
Sbjct: 153 VKIGDFGLTKAI 164
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Query: 6 GQIIAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRV-GFCIET--QEYMLIYEYMPK 61
G+ +AVK L +S + K E+ + L H N+++ G C E LI E++P
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
SL +L P ++ K+++ I +G+ YL +HRDL N+L++ + +
Sbjct: 110 GSLKEYL--PKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQ 164
Query: 122 PKISDFGLARIL 133
KI DFGL + +
Sbjct: 165 VKIGDFGLTKAI 176
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 23/134 (17%)
Query: 28 EVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYFLFDPIRMLILDCKK--RVH 84
EV L L+H N++ + I T++ + L++EY+ K ++ + DC +H
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKD---------LKQYLDDCGNIINMH 100
Query: 85 IIK----GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR---ILRKMI 137
+K +++GL Y R ++HRDLK N+L++E + K++DFGLAR I K
Sbjct: 101 NVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY 157
Query: 138 LKQIQIELGYIPPE 151
++ + L Y PP+
Sbjct: 158 DNEV-VTLWYRPPD 170
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +AVK + K ++ ++ EV + L H N++++ IET++ + L+ EY
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGG 98
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L R + + + + I+ + Y + F I+HRDLK N+LLD D
Sbjct: 99 EVFDYLVAHGRXKEKEARAK---FRQIVSAVQYCHQKF---IVHRDLKAENLLLDADXNI 152
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 153 KIADFGFSN 161
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 70/138 (50%), Gaps = 19/138 (13%)
Query: 23 EEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYFLFDPI--RMLILDC 79
EE NE+ L L H N+I++ E ++Y L+ E+ LF+ I R +C
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGE----LFEQIINRHKFDEC 146
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED---LKPKISDFGLARILRKM 136
+I+K I+ G+ YL ++ I+HRD+K NILL+ L KI DFGL+ K
Sbjct: 147 -DAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202
Query: 137 ILKQIQIELG---YIPPE 151
+++ LG YI PE
Sbjct: 203 Y--KLRDRLGTAYYIAPE 218
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +AVK + K + ++ EV + L H N++++ IET++ + L+ EY
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGG 99
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L RM + + + + I+ + Y + + I+HRDLK N+LLD D+
Sbjct: 100 EVFDYLVAHGRMKEKEARAK---FRQIVSAVQYCHQKY---IVHRDLKAENLLLDGDMNI 153
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 154 KIADFGFSN 162
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+II KKLS + F++ + E + KLQH N++R+ I+ + + L+++ + L
Sbjct: 59 AKIINTKKLSARD---FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
D + H I+ I++ + Y I+HR+LK N+LL K
Sbjct: 116 ---FEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 169
Query: 123 -KISDFGLA-RILRKMILKQIQIELGYIPPEYVGRGVYYK 160
K++DFGLA + GY+ PE + + Y K
Sbjct: 170 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 209
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 83/156 (53%), Gaps = 15/156 (9%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSL 64
G +A K + + + EE KNE+ + +L H NLI++ E++ + +L+ EY+ L
Sbjct: 114 GLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173
Query: 65 -DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL-LDEDLKP 122
D + + + LD + +K I +G+ ++ + + I+H DLK NIL ++ D K
Sbjct: 174 FDRIIDESYNLTELDT---ILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQ 227
Query: 123 -KISDFGLARILRKMILKQIQIELG---YIPPEYVG 154
KI DFGLAR R +++++ G ++ PE V
Sbjct: 228 IKIIDFGLAR--RYKPREKLKVNFGTPEFLAPEVVN 261
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+II KKLS + F++ + E + KLQH N++R+ I+ + + L+++ + L
Sbjct: 36 AKIINTKKLSARD---FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
D + H I+ I++ + Y I+HR+LK N+LL K
Sbjct: 93 ---FEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 146
Query: 123 -KISDFGLA-RILRKMILKQIQIELGYIPPEYVGRGVYYK 160
K++DFGLA + GY+ PE + + Y K
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 5 DGQIIAVKKLSKKSTQG-------FEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE 57
D ++A+K L ++G F+EF+ EV + + L H N++++ + + ++ E
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL-YGLMHNPPRMVME 101
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL-- 115
++P L + L D + K R+ + I G+ Y+Q I+HRDL+ NI
Sbjct: 102 FVPCGDLYHRLLDKAHPIKWSVKLRLML--DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQ 158
Query: 116 -LDEDLK--PKISDFGLAR 131
LDE+ K++DFG ++
Sbjct: 159 SLDENAPVCAKVADFGTSQ 177
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+II KKLS + F++ + E + KLQH N++R+ I+ + + L+++ + L
Sbjct: 36 AKIINTKKLSARD---FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
D + H I+ I++ + Y I+HR+LK N+LL K
Sbjct: 93 ---FEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 146
Query: 123 -KISDFGLA-RILRKMILKQIQIELGYIPPEYVGRGVYYK 160
K++DFGLA + GY+ PE + + Y K
Sbjct: 147 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 186
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+II KKLS + F++ + E + KLQH N++R+ I+ + + L+++ + L
Sbjct: 35 AKIINTKKLSARD---FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
D + H I+ I++ + Y I+HR+LK N+LL K
Sbjct: 92 ---FEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAA 145
Query: 123 -KISDFGLA-RILRKMILKQIQIELGYIPPEYVGRGVYYK 160
K++DFGLA + GY+ PE + + Y K
Sbjct: 146 VKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSK 185
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +A+K + K + ++ EV + L H N++++ IET++ + LI EY
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 96
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L RM + + + + I+ + Y + I+HRDLK N+LLD D+
Sbjct: 97 EVFDYLVAHGRMKEKEARSK---FRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNI 150
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 151 KIADFGFSN 159
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 20/146 (13%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFEEFKNEVMLTAKL-QHLNLIRVGFCIETQEYM-LIYEY 58
G+ D I +K+ + K +F E+ + KL H N+I + E + Y+ L EY
Sbjct: 40 GLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 97
Query: 59 MPKRSLDYFL-------FDPIRML------ILDCKKRVHIIKGIIQGLLYLQEYFRLTII 105
P +L FL DP + L ++ +H + +G+ YL + I
Sbjct: 98 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFI 154
Query: 106 HRDLKVSNILLDEDLKPKISDFGLAR 131
HRDL NIL+ E+ KI+DFGL+R
Sbjct: 155 HRDLAARNILVGENYVAKIADFGLSR 180
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ +A+K + K + ++ EV + L H N++++ IET++ + LI EY
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
+ +L RM + + + + I+ + Y + I+HRDLK N+LLD D+
Sbjct: 100 EVFDYLVAHGRMKEKEARSK---FRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNI 153
Query: 123 KISDFGLAR 131
KI+DFG +
Sbjct: 154 KIADFGFSN 162
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 6 GQIIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQ---EYMLIYEYMPK 61
G+++AVK L + Q ++ E+ + L H ++++ C E Q L+ EY+P
Sbjct: 37 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 96
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYL--QEYFRLTIIHRDLKVSNILLDED 119
SL +L P + L + + + I +G+ YL Q Y IHR L N+LLD D
Sbjct: 97 GSLRDYL--PRHCVGL--AQLLLFAQQICEGMAYLHAQHY-----IHRALAARNVLLDND 147
Query: 120 LKPKISDFGLARIL 133
KI DFGLA+ +
Sbjct: 148 RLVKIGDFGLAKAV 161
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 15/134 (11%)
Query: 6 GQIIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQ---EYMLIYEYMPK 61
G+++AVK L + Q ++ E+ + L H ++++ C E Q L+ EY+P
Sbjct: 38 GEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPL 97
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYL--QEYFRLTIIHRDLKVSNILLDED 119
SL +L P + L + + + I +G+ YL Q Y IHR L N+LLD D
Sbjct: 98 GSLRDYL--PRHCVGL--AQLLLFAQQICEGMAYLHAQHY-----IHRALAARNVLLDND 148
Query: 120 LKPKISDFGLARIL 133
KI DFGLA+ +
Sbjct: 149 RLVKIGDFGLAKAV 162
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 20/146 (13%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFEEFKNEVMLTAKL-QHLNLIRVGFCIETQEYM-LIYEY 58
G+ D I +K+ + K +F E+ + KL H N+I + E + Y+ L EY
Sbjct: 50 GLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 107
Query: 59 MPKRSLDYFL-------FDPIRML------ILDCKKRVHIIKGIIQGLLYLQEYFRLTII 105
P +L FL DP + L ++ +H + +G+ YL + I
Sbjct: 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFI 164
Query: 106 HRDLKVSNILLDEDLKPKISDFGLAR 131
HRDL NIL+ E+ KI+DFGL+R
Sbjct: 165 HRDLAARNILVGENYVAKIADFGLSR 190
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 8/119 (6%)
Query: 37 HLNLIRVGFCIETQEYM-LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLY 95
H N+I++ ET + L+++ M K L +L + + + + +K I++ +++ +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK---IMRALLEVICA 139
Query: 96 LQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRK-MILKQIQIELGYIPPEYV 153
L +L I+HRDLK NILLD+D+ K++DFG + L L+++ Y+ PE +
Sbjct: 140 LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 195
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 66/119 (55%), Gaps = 8/119 (6%)
Query: 37 HLNLIRVGFCIETQEYM-LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLY 95
H N+I++ ET + L+++ M K L +L + + + + +K I++ +++ +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK---IMRALLEVICA 126
Query: 96 LQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRK-MILKQIQIELGYIPPEYV 153
L +L I+HRDLK NILLD+D+ K++DFG + L L+++ Y+ PE +
Sbjct: 127 LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEII 182
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSL 64
G+++ +K+L + + F EV + L+H N+++ +G + + I EY+ +L
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
Query: 65 DYFLFDPIRMLI--LDCK----KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
R +I +D + +RV K I G+ YL + IIHRDL N L+ E
Sbjct: 95 --------RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRE 143
Query: 119 DLKPKISDFGLARIL 133
+ ++DFGLAR++
Sbjct: 144 NKNVVVADFGLARLM 158
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 26/147 (17%)
Query: 8 IIAVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L + ++ + +E + ++ H ++I++ G C + +LI EY SL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 66 YFLFDPIRM-------------LILDCKKRVHIIKG--------IIQGLLYLQEYFRLTI 104
FL + ++ LD + G I QG+ YL E +++
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MSL 171
Query: 105 IHRDLKVSNILLDEDLKPKISDFGLAR 131
+HRDL NIL+ E K KISDFGL+R
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 115
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 116 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 172
Query: 111 VSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
SN+ ++ED + KI DFGLAR + + Y PE + ++Y +
Sbjct: 173 PSNLAVNEDCELKILDFGLARHTDDEMXGXVATRW-YRAPEIMLNWMHYNQ 222
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 77/158 (48%), Gaps = 11/158 (6%)
Query: 6 GQIIAVKKLSKKSTQGFE---EFKNEVMLTAKLQHLNLIRVGFCIET-QEYMLIYEYMPK 61
G +AVK L+++ + + + + E+ +H ++I++ I T + ++ EY+
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
L ++ R LD K+ + + I+ G+ Y R ++HRDLK N+LLD +
Sbjct: 101 GELFDYICKNGR---LDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMN 154
Query: 122 PKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
KI+DFGL+ ++ L+ Y PE + +Y
Sbjct: 155 AKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLY 192
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 5 DGQIIAVKKLSKKSTQG-------FEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE 57
D ++A+K L ++G F+EF+ EV + + L H N++++ + + ++ E
Sbjct: 43 DKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL-YGLMHNPPRMVME 101
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL-- 115
++P L + L D + K R+ + I G+ Y+Q I+HRDL+ NI
Sbjct: 102 FVPCGDLYHRLLDKAHPIKWSVKLRLML--DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQ 158
Query: 116 -LDEDLK--PKISDFGLAR 131
LDE+ K++DF L++
Sbjct: 159 SLDENAPVCAKVADFSLSQ 177
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 115
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 116 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 172
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 173 PSNLAVNEDCELKILDFGLAR 193
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
GQ K+ K+ + +EF E + L H L+++ G C + + +I EYM L
Sbjct: 47 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+L + +R ++ + + K + + + YL+ +HRDL N L+++ K+
Sbjct: 107 LNYLRE-MRHR-FQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 161
Query: 125 SDFGLAR-ILRKMILKQI--QIELGYIPPEYVGRGVYYKKFS 163
SDFGL+R +L + + + + PPE + Y KFS
Sbjct: 162 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV----LMYSKFS 199
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 114
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 115 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 171
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 172 PSNLAVNEDCELKILDFGLAR 192
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
GQ K+ K+ + +EF E + L H L+++ G C + + +I EYM L
Sbjct: 38 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 97
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+L + ++ + + K + + + YL+ +HRDL N L+++ K+
Sbjct: 98 LNYLREMRHRF--QTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKV 152
Query: 125 SDFGLAR-ILRKMILKQI--QIELGYIPPEYVGRGVYYKKFS 163
SDFGL+R +L + + + + PPE + Y KFS
Sbjct: 153 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV----LMYSKFS 190
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 105
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 106 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 162
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 163 PSNLAVNEDCELKILDFGLAR 183
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 101
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 102 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 158
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 159 PSNLAVNEDCELKILDFGLAR 179
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 91
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 92 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 148
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 149 PSNLAVNEDCELKILDFGLAR 169
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 91
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 92 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 148
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 149 PSNLAVNEDCELKILDFGLAR 169
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Query: 37 HLNLIRVGFCIETQEYM-LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLY 95
H N+I++ ET + L+++ M K L +L + + + + +K I++ +++ +
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRK---IMRALLEVICA 139
Query: 96 LQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
L +L I+HRDLK NILLD+D+ K++DFG +
Sbjct: 140 LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
GQ K+ K+ + +EF E + L H L+++ G C + + +I EYM L
Sbjct: 32 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+L + ++ + + K + + + YL+ +HRDL N L+++ K+
Sbjct: 92 LNYLREMRHRF--QTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKV 146
Query: 125 SDFGLAR-ILRKMILKQI--QIELGYIPPEYVGRGVYYKKFS 163
SDFGL+R +L + + + + PPE + Y KFS
Sbjct: 147 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV----LMYSKFS 184
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
GQ K+ K+ + +EF E + L H L+++ G C + + +I EYM L
Sbjct: 31 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 90
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+L + ++ + + K + + + YL+ +HRDL N L+++ K+
Sbjct: 91 LNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 145
Query: 125 SDFGLAR-ILRKMILKQI--QIELGYIPPEYVGRGVYYKKFS 163
SDFGL+R +L + + + + PPE + Y KFS
Sbjct: 146 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV----LMYSKFS 183
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
GQ K+ K+ + +EF E + L H L+++ G C + + +I EYM L
Sbjct: 27 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 86
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+L + ++ + + K + + + YL+ +HRDL N L+++ K+
Sbjct: 87 LNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 141
Query: 125 SDFGLAR-ILRKMILKQI--QIELGYIPPEYVGRGVYYKKFS 163
SDFGL+R +L + + + + PPE + Y KFS
Sbjct: 142 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEV----LMYSKFS 179
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV------GFCIETQEYMLIYEYMPKR 62
+AVK + Q ++ + E+ T ++H NL++ G +E E LI + K
Sbjct: 41 VAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSNLEV-ELWLITAFHDKG 98
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQE--------YFRLTIIHRDLKVSNI 114
SL +L + I+ + H+ + + +GL YL E + +I HRD K N+
Sbjct: 99 SLTDYL----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNV 154
Query: 115 LLDEDLKPKISDFGLA 130
LL DL ++DFGLA
Sbjct: 155 LLKSDLTAVLADFGLA 170
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 5 DGQIIAVKKL--SKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKR 62
DG+ +K++ S+ S++ EE + EV + A ++H N+++ E + I
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV------ 101
Query: 63 SLDYF----LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+DY LF I + I+ +Q L L+ I+HRD+K NI L +
Sbjct: 102 -MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK 160
Query: 119 DLKPKISDFGLARILRKMI 137
D ++ DFG+AR+L +
Sbjct: 161 DGTVQLGDFGIARVLNSTV 179
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
GQ K+ K+ + +EF E + L H L+++ G C + + +I EYM L
Sbjct: 32 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+L + ++ + + K + + + YL+ +HRDL N L+++ K+
Sbjct: 92 LNYLREMRHRF--QTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 146
Query: 125 SDFGLARIL---RKMILKQIQIELGYIPPEYVGRGVYYKKFS 163
SDFGL+R + + + + + PPE + Y KFS
Sbjct: 147 SDFGLSRYVLDDEYTSSRGSKFPVRWSPPEV----LMYSKFS 184
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
GQ K+ K+ + +EF E + L H L+++ G C + + +I EYM L
Sbjct: 47 GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+L + +R ++ + + K + + + YL+ +HRDL N L+++ K+
Sbjct: 107 LNYLRE-MRHR-FQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKV 161
Query: 125 SDFGLAR-ILRKMILKQI--QIELGYIPPEYVGRGVYYKKFS 163
SDFGL+R +L + + + + PPE + Y KFS
Sbjct: 162 SDFGLSRYVLDDEETSSVGSKFPVRWSPPEV----LMYSKFS 199
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 91
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C K +I I++GL Y+ IIHRDLK
Sbjct: 92 LEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 148
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 149 PSNLAVNEDCELKILDFGLAR 169
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 5 DGQIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKR 62
D ++AVK + + +F E + + H N++R +G C + Q ++ E + +
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV--Q 195
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
D+ F L K + ++ G+ YL+ IHRDL N L+ E
Sbjct: 196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVL 252
Query: 123 KISDFGLARILRKMILKQI----QIELGYIPPEYVGRGVYYKK 161
KISDFG++R + Q+ + + PE + G Y +
Sbjct: 253 KISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSE 295
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLSK +S + E+ L ++H N+I L+ + P RS
Sbjct: 59 GLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 107
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 108 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 164
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 165 PSNLAVNEDCELKILDFGLAR 185
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++ +
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
D+ + + L K + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKDFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSH---RVLHRDLKPENLLINTEGAI 142
Query: 123 KISDFGLAR 131
K++DFGLAR
Sbjct: 143 KLADFGLAR 151
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 6 GQIIAVKKLSKKSTQGFE---EFKNEVMLTAKLQHLNLIRVGFCIET-QEYMLIYEYMPK 61
G +AVK L+++ + + + K E+ +H ++I++ I T ++ ++ EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
L ++ R+ ++ ++ + + I+ + Y R ++HRDLK N+LLD +
Sbjct: 96 GELFDYICKHGRVEEMEARR---LFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMN 149
Query: 122 PKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
KI+DFGL+ ++ L+ Y PE + +Y
Sbjct: 150 AKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 5 DGQIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKR 62
D ++AVK + + +F E + + H N++R +G C + Q ++ E + +
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV--Q 195
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
D+ F L K + ++ G+ YL+ IHRDL N L+ E
Sbjct: 196 GGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVL 252
Query: 123 KISDFGLARILRKMILKQI----QIELGYIPPEYVGRGVYYKK 161
KISDFG++R + Q+ + + PE + G Y +
Sbjct: 253 KISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 71/139 (51%), Gaps = 16/139 (11%)
Query: 3 LPDGQII----AVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ I +K + KS Q F+ + ++ L H +++R+ G C L+
Sbjct: 35 IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVT 93
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKRVHIIKG--IIQGLLYLQEYFRLTIIHRDLKVSNI 114
+Y+P SL D +R ++ + G I +G+ YL+E+ ++HR+L N+
Sbjct: 94 QYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNV 146
Query: 115 LLDEDLKPKISDFGLARIL 133
LL + +++DFG+A +L
Sbjct: 147 LLKSPSQVQVADFGVADLL 165
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 8 IIAVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L + ++ + +E + ++ H ++I++ G C + +LI EY SL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 66 YFLFDPIRM-------------LILDCKKRVHIIKG--------IIQGLLYLQEYFRLTI 104
FL + ++ LD + G I QG+ YL E + +
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKL 171
Query: 105 IHRDLKVSNILLDEDLKPKISDFGLAR 131
+HRDL NIL+ E K KISDFGL+R
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 8 IIAVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L + ++ + +E + ++ H ++I++ G C + +LI EY SL
Sbjct: 55 TVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLR 114
Query: 66 YFLFDPIRM-------------LILDCKKRVHIIKG--------IIQGLLYLQEYFRLTI 104
FL + ++ LD + G I QG+ YL E + +
Sbjct: 115 GFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKL 171
Query: 105 IHRDLKVSNILLDEDLKPKISDFGLAR 131
+HRDL NIL+ E K KISDFGL+R
Sbjct: 172 VHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV--GFCIETQEYMLIYEYMPKRSLD 65
+ A K + KS + E++ E+ + A H N++++ F E ++LI E+ ++D
Sbjct: 37 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVD 95
Query: 66 YFLFDPIRMLILDCKKRVHII-KGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ + R L + ++ ++ K + L YL + IIHRDLK NIL D K+
Sbjct: 96 AVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKL 149
Query: 125 SDFGLARILRKMILKQIQIELG---YIPPEYV 153
+DFG++ + +++ +G ++ PE V
Sbjct: 150 ADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVV 181
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 6 GQIIAVKKLSKKSTQGFE---EFKNEVMLTAKLQHLNLIRVGFCIET-QEYMLIYEYMPK 61
G +AVK L+++ + + + K E+ +H ++I++ I T ++ ++ EY+
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
L ++ R+ ++ ++ + + I+ + Y R ++HRDLK N+LLD +
Sbjct: 96 GELFDYICKHGRVEEMEARR---LFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMN 149
Query: 122 PKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
KI+DFGL+ ++ L+ Y PE + +Y
Sbjct: 150 AKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
SN+ ++ED + KI DFGLAR + + Y PE + ++Y +
Sbjct: 153 PSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW-YRAPEIMLNAMHYNQ 202
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 20/146 (13%)
Query: 1 GVLPDGQIIAVKKLSKKSTQGFEEFKNEVMLTAKL-QHLNLIRVGFCIETQEYM-LIYEY 58
G+ D I +K+ + K +F E+ + KL H N+I + E + Y+ L EY
Sbjct: 47 GLRMDAAIKRMKEYASKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEY 104
Query: 59 MPKRSLDYFL-------FDPIRML------ILDCKKRVHIIKGIIQGLLYLQEYFRLTII 105
P +L FL DP + L ++ +H + +G+ YL + I
Sbjct: 105 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFI 161
Query: 106 HRDLKVSNILLDEDLKPKISDFGLAR 131
HR+L NIL+ E+ KI+DFGL+R
Sbjct: 162 HRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
SN+ ++ED + KI DFGLAR + + Y PE + ++Y +
Sbjct: 153 PSNLAVNEDCELKILDFGLARHTDDEMTGXVATRW-YRAPEIMLNWMHYNQ 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD 90
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
D+ + + L K + ++QGL + + ++HRDLK N+L++ +
Sbjct: 91 LKDFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAI 145
Query: 123 KISDFGLAR 131
K++DFGLAR
Sbjct: 146 KLADFGLAR 154
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 74/171 (43%), Gaps = 27/171 (15%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKL-----QHLNLIRV-GFCIETQEYMLIYEYMPKR 62
+AVK L KST +E K +M K+ QH N++ + G C ++I EY
Sbjct: 79 VAVKML--KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 63 SLDYFL--------FDP---IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
L FL DP I L + +H + QG+ +L IHRD+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192
Query: 112 SNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
N+LL KI DFGLAR + ++ ++ + ++ PE + VY
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 243
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 16/139 (11%)
Query: 3 LPDGQII----AVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ I +K + KS Q F+ + ++ L H +++R+ G C + L+
Sbjct: 53 IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSS-LQLVT 111
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKRVHIIKG--IIQGLLYLQEYFRLTIIHRDLKVSNI 114
+Y+P SL D +R ++ + G I +G+ YL+E+ ++HR+L N+
Sbjct: 112 QYLPLGSL----LDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNV 164
Query: 115 LLDEDLKPKISDFGLARIL 133
LL + +++DFG+A +L
Sbjct: 165 LLKSPSQVQVADFGVADLL 183
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV--GFCIETQEYMLIYEYMPKRSLD 65
+ A K + KS + E++ E+ + A H N++++ F E ++LI E+ ++D
Sbjct: 64 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVD 122
Query: 66 YFLFDPIRMLILDCKKRVHII-KGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ + R L + ++ ++ K + L YL + IIHRDLK NIL D K+
Sbjct: 123 AVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKL 176
Query: 125 SDFGLA 130
+DFG++
Sbjct: 177 ADFGVS 182
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD 89
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
D+ + + L K + ++QGL + + ++HRDLK N+L++ +
Sbjct: 90 LKDFMDASALTGIPLPLIKSY--LFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAI 144
Query: 123 KISDFGLAR 131
K++DFGLAR
Sbjct: 145 KLADFGLAR 153
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
G+++AVKK+ + Q E NEV++ QH N++ + + E ++ E++ +
Sbjct: 48 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 107
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L D + ++ ++ + ++Q L L +IHRD+K +ILL D + K
Sbjct: 108 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVK 160
Query: 124 ISDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVY 158
+SDFG A++ +++ ++ + Y + PE + R Y
Sbjct: 161 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 197
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 59/126 (46%), Gaps = 10/126 (7%)
Query: 10 AVKKLSK-KSTQGFEEFKNEVMLTAKLQHLN---LIRVGFCIETQEYMLIYEYMPKRSLD 65
A+K LS+ Q E F E +L L H N LI + E ++L+ YM L
Sbjct: 53 AIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL-PYMCHGDLL 111
Query: 66 YFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKIS 125
F+ P R + K + + +G+ YL E +HRDL N +LDE K++
Sbjct: 112 QFIRSPQRNPTV--KDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVA 166
Query: 126 DFGLAR 131
DFGLAR
Sbjct: 167 DFGLAR 172
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 7 QIIAVKKLSKKSTQGFEEFK--NEVMLTAKLQHLNLIRVGFCIE-TQEYMLIYEYMPKRS 63
Q AVK ++K S + + EV L KL H N++++ +E + + ++ E
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 64 LDYFLFDPI-RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DED 119
L FD I + IIK + G+ Y+ ++ I+HRDLK NILL ++D
Sbjct: 108 L----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKD 160
Query: 120 LKPKISDFGLARILRKMILKQIQIELG-YIPPEYVGRGVYYKK 161
KI DFGL+ ++ + +I YI PE V RG Y +K
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEK 202
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 45 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 93
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 94 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 150
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 151 PSNLAVNEDCELKILDFGLAR 171
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV--GFCIETQEYMLIYEYMPKRSLD 65
+ A K + KS + E++ E+ + A H N++++ F E ++LI E+ ++D
Sbjct: 64 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVD 122
Query: 66 YFLFDPIRMLILDCKKRVHII-KGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ + R L + ++ ++ K + L YL + IIHRDLK NIL D K+
Sbjct: 123 AVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKL 176
Query: 125 SDFGLA 130
+DFG++
Sbjct: 177 ADFGVS 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 10/126 (7%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV--GFCIETQEYMLIYEYMPKRSLD 65
+ A K + KS + E++ E+ + A H N++++ F E ++LI E+ ++D
Sbjct: 64 LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVD 122
Query: 66 YFLFDPIRMLILDCKKRVHII-KGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ + R L + ++ ++ K + L YL + IIHRDLK NIL D K+
Sbjct: 123 AVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKL 176
Query: 125 SDFGLA 130
+DFG++
Sbjct: 177 ADFGVS 182
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
G+++AVKK+ + Q E NEV++ QH N++ + + E ++ E++ +
Sbjct: 44 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L D + ++ ++ + ++Q L L +IHRD+K +ILL D + K
Sbjct: 104 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVK 156
Query: 124 ISDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVY 158
+SDFG A++ +++ ++ + Y + PE + R Y
Sbjct: 157 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 193
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 102
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 103 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 159
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 160 PSNLAVNEDCELKILDFGLAR 180
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 114
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 115 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 171
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 172 PSNLAVNEDCELKILDFGLAR 192
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 102
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 103 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 159
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 160 PSNLAVNEDCELKILDFGLAR 180
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 100
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 101 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 157
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 158 PSNLAVNEDCELKILDFGLAR 178
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 106
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 107 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 163
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 164 PSNLAVNEDCELKILDFGLAR 184
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 94
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 95 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 151
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 152 PSNLAVNEDCELKILDFGLAR 172
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 100
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 101 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 157
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 158 PSNLAVNEDCELKILDFGLAR 178
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 97
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 98 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 154
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 155 PSNLAVNEDCELKILDFGLAR 175
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 115
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 116 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 172
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 173 PSNLAVNEDCELKILDFGLAR 193
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 118
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 119 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 175
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 176 PSNLAVNEDCELKILDFGLAR 196
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 102
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 103 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 159
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 160 PSNLAVNEDCELKILDFGLAR 180
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 107
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 108 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 164
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 165 PSNLAVNEDCELKILDFGLAR 185
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 107
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 108 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 164
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 165 PSNLAVNEDCELKILDFGLAR 185
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 97
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 98 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 154
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 155 PSNLAVNEDCELKILDFGLAR 175
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 118
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 119 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 175
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 176 PSNLAVNEDCELKILDFGLAR 196
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 102
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 103 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 159
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 160 PSNLAVNEDCELKILDFGLAR 180
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 97
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 98 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 154
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 155 PSNLAVNEDCELKILDFGLAR 175
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 43 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 91
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 92 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 148
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 149 PSNLAVNEDCELKILDFGLAR 169
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 100
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 101 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 157
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 158 PSNLAVNEDXELKILDFGLAR 178
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 7 QIIAVKKLSKKSTQGFEEFK--NEVMLTAKLQHLNLIRVGFCIE-TQEYMLIYEYMPKRS 63
Q AVK ++K S + + EV L KL H N++++ +E + + ++ E
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 64 LDYFLFDPI-RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DED 119
L FD I + IIK + G+ Y+ ++ I+HRDLK NILL ++D
Sbjct: 108 L----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKD 160
Query: 120 LKPKISDFGLARILRKMILKQIQIELG-YIPPEYVGRGVYYKK 161
KI DFGL+ ++ + +I YI PE V RG Y +K
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEK 202
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 92
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 93 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 149
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 150 PSNLAVNEDCELKILDFGLAR 170
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 92
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 93 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 149
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 150 PSNLAVNEDCELKILDFGLAR 170
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 7 QIIAVKKLSKKSTQGFEEFK--NEVMLTAKLQHLNLIRVGFCIE-TQEYMLIYEYMPKRS 63
Q AVK ++K S + + EV L KL H N++++ +E + + ++ E
Sbjct: 48 QEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGE 107
Query: 64 LDYFLFDPI-RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DED 119
L FD I + IIK + G+ Y+ ++ I+HRDLK NILL ++D
Sbjct: 108 L----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKD 160
Query: 120 LKPKISDFGLARILRKMILKQIQIELG-YIPPEYVGRGVYYKK 161
KI DFGL+ ++ + +I YI PE V RG Y +K
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEK 202
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 100
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 101 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 157
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 158 PSNLAVNEDXELKILDFGLAR 178
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 39 ILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 95
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + + K
Sbjct: 96 LGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELK 152
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 153 IADFGWSVHAPSSRRTTLCGTLDYLPPEMI 182
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
G+++AVKK+ + Q E NEV++ QH N++ + + E ++ E++ +
Sbjct: 53 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 112
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L D + ++ ++ + ++Q L L +IHRD+K +ILL D + K
Sbjct: 113 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVK 165
Query: 124 ISDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVY 158
+SDFG A++ +++ ++ + Y + PE + R Y
Sbjct: 166 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 202
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 27/171 (15%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKL-----QHLNLIRV-GFCIETQEYMLIYEYMPKR 62
+AVK L KST +E K +M K+ QH N++ + G C ++I EY
Sbjct: 79 VAVKML--KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 63 SLDYFLFDPIRMLILD-----------CKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
L FL R+L D + +H + QG+ +L IHRD+
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAA 192
Query: 112 SNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
N+LL KI DFGLAR + ++ ++ + ++ PE + VY
Sbjct: 193 RNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 243
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 101
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 102 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 158
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 159 PSNLAVNEDCELKILDFGLAR 179
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 39 ILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 95
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + + K
Sbjct: 96 LGTVYRELQKLSRFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSNGELK 152
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 153 IADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDL 193
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 101
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 102 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 158
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 159 PSNLAVNEDCELKILDFGLAR 179
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 106
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 107 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 163
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 164 PSNLAVNEDXELKILDFGLAR 184
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 19/143 (13%)
Query: 18 STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFLFDPI--RM 74
ST + EV + L H N++++ F + + Y L+ E L FD I RM
Sbjct: 76 STSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGEL----FDEIIHRM 131
Query: 75 LILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP---KISDFGLAR 131
+ V IIK ++ G+ YL ++ I+HRDLK N+LL+ K KI DFGL+
Sbjct: 132 KFNEVDAAV-IIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSA 187
Query: 132 ILRKMILKQIQIELG---YIPPE 151
+ K+++ LG YI PE
Sbjct: 188 VFENQ--KKMKERLGTAYYIAPE 208
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
G+++AVKK+ + Q E NEV++ QH N++ + + E ++ E++ +
Sbjct: 55 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L D + ++ ++ + ++Q L L +IHRD+K +ILL D + K
Sbjct: 115 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVK 167
Query: 124 ISDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVY 158
+SDFG A++ +++ ++ + Y + PE + R Y
Sbjct: 168 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 204
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 7 QIIAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIET-QEYMLIYEYMPKR 62
Q +A+K +S+ K + + E+ L+H ++I++ I T + +++ EY
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGE 94
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKG--IIQGLLYLQEY-FRLTIIHRDLKVSNILLDED 119
DY + KKR+ +G Q ++ EY R I+HRDLK N+LLD++
Sbjct: 95 LFDYIVE----------KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDN 144
Query: 120 LKPKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
L KI+DFGL+ I+ LK Y PE + +Y
Sbjct: 145 LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY 184
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 24/174 (13%)
Query: 5 DGQIIAVKKLSKKSTQGFEE--FKNEVMLTAKLQHLNLIRVGFCIETQEYMLIY---EYM 59
DG+I+ K+L S E+ +EV L +L+H N++R I + +Y EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRL-----TIIHRDL 109
L ++ K+R + +++ + Q L L+E R T++HRDL
Sbjct: 90 EGGDL-------ASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 110 KVSNILLDEDLKPKISDFGLARILR--KMILKQIQIELGYIPPEYVGRGVYYKK 161
K +N+ LD K+ DFGLARIL + K+ Y+ PE + R Y +K
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEK 196
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 10/161 (6%)
Query: 8 IIAVKKL--SKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L S+ +G E + + E+ + A L H N++R+ + + + LI EY P+
Sbjct: 50 IVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGE 109
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L L + D ++ I++ + L+Y +IHRD+K N+LL + K
Sbjct: 110 LYKEL---QKSCTFDEQRTATIMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELK 163
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + K + L Y+PPE + ++ +K L
Sbjct: 164 IADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDL 204
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 101
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 102 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 158
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 159 PSNLAVNEDSELKILDFGLAR 179
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 4 PDGQIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIR--VGFCIETQEYMLIYEYMP 60
P + +A+K+++ +K +E E+ ++ H N++ F ++ + ++++
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 61 KRSLDYFLF----DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL 116
LD + +LD I++ +++GL YL + + IHRD+K NILL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 117 DEDLKPKISDFGLARIL 133
ED +I+DFG++ L
Sbjct: 150 GEDGSVQIADFGVSAFL 166
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 92
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 93 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 149
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 150 IADFGWSCHAPSSRRTTLSGTLDYLPPEMI 179
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 74/132 (56%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD 90
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 91 LKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSH---RVLHRDLKPENLLINTE 142
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 143 GAIKLADFGLAR 154
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 91
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 92 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 148
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + ++ L Y+PPE + ++ +K L
Sbjct: 149 IADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDL 189
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 71/132 (53%), Gaps = 12/132 (9%)
Query: 6 GQIIAVKKLS----KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYM 59
QI+A+KK+ ++ G E+ L +L H N+I + + + L++++M
Sbjct: 35 NQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM 94
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
+ L+ + D L+L + +QGL YL +++ I+HRDLK +N+LLDE+
Sbjct: 95 -ETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDEN 148
Query: 120 LKPKISDFGLAR 131
K++DFGLA+
Sbjct: 149 GVLKLADFGLAK 160
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 97
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 98 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 154
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 155 PSNLAVNEDSELKILDFGLAR 175
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMD 88
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 89 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE 140
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 141 GAIKLADFGLAR 152
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 73/132 (55%), Gaps = 11/132 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP--- 60
G +A+K++ S +G E+ L +L+H N++R+ I T+ + L++E+M
Sbjct: 30 GVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDL 89
Query: 61 KRSLDY-FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D + + R L L+ K + ++QGL + E I+HRDLK N+L+++
Sbjct: 90 KKYMDSRTVGNTPRGLELNLVK--YFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKR 144
Query: 120 LKPKISDFGLAR 131
+ K+ DFGLAR
Sbjct: 145 GQLKLGDFGLAR 156
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYI 148
II GL ++ F +++RDLK +NILLDE +ISD GLA K GY+
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 357
Query: 149 PPEYVGRGVYY 159
PE + +GV Y
Sbjct: 358 APEVLQKGVAY 368
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYI 148
II GL ++ F +++RDLK +NILLDE +ISD GLA K GY+
Sbjct: 300 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 356
Query: 149 PPEYVGRGVYY 159
PE + +GV Y
Sbjct: 357 APEVLQKGVAY 367
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 79/157 (50%), Gaps = 10/157 (6%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
G+++AVKK+ + Q E NEV++ QH N++ + + E ++ E++ +
Sbjct: 98 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L D + ++ ++ + ++Q L L +IHRD+K +ILL D + K
Sbjct: 158 LT----DIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVK 210
Query: 124 ISDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVY 158
+SDFG A++ +++ ++ + Y + PE + R Y
Sbjct: 211 LSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPY 247
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYI 148
II GL ++ F +++RDLK +NILLDE +ISD GLA K GY+
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 357
Query: 149 PPEYVGRGVYY 159
PE + +GV Y
Sbjct: 358 APEVLQKGVAY 368
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYI 148
II GL ++ F +++RDLK +NILLDE +ISD GLA K GY+
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYM 357
Query: 149 PPEYVGRGVYY 159
PE + +GV Y
Sbjct: 358 APEVLQKGVAY 368
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P+
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE 99
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+ L ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 100 VYKEL---QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 153
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 154 IADFGWSVHAPSSRRXXLXGTLDYLPPEMI 183
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 4 PDGQIIAVKKLS-KKSTQGFEEFKNEVMLTAKLQHLNLIR--VGFCIETQEYMLIYEYMP 60
P + +A+K+++ +K +E E+ ++ H N++ F ++ + ++++
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 61 KRSLDYFLF----DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL 116
LD + +LD I++ +++GL YL + + IHRD+K NILL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 117 DEDLKPKISDFGLARIL 133
ED +I+DFG++ L
Sbjct: 155 GEDGSVQIADFGVSAFL 171
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 65/117 (55%), Gaps = 8/117 (6%)
Query: 37 HLNLIRVGFCIETQEYM-LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLY 95
H ++I + E+ +M L+++ M K L +L + + L K+ I++ +++ + +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV---ALSEKETRSIMRSLLEAVSF 215
Query: 96 LQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRK-MILKQIQIELGYIPPE 151
L I+HRDLK NILLD++++ ++SDFG + L L+++ GY+ PE
Sbjct: 216 LHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ ++ LI EY P
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAP--- 91
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 92 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---KVIHRDIKPENLLLGSAGELK 148
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 149 IADFGWSVHAPSSRRAALCGTLDYLPPEMI 178
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLXQVIQME-LDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYF 67
IA+K++ ++ ++ + E+ L L+H N+++ +G E + E +P SL
Sbjct: 36 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 95
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE-DLKPKISD 126
L L + + K I++GL YL + I+HRD+K N+L++ KISD
Sbjct: 96 LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISD 152
Query: 127 FGLARILRKM--ILKQIQIELGYIPPEYVGRG 156
FG ++ L + + L Y+ PE + +G
Sbjct: 153 FGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 184
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 7/109 (6%)
Query: 25 FKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRV 83
FK EVM + +H N++ +G C+ +I R+L + D ++LD K
Sbjct: 76 FKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTR 133
Query: 84 HIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARI 132
I + I++G+ YL I+H+DLK N+ D K I+DFGL I
Sbjct: 134 QIAQEIVKGMGYLHAK---GILHKDLKSKNVFYDNG-KVVITDFGLFSI 178
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 26 KNEVMLTAKLQHLNLIRVGFCIET-QEYMLIYEYMPKRSLDYFLFDPI-RMLILDCKKRV 83
+ E+ + +L H N+I++ ET E L+ E + L FD I +
Sbjct: 96 RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAA 151
Query: 84 HIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE---DLKPKISDFGLARILRKMIL-K 139
+K I++ + YL E I+HRDLK N+L D KI+DFGL++I+ +L K
Sbjct: 152 DAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMK 208
Query: 140 QIQIELGYIPPEYVGRGVYY 159
+ GY PE + RG Y
Sbjct: 209 TVCGTPGYCAPEIL-RGCAY 227
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 5 DGQIIAVKKLSKKSTQGFEE--FKNEVMLTAKLQHLNLIRVGFCIETQEYMLIY---EYM 59
DG+I+ K+L S E+ +EV L +L+H N++R I + +Y EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRL-----TIIHRDL 109
L ++ K+R + +++ + Q L L+E R T++HRDL
Sbjct: 90 EGGDL-------ASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 110 KVSNILLDEDLKPKISDFGLARILR--KMILKQIQIELGYIPPEYVGRGVYYKK 161
K +N+ LD K+ DFGLARIL K Y+ PE + R Y +K
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEK 196
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 29/170 (17%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G+ +A+KKLS+ +S + E++L +QH N+I L+ + P S
Sbjct: 49 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIG-----------LLDVFTPASS 97
Query: 64 L----DYFLFDP--------IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
L D++L P I L +K +++ +++GL Y+ ++HRDLK
Sbjct: 98 LRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKP 154
Query: 112 SNILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
N+ ++ED + KI DFGLAR + + + Y PE + ++Y +
Sbjct: 155 GNLAVNEDCELKILDFGLARHADAEMTGYV-VTRWYRAPEVILSWMHYNQ 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 89
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 90 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE 141
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 142 GAIKLADFGLAR 153
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 5 DGQIIAVKKLSKKSTQGFEE--FKNEVMLTAKLQHLNLIRVGFCIETQEYMLIY---EYM 59
DG+I+ K+L S E+ +EV L +L+H N++R I + +Y EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRL-----TIIHRDL 109
L ++ K+R + +++ + Q L L+E R T++HRDL
Sbjct: 90 EGGDL-------ASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDL 142
Query: 110 KVSNILLDEDLKPKISDFGLARILR--KMILKQIQIELGYIPPEYVGRGVYYKK 161
K +N+ LD K+ DFGLARIL K Y+ PE + R Y +K
Sbjct: 143 KPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEK 196
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 88
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 89 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPENLLINTE 140
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 141 GAIKLADFGLAR 152
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 88
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 89 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 140
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 141 GAIKLADFGLAR 152
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 139
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 140 GAIKLADFGLAR 151
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 32 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 91
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 92 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 143
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 144 GAIKLADFGLAR 155
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 35 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 94
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 95 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 146
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 147 GAIKLADFGLAR 158
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 88
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 89 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 140
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 141 GAIKLADFGLAR 152
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 90
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 91 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 142
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 143 GAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 89
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 90 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 141
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 142 GAIKLADFGLAR 153
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI D+GLAR
Sbjct: 153 PSNLAVNEDCELKILDYGLAR 173
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYF 67
IA+K++ ++ ++ + E+ L L+H N+++ +G E + E +P SL
Sbjct: 50 IAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL 109
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE-DLKPKISD 126
L L + + K I++GL YL + I+HRD+K N+L++ KISD
Sbjct: 110 LRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISD 166
Query: 127 FGLARILRKM--ILKQIQIELGYIPPEYVGRG 156
FG ++ L + + L Y+ PE + +G
Sbjct: 167 FGTSKRLAGINPCTETFTGTLQYMAPEIIDKG 198
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 30 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 89
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 90 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 141
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 142 GAIKLADFGLAR 153
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 87 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 138
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 139 GAIKLADFGLAR 150
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 139
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 140 GAIKLADFGLAR 151
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 32 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 91
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 92 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 143
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 144 GAIKLADFGLAR 155
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 87 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 138
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 139 GAIKLADFGLAR 150
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 139
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 140 GAIKLADFGLAR 151
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 87 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 138
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 139 GAIKLADFGLAR 150
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++ +
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQ 89
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L F+ D + + + ++QGL + + ++HRDLK N+L++ +
Sbjct: 90 DLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAI 145
Query: 123 KISDFGLAR 131
K++DFGLAR
Sbjct: 146 KLADFGLAR 154
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 90
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 91 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 142
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 143 GAIKLADFGLAR 154
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 16/145 (11%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
D + A+KK+ + + + +EVML A L H ++R +E + ++ + K+S
Sbjct: 30 DSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88
Query: 64 L---------DYFLFDPIRMLILDCKKRVH--IIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+ L+D I L+ ++ + + + I++ L Y+ IIHRDLK
Sbjct: 89 TLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPM 145
Query: 113 NILLDEDLKPKISDFGLARILRKMI 137
NI +DE KI DFGLA+ + + +
Sbjct: 146 NIFIDESRNVKIGDFGLAKNVHRSL 170
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 87 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 138
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 139 GAIKLADFGLAR 150
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 35 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 94
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 95 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 146
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 147 GAIKLADFGLAR 158
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSL 64
GQ +A+++++ + E NE+++ + ++ N++ + + E ++ EY+ SL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
D + +D + + + +Q L +L +IHRD+K NILL D K+
Sbjct: 105 ----TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKL 157
Query: 125 SDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVYYKKFSL 164
+DFG A+I + + + Y + PE V R Y K +
Sbjct: 158 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 139
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 140 GAIKLADFGLAR 151
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 139
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 140 GAIKLADFGLAR 151
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 29 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 88
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 89 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 140
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 141 GAIKLADFGLAR 152
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 94
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 95 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 151
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 152 IADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDL 192
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 139
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 140 GAIKLADFGLAR 151
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 75/129 (58%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+I+A+K++ +G E+ L +L H N++ + I ++ + L++E+M ++
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EK 103
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L L D + + D + ++++ + +++G+ + ++ I+HRDLK N+L++ D
Sbjct: 104 DLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RILHRDLKPQNLLINSDGAL 158
Query: 123 KISDFGLAR 131
K++DFGLAR
Sbjct: 159 KLADFGLAR 167
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKL-----QHLNLIRV-GFCIETQEYMLIYEYMPKR 62
+AVK L KST +E K +M K+ QH N++ + G C ++I EY
Sbjct: 71 VAVKML--KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 63 SLDYFL-------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L FL D L+ + +H + QG+ +L IHRD+ N+L
Sbjct: 128 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 184
Query: 116 LDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
L KI DFGLAR + ++ ++ + ++ PE + VY
Sbjct: 185 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 231
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI-ETQEYMLIYEYMPKRSL 64
+II KKLS + Q E E + L+H N++R+ I E + LI++ + L
Sbjct: 52 AKIINTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 108
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
D + H I+ I++ +L+ + + ++HRDLK N+LL LK
Sbjct: 109 ---FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAA 162
Query: 123 -KISDFGLA 130
K++DFGLA
Sbjct: 163 VKLADFGLA 171
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 39 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 95
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 96 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 152
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 153 IADFGWSVHAPSSRRTTLCGTLDYLPPEMI 182
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 96
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 97 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 153
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 154 IADFGWSVHAPSSRRTTLCGTLDYLPPEXI 183
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR-KMILKQIQIELGY 147
+++GL +L + ++HRDLK NIL+ + K++DFGLARI +M L + + L Y
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 148 IPPEYVGRGVYYKKFSL 164
PE + + Y L
Sbjct: 186 RAPEVLLQSSYATPVDL 202
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 94
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 95 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 151
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 152 IADFGWSVHAPSSRRAALCGTLDYLPPEMI 181
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P+
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE 99
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+ L ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 100 VYKEL---QKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 153
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 154 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 74/132 (56%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTE 139
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 140 GAIKLADFGLAR 151
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR-KMILKQIQIELGY 147
+++GL +L + ++HRDLK NIL+ + K++DFGLARI +M L + + L Y
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 148 IPPEYVGRGVYYKKFSL 164
PE + + Y L
Sbjct: 186 RAPEVLLQSSYATPVDL 202
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR-KMILKQIQIELGY 147
+++GL +L + ++HRDLK NIL+ + K++DFGLARI +M L + + L Y
Sbjct: 129 LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWY 185
Query: 148 IPPEYVGRGVYYKKFSL 164
PE + + Y L
Sbjct: 186 RAPEVLLQSSYATPVDL 202
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 91
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 92 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 148
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 149 IADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 75/129 (58%), Gaps = 9/129 (6%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+I+A+K++ +G E+ L +L H N++ + I ++ + L++E+M ++
Sbjct: 45 GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM-EK 103
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L L D + + D + ++++ + +++G+ + ++ I+HRDLK N+L++ D
Sbjct: 104 DLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RILHRDLKPQNLLINSDGAL 158
Query: 123 KISDFGLAR 131
K++DFGLAR
Sbjct: 159 KLADFGLAR 167
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 91
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 92 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 148
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 149 IADFGWSVHAPSSRRAALCGTLDYLPPEMI 178
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 96
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 97 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 153
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 154 IADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 194
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 91
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 92 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 148
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 149 IADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 189
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 16/145 (11%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
D + A+KK+ + + + +EVML A L H ++R +E + ++ + K+S
Sbjct: 30 DSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88
Query: 64 -----LDY----FLFDPIRMLILDCKKRVH--IIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
++Y L+D I L+ ++ + + + I++ L Y+ IIHRDLK
Sbjct: 89 TLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPM 145
Query: 113 NILLDEDLKPKISDFGLARILRKMI 137
NI +DE KI DFGLA+ + + +
Sbjct: 146 NIFIDESRNVKIGDFGLAKNVHRSL 170
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 32 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 88
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 89 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 145
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 146 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 186
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKL-----QHLNLIRV-GFCIETQEYMLIYEYMPKR 62
+AVK L KST +E K +M K+ QH N++ + G C ++I EY
Sbjct: 79 VAVKML--KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 63 SLDYFL-------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L FL D L+ + +H + QG+ +L IHRD+ N+L
Sbjct: 136 DLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 192
Query: 116 LDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
L KI DFGLAR + ++ ++ + ++ PE + VY
Sbjct: 193 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 239
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 91
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 92 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 148
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 149 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 189
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
G+++AVKK+ + Q E NEV++ QH N++ + + E ++ E++ +L
Sbjct: 176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
D + ++ ++ + ++Q L L +IHRD+K +ILL D + K+
Sbjct: 236 ----TDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKL 288
Query: 125 SDFGLARILRKMILKQIQIELG---YIPPEYVGRGVY 158
SDFG + K + ++ + +G ++ PE + R Y
Sbjct: 289 SDFGFCAQVSKEVPRRKXL-VGTPYWMAPELISRLPY 324
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 92
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 93 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 149
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 150 IADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDL 190
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLXQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 74/132 (56%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 31 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQD 90
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 91 LKKFMDASALTGIPLPLI----KSYLFQ-LLQGLAFCHSH---RVLHRDLKPQNLLINTE 142
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 143 GAIKLADFGLAR 154
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 91
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 92 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 148
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 149 IADFGWSVHAPSSRRTXLCGTLDYLPPEMI 178
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 6 GQIIAVKKLSKKSTQGFEE--FKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKR 62
G+I+A+KK + + E+ L +L+H NL+ + C + + + L++E+
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF---- 105
Query: 63 SLDYFLFDPIRMLI--LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
+D+ + D + + LD + + II G+ + + IIHRD+K NIL+ +
Sbjct: 106 -VDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSG 161
Query: 121 KPKISDFGLARIL 133
K+ DFG AR L
Sbjct: 162 VVKLCDFGFARTL 174
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 34 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 90
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 91 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 147
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 148 IADFGWSVHAPSSRRTTLCGTLDYLPPEMI 177
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 94
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 95 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 151
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 152 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 96
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 97 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 153
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 154 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 194
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 104 MDANLXQVIQME-LDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLK 159
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 160 ILDFGLAR 167
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLXQVIQME-LDHERMSYLLYQMLXGIKHLHS---AGIIHRDLKPSNIVVKSDXTLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.1 bits (105), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + K
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKN 470
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 471 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 520
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 92
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 93 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 149
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 150 IADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDL 190
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 94
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 95 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 151
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 152 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDXTLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 71/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 28 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLSFCHSH---RVLHRDLKPQNLLINTE 139
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 140 GAIKLADFGLAR 151
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 28/140 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G+ +A+KKLS+ +S + E++L +QH N+I L+ + P S
Sbjct: 67 GEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIG-----------LLDVFTPASS 115
Query: 64 L----DYFLFDP--------IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
L D++L P I + +K +++ +++GL Y+ ++HRDLK
Sbjct: 116 LRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKP 172
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+ ++ED + KI DFGLAR
Sbjct: 173 GNLAVNEDCELKILDFGLAR 192
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 91
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 92 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 148
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV 153
I+DFG + + L Y+PPE +
Sbjct: 149 IADFGWSVHAPSSRRXXLCGTLDYLPPEMI 178
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.1 bits (105), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + K
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRH---VKDKN 471
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 472 IIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 521
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSL 64
GQ +A+++++ + E NE+++ + ++ N++ + + E ++ EY+ SL
Sbjct: 46 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
D + +D + + + +Q L +L +IHRD+K NILL D K+
Sbjct: 106 ----TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKL 158
Query: 125 SDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVYYKKFSL 164
+DFG A+I + + + Y + PE V R Y K +
Sbjct: 159 TDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 200
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL-----RKMILKQ 140
++ I+ G YL R +IHRDLK+ N+ L+EDL+ KI DFGLA + RK +L
Sbjct: 121 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 177
Query: 141 IQIELGYIPPEYVGR 155
YI PE + +
Sbjct: 178 TP---NYIAPEVLSK 189
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
G+ +AVKK+ + Q E NEV++ H N++ + + E ++ E++ +L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
D + ++ ++ + +++ L YL +IHRD+K +ILL D + K+
Sbjct: 130 T----DIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKL 182
Query: 125 SDFGLARILRKMILKQIQIELG---YIPPEYVGRGVY 158
SDFG + K + K+ + +G ++ PE + R Y
Sbjct: 183 SDFGFCAQVSKEVPKRKXL-VGTPYWMAPEVISRLPY 218
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSL 64
GQ +A+++++ + E NE+++ + ++ N++ + + E ++ EY+ SL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
D + +D + + + +Q L +L +IHRD+K NILL D K+
Sbjct: 105 ----TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKL 157
Query: 125 SDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVYYKKFSL 164
+DFG A+I + + + Y + PE V R Y K +
Sbjct: 158 TDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDI 199
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 94
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 95 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 151
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 152 IADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 192
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 28 EVMLTAKLQ---HLNLIR-VGFCIETQ-----EYMLIYEYMPKRSLDYFLFDPIRMLILD 78
EV L +L+ H N++R + C ++ + L++E++ + Y P L +
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 79 CKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR-KMI 137
K +++ ++GL +L I+HRDLK NIL+ K++DFGLARI +M
Sbjct: 113 TIK--DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 138 LKQIQIELGYIPPEYVGRGVY 158
L + + L Y PE + + Y
Sbjct: 168 LAPVVVTLWYRAPEVLLQSTY 188
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G IAVKKLS+ +S + E+ L ++H N+I L+ + P S
Sbjct: 76 GLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPATS 124
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 125 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 181
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 182 PSNLAVNEDCELKILDFGLAR 202
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 28 EVMLTAKLQ---HLNLIR-VGFCIETQ-----EYMLIYEYMPKRSLDYFLFDPIRMLILD 78
EV L +L+ H N++R + C ++ + L++E++ + Y P L +
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 79 CKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR-KMI 137
K +++ ++GL +L I+HRDLK NIL+ K++DFGLARI +M
Sbjct: 121 TIK--DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 175
Query: 138 LKQIQIELGYIPPEYVGRGVY 158
L + + L Y PE + + Y
Sbjct: 176 LTPVVVTLWYRAPEVLLQSTY 196
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 37 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 93
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 94 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 150
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 151 IADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDL 191
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 28 EVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIK 87
E+ + ++++H N+I+V E Q + + LD F F R LD +I +
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFID-RHPRLDEPLASYIFR 137
Query: 88 GIIQGLLYLQEYFRL-TIIHRDLKVSNILLDEDLKPKISDFGLARILRK 135
++ + YL RL IIHRD+K NI++ ED K+ DFG A L +
Sbjct: 138 QLVSAVGYL----RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 66 YFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+L F+P L K V + +G+ YL IHRDL
Sbjct: 123 EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 179
Query: 113 NILLDEDLKPKISDFGLAR 131
N+L+ ED KI+DFGLAR
Sbjct: 180 NVLVTEDNVMKIADFGLAR 198
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKR 82
+ + EV + + L+H N++R+ G+ + LI EY P L + ++ D ++
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRT 136
Query: 83 VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQ 142
I + L Y +IHRD+K N+LL + KI+DFG + +
Sbjct: 137 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC 193
Query: 143 IELGYIPPEYVGRGVYYKKFSL 164
L Y+PPE + ++ +K L
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDL 215
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 11/84 (13%)
Query: 54 LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQE-------YFRLTIIH 106
LI + K SL FL + ++ + HI + + +GL YL E + I H
Sbjct: 99 LITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISH 154
Query: 107 RDLKVSNILLDEDLKPKISDFGLA 130
RD+K N+LL +L I+DFGLA
Sbjct: 155 RDIKSKNVLLKNNLTACIADFGLA 178
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL-----RKMILKQ 140
++ I+ G YL R +IHRDLK+ N+ L+EDL+ KI DFGLA + RK +L
Sbjct: 145 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 201
Query: 141 IQIELGYIPPEYVGR 155
YI PE + +
Sbjct: 202 TP---NYIAPEVLSK 213
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 28 EVMLTAKLQ---HLNLIR-VGFCIETQ-----EYMLIYEYMPKRSLDYFLFDPIRMLILD 78
EV L +L+ H N++R + C ++ + L++E++ + Y P L +
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 79 CKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR-KMI 137
K +++ ++GL +L I+HRDLK NIL+ K++DFGLARI +M
Sbjct: 113 TIK--DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 138 LKQIQIELGYIPPEYVGRGVY 158
L + + L Y PE + + Y
Sbjct: 168 LDPVVVTLWYRAPEVLLQSTY 188
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 24/141 (17%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV---------------GFCIETQEYM 53
+A+KK+ Q + E+ + +L H N+++V G E
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 54 LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSN 113
++ EYM + P+ L+ R+ + + +++GL Y+ ++HRDLK +N
Sbjct: 99 IVQEYMETDLANVLEQGPL----LEEHARLFMYQ-LLRGLKYIHS---ANVLHRDLKPAN 150
Query: 114 ILLD-EDLKPKISDFGLARIL 133
+ ++ EDL KI DFGLARI+
Sbjct: 151 LFINTEDLVLKIGDFGLARIM 171
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 52 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 108
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 109 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 165
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + L Y+PPE + ++ +K L
Sbjct: 166 IADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 206
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
++ I+ G YL R +IHRDLK+ N+ L+EDL+ KI DFGLA
Sbjct: 123 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
++ I+ G YL R +IHRDLK+ N+ L+EDL+ KI DFGLA
Sbjct: 123 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 47 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 106
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 107 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 161
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 162 FTVKVADFGLAR 173
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
++ I+ G YL R +IHRDLK+ N+ L+EDL+ KI DFGLA
Sbjct: 127 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+++A+KK+ T+G E+ L +L H N++++ I T+ + L++E++ +
Sbjct: 27 GEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQ 85
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L F+ D + + + ++QGL + + ++HRDLK N+L++ +
Sbjct: 86 DLKTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAI 141
Query: 123 KISDFGLAR 131
K++DFGLAR
Sbjct: 142 KLADFGLAR 150
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 11/75 (14%)
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL-----RKMILKQ 140
++ I+ G YL R +IHRDLK+ N+ L+EDL+ KI DFGLA + RK +L
Sbjct: 147 LRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCG 203
Query: 141 IQIELGYIPPEYVGR 155
YI PE + +
Sbjct: 204 TP---NYIAPEVLSK 215
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 24 EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKR 82
+ + EV + + L+H N++R+ G+ + LI EY P L + ++ D ++
Sbjct: 80 QLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRT 136
Query: 83 VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQ 142
I + L Y +IHRD+K N+LL + KI+DFG + +
Sbjct: 137 ATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC 193
Query: 143 IELGYIPPEYVGRGVYYKKFSL 164
L Y+PPE + ++ +K L
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDL 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 6 GQIIAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMP 60
G +AVKKLS+ T ++ V+L + H N+I + Q+ + ++ Y+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKC-VNHKNIISLLNVFTPQKTLEEFQDVYLV 107
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
+D L I M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D
Sbjct: 108 MELMDANLCQVIHME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDC 163
Query: 121 KPKISDFGLAR 131
KI DFGLAR
Sbjct: 164 TLKILDFGLAR 174
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 74 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 133
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 134 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 188
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 189 FTVKVADFGLAR 200
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 52 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 101
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 116 LDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+ D KI DFGLAR + + ++ Y V G+ YK+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 52 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 101
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 116 LDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+ D KI DFGLAR + + ++ Y V G+ YK+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 73 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 132
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 133 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 187
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 188 FTVKVADFGLAR 199
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 50 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 110 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 164
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 165 FTVKVADFGLAR 176
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 52 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 111
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 112 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 166
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 167 FTVKVADFGLAR 178
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 114 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 168
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 169 FTVKVADFGLAR 180
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 113 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 167
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 168 FTVKVADFGLAR 179
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 6 GQIIAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMP 60
G +AVKKLS+ T ++ V+L + H N+I + Q+ + ++ Y+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKC-VNHKNIISLLNVFTPQKTLEEFQDVYLV 105
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
+D L I M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D
Sbjct: 106 MELMDANLCQVIHME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDC 161
Query: 121 KPKISDFGLAR 131
KI DFGLAR
Sbjct: 162 TLKILDFGLAR 172
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYF 67
+AVK K T E+F +E ++ L H +++++ IE + +I E P L ++
Sbjct: 43 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY 102
Query: 68 LF---DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
L + +++L L V I + + YL+ + +HRD+ V NIL+ K+
Sbjct: 103 LERNKNSLKVLTL-----VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKL 154
Query: 125 SDFGLAR 131
DFGL+R
Sbjct: 155 GDFGLSR 161
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 115 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 169
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 170 FTVKVADFGLAR 181
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 115 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 169
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 170 FTVKVADFGLAR 181
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 112 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 167
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 168 ILDFGLAR 175
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 111
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 112 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 167
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 168 ILDFGLAR 175
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYF 67
+AVK K T E+F +E ++ L H +++++ IE + +I E P L ++
Sbjct: 55 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY 114
Query: 68 LF---DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
L + +++L L V I + + YL+ + +HRD+ V NIL+ K+
Sbjct: 115 LERNKNSLKVLTL-----VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKL 166
Query: 125 SDFGLAR 131
DFGL+R
Sbjct: 167 GDFGLSR 173
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 54 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 113
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ YL +HRDL N +LDE
Sbjct: 114 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEK 168
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 169 FTVKVADFGLAR 180
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DF LAR
Sbjct: 153 PSNLAVNEDCELKILDFYLAR 173
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYF 67
+AVK K T E+F +E ++ L H +++++ IE + +I E P L ++
Sbjct: 39 VAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHY 98
Query: 68 LF---DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
L + +++L L V I + + YL+ + +HRD+ V NIL+ K+
Sbjct: 99 LERNKNSLKVLTL-----VLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKL 150
Query: 125 SDFGLAR 131
DFGL+R
Sbjct: 151 GDFGLSR 157
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 103
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 104 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 159
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 160 ILDFGLAR 167
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 105 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 160
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 161 ILDFGLAR 168
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 104
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 105 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 160
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 161 ILDFGLAR 168
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 109
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 110 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 165
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 166 ILDFGLAR 173
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSL 64
GQ +A+++++ + E NE+++ + ++ N++ + + E ++ EY+ SL
Sbjct: 45 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
D + +D + + + +Q L +L +IHRD+K NILL D K+
Sbjct: 105 ----TDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKL 157
Query: 125 SDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVYYKKFSL 164
+DFG A+I + + + Y + PE V R Y K +
Sbjct: 158 TDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDI 199
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 149 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 204
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 205 ILDFGLAR 212
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF-------------LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L + ++ L +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDXELKILDFGLAR 173
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF-------------LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L + ++ L +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGLAR
Sbjct: 153 PSNLAVNEDCELKILDFGLAR 173
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 10/129 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMEL 148
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 149 MDANLCQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 204
Query: 124 ISDFGLARI 132
I DFGLAR
Sbjct: 205 ILDFGLART 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 4 PDGQIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRVGFCIET-------QEYMLI 55
P G+I+A+KK+ F E+ + +H N+I + F I+ E +I
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI-FNIQRPDSFENFNEVYII 92
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E M D +ML D HI I Q L ++ +IHRDLK SN+L
Sbjct: 93 QELM---QTDLHRVISTQMLSDD-----HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 116 LDEDLKPKISDFGLARIL 133
++ + K+ DFGLARI+
Sbjct: 145 INSNCDLKVCDFGLARII 162
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 4 PDGQIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRVGFCIET-------QEYMLI 55
P G+I+A+KK+ F E+ + +H N+I + F I+ E +I
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI-FNIQRPDSFENFNEVYII 92
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E M D +ML D HI I Q L ++ +IHRDLK SN+L
Sbjct: 93 QELM---QTDLHRVISTQMLSDD-----HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 116 LDEDLKPKISDFGLARIL 133
++ + K+ DFGLARI+
Sbjct: 145 INSNCDLKVCDFGLARII 162
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 4 PDGQIIAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRVGFCIET-------QEYMLI 55
P G+I+A+KK+ F E+ + +H N+I + F I+ E +I
Sbjct: 34 PTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITI-FNIQRPDSFENFNEVYII 92
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E M D +ML D HI I Q L ++ +IHRDLK SN+L
Sbjct: 93 QELM---QTDLHRVISTQMLSDD-----HIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLL 144
Query: 116 LDEDLKPKISDFGLARIL 133
++ + K+ DFGLARI+
Sbjct: 145 INSNCDLKVCDFGLARII 162
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 28/141 (19%)
Query: 9 IAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEY-----MLIYEYMP 60
+AVK KL S + EEF +E H N+IR+ G CIE M+I +M
Sbjct: 65 VAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMK 124
Query: 61 KRSL-DYFLFD---------PIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLK 110
L Y L+ P++ L+ + I G+ YL +HRDL
Sbjct: 125 YGDLHTYLLYSRLETGPKHIPLQTLL-------KFMVDIALGMEYLSNR---NFLHRDLA 174
Query: 111 VSNILLDEDLKPKISDFGLAR 131
N +L +D+ ++DFGL++
Sbjct: 175 ARNCMLRDDMTVCVADFGLSK 195
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
GQI+A+K++ +S +E E+ + + ++++ G + + ++ EY S+
Sbjct: 54 GQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
+ +R L + I++ ++GL YL +F + IHRD+K NILL+ + K+
Sbjct: 112 SDIIR--LRNKTLTEDEIATILQSTLKGLEYL--HF-MRKIHRDIKAGNILLNTEGHAKL 166
Query: 125 SDFGLARILRKMILKQ 140
+DFG+A L + K+
Sbjct: 167 ADFGVAGQLTDXMAKR 182
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI FGLAR
Sbjct: 153 PSNLAVNEDCELKILGFGLAR 173
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 52 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 101
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 116 LDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+ D KI DFGLAR + ++ Y V G+ YK+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKE 204
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 33/170 (19%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLD 65
+II KKLS + Q E E + L+H N++R +++ + +
Sbjct: 34 AKIINTKKLSARDHQKLE---REARICRLLKHSNIVR------------LHDSISEEGFH 78
Query: 66 YFLFDPIR--MLILDCKKR--------VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
Y +FD + L D R H I+ I++ +L+ + + ++HRDLK N+L
Sbjct: 79 YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLL 135
Query: 116 LDEDLKP---KISDFGLARILR--KMILKQIQIELGYIPPEYVGRGVYYK 160
L K K++DFGLA ++ + GY+ PE + + Y K
Sbjct: 136 LASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGK 185
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 54 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 103
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 104 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 160
Query: 116 LDEDLKPKISDFGLAR 131
+ D KI DFGLAR
Sbjct: 161 VKSDCTLKILDFGLAR 176
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 6 GQIIAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPK 61
GQ AVK +SK K E EV L +L H N++++ E + Y L+ E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 110
Query: 62 RSLDYFLFDPI----RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD 117
L FD I R +D + II+ ++ G+ Y+ + I+HRDLK N+LL+
Sbjct: 111 GEL----FDEIISRKRFSEVDAAR---IIRQVLSGITYMH---KNKIVHRDLKPENLLLE 160
Query: 118 ---EDLKPKISDFGLARILRKMILKQIQIELG---YIPPEYVGRGVYYKK 161
+D +I DFGL+ K+++ ++G YI PE V G Y +K
Sbjct: 161 SKSKDANIRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPE-VLHGTYDEK 207
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 52 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 101
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 116 LDEDLKPKISDFGLAR 131
+ D KI DFGLAR
Sbjct: 159 VKSDCTLKILDFGLAR 174
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + + K
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 126
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 127 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 176
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 52 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 101
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 102 QDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 116 LDEDLKPKISDFGLAR 131
+ D KI DFGLAR
Sbjct: 159 VKSDATLKILDFGLAR 174
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 6 GQIIAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPK 61
GQ AVK +SK K E EV L +L H N++++ E + Y L+ E
Sbjct: 75 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 134
Query: 62 RSLDYFLFDPI----RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD 117
L FD I R +D + II+ ++ G+ Y+ + I+HRDLK N+LL+
Sbjct: 135 GEL----FDEIISRKRFSEVDAAR---IIRQVLSGITYMH---KNKIVHRDLKPENLLLE 184
Query: 118 ---EDLKPKISDFGLARILRKMILKQIQIELG---YIPPEYVGRGVYYKK 161
+D +I DFGL+ K+++ ++G YI PE + G Y +K
Sbjct: 185 SKSKDANIRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVL-HGTYDEK 231
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + + K
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 112
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 113 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 6 GQIIAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPK 61
GQ AVK +SK K E EV L +L H N++++ E + Y L+ E
Sbjct: 74 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 133
Query: 62 RSLDYFLFDPI----RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD 117
L FD I R +D + II+ ++ G+ Y+ + I+HRDLK N+LL+
Sbjct: 134 GEL----FDEIISRKRFSEVDAAR---IIRQVLSGITYMH---KNKIVHRDLKPENLLLE 183
Query: 118 ---EDLKPKISDFGLARILRKMILKQIQIELG---YIPPEYVGRGVYYKK 161
+D +I DFGL+ K+++ ++G YI PE + G Y +K
Sbjct: 184 SKSKDANIRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPEVL-HGTYDEK 230
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 104 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 163
Query: 66 YFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+L ++P L K V + +G+ YL IHRDL
Sbjct: 164 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 220
Query: 113 NILLDEDLKPKISDFGLAR 131
N+L+ ED KI+DFGLAR
Sbjct: 221 NVLVTEDNVMKIADFGLAR 239
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI D GLAR
Sbjct: 153 PSNLAVNEDCELKILDAGLAR 173
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + + K
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 128
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 129 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 178
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + + K
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 128
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 129 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 178
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + + K
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 108
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 109 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 158
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 8 IIAVKKL--SKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L S+ +G E + + E+ + + L+H N++R+ + + + L+ E+ P+
Sbjct: 41 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 100
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L L R D ++ ++ + L Y E +IHRD+K N+L+ + K
Sbjct: 101 LYKELQKHGR---FDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELK 154
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + + + L Y+PPE + + +K L
Sbjct: 155 IADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + + K
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 112
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 113 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 162
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 8 IIAVKKL--SKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L S+ +G E + + E+ + + L+H N++R+ + + + L+ E+ P+
Sbjct: 42 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 101
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L L R D ++ ++ + L Y E +IHRD+K N+L+ + K
Sbjct: 102 LYKELQKHGR---FDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELK 155
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + + + L Y+PPE + + +K L
Sbjct: 156 IADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 196
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + + K
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 106
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 107 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 156
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 23 EEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKK 81
+E E + +L + ++R +G C E + +ML+ E L+ +L + + K
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKN 118
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+ ++ + G+ YL+E +HRDL N+LL KISDFGL++ LR
Sbjct: 119 IIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 66 YFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+L ++P L K V + +G+ YL IHRDL
Sbjct: 123 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 179
Query: 113 NILLDEDLKPKISDFGLAR 131
N+L+ ED KI+DFGLAR
Sbjct: 180 NVLVTEDNVMKIADFGLAR 198
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 57 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 106
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 107 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 163
Query: 116 LDEDLKPKISDFGLAR 131
+ D KI DFGLAR
Sbjct: 164 VKSDCTLKILDFGLAR 179
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 55 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 114
Query: 66 YFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+L ++P L K V + +G+ YL IHRDL
Sbjct: 115 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 171
Query: 113 NILLDEDLKPKISDFGLAR 131
N+L+ ED KI+DFGLAR
Sbjct: 172 NVLVTEDNVMKIADFGLAR 190
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 53 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 102
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 103 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 159
Query: 116 LDEDLKPKISDFGLAR 131
+ D KI DFGLAR
Sbjct: 160 VKSDCTLKILDFGLAR 175
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 8 IIAVKKL--SKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L S+ +G E + + E+ + + L+H N++R+ + + + L+ E+ P+
Sbjct: 41 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 100
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L L R D ++ ++ + L Y E +IHRD+K N+L+ + K
Sbjct: 101 LYKELQKHGR---FDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELK 154
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I+DFG + + + + L Y+PPE + + +K L
Sbjct: 155 IADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 66 YFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+L ++P L K V + +G+ YL IHRDL
Sbjct: 123 EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 179
Query: 113 NILLDEDLKPKISDFGLAR 131
N+L+ ED KI+DFGLAR
Sbjct: 180 NVLVTEDNVMKIADFGLAR 198
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 52 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 101
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 116 LDEDLKPKISDFGLAR 131
+ D KI DFGLAR
Sbjct: 159 VKSDCTLKILDFGLAR 174
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 56 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 115
Query: 66 YFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+L ++P L K V + +G+ YL IHRDL
Sbjct: 116 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 172
Query: 113 NILLDEDLKPKISDFGLAR 131
N+L+ ED KI+DFGLAR
Sbjct: 173 NVLVTEDNVMKIADFGLAR 191
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARIL 133
IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVL 179
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 144 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 185
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 52 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 101
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 158
Query: 116 LDEDLKPKISDFGLAR 131
+ D KI DFGLAR
Sbjct: 159 VKSDCTLKILDFGLAR 174
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYF 67
+A+KKLS+ F+N+ + L L++ C+ + + L+ + P++SL+ F
Sbjct: 46 VAIKKLSRP-------FQNQTHAKRAYRELVLMK---CVNHKNIIGLLNVFTPQKSLEEF 95
Query: 68 --------LFDP----IRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
L D + + LD ++ +++ ++ G+ +L IIHRDLK SNI+
Sbjct: 96 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIV 152
Query: 116 LDEDLKPKISDFGLAR 131
+ D KI DFGLAR
Sbjct: 153 VKSDCTLKILDFGLAR 168
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 52 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 111
Query: 66 YFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+L ++P L K V + +G+ YL IHRDL
Sbjct: 112 EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 168
Query: 113 NILLDEDLKPKISDFGLAR 131
N+L+ ED KI+DFGLAR
Sbjct: 169 NVLVTEDNVMKIADFGLAR 187
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARIL 133
IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVL 179
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 146 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 187
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 139 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 142 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 141 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 6 GQIIAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPK 61
GQ AVK +SK K E EV L +L H N++++ E + Y L+ E
Sbjct: 57 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTG 116
Query: 62 RSLDYFLFDPI----RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD 117
L FD I R +D + II+ ++ G+ Y+ + I+HRDLK N+LL+
Sbjct: 117 GEL----FDEIISRKRFSEVDAAR---IIRQVLSGITYMH---KNKIVHRDLKPENLLLE 166
Query: 118 ---EDLKPKISDFGLARILRKMILKQIQIELG---YIPPEYVGRGVYYKK 161
+D +I DFGL+ K+++ ++G YI PE V G Y +K
Sbjct: 167 SKSKDANIRIIDFGLSTHFEAS--KKMKDKIGTAYYIAPE-VLHGTYDEK 213
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLSQVIQME-LDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 26 KNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPI----RMLILDCKK 81
+ E+ + KL H +I++ + ++Y ++ E M L FD + R+ CK
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 257
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDLKPKISDFGLARIL-RKMI 137
+ Q LL +Q IIHRDLK N+LL +ED KI+DFG ++IL +
Sbjct: 258 YFY------QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 311
Query: 138 LKQIQIELGYIPPE 151
++ + Y+ PE
Sbjct: 312 MRTLCGTPTYLAPE 325
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 63 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 122
Query: 66 YFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+L ++P L K V + +G+ YL IHRDL
Sbjct: 123 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 179
Query: 113 NILLDEDLKPKISDFGLAR 131
N+L+ ED KI+DFGLAR
Sbjct: 180 NVLVTEDNVMKIADFGLAR 198
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 123 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 164
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARIL 133
IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVL 157
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARIL 133
IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVL 158
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 94
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 95 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 151
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
I++FG + + L Y+PPE + ++ +K L
Sbjct: 152 IANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDL 192
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
I+ L YL IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 118 IVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 159
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 9 IAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLD 65
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 48 VAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 107
Query: 66 YFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+L ++P L K V + +G+ YL IHRDL
Sbjct: 108 EYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAAR 164
Query: 113 NILLDEDLKPKISDFGLAR 131
N+L+ ED KI+DFGLAR
Sbjct: 165 NVLVTEDNVMKIADFGLAR 183
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARIL 133
IIHRDLK NILL+ED+ +I+DFG A++L
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVL 160
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 15/141 (10%)
Query: 28 EVMLTAKLQ---HLNLIR-VGFCIETQ-----EYMLIYEYMPKRSLDYFLFDPIRMLILD 78
EV L +L+ H N++R + C ++ + L++E++ + Y P L +
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 112
Query: 79 CKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR-KMI 137
K +++ ++GL +L I+HRDLK NIL+ K++DFGLARI +M
Sbjct: 113 TIK--DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA 167
Query: 138 LKQIQIELGYIPPEYVGRGVY 158
L + + L Y PE + + Y
Sbjct: 168 LFPVVVTLWYRAPEVLLQSTY 188
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 10/162 (6%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSL 64
GQ +A+++++ + E NE+++ + ++ N++ + + E ++ EY+ SL
Sbjct: 46 GQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 105
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
D + +D + + + +Q L +L +IHR++K NILL D K+
Sbjct: 106 T----DVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKL 158
Query: 125 SDFGL-ARILRKMILKQIQIELGY-IPPEYVGRGVYYKKFSL 164
+DFG A+I + + + Y + PE V R Y K +
Sbjct: 159 TDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 200
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI D GLAR
Sbjct: 153 PSNLAVNEDCELKILDGGLAR 173
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 84 HIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
+ ++ IQG+ YL +IHRDLK+ N+ L++D+ KI DFGLA
Sbjct: 146 YFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 84 HIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
+ ++ IQG+ YL +IHRDLK+ N+ L++D+ KI DFGLA
Sbjct: 146 YFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 11/153 (7%)
Query: 8 IIAVKKLSKKSTQ--GFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
I+A+K L K + G E + + EV + + L+H N++R+ G+ + LI EY P
Sbjct: 37 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP--- 93
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L + ++ D ++ I + L Y +IHRD+K N+LL + K
Sbjct: 94 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELK 150
Query: 124 ISDFGLARILRKMILKQIQIELGYIPPEYV-GR 155
I++FG + + L Y+PPE + GR
Sbjct: 151 IANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR 183
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLSQVIQME-LDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 84 HIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
+ ++ IQG+ YL +IHRDLK+ N+ L++D+ KI DFGLA
Sbjct: 130 YFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 26 KNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPI----RMLILDCKK 81
+ E+ + KL H +I++ + ++Y ++ E M L FD + R+ CK
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 243
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDLKPKISDFGLARIL-RKMI 137
+ Q LL +Q IIHRDLK N+LL +ED KI+DFG ++IL +
Sbjct: 244 YFY------QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 297
Query: 138 LKQIQIELGYIPPE 151
++ + Y+ PE
Sbjct: 298 MRTLCGTPTYLAPE 311
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 84 HIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
+ ++ IQG+ YL +IHRDLK+ N+ L++D+ KI DFGLA
Sbjct: 146 YFMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 26 KNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRVHI 85
+ E+ + KL H +I++ + ++Y ++ E M L + R+ CK +
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY- 127
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDLKPKISDFGLARILRKM-ILKQI 141
Q LL +Q IIHRDLK N+LL +ED KI+DFG ++IL + +++ +
Sbjct: 128 -----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 182
Query: 142 QIELGYIPPE---YVGRGVYYK 160
Y+ PE VG Y +
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNR 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+ K+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 28 GEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 87
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 88 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 139
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 140 GAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMP-- 60
G+++A+ K+ T+G E+ L +L H N++++ I T+ + L++E++
Sbjct: 27 GEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQD 86
Query: 61 -KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
K+ +D I + ++ + ++QGL + + ++HRDLK N+L++ +
Sbjct: 87 LKKFMDASALTGIPLPLIKS-----YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTE 138
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 139 GAIKLADFGLAR 150
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF--------LFDPIRMLILDCKKRVH-----IIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L I+ C+K +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI D GLAR
Sbjct: 153 PSNLAVNEDCELKILDRGLAR 173
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLSQVIQME-LDHERMSYLLYQMLVGIKHLHS---AGIIHRDLKPSNIVVKSDATLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 55 VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 127 FGLARI 132
FGLAR+
Sbjct: 172 FGLARV 177
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 10/128 (7%)
Query: 9 IAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE--YMPKRS 63
+A+KKLS+ T ++ E++L + H N+I + Q+ + ++ Y+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMEL 110
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
+D L I+M LD ++ +++ ++ G+ +L IIHRDLK SNI++ D K
Sbjct: 111 MDANLSQVIQME-LDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDATLK 166
Query: 124 ISDFGLAR 131
I DFGLAR
Sbjct: 167 ILDFGLAR 174
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 26 KNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRVHI 85
+ E+ + KL H +I++ + ++Y ++ E M L + R+ CK +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY- 121
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDLKPKISDFGLARIL-RKMILKQI 141
Q LL +Q IIHRDLK N+LL +ED KI+DFG ++IL +++ +
Sbjct: 122 -----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 142 QIELGYIPPE---YVGRGVYYK 160
Y+ PE VG Y +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNR 198
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 26 KNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRVHI 85
+ E+ + KL H +I++ + ++Y ++ E M L + R+ CK +
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY- 120
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDLKPKISDFGLARIL-RKMILKQI 141
Q LL +Q IIHRDLK N+LL +ED KI+DFG ++IL +++ +
Sbjct: 121 -----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 175
Query: 142 QIELGYIPPE---YVGRGVYYK 160
Y+ PE VG Y +
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNR 197
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 26 KNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPI----RMLILDCKK 81
+ E+ + KL H +I++ + ++Y ++ E M L FD + R+ CK
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGEL----FDKVVGNKRLKEATCKL 118
Query: 82 RVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDLKPKISDFGLARIL-RKMI 137
+ Q LL +Q IIHRDLK N+LL +ED KI+DFG ++IL +
Sbjct: 119 YFY------QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 172
Query: 138 LKQIQIELGYIPPE---YVGRGVYYK 160
++ + Y+ PE VG Y +
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNR 198
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
+++GL Y+ +IHRDLK SN+L++E+ + KI DFG+AR L
Sbjct: 168 LLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 114 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ +L +HRDL N +LDE
Sbjct: 174 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEK 228
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 229 FTVKVADFGLAR 240
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 14/138 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+PDG+ +A+K L + S + +E +E + A + + R+ G C+ T L+
Sbjct: 39 IPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICL-TSTVQLVT 97
Query: 57 EYMPKRSL-DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
+ MP L D+ + R L + ++ I +G+ YL++ + ++HRDL N+L
Sbjct: 98 QLMPYGCLLDHVRENRGR---LGSQDLLNWCMQIAKGMSYLED---VRLVHRDLAARNVL 151
Query: 116 LDEDLKPKISDFGLARIL 133
+ KI+DFGLAR+L
Sbjct: 152 VKSPNHVKITDFGLARLL 169
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 6 GQIIAVKKLSKKSTQGF---EEFKNEVMLTAKLQHLNLIRVGFCIE-------TQEYMLI 55
G+ +AVK S + + + E N VML +H N++ GF + + LI
Sbjct: 60 GENVAVKIFSSRDEKSWFRETELYNTVML----RHENIL--GFIASDMTSRHSSTQLWLI 113
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-EYF----RLTIIHRDLK 110
Y SL +D +++ LD + I+ I GL +L E F + I HRDLK
Sbjct: 114 THYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 169
Query: 111 VSNILLDEDLKPKISDFGLARILRKMILKQIQI 143
NIL+ ++ + I+D GLA ++ Q+ +
Sbjct: 170 SKNILVKKNGQCCIADLGLA-VMHSQSTNQLDV 201
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 26 KNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRVHI 85
+ E+ + KL H +I++ + ++Y ++ E M L + R+ CK +
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFY- 121
Query: 86 IKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDLKPKISDFGLARIL-RKMILKQI 141
Q LL +Q IIHRDLK N+LL +ED KI+DFG ++IL +++ +
Sbjct: 122 -----QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 142 QIELGYIPPE---YVGRGVYYK 160
Y+ PE VG Y +
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNR 198
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 29/173 (16%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKL-----QHLNLIRV-GFCIETQEYMLIYEYMPKR 62
+AVK L KST +E K +M K+ QH N++ + G C ++I EY
Sbjct: 79 VAVKML--KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 63 SLDYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDL 109
L FL ++P L + +H + QG+ +L IHRD+
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLAS---KNCIHRDV 192
Query: 110 KVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
N+LL KI DFGLAR + ++ ++ + ++ PE + VY
Sbjct: 193 AARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 245
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ +L +HRDL N +LDE
Sbjct: 115 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEK 169
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 170 FTVKVADFGLAR 181
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 8 IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI-ETQEYMLIYEYMPKRSLDY 66
II KKLS + Q E E + L+H N++R+ I E + LI++ + L
Sbjct: 43 IINTKKLSARDHQKLE---REARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL-- 97
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP---K 123
D + H I+ I++ +L+ + + ++HR+LK N+LL LK K
Sbjct: 98 -FEDIVAREYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVK 153
Query: 124 ISDFGLA 130
++DFGLA
Sbjct: 154 LADFGLA 160
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 86 IKGIIQGLLYLQEYFRLT-IIHRDLKVSNILLDEDLKPKISDFGLARILR 134
+K I+ LL +++ + IIHRDLK +N LL++D KI DFGLAR +
Sbjct: 133 VKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 60 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 119
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ +L +HRDL N +LDE
Sbjct: 120 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEK 174
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 175 FTVKVADFGLAR 186
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 56 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ +L +HRDL N +LDE
Sbjct: 116 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEK 170
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 171 FTVKVADFGLAR 182
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 56 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 115
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ +L +HRDL N +LDE
Sbjct: 116 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEK 170
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 171 FTVKVADFGLAR 182
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 53 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 112
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ +L +HRDL N +LDE
Sbjct: 113 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEK 167
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 168 FTVKVADFGLAR 179
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
+++GL Y+ +IHRDLK SN+L++E+ + KI DFG+AR L
Sbjct: 167 LLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Query: 5 DGQII--AVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIRV-GFCIETQ-EYMLIYEYM 59
DG+ I AVK L++ + G +F E ++ H N++ + G C+ ++ +++ YM
Sbjct: 55 DGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 114
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
L F+ + + K + + +G+ +L +HRDL N +LDE
Sbjct: 115 KHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEK 169
Query: 120 LKPKISDFGLAR 131
K++DFGLAR
Sbjct: 170 FTVKVADFGLAR 181
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 127 FGLARI 132
FGLAR+
Sbjct: 172 FGLARV 177
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 130
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 187
Query: 127 FGLARI 132
FGLAR+
Sbjct: 188 FGLARV 193
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 127 FGLARI 132
FGLAR+
Sbjct: 173 FGLARV 178
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 127 FGLARI 132
FGLAR+
Sbjct: 170 FGLARV 175
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 127 FGLARI 132
FGLAR+
Sbjct: 166 FGLARV 171
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 86 IKGIIQGLLYLQEYFRLT-IIHRDLKVSNILLDEDLKPKISDFGLARILR 134
IK I+ LL + + + IIHRDLK +N LL++D K+ DFGLAR +
Sbjct: 131 IKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 49 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 108
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 109 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 127 FGLARI 132
FGLAR+
Sbjct: 166 FGLARV 171
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 56 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 115
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 116 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 127 FGLARI 132
FGLAR+
Sbjct: 173 FGLARV 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 57 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 116
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 117 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 173
Query: 127 FGLARI 132
FGLAR+
Sbjct: 174 FGLARV 179
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 48 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 107
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 108 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 164
Query: 127 FGLARI 132
FGLAR+
Sbjct: 165 FGLARV 170
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 127 FGLARI 132
FGLAR+
Sbjct: 172 FGLARV 177
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 4 PDGQII--AVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEY 58
P G+ + AVK L + ++F EV L H NLIR+ + T ++ E
Sbjct: 32 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTEL 91
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKG--------IIQGLLYLQEYFRLTIIHRDLK 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 92 APLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLA 138
Query: 111 VSNILLDEDLKPKISDFGLARILRK-----MILKQIQIELGYIPPE 151
N+LL KI DFGL R L + ++ + ++ + PE
Sbjct: 139 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 127 FGLARI 132
FGLAR+
Sbjct: 168 FGLARV 173
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 24/158 (15%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLI-RVGFCIETQEYMLIYEYMPKRSLDYF 67
+ +K L K E F + +KL H +L+ G C+ E +L+ E++ SLD +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTY 102
Query: 68 L---FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL--DEDLKP 122
L + I +L ++ + K + + +L+E T+IH ++ NILL +ED K
Sbjct: 103 LKKNKNCINILW-----KLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKT 154
Query: 123 ------KISDFGLA-RILRKMILKQIQIELGYIPPEYV 153
K+SD G++ +L K IL++ + ++PPE +
Sbjct: 155 GNPPFIKLSDPGISITVLPKDILQE---RIPWVPPECI 189
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 59 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 118
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 119 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 175
Query: 127 FGLARI 132
FGLAR+
Sbjct: 176 FGLARV 181
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 127 FGLARI 132
FGLAR+
Sbjct: 168 FGLARV 173
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEY------------ 52
DG+ +K++ + E+ + EV AKL H+N++ C + +Y
Sbjct: 35 DGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90
Query: 53 -----MLIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHR 107
+ E+ K +L+ ++ + R LD + + + I +G+ Y+ +I+R
Sbjct: 91 KTKCLFIQMEFCDKGTLEQWI-EKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINR 146
Query: 108 DLKVSNILLDEDLKPKISDFGLARILRKMILK-QIQIELGYIPPEYVGRGVYYKKFSL 164
DLK SNI L + + KI DFGL L+ + + + L Y+ PE + Y K+ L
Sbjct: 147 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDL 204
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 115 DLYKLLKCQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 127 FGLARI 132
FGLAR+
Sbjct: 172 FGLARV 177
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 4 PDGQII--AVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEY 58
P G+ + AVK L + ++F EV L H NLIR+ + T ++ E
Sbjct: 32 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTEL 91
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKG--------IIQGLLYLQEYFRLTIIHRDLK 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 92 APLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLA 138
Query: 111 VSNILLDEDLKPKISDFGLARILRK-----MILKQIQIELGYIPPE 151
N+LL KI DFGL R L + ++ + ++ + PE
Sbjct: 139 ARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 184
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 26/153 (16%)
Query: 6 GQIIAVKKLSKKSTQGF---EEFKNEVMLTAKLQHLNLIRVGFCIE-------TQEYMLI 55
G+ +AVK S + + + E N VML +H N++ GF + + LI
Sbjct: 31 GENVAVKIFSSRDEKSWFRETELYNTVML----RHENIL--GFIASDMTSRHSSTQLWLI 84
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-EYF----RLTIIHRDLK 110
Y SL +D +++ LD + I+ I GL +L E F + I HRDLK
Sbjct: 85 THYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 111 VSNILLDEDLKPKISDFGLARILRKMILKQIQI 143
NIL+ ++ + I+D GLA ++ Q+ +
Sbjct: 141 SKNILVKKNGQCCIADLGLA-VMHSQSTNQLDV 172
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 55 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 127 FGLARI 132
FGLAR+
Sbjct: 172 FGLARV 177
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 127 FGLARI 132
FGLAR+
Sbjct: 168 FGLARV 173
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 6 GQIIAVKKLSKKSTQGF---EEFKNEVMLTAKLQHLNLIRVGFCIE-------TQEYMLI 55
G+ +AVK S + + + E N VML +H N++ GF + + LI
Sbjct: 31 GENVAVKIFSSRDEKSWFRETELYNTVML----RHENIL--GFIASDMTSRHSSTQLWLI 84
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-EYF----RLTIIHRDLK 110
Y SL +D +++ LD + I+ I GL +L E F + I HRDLK
Sbjct: 85 THYHEMGSL----YDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLK 140
Query: 111 VSNILLDEDLKPKISDFGLA 130
NIL+ ++ + I+D GLA
Sbjct: 141 SKNILVKKNGQCCIADLGLA 160
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 127 FGLARI 132
FGLAR+
Sbjct: 168 FGLARV 173
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 4 PDGQII--AVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEY 58
P G+ + AVK L + ++F EV L H NLIR+ + T ++ E
Sbjct: 42 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTEL 101
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKG--------IIQGLLYLQEYFRLTIIHRDLK 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 102 APLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLA 148
Query: 111 VSNILLDEDLKPKISDFGLARILRK-----MILKQIQIELGYIPPE 151
N+LL KI DFGL R L + ++ + ++ + PE
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE 194
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 4 PDGQII--AVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEY 58
P G+ + AVK L + ++F EV L H NLIR+ + T ++ E
Sbjct: 36 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTEL 95
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKG--------IIQGLLYLQEYFRLTIIHRDLK 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 96 APLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLA 142
Query: 111 VSNILLDEDLKPKISDFGLARILRK-----MILKQIQIELGYIPPE 151
N+LL KI DFGL R L + ++ + ++ + PE
Sbjct: 143 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 4 PDGQII--AVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEY 58
P G+ + AVK L + ++F EV L H NLIR+ + T ++ E
Sbjct: 42 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTEL 101
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKG--------IIQGLLYLQEYFRLTIIHRDLK 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 102 APLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLA 148
Query: 111 VSNILLDEDLKPKISDFGLARILRK-----MILKQIQIELGYIPPE 151
N+LL KI DFGL R L + ++ + ++ + PE
Sbjct: 149 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 194
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 3 LPDGQIIAVKKLSKKSTQGFEEFKNEVM-LTAKLQHLN----LIRVGFCIETQEYMLIYE 57
+P GQI+AVK++ ++T +E K +M L ++ ++ + G + + E
Sbjct: 73 VPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130
Query: 58 YMPKRSLDYF---LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
M SLD F + D + + D ++ + I++ L +L + +L++IHRD+K SN+
Sbjct: 131 LM-DTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHL--HSKLSVIHRDVKPSNV 185
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIEL-GYIPPEYVGRGVYYKKFSL 164
L++ + K+ DFG++ L + K I Y+ PE + + K +S+
Sbjct: 186 LINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSV 236
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 4 PDGQII--AVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEY 58
P G+ + AVK L + ++F EV L H NLIR+ + T ++ E
Sbjct: 32 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTEL 91
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKG--------IIQGLLYLQEYFRLTIIHRDLK 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 92 APLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLA 138
Query: 111 VSNILLDEDLKPKISDFGLARILRK-----MILKQIQIELGYIPPE 151
N+LL KI DFGL R L + ++ + ++ + PE
Sbjct: 139 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 184
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 51 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 110
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 111 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXD 167
Query: 127 FGLARI 132
FGLAR+
Sbjct: 168 FGLARV 173
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPK----- 61
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M +
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 107
Query: 62 --RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
RSL + + + K + + I G+ YL +HRDL N ++ ED
Sbjct: 108 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 164
Query: 120 LKPKISDFGLAR 131
KI DFG+ R
Sbjct: 165 FTVKIGDFGMTR 176
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 77 LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKM 136
LD + I++ I++GL YL + IHRD+K +N+LL E + K++DFG+A L
Sbjct: 121 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 177
Query: 137 ILKQIQIELG---YIPPEYVGRGVYYKK 161
+K+ +G ++ PE + + Y K
Sbjct: 178 QIKRNTF-VGTPFWMAPEVIKQSAYDSK 204
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N ++ E
Sbjct: 105 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 160
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 161 DFTVKIGDFGMTR 173
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N ++ E
Sbjct: 140 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 195
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 196 DFTVKIGDFGMTR 208
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 4 PDGQII--AVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEY 58
P G+ + AVK L + ++F EV L H NLIR+ + T ++ E
Sbjct: 36 PSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTEL 95
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKG--------IIQGLLYLQEYFRLTIIHRDLK 110
P SL D +R K + H + G + +G+ YL+ IHRDL
Sbjct: 96 APLGSL----LDRLR------KHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLA 142
Query: 111 VSNILLDEDLKPKISDFGLARILRK-----MILKQIQIELGYIPPE 151
N+LL KI DFGL R L + ++ + ++ + PE
Sbjct: 143 ARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE 188
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 85 IIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQ-- 142
+++ ++ GL Y+ R I+HRD+K +N+L+ D K++DFGLAR Q
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 143 ----IELGYIPPE 151
+ L Y PPE
Sbjct: 187 XNRVVTLWYRPPE 199
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N ++ E
Sbjct: 112 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 167
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 168 DFTVKIGDFGMTR 180
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N ++ E
Sbjct: 112 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 167
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 168 DFTVKIGDFGMTR 180
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 102
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N ++ E
Sbjct: 103 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 158
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 159 DFTVKIGDFGMTR 171
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N ++ E
Sbjct: 111 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 166
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 167 DFTVKIGDFGMTR 179
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 108
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N ++ E
Sbjct: 109 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 164
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 165 DFTVKIGDFGMTR 177
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 77 LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKM 136
LD + I++ I++GL YL + IHRD+K +N+LL E + K++DFG+A L
Sbjct: 101 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 137 ILKQIQIELG---YIPPEYVGRGVYYKK 161
+K+ +G ++ PE + + Y K
Sbjct: 158 QIKRNTF-VGTPFWMAPEVIKQSAYDSK 184
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRS 63
D + A+KK+ + + + +EV L A L H ++R +E + ++ + K+S
Sbjct: 30 DSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKS 88
Query: 64 L---------DYFLFDPIRMLILDCKKRVH--IIKGIIQGLLYLQEYFRLTIIHRDLKVS 112
+ L+D I L+ ++ + + + I++ L Y+ IIHR+LK
Sbjct: 89 TLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRNLKPX 145
Query: 113 NILLDEDLKPKISDFGLARILRKMI 137
NI +DE KI DFGLA+ + + +
Sbjct: 146 NIFIDESRNVKIGDFGLAKNVHRSL 170
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 12/132 (9%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPK----- 61
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M +
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 62 --RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDED 119
RSL + + + K + + I G+ YL +HRDL N ++ ED
Sbjct: 118 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174
Query: 120 LKPKISDFGLAR 131
KI DFG+ R
Sbjct: 175 FTVKIGDFGMTR 186
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N ++ E
Sbjct: 111 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 166
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 167 DFTVKIGDFGMTR 179
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 85 IIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQ-- 142
+++ ++ GL Y+ R I+HRD+K +N+L+ D K++DFGLAR Q
Sbjct: 129 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 143 ----IELGYIPPE 151
+ L Y PPE
Sbjct: 186 XNRVVTLWYRPPE 198
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 88 GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA-RILRKMILKQIQIELG 146
I++ L YL+E + +IHRD+K SNILLDE + K+ DFG++ R++ +
Sbjct: 132 AIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAA 189
Query: 147 YIPPEYV 153
Y+ PE +
Sbjct: 190 YMAPERI 196
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 69/154 (44%), Gaps = 34/154 (22%)
Query: 4 PDGQIIAVKKLSKKSTQGFEEFK------NEVMLTAKLQHL-----NLIRVGFCIETQEY 52
P GQI+AVK++ +ST +E K + VM ++ ++ L R G C E
Sbjct: 45 PSGQIMAVKRI--RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL 102
Query: 53 MLIYEYMPKRSLDYF-------LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTII 105
M S D F L D I IL I ++ L +L+E L II
Sbjct: 103 M-------STSFDKFYKYVYSVLDDVIPEEILG-----KITLATVKALNHLKE--NLKII 148
Query: 106 HRDLKVSNILLDEDLKPKISDFGLARILRKMILK 139
HRD+K SNILLD K+ DFG++ L I K
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 62/126 (49%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + I + + Y+ +
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGA 130
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 131 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICD 187
Query: 127 FGLARI 132
FGLAR+
Sbjct: 188 FGLARV 193
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 85 IIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQ-- 142
+++ ++ GL Y+ R I+HRD+K +N+L+ D K++DFGLAR Q
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 143 ----IELGYIPPE 151
+ L Y PPE
Sbjct: 187 XNRVVTLWYRPPE 199
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N ++ E
Sbjct: 118 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 174 DFTVKIGDFGMTR 186
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 85 IIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQ-- 142
+++ ++ GL Y+ R I+HRD+K +N+L+ D K++DFGLAR Q
Sbjct: 130 VMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 143 ----IELGYIPPE 151
+ L Y PPE
Sbjct: 187 XNRVVTLWYRPPE 199
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 77 LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKM 136
LD + I++ I++GL YL + IHRD+K +N+LL E + K++DFG+A L
Sbjct: 116 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172
Query: 137 ILKQIQIELG---YIPPEYVGRGVYYKK 161
+K+ +G ++ PE + + Y K
Sbjct: 173 QIKRNXF-VGTPFWMAPEVIKQSAYDSK 199
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 77 LDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKM 136
LD + I++ I++GL YL + IHRD+K +N+LL E + K++DFG+A L
Sbjct: 101 LDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 157
Query: 137 ILKQIQIELG---YIPPEYVGRGVYYKK 161
+K+ +G ++ PE + + Y K
Sbjct: 158 QIKRNXF-VGTPFWMAPEVIKQSAYDSK 184
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 87/171 (50%), Gaps = 16/171 (9%)
Query: 3 LPDGQIIAVKKLSKKSTQGFEEFKNEVM-LTAKLQHLN----LIRVGFCIETQEYMLIYE 57
+P GQI+AVK++ ++T +E K +M L ++ ++ + G + + E
Sbjct: 29 VPSGQIMAVKRI--RATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86
Query: 58 YMPKRSLDYF---LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
M SLD F + D + + D ++ + I++ L +L + +L++IHRD+K SN+
Sbjct: 87 LM-DTSLDKFYKQVIDKGQTIPEDILGKIAV--SIVKALEHL--HSKLSVIHRDVKPSNV 141
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIEL-GYIPPEYVGRGVYYKKFSL 164
L++ + K+ DFG++ L + K I Y+ PE + + K +S+
Sbjct: 142 LINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSV 192
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + +H N+I + I + + Y+ + ++
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 127 FGLARI 132
FGLAR+
Sbjct: 170 FGLARV 175
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 51 EYMLIYEYMPKRSLDYFLFDPIRM--LILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRD 108
E + E+M SLD L R+ IL +V I +I+GL YL+E + I+HRD
Sbjct: 97 EISICMEHMDGGSLDQVLKKAGRIPEQILG---KVSI--AVIKGLTYLREKHK--IMHRD 149
Query: 109 LKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYK 160
+K SNIL++ + K+ DFG++ L + Y+ PE + +G +Y
Sbjct: 150 VKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERL-QGTHYS 200
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A++K+S Q + + E+ + + +H N+I + I + + Y+ + ++
Sbjct: 55 VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 114
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 115 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 127 FGLARI 132
FGLAR+
Sbjct: 172 FGLARV 177
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 88 GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGY 147
+I+GL YL+E + I+HRD+K SNIL++ + K+ DFG++ L + + Y
Sbjct: 115 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSY 172
Query: 148 IPPEYVGRGVYYK 160
+ PE + +G +Y
Sbjct: 173 MSPERL-QGTHYS 184
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 11/121 (9%)
Query: 44 GFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLT 103
G ++ + +I EY+ S D +R D + ++K I++GL YL +
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSA----LDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK-- 141
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELG---YIPPEYVGRGVYYK 160
IHRD+K +N+LL E K++DFG+A L +K+ +G ++ PE + + Y
Sbjct: 142 -IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF-VGTPFWMAPEVIQQSAYDS 199
Query: 161 K 161
K
Sbjct: 200 K 200
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 88 GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGY 147
+I+GL YL+E + I+HRD+K SNIL++ + K+ DFG++ L + Y
Sbjct: 174 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY 231
Query: 148 IPPEYVGRGVYYK 160
+ PE + +G +Y
Sbjct: 232 MSPERL-QGTHYS 243
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 34 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 92
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 93 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAEGMNYLEDR---RLVHRDLAARNV 145
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 146 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 184
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
+++GL Y+ IIHRDLK SN+ ++ED + +I DFGLAR
Sbjct: 132 LLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 88 GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGY 147
+I+GL YL+E + I+HRD+K SNIL++ + K+ DFG++ L + Y
Sbjct: 139 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY 196
Query: 148 IPPEYVGRGVYYK 160
+ PE + +G +Y
Sbjct: 197 MSPERL-QGTHYS 208
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 72/135 (53%), Gaps = 21/135 (15%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ A+KK+ +K +G E+ + +L+H N++++ I T++ + L++E++ +
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKG------IIQGLLYLQEYFRLTIIHRDLKVSNILL 116
++ L+ C+ + + ++ G+ Y + ++HRDLK N+L+
Sbjct: 86 ---------LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLI 133
Query: 117 DEDLKPKISDFGLAR 131
+ + + KI+DFGLAR
Sbjct: 134 NREGELKIADFGLAR 148
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 72/135 (53%), Gaps = 21/135 (15%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ A+KK+ +K +G E+ + +L+H N++++ I T++ + L++E++ +
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKG------IIQGLLYLQEYFRLTIIHRDLKVSNILL 116
++ L+ C+ + + ++ G+ Y + ++HRDLK N+L+
Sbjct: 86 ---------LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLI 133
Query: 117 DEDLKPKISDFGLAR 131
+ + + KI+DFGLAR
Sbjct: 134 NREGELKIADFGLAR 148
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 72/135 (53%), Gaps = 21/135 (15%)
Query: 6 GQIIAVKKLS-KKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
G+ A+KK+ +K +G E+ + +L+H N++++ I T++ + L++E++ +
Sbjct: 26 GETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQD 85
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKG------IIQGLLYLQEYFRLTIIHRDLKVSNILL 116
++ L+ C+ + + ++ G+ Y + ++HRDLK N+L+
Sbjct: 86 ---------LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLI 133
Query: 117 DEDLKPKISDFGLAR 131
+ + + KI+DFGLAR
Sbjct: 134 NREGELKIADFGLAR 148
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 88 GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGY 147
+I+GL YL+E + I+HRD+K SNIL++ + K+ DFG++ L + Y
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY 169
Query: 148 IPPEYVGRGVYYK 160
+ PE + +G +Y
Sbjct: 170 MSPERL-QGTHYS 181
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 11 VKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFLF 69
+KK S +T +EV + +L H N++++ F + + Y L+ E L F
Sbjct: 54 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----F 109
Query: 70 DPI--RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE---DLKPKI 124
D I R + V I+K ++ G YL ++ I+HRDLK N+LL+ D KI
Sbjct: 110 DEIILRQKFSEVDAAV-IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKI 165
Query: 125 SDFGLARILRKMILKQIQIELG---YIPPE 151
DFGL+ + +++ LG YI PE
Sbjct: 166 VDFGLSAHFE--VGGKMKERLGTAYYIAPE 193
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 88 GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGY 147
+I+GL YL+E + I+HRD+K SNIL++ + K+ DFG++ L + Y
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY 169
Query: 148 IPPEYVGRGVYYK 160
+ PE + +G +Y
Sbjct: 170 MSPERL-QGTHYS 181
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 88 GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGY 147
+I+GL YL+E + I+HRD+K SNIL++ + K+ DFG++ L + Y
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY 169
Query: 148 IPPEYVGRGVYYK 160
+ PE + +G +Y
Sbjct: 170 MSPERL-QGTHYS 181
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 29/141 (20%)
Query: 6 GQIIAVKKLSK--KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G +AVKKLS+ +S + E+ L ++H N+I L+ + P RS
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIG-----------LLDVFTPARS 95
Query: 64 LDYF-------------LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLK 110
L+ F L + ++ L +I I++GL Y+ IIHRDLK
Sbjct: 96 LEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 152
Query: 111 VSNILLDEDLKPKISDFGLAR 131
SN+ ++ED + KI DFGL R
Sbjct: 153 PSNLAVNEDSELKILDFGLCR 173
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 88 GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGY 147
+I+GL YL+E + I+HRD+K SNIL++ + K+ DFG++ L + Y
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY 169
Query: 148 IPPEYVGRGVYYK 160
+ PE + +G +Y
Sbjct: 170 MSPERL-QGTHYS 181
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 88 GIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGY 147
+I+GL YL+E + I+HRD+K SNIL++ + K+ DFG++ L + Y
Sbjct: 112 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY 169
Query: 148 IPPEYVGRGVYYK 160
+ PE + +G +Y
Sbjct: 170 MSPERL-QGTHYS 181
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + +H N+I + I + + Y+ + ++
Sbjct: 53 VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET 112
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+LL+ KI D
Sbjct: 113 DLYKLLKTQHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICD 169
Query: 127 FGLARI 132
FGLAR+
Sbjct: 170 FGLARV 175
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 9 IAVKKLSKKSTQGF-EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE-YMPKRSLDY 66
+A+KK+S Q + + E+ + + +H N+I + + + + Y+ + ++
Sbjct: 71 VAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET 130
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
L+ ++ L + + I++GL Y+ ++HRDLK SN+L++ KI D
Sbjct: 131 DLYKLLKSQQLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLINTTCDLKICD 187
Query: 127 FGLARI 132
FGLARI
Sbjct: 188 FGLARI 193
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLI-RVGFCIETQEYMLIYEYMPKRSLDYF 67
+ +K L K E F + +KL H +L+ G C E +L+ E++ SLD +
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY 102
Query: 68 L---FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL--DEDLKP 122
L + I +L ++ + K + + +L+E T+IH ++ NILL +ED K
Sbjct: 103 LKKNKNCINILW-----KLEVAKQLAWAMHFLEEN---TLIHGNVCAKNILLIREEDRKT 154
Query: 123 ------KISDFGLA-RILRKMILKQIQIELGYIPPEYV 153
K+SD G++ +L K IL++ + ++PPE +
Sbjct: 155 GNPPFIKLSDPGISITVLPKDILQE---RIPWVPPECI 189
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 98
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 99 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 151
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 152 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 190
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 31 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 89
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 90 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 142
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 143 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 181
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 97
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 98 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 151 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 189
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 98
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 99 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 151
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 152 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 190
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 98
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 99 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 151
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 152 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 190
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 6 GQIIAVKKLSK---KSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPK 61
GQ AVK +SK K E EV L +L H N+ ++ E + Y L+ E
Sbjct: 51 GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTG 110
Query: 62 RSLDYFLFDPI----RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD 117
L FD I R +D + II+ ++ G+ Y + I+HRDLK N+LL+
Sbjct: 111 GEL----FDEIISRKRFSEVDAAR---IIRQVLSGITYXH---KNKIVHRDLKPENLLLE 160
Query: 118 ---EDLKPKISDFGLARILRKMILKQIQIELG---YIPPEYVGRGVYYKK 161
+D +I DFGL+ K+ + ++G YI PE V G Y +K
Sbjct: 161 SKSKDANIRIIDFGLSTHFEAS--KKXKDKIGTAYYIAPE-VLHGTYDEK 207
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 102
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 103 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 156 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 194
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 43 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 101
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 102 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 154
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 155 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 193
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 102
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 103 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 156 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 194
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 47 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 105
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 106 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 158
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 159 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 197
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 95
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 96 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 149 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 187
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 95
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 96 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 149 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 187
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 6 GQIIAVKKLSKKS-TQGFEEFKNEVMLTAKLQHLNLIRVGFCIET-QEYMLIYEYMPKRS 63
G+++A+K + K + K E+ L+H ++ ++ +ET + ++ EY P
Sbjct: 35 GEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
L ++ R+ + + RV + + I+ + Y+ HRDLK N+L DE K K
Sbjct: 95 LFDYIISQDRLS--EEETRV-VFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLK 148
Query: 124 ISDFGLA---RILRKMILKQIQIELGYIPPEYV 153
+ DFGL + + L+ L Y PE +
Sbjct: 149 LIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 62 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 120
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 121 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 173
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 174 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 72/150 (48%), Gaps = 19/150 (12%)
Query: 11 VKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYFLF 69
+KK S +T +EV + +L H N++++ F + + Y L+ E L F
Sbjct: 37 IKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL----F 92
Query: 70 DPI--RMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE---DLKPKI 124
D I R + V I+K ++ G YL ++ I+HRDLK N+LL+ D KI
Sbjct: 93 DEIILRQKFSEVDAAV-IMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKI 148
Query: 125 SDFGLARILRKMILKQIQIELG---YIPPE 151
DFGL+ + +++ LG YI PE
Sbjct: 149 VDFGLSAHFE--VGGKMKERLGTAYYIAPE 176
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 51 EYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLK 110
E + E+M SLD L + R + + +V I +++GL YL+E + I+HRD+K
Sbjct: 88 EISICMEHMDGGSLDQVLKEAKR-IPEEILGKVSI--AVLRGLAYLREKHQ--IMHRDVK 142
Query: 111 VSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYK 160
SNIL++ + K+ DFG++ L + Y+ PE + +G +Y
Sbjct: 143 PSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERL-QGTHYS 191
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 102
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 103 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 156 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 194
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 95
Query: 57 EYMP-KRSLDYFLF--DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSN 113
+ MP LDY D I L ++ I +G+ YL++ ++HRDL N
Sbjct: 96 QLMPFGXLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR---RLVHRDLAARN 147
Query: 114 ILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
+L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 148 VLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 187
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 45/178 (25%)
Query: 23 EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFL---FDP-------- 71
E+ + EV AKL H+N++ C + ++Y P+ S D +DP
Sbjct: 50 EKAEREVKALAKLDHVNIVHYNGCWDG------FDYDPETSDDSLESSDYDPENSKNSSR 103
Query: 72 -------IRMLILDC--------KKR---------VHIIKGIIQGLLYLQEYFRLTIIHR 107
I+M D K+R + + + I +G+ Y+ +IHR
Sbjct: 104 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLIHR 160
Query: 108 DLKVSNILLDEDLKPKISDFGLARILRKMILK-QIQIELGYIPPEYVGRGVYYKKFSL 164
DLK SNI L + + KI DFGL L+ + + + L Y+ PE + Y K+ L
Sbjct: 161 DLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDL 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
+++GL Y+ IIHRDLK SN+ ++ED + +I DFGLAR
Sbjct: 140 LLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKSTQGFE-EFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+A+K +++ ++ EF NE + + +++R+ G + Q ++I E M + L
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P+ + K + + I G+ YL +HRDL N + E
Sbjct: 105 YLRSLRPEMENNPV-LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAE 160
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 161 DFTVKIGDFGMTR 173
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 38 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 96
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 97 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 149
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 150 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 188
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 95
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 96 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 149 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 187
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
+++GL Y+ IIHRDLK SN+ ++ED + +I DFGLAR
Sbjct: 140 LLRGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 41 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 99
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 100 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 152
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 153 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 191
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 95
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 96 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 149 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 187
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 40 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 98
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 99 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 151
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 152 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 190
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 74/180 (41%), Gaps = 36/180 (20%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKL-----QHLNLIRV-GFCIETQEYMLIYEYMPKR 62
+AVK L KST +E K +M K+ QH N++ + G C ++I EY
Sbjct: 64 VAVKML--KSTAHADE-KEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 63 SLDYFLFDPIRMLI--------------------LDCKKRVHIIKGIIQGLLYLQEYFRL 102
L FL ++ L+ + +H + QG+ +L
Sbjct: 121 DLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK--- 177
Query: 103 TIIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRD+ N+LL KI DFGLAR + ++ ++ + ++ PE + VY
Sbjct: 178 NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVY 237
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 38 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 96
Query: 57 EYMP-KRSLDYFLF--DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSN 113
+ MP LDY D I L ++ I +G+ YL++ ++HRDL N
Sbjct: 97 QLMPFGXLLDYVREHKDNIGSQYL-----LNWCVQIAKGMNYLEDR---RLVHRDLAARN 148
Query: 114 ILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
+L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 149 VLVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 188
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 97
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 98 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 151 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 189
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 9 IAVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDY 66
+A+K L + + + EE E + +L + ++R +G C + + ML+ E L
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHK 98
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
FL + + ++ + G+ YL+E +HRDL N+LL KISD
Sbjct: 99 FLVGKREEIPVS--NVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISD 153
Query: 127 FGLARIL 133
FGL++ L
Sbjct: 154 FGLSKAL 160
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 31/138 (22%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLD 65
+II KKLS + Q E E + L+H N++R +++ + +
Sbjct: 61 AKIINTKKLSARDHQKLER---EARICRLLKHPNIVR------------LHDSISEEGFH 105
Query: 66 YFLFDPIR--MLILDCKKR--------VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
Y +FD + L D R H I I++ + ++ ++ I+HRDLK N+L
Sbjct: 106 YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH---DIVHRDLKPENLL 162
Query: 116 LDEDLKP---KISDFGLA 130
L K K++DFGLA
Sbjct: 163 LASKCKGAAVKLADFGLA 180
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 28 EVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYFLFDPIRMLILDCKKRV--H 84
EV L +LQH N+I + I + LI+EY Y +P D RV
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNP------DVSMRVIKS 136
Query: 85 IIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDLKP--KISDFGLARILRKMILK 139
+ +I G+ + +HRDLK N+LL D P KI DFGLAR + ++
Sbjct: 137 FLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIR 192
Query: 140 QIQ---IELGYIPPE 151
Q I L Y PPE
Sbjct: 193 QFTHEIITLWYRPPE 207
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA-RILRKMILKQIQIELGYIPPEYVG 154
DFGLA +I K I ++ PE V
Sbjct: 160 IDFGLAHKIDFGNEFKNIFGTPAFVAPEIVN 190
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 31/178 (17%)
Query: 6 GQIIAVKKL-SKKSTQGFEEFKNEVMLTAKLQHLNLIRV------GFCIETQEYMLIYEY 58
G+ +AVK + + F E E+ T ++H N++ G TQ Y LI +Y
Sbjct: 60 GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAADIKGTGSWTQLY-LITDY 116
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-EYF----RLTIIHRDLKVSN 113
SL +D ++ LD K + + + GL +L E F + I HRDLK N
Sbjct: 117 HENGSL----YDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKN 172
Query: 114 ILLDEDLKPKISDFGLARILRKMILKQIQIELG---------YIPPEYVGRGVYYKKF 162
IL+ ++ I+D GLA K I ++++ Y+PPE + + F
Sbjct: 173 ILVKKNGTCCIADLGLA---VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHF 227
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
G + A K + KS + E++ E+ + A H ++++ G + ++ E+ P ++
Sbjct: 36 GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 95
Query: 65 DYFLFDPIRMLILDCKKRVHII-KGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
D + + R L + ++ ++ + +++ L +L IIHRDLK N+L+ + +
Sbjct: 96 DAIMLELDRGL---TEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIR 149
Query: 124 ISDFGLA 130
++DFG++
Sbjct: 150 LADFGVS 156
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 105 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 126 -DFGLA 130
DFGLA
Sbjct: 159 IDFGLA 164
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 21/138 (15%)
Query: 9 IAVKKLSKK--STQGFEEFKNEVMLTAKLQHLNLIR-VGFCIETQEY------MLIYEYM 59
+AVK L ++ EEF E + H ++ + VG + ++ M+I +M
Sbjct: 54 VAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFM 113
Query: 60 PKRSLDYFLF------DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSN 113
L FL +P + + + V + I G+ YL IHRDL N
Sbjct: 114 KHGDLHAFLLASRIGENPFNLPL---QTLVRFMVDIACGMEYLSSR---NFIHRDLAARN 167
Query: 114 ILLDEDLKPKISDFGLAR 131
+L ED+ ++DFGL+R
Sbjct: 168 CMLAEDMTVCVADFGLSR 185
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
G + A K + KS + E++ E+ + A H ++++ G + ++ E+ P ++
Sbjct: 44 GALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103
Query: 65 DYFLFDPIRMLILDCKKRVHII-KGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPK 123
D + + R L + ++ ++ + +++ L +L IIHRDLK N+L+ + +
Sbjct: 104 DAIMLELDRGL---TEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIR 157
Query: 124 ISDFGLA 130
++DFG++
Sbjct: 158 LADFGVS 164
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 45 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 104
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 105 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 158
Query: 126 -DFGLA 130
DFGLA
Sbjct: 159 IDFGLA 164
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 85 IIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIE 144
I++ I++GL YL + IHRD+K +N+LL E K++DFG+A L +K+
Sbjct: 121 ILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF- 176
Query: 145 LG---YIPPEYVGRGVY 158
+G ++ PE + + Y
Sbjct: 177 VGTPFWMAPEVIKQSAY 193
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.4 bits (93), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
I+ GL +L + II+RDLK N+LLD+D +ISD GLA L+
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.4 bits (93), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
I+ GL +L + II+RDLK N+LLD+D +ISD GLA L+
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.4 bits (93), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
I+ GL +L + II+RDLK N+LLD+D +ISD GLA L+
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.4 bits (93), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
I+ GL +L + II+RDLK N+LLD+D +ISD GLA L+
Sbjct: 298 IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 12 KKLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFL 68
K+ +K S +G E+ + EV + ++QH N+I + E + + +LI E + L FL
Sbjct: 46 KRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL 105
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI-LLDEDL-KPKIS- 125
+ L ++ +K I+ G+ YL L I H DLK NI LLD ++ KP+I
Sbjct: 106 AEKES---LTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKI 159
Query: 126 -DFGLA 130
DFGLA
Sbjct: 160 IDFGLA 165
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.4 bits (93), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 8/127 (6%)
Query: 9 IAVKKLSKKSTQG-FEEFKNEVMLTAKLQHLNLIR-VGFCIETQEYMLIYEYMPKRSLDY 66
+A+K L + + + EE E + +L + ++R +G C + + ML+ E L
Sbjct: 366 VAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHK 424
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISD 126
FL + + ++ + G+ YL+E +HR+L N+LL KISD
Sbjct: 425 FLVG--KREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISD 479
Query: 127 FGLARIL 133
FGL++ L
Sbjct: 480 FGLSKAL 486
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
+++GL Y+ IIHRDLK N+ ++ED + KI DFGLAR
Sbjct: 137 MLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 96 LQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA-RILRKMILKQIQIELGYIPPEYV 153
L++ R I++RDLK NILLD+ +ISD GLA + +K +GY+ PE V
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 40.0 bits (92), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 96 LQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA-RILRKMILKQIQIELGYIPPEYV 153
L++ R I++RDLK NILLD+ +ISD GLA + +K +GY+ PE V
Sbjct: 299 LEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV 357
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 25/157 (15%)
Query: 7 QIIAVKKLSKKSTQGFEEFKN---EVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
++ A+K ++K+ E +N E+ + L+H L+ + + + +E M +
Sbjct: 41 KMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV------- 93
Query: 64 LDYFLFDPIRMLILDCKKRVHI--------IKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
+D L +R + ++ VH I ++ L YLQ IIHRD+K NIL
Sbjct: 94 VDLLLGGDLRYHL---QQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNIL 147
Query: 116 LDEDLKPKISDFGLARIL-RKMILKQIQIELGYIPPE 151
LDE I+DF +A +L R+ + + Y+ PE
Sbjct: 148 LDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPE 184
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 83 VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMI 137
+I + I++GL +L ++ +IHRD+K N+LL E+ + K+ DFG++ L + +
Sbjct: 132 AYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 39/168 (23%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEV-MLTAKLQHLNLIRVGFCIETQ---EYMLI----- 55
D + +AVK++ + F EV +L +H N+IR FC E +Y+ I
Sbjct: 47 DNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRY-FCTEKDRQFQYIAIELCAA 102
Query: 56 --YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSN 113
EY+ ++ + +PI +L + GL +L L I+HRDLK N
Sbjct: 103 TLQEYVEQKDFAHLGLEPITLL-----------QQTTSGLAHLHS---LNIVHRDLKPHN 148
Query: 114 ILLD-----EDLKPKISDFGLARIL---RKMILKQIQI--ELGYIPPE 151
IL+ +K ISDFGL + L R ++ + G+I PE
Sbjct: 149 ILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 7 QIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLD 65
+++AVK + + + E + E++ L+H N++R I T ++ +I EY L
Sbjct: 46 ELVAVKYIERGAAID-ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY 104
Query: 66 YFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP--K 123
+ + R + + + ++ G+ Y + I HRDLK+ N LLD P K
Sbjct: 105 ERICNAGRFSEDEAR---FFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLK 158
Query: 124 ISDFGLARILRKMILKQIQIELG---YIPPEYVGRGVYYKKFS 163
I DFG ++ ++ Q + +G YI PE + R Y K +
Sbjct: 159 ICDFGYSK--SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIA 199
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 86 IKGIIQGLLYLQEYFRLT-IIHRDLKVSNILLDEDLKPKISDFGLARIL 133
IK ++ LL +Y I+HRDLK +N L+++D K+ DFGLAR +
Sbjct: 158 IKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+++AVK + ++ + E K E++ L+H N++R I T ++ ++ EY L
Sbjct: 44 NELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
+ + R + + + +I G+ Y + + HRDLK+ N LLD P
Sbjct: 103 FERICNAGRFSEDEAR---FFFQQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRL 156
Query: 123 KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
KI+DFG ++ ++ Q + +G P Y+ V KK
Sbjct: 157 KIADFGYSKA--SVLHSQPKSAVGT--PAYIAPEVLLKK 191
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 8/152 (5%)
Query: 10 AVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLF 69
A KK+ K + + FK E+ + L H N+IR+ E + IY M +
Sbjct: 38 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE--DNTDIYLVMELCTGGELFE 95
Query: 70 DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL--DEDLKP-KISD 126
+ + I+K ++ + Y +L + HRDLK N L D P K+ D
Sbjct: 96 RVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLID 152
Query: 127 FGLARILRKMILKQIQIELGYIPPEYVGRGVY 158
FGLA + + + ++ Y V G+Y
Sbjct: 153 FGLAARFKPGKMMRTKVGTPYYVSPQVLEGLY 184
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.7 bits (91), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 92 GLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELGYIP 149
GL +LQ II+RDLK+ N++LD + KI+DFG+ + I + K YI
Sbjct: 454 GLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 510
Query: 150 PEYVGRGVYYK 160
PE + Y K
Sbjct: 511 PEIIAYQPYGK 521
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 8/152 (5%)
Query: 10 AVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLF 69
A KK+ K + + FK E+ + L H N+IR+ E + IY M +
Sbjct: 55 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE--DNTDIYLVMELCTGGELFE 112
Query: 70 DPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL--DEDLKP-KISD 126
+ + I+K ++ + Y +L + HRDLK N L D P K+ D
Sbjct: 113 RVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLID 169
Query: 127 FGLARILRKMILKQIQIELGYIPPEYVGRGVY 158
FGLA + + + ++ Y V G+Y
Sbjct: 170 FGLAARFKPGKMMRTKVGTPYYVSPQVLEGLY 201
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 186 RNVLVTENNVMKIADFGLAR 205
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 58 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 117
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 118 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 174
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 175 RNVLVTENNVMKIADFGLAR 194
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 69 TVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 186 RNVLVTENNVMKIADFGLAR 205
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 115 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 174
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 175 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 232 RNVLVTENNVMKIADFGLAR 251
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 61 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 120
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 121 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 177
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 178 RNVLVTENNVMKIADFGLAR 197
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNL 128
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 186 RNVLVTENNVMKIADFGLAR 205
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 129 REYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 186 RNVLVTENNVMKIADFGLAR 205
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 92 GLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELGYIP 149
GL +LQ II+RDLK+ N++LD + KI+DFG+ + I + K YI
Sbjct: 133 GLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 189
Query: 150 PEYVGRGVYYKK 161
PE + Y K
Sbjct: 190 PEIIAYQPYGKS 201
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 186 RNVLVTENNVMKIADFGLAR 205
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 56 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 115
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 116 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTA 172
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 173 RNVLVTENNVMKIADFGLAR 192
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 97
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 98 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFG A++L K+ E G +P +++
Sbjct: 151 LVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIKWMA 189
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 26 KNEVMLTAKLQHLNLIRVGFCIETQ-EYMLIYEYMPKRSLDYFLFDPIRMLILDCK---- 80
KNE+ + +L H LI + E + E +LI E++ LFD R+ D K
Sbjct: 96 KNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE----LFD--RIAAEDYKMSEA 149
Query: 81 KRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP--KISDFGLARILR-KMI 137
+ ++ ++ +GL ++ E+ +I+H D+K NI+ + KI DFGLA L I
Sbjct: 150 EVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206
Query: 138 LKQIQIELGYIPPEYVGR 155
+K + PE V R
Sbjct: 207 VKVTTATAEFAAPEIVDR 224
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 25 FKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLI-----LDC 79
F+ E A L H ++ V +T E +P ++Y +R ++ +
Sbjct: 59 FRREAQNAAALNHPAIVAV---YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
K+ + +I Q L + + IIHRD+K +NIL+ K+ DFG+AR +
Sbjct: 116 KRAIEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAI 166
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 37 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 95
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 96 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 148
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFG A++L K+ E G +P +++
Sbjct: 149 LVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIKWMA 187
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 44 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 102
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 103 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 155
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFG A++L K+ E G +P +++
Sbjct: 156 LVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIKWMA 194
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 97
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 98 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFG A++L K+ E G +P +++
Sbjct: 151 LVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIKWMA 189
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 39 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 97
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 98 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 150
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFG A++L K+ E G +P +++
Sbjct: 151 LVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIKWMA 189
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+K+L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 41 IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIM 99
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 100 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 152
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFG A++L K+ E G +P +++
Sbjct: 153 LVKTPQHVKITDFGRAKLLGAE-EKEYHAEGGKVPIKWMA 191
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNL 128
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 186 RNVLVTENNVMKIADFGLAR 205
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIE 144
+ +G+ +L IHRDL NILL KI DFGLAR ++ ++ ++
Sbjct: 154 VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 145 LGYIPPEYVGRGVY 158
+ ++ PE + VY
Sbjct: 211 VKWMAPESIFNCVY 224
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIE 144
+ +G+ +L IHRDL NILL KI DFGLAR ++ ++ ++
Sbjct: 170 VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 145 LGYIPPEYVGRGVY 158
+ ++ PE + VY
Sbjct: 227 VKWMAPESIFNCVY 240
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 94 LYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELGYIPPE 151
L L L II+RDLK NILLDE+ K++DFGL++ I + + Y+ PE
Sbjct: 138 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 197
Query: 152 YVGR 155
V R
Sbjct: 198 VVNR 201
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 17/164 (10%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVM----------LTAKLQHLNLIRVGFCIETQE-YMLIYE 57
+A+K + + G+ + V + A H +IR+ ETQE +ML+ E
Sbjct: 59 VAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLE 118
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD 117
P + D F + + + + R Q + +Q ++HRD+K NIL+D
Sbjct: 119 -RPLPAQDLFDYITEKGPLGEGPSRCFFG----QVVAAIQHCHSRGVVHRDIKDENILID 173
Query: 118 -EDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYK 160
K+ DFG +L Y PPE++ R Y+
Sbjct: 174 LRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHA 217
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 94 LYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELGYIPPE 151
L L L II+RDLK NILLDE+ K++DFGL++ I + + Y+ PE
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 196
Query: 152 YVGR 155
V R
Sbjct: 197 VVNR 200
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIE 144
+ +G+ +L IHRDL NILL KI DFGLAR ++ ++ ++
Sbjct: 177 VAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 145 LGYIPPEYVGRGVY 158
+ ++ PE + VY
Sbjct: 234 VKWMAPESIFNCVY 247
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIE 144
+ +G+ +L IHRDL NILL KI DFGLAR ++ ++ ++
Sbjct: 172 VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 145 LGYIPPEYVGRGVY 158
+ ++ PE + VY
Sbjct: 229 VKWMAPESIFNCVY 242
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 94 LYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELGYIPPE 151
L L L II+RDLK NILLDE+ K++DFGL++ I + + Y+ PE
Sbjct: 137 LALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE 196
Query: 152 YVGR 155
V R
Sbjct: 197 VVNR 200
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 14/159 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+++AVK + ++ + E K E++ L+H N++R I T ++ ++ EY L
Sbjct: 43 NELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 101
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
+ + R + + + +I G+ Y + + HRDLK+ N LLD P
Sbjct: 102 FERICNAGRFSEDEAR---FFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRL 155
Query: 123 KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
KI DFG ++ ++ Q + +G P Y+ V KK
Sbjct: 156 KICDFGYSK--SSVLHSQPKSTVGT--PAYIAPEVLLKK 190
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIE 144
+ +G+ +L IHRDL NILL KI DFGLAR ++ ++ ++
Sbjct: 177 VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 145 LGYIPPEYVGRGVY 158
+ ++ PE + VY
Sbjct: 234 VKWMAPESIFNCVY 247
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 17/160 (10%)
Query: 3 LPDGQ----IIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIY 56
+P+G+ +A+ +L + S + +E +E + A + + ++ R+ G C+ T LI
Sbjct: 71 IPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLIT 129
Query: 57 EYMPKRSLDYFLFDPIRMLILDCKKR--VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNI 114
+ MP L D +R + + ++ I +G+ YL++ ++HRDL N+
Sbjct: 130 QLMPFGCL----LDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNV 182
Query: 115 LLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVG 154
L+ KI+DFGLA++L K+ E G +P +++
Sbjct: 183 LVKTPQHVKITDFGLAKLLGAE-EKEYHAEGGKVPIKWMA 221
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I EY K +L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 128
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ +I+DFGLAR
Sbjct: 186 RNVLVTENNVMRIADFGLAR 205
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 7 QIIAVKKLSKKSTQG-FEEFKNEVMLTAKL-QHLNLIRV-GFCIETQ-EYMLIYEYMPKR 62
+ +AVK L + +T +E+ + + HLN++ + G C + M+I E+
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 63 SLDYFL------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL 116
+L +L F P + L D H+I Q ++ IHRDL NILL
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 177
Query: 117 DEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 178 SEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 25 FKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLI-----LDC 79
F+ E A L H ++ V +T E +P ++Y +R ++ +
Sbjct: 59 FRREAQNAAALNHPAIVAV---YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR +
Sbjct: 116 KRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 25 FKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLI-----LDC 79
F+ E A L H ++ V +T E +P ++Y +R ++ +
Sbjct: 76 FRREAQNAAALNHPAIVAV---YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 132
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR +
Sbjct: 133 KRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 183
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 94 LYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELGYIPPE 151
L L L II+RDLK NILLDE+ K++DFGL++ I + + Y+ PE
Sbjct: 141 LGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE 200
Query: 152 YVGR 155
V R
Sbjct: 201 VVNR 204
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 25 FKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLI-----LDC 79
F+ E A L H ++ V +T E +P ++Y +R ++ +
Sbjct: 59 FRREAQNAAALNHPAIVAV---YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR +
Sbjct: 116 KRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVYY 159
IHRDL NILL E+ KI DFGLAR + K + ++ L ++ PE + +Y
Sbjct: 220 CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYS 279
Query: 160 KK 161
K
Sbjct: 280 TK 281
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 11/114 (9%)
Query: 25 FKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLI-----LDC 79
F+ E A L H ++ V +T E +P ++Y +R ++ +
Sbjct: 59 FRREAQNAAALNHPAIVAV---YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTP 115
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR +
Sbjct: 116 KRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 3 LPDGQ-----IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE 57
+P GQ II KKLS + Q E E + L+H N++R +++
Sbjct: 26 IPTGQEYAAKIINTKKLSARDHQKLE---REARICRLLKHPNIVR------------LHD 70
Query: 58 YMPKRSLDYFLFDPIR--MLILDCKKRVHIIKG----IIQGLLYLQEYFRLT-IIHRDLK 110
+ + Y +FD + L D R + + IQ +L + L I+HRDLK
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLK 130
Query: 111 VSNILLDEDLKP---KISDFGLA 130
N+LL K K++DFGLA
Sbjct: 131 PENLLLASKSKGAAVKLADFGLA 153
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 30 MLTAKLQHLNLIRVGFCIETQEYML-IYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKG 88
+L+ +H L + +T+E + + EY+ L Y + + D +
Sbjct: 71 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAE 127
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
II GL +L I++RDLK+ NILLD+D KI+DFG+ + +L +
Sbjct: 128 IILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD 184
Query: 147 YIPPE 151
YI PE
Sbjct: 185 YIAPE 189
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 30 MLTAKLQHLNLIRVGFCIETQEYML-IYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKG 88
+L+ +H L + +T+E + + EY+ L Y + + D +
Sbjct: 70 VLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK---FDLSRATFYAAE 126
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
II GL +L I++RDLK+ NILLD+D KI+DFG+ +
Sbjct: 127 IILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 3 LPDGQ-----IIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYE 57
+P GQ II KKLS + Q E E + L+H N++R +++
Sbjct: 26 IPTGQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNIVR------------LHD 70
Query: 58 YMPKRSLDYFLFDPIR--MLILDCKKRVHIIKG----IIQGLLYLQEYFRLT-IIHRDLK 110
+ + Y +FD + L D R + + IQ +L + L I+HRDLK
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLK 130
Query: 111 VSNILLDEDLKP---KISDFGLA 130
N+LL K K++DFGLA
Sbjct: 131 PENLLLASKSKGAAVKLADFGLA 153
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 7 QIIAVKKLSKKSTQG-FEEFKNEVMLTAKL-QHLNLIRV-GFCIETQ-EYMLIYEYMPKR 62
+ +AVK L + +T +E+ + + HLN++ + G C + M+I E+
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 63 SLDYFL------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL 116
+L +L F P + L D H+I Q ++ IHRDL NILL
Sbjct: 118 NLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILL 177
Query: 117 DEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 178 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 85 IIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIE 144
I I++ L +L + +L++IHRD+K SN+L++ + K DFG++ L + K I
Sbjct: 141 IAVSIVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAG 198
Query: 145 L-GYIPPEYVGRGVYYKKFSL 164
Y PE + + K +S+
Sbjct: 199 CKPYXAPERINPELNQKGYSV 219
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 28 EVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHII 86
E+ L +L+H N++R+ + + + + L++E+ + YF D LD + +
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF--DSCNG-DLDPEIVKSFL 107
Query: 87 KGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR---ILRKMILKQIQI 143
+++GL + ++HRDLK N+L++ + + K++DFGLAR I + ++ +
Sbjct: 108 FQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV-V 163
Query: 144 ELGYIPPE 151
L Y PP+
Sbjct: 164 TLWYRPPD 171
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 12 KKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIET-----QEYMLIYEYMPKRSLDY 66
+KL+K Q FK E LQH N++R E+ + +L+ E +L
Sbjct: 62 RKLTKSERQ---RFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKT 118
Query: 67 FLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-KIS 125
+L R + K + I++GL +L IIHRDLK NI + KI
Sbjct: 119 YL---KRFKVXKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIG 174
Query: 126 DFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKKF 162
D GLA + R K + +G PE+ Y +K+
Sbjct: 175 DLGLATLKRASFAKAV---IG--TPEFXAPEXYEEKY 206
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 10/108 (9%)
Query: 49 TQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRD 108
T E +LI EY + + L P ++ + +IK I++G+ YL + I+H D
Sbjct: 101 TSEIILILEYAAGGEI-FSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLD 156
Query: 109 LKVSNILLDEDLKP----KISDFGLAR-ILRKMILKQIQIELGYIPPE 151
LK NILL + P KI DFG++R I L++I Y+ PE
Sbjct: 157 LKPQNILLS-SIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPE 203
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 33/144 (22%)
Query: 3 LPDGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIR-VGFCIET----QEYMLIYE 57
L DG A+K++ Q EE + E + H N++R V +C+ E L+
Sbjct: 51 LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLP 110
Query: 58 YMPKRSL-----------DYFLFDPIRMLILDCKKRVHIIKGIIQGL--LYLQEYFRLTI 104
+ + +L ++ D I L+L GI +GL ++ + Y
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLL----------GICRGLEAIHAKGY----- 155
Query: 105 IHRDLKVSNILLDEDLKPKISDFG 128
HRDLK +NILL ++ +P + D G
Sbjct: 156 AHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
II+RDLK NILLD++ KI+DFG A+ + + YI PE V Y K
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTP-DYIAPEVVSTKPYNKS 183
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 92 GLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELGYIP 149
GL +L + II+RDLK+ N++LD + KI+DFG+ + ++ + ++ YI
Sbjct: 132 GLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIA 188
Query: 150 PEYVGRGVYYKK 161
PE + Y K
Sbjct: 189 PEIIAYQPYGKS 200
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 18/142 (12%)
Query: 20 QGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDC 79
G K E+ L +L+H N+I++ + +E +Y M +Y + ML
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVM-----EYCVCGMQEMLDSVP 102
Query: 80 KKRVHIIKG------IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
+KR + + +I GL YL I+H+D+K N+LL KIS G+A L
Sbjct: 103 EKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
Query: 134 RKM----ILKQIQIELGYIPPE 151
+ Q + PPE
Sbjct: 160 HPFAADDTCRTSQGSPAFQPPE 181
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 21/119 (17%)
Query: 25 FKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLIL------- 77
F+ E A L H ++ V Y P L Y + + + + L
Sbjct: 59 FRREAQNAAALNHPAIVAV--------YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE 110
Query: 78 ---DCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
K+ + +I Q L + + IIHRD+K +NI++ K+ DFG+AR +
Sbjct: 111 GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 10/130 (7%)
Query: 7 QIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV--GFCIETQEYMLIYEYMPKRSL 64
+I+ V K + E+ K E + L+H +++ + + + YM ++E+M L
Sbjct: 55 KIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM-VFEFMDGADL 113
Query: 65 DYFLFDPIRM-LILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL--DEDLK 121
+ + + H ++ I++ L Y + IIHRD+K N+LL E+
Sbjct: 114 CFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPENVLLASKENSA 170
Query: 122 P-KISDFGLA 130
P K+ DFG+A
Sbjct: 171 PVKLGDFGVA 180
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL + +++RDLK+ N++LD+D KI+DFGL + I +K
Sbjct: 257 IVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 314
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 315 YLAPEVLEDNDYGRAVDW 332
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL + +++RDLK+ N++LD+D KI+DFGL + I +K
Sbjct: 260 IVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 317
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 318 YLAPEVLEDNDYGRAVDW 335
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 17/135 (12%)
Query: 6 GQIIAVKK-LSKKSTQGFEEFK-NEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKR 62
GQI+A+KK L + ++ E+ + +L+H NL+ + + + L++EY
Sbjct: 28 GQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYC--- 84
Query: 63 SLDYFLFDPIRMLILDCKKR---VHIIKGII-QGLLYLQEYFRLTIIHRDLKVSNILLDE 118
D + LD +R H++K I Q L + + IHRD+K NIL+ +
Sbjct: 85 -------DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITK 137
Query: 119 DLKPKISDFGLARIL 133
K+ DFG AR+L
Sbjct: 138 HSVIKLCDFGFARLL 152
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RDLK+ N++LD+D KI+DFGL + I +K
Sbjct: 118 IVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 175
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 176 YLAPEVLEDNDYGRAVDW 193
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+A+K++ +S + + F E+ +++ H N++++ G C+ L+ EY SL
Sbjct: 35 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNV 90
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL-DEDLKPKISD 126
L + + QG+ YL +IHRDLK N+LL KI D
Sbjct: 91 LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 150
Query: 127 FGLA 130
FG A
Sbjct: 151 FGTA 154
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
II L++L + II+RDLK+ N+LLD + K++DFG+ + I +
Sbjct: 133 IISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD 189
Query: 147 YIPPE 151
YI PE
Sbjct: 190 YIAPE 194
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RDLK+ N++LD+D KI+DFGL + I +K
Sbjct: 117 IVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 174
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 175 YLAPEVLEDNDYGRAVDW 192
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RDLK+ N++LD+D KI+DFGL + I +K
Sbjct: 119 IVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 176
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 177 YLAPEVLEDNDYGRAVDW 194
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 9 IAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDYF 67
+A+K++ +S + + F E+ +++ H N++++ G C+ L+ EY SL
Sbjct: 34 VAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNV 89
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-KISD 126
L + + QG+ YL +IHRDLK N+LL KI D
Sbjct: 90 LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149
Query: 127 FGLA 130
FG A
Sbjct: 150 FGTA 153
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ QG + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 44 SGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 99 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ QG + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 44 SGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 99 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 218
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 218
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I Y K +L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNL 128
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 186 RNVLVTENNVMKIADFGLAR 205
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
+I+G+ YL IIHRD+K SN+L+ ED KI+DFG++
Sbjct: 146 LIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSN 185
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+++AVK + ++ + K E++ L+H N++R I T ++ ++ EY L
Sbjct: 44 NELVAVKYI-ERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
+ + R + + + +I G+ Y + + HRDLK+ N LLD P
Sbjct: 103 FERICNAGRFSEDEAR---FFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRL 156
Query: 123 KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
KI DFG ++ ++ Q + +G P Y+ V KK
Sbjct: 157 KICDFGYSK--SSVLHSQPKSTVGT--PAYIAPEVLLKK 191
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G+++A+KK+ QG + FKN E+ + KL H N++R+ + + Y+
Sbjct: 44 SGELVAIKKV----LQG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL-NLV 97
Query: 64 LDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIHRDLKVSNILL 116
LDY R + R +I LY+ + FR I HRD+K N+LL
Sbjct: 98 LDYVPATVYR--VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLL 155
Query: 117 DEDLKP-KISDFGLARIL 133
D D K+ DFG A+ L
Sbjct: 156 DPDTAVLKLCDFGSAKQL 173
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS 63
G+++A+KK+ + + FKN E+ + KL H N++R+ + Y K+
Sbjct: 44 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRY--------FFYSSGEKKD 90
Query: 64 LDYF--LFDPIRMLILDCKK---RVHIIKGIIQGLLYLQEYFR-------LTIIHRDLKV 111
+ Y + D + + + R +I LY+ + FR I HRD+K
Sbjct: 91 VVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKP 150
Query: 112 SNILLDEDLKP-KISDFGLARIL 133
N+LLD D K+ DFG A+ L
Sbjct: 151 QNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 105 IHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVY 227
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIE 144
+ +G+ +L+ F+ + +HRDL N+L+ KI DFGLAR + ++ ++
Sbjct: 181 VAKGMEFLE--FK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP 237
Query: 145 LGYIPPEYVGRGVY 158
+ ++ PE + G+Y
Sbjct: 238 VKWMAPESLFEGIY 251
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 218
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 160 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 218
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 8 IIAVKKLSKKSTQ-GFEEFKNEV-MLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSL 64
+AVK L +T+ + +E+ M+ +H N+I + G C + +I Y K +L
Sbjct: 69 TVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNL 128
Query: 65 DYFL-----------FDPIRML--ILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKV 111
+L +D R+ + K V + +G+ YL IHRDL
Sbjct: 129 REYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 185
Query: 112 SNILLDEDLKPKISDFGLAR 131
N+L+ E+ KI+DFGLAR
Sbjct: 186 RNVLVTENNVMKIADFGLAR 205
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 44 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 99 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 19/137 (13%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIE-------TQEYMLIYEY 58
G+ +AVK S + Q + + E+ T L+H N++ GF + + LI Y
Sbjct: 31 GESVAVKIFSSRDEQSWFR-ETEIYNTVLLRHDNIL--GFIASDMTSRNSSTQLWLITHY 87
Query: 59 MPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-EYF----RLTIIHRDLKVSN 113
SL +D ++ L+ + + GL +L E F + I HRD K N
Sbjct: 88 HEHGSL----YDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRN 143
Query: 114 ILLDEDLKPKISDFGLA 130
+L+ +L+ I+D GLA
Sbjct: 144 VLVKSNLQCCIADLGLA 160
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 44 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 99 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 212 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 270
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 44 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 98
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 99 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 145
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 146 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 45 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 99
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 100 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 146
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 147 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 56 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 110
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 111 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 157
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 158 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 48 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 102
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 103 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 149
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 150 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 227
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 104 IIHRDLKVSNIL-LDEDLKP---KISDFGLARILR--KMILKQIQIELGYIPPEYVGRGV 157
++HRDLK SNIL +DE P +I DFG A+ LR +L ++ PE + R
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 158 Y 158
Y
Sbjct: 197 Y 197
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 52 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 106
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 107 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 153
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 154 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 104 IIHRDLKVSNIL-LDEDLKP---KISDFGLARILR--KMILKQIQIELGYIPPEYVGRGV 157
++HRDLK SNIL +DE P +I DFG A+ LR +L ++ PE + R
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 158 Y 158
Y
Sbjct: 202 Y 202
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 49 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 103
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 104 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 150
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 151 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 171 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVY 227
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 214 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 272
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 63 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 117
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 118 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 164
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 165 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 56 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 110
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 111 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 157
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 158 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 93 LLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
+L L+ +L II+RD+K+ NILLD + ++DFGL++
Sbjct: 169 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 80 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 134
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 135 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 181
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 182 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 78 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 133 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 179
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 206 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 264
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 78 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 133 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 179
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 180 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 57 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 111
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 112 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 158
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 159 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 34 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 93
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+ +
Sbjct: 94 LGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 148
Query: 121 KPKISDFGLARILRKMILKQI---QIELGYIPPEYVGRGVYYKKFS 163
K+ DFGL+R + + ++ + ++ PE + +++F+
Sbjct: 149 CVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESIN----FRRFT 190
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 82 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 136
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 137 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 183
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 184 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 28 EVMLTAKLQHLNLI---RVGFCIETQEYMLIYEYMPKRSLDYFLFDPIRMLILDCKKRVH 84
E+ L +L+H N+I +V ++ L+++Y D + KK V
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA---EHDLWHIIKFHRASKANKKPVQ 124
Query: 85 IIKGIIQGLLY-----LQEYFRLTIIHRDLKVSNILL----DEDLKPKISDFGLARILRK 135
+ +G+++ LLY + ++HRDLK +NIL+ E + KI+D G AR+
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 136 MI-----LKQIQIELGYIPPEYVGRGVYYKK 161
+ L + + Y PE + +Y K
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTK 215
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 37/147 (25%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIYE 57
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+ +
Sbjct: 73 GELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 127
Query: 58 YMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIHR 107
Y+P+ R ++ R +I LY+ + FR I HR
Sbjct: 128 YVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHR 174
Query: 108 DLKVSNILLDEDLKP-KISDFGLARIL 133
D+K N+LLD D K+ DFG A+ L
Sbjct: 175 DIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 219 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 277
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 68/128 (53%), Gaps = 11/128 (8%)
Query: 28 EVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHII 86
E+ L +L+H N++R+ + + + + L++E+ + YF D LD + +
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF--DSCNG-DLDPEIVKSFL 107
Query: 87 KGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR---ILRKMILKQIQI 143
+++GL + ++HRDLK N+L++ + + K+++FGLAR I + ++ +
Sbjct: 108 FQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEV-V 163
Query: 144 ELGYIPPE 151
L Y PP+
Sbjct: 164 TLWYRPPD 171
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARILRK----MILKQIQIELGYIPPEYVGRGVY 158
IHRDL NILL E KI DFGLAR + K + ++ L ++ PE + VY
Sbjct: 221 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVY 279
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 104 IIHRDLKVSNIL-LDEDLKP---KISDFGLARILR--KMILKQIQIELGYIPPEYVGRGV 157
++HRDLK SNIL +DE P +I DFG A+ LR +L ++ PE + R
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 158 Y 158
Y
Sbjct: 202 Y 202
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 37/148 (25%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCI------ETQEYM-LIY 56
G+++A+KK+ + + FKN E+ + KL H N++R+ + + + Y+ L+
Sbjct: 123 SGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 177
Query: 57 EYMPK---RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFR-------LTIIH 106
+Y+P+ R ++ R +I LY+ + FR I H
Sbjct: 178 DYVPETVYRVARHY-------------SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICH 224
Query: 107 RDLKVSNILLDEDLKP-KISDFGLARIL 133
RD+K N+LLD D K+ DFG A+ L
Sbjct: 225 RDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 93 LLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELG---YIP 149
+L L + IHRD+K N+LLD+ K++DFG + K + + +G YI
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYIS 242
Query: 150 PEYV----GRGVY 158
PE + G G Y
Sbjct: 243 PEVLKSQGGDGYY 255
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 93 LLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELG---YIP 149
+L L + IHRD+K N+LLD+ K++DFG + K + + +G YI
Sbjct: 183 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYIS 242
Query: 150 PEYV----GRGVY 158
PE + G G Y
Sbjct: 243 PEVLKSQGGDGYY 255
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 93 LLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELG---YIP 149
+L L + IHRD+K N+LLD+ K++DFG + K + + +G YI
Sbjct: 178 VLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYIS 237
Query: 150 PEYV----GRGVY 158
PE + G G Y
Sbjct: 238 PEVLKSQGGDGYY 250
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 84 HIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILL---DEDLKPKISDFGLARI--LRKMIL 138
+I++ ++ + ++ + + ++HRDLK N+L +++L+ KI DFG AR+ L
Sbjct: 110 YIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPL 166
Query: 139 KQIQIELGYIPPEYVGRGVYYKKFSL 164
K L Y PE + + Y + L
Sbjct: 167 KTPCFTLHYAAPELLNQNGYDESCDL 192
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 104 IIHRDLKVSNIL-LDEDLKP---KISDFGLARILR--KMILKQIQIELGYIPPEYVGRGV 157
++HRDLK SNIL +DE P +I DFG A+ LR +L ++ PE + R
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 158 Y 158
Y
Sbjct: 197 Y 197
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RD+K+ N++LD+D KI+DFGL + I +K
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 171 YLAPEVLEDNDYGRAVDW 188
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RD+K+ N++LD+D KI+DFGL + I +K
Sbjct: 117 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 173
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 174 YLAPEVLEDNDYGRAVDW 191
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 7 QIIAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLN--LIRVGFCIETQEYMLIYEYMPKR 62
QI A+K L + Q + ++NE+ KLQ + +IR+ T +Y+ +
Sbjct: 37 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNI 96
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L+ +L + +D +R K +++ + + ++ I+H DLK +N L+ + +
Sbjct: 97 DLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGML- 149
Query: 123 KISDFGLARILR---KMILKQIQI-ELGYIPPEYV 153
K+ DFG+A ++ ++K Q+ + Y+PPE +
Sbjct: 150 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 184
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RD+K+ N++LD+D KI+DFGL + I +K
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE 170
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 171 YLAPEVLEDNDYGRAVDW 188
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 7 QIIAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLN--LIRVGFCIETQEYMLIYEYMPKR 62
QI A+K L + Q + ++NE+ KLQ + +IR+ T +Y IY M
Sbjct: 33 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVMECG 90
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
++D + + I D +R K +++ + + ++ I+H DLK +N L+ + +
Sbjct: 91 NIDLNSWLKKKKSI-DPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGML- 145
Query: 123 KISDFGLARILR---KMILKQIQI-ELGYIPPEYV 153
K+ DFG+A ++ ++K Q+ + Y+PPE +
Sbjct: 146 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 180
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 7 QIIAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLN--LIRVGFCIETQEYMLIYEYMPKR 62
QI A+K L + Q + ++NE+ KLQ + +IR+ T +Y IY M
Sbjct: 53 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVMECG 110
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
++D + + I D +R K +++ + + ++ I+H DLK +N L+ + +
Sbjct: 111 NIDLNSWLKKKKSI-DPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGML- 165
Query: 123 KISDFGLARILR---KMILKQIQI-ELGYIPPEYV 153
K+ DFG+A ++ ++K Q+ + Y+PPE +
Sbjct: 166 KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAI 200
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 7 QIIAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLN--LIRVGFCIETQEYMLIYEYMPKR 62
QI A+K L + Q + ++NE+ KLQ + +IR+ T +Y+ +
Sbjct: 81 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNI 140
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L+ +L + +D +R K +++ + + ++ I+H DLK +N L+ + +
Sbjct: 141 DLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGML- 193
Query: 123 KISDFGLARILR---KMILKQIQI-ELGYIPPEYV 153
K+ DFG+A ++ ++K Q+ + Y+PPE +
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RD+K+ N++LD+D KI+DFGL + I +K
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 171 YLAPEVLEDNDYGRAVDW 188
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 7 QIIAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLN--LIRVGFCIETQEYMLIYEYMPKR 62
QI A+K L + Q + ++NE+ KLQ + +IR+ T +Y+ +
Sbjct: 81 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNI 140
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L+ +L + +D +R K +++ + + ++ I+H DLK +N L+ + +
Sbjct: 141 DLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGML- 193
Query: 123 KISDFGLARILR---KMILKQIQI-ELGYIPPEYV 153
K+ DFG+A ++ ++K Q+ + Y+PPE +
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 7 QIIAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLN--LIRVGFCIETQEYMLIYEYMPKR 62
QI A+K L + Q + ++NE+ KLQ + +IR+ T +Y IY M
Sbjct: 53 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVMECG 110
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
++D + + I D +R K +++ + + ++ I+H DLK +N L+ + +
Sbjct: 111 NIDLNSWLKKKKSI-DPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGML- 165
Query: 123 KISDFGLARILR---KMILKQIQI-ELGYIPPEYV 153
K+ DFG+A ++ ++K Q+ + Y+PPE +
Sbjct: 166 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RD+K+ N++LD+D KI+DFGL + I +K
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 171 YLAPEVLEDNDYGRAVDW 188
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RD+K+ N++LD+D KI+DFGL + I +K
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 170
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 171 YLAPEVLEDNDYGRAVDW 188
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 15/155 (9%)
Query: 7 QIIAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLN--LIRVGFCIETQEYMLIYEYMPKR 62
QI A+K L + Q + ++NE+ KLQ + +IR+ T +Y IY M
Sbjct: 34 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY--IYMVMECG 91
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
++D + + I D +R K +++ + + ++ I+H DLK +N L+ + +
Sbjct: 92 NIDLNSWLKKKKSI-DPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGML- 146
Query: 123 KISDFGLARILR---KMILKQIQI-ELGYIPPEYV 153
K+ DFG+A ++ ++K Q+ + Y+PPE +
Sbjct: 147 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 7 QIIAVK--KLSKKSTQGFEEFKNEVMLTAKLQHLN--LIRVGFCIETQEYMLIYEYMPKR 62
QI A+K L + Q + ++NE+ KLQ + +IR+ T +Y+ +
Sbjct: 81 QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNI 140
Query: 63 SLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP 122
L+ +L + +D +R K +++ + + ++ I+H DLK +N L+ + +
Sbjct: 141 DLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGML- 193
Query: 123 KISDFGLARILR---KMILKQIQI-ELGYIPPEYV 153
K+ DFG+A ++ ++K Q+ + Y+PPE +
Sbjct: 194 KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 10/78 (12%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELG 146
I+ L YL +++RD+K+ N++LD+D KI+DFGL + I +K
Sbjct: 119 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE 175
Query: 147 YIPPEYV-----GRGVYY 159
Y+ PE + GR V +
Sbjct: 176 YLAPEVLEDNDYGRAVDW 193
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 414 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 473
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+ +
Sbjct: 474 LGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 528
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVG 154
K+ DFGL+R + + ++ + ++ PE +
Sbjct: 529 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+++AVK + ++ + E K E++ L+H N++R I T ++ ++ EY L
Sbjct: 44 NELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
+ + R + + + +I G+ Y + + HRDLK+ N LLD P
Sbjct: 103 FERICNAGRFSEDEAR---FFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRL 156
Query: 123 KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
KI FG ++ ++ Q + +G P Y+ V KK
Sbjct: 157 KICAFGYSK--SSVLHSQPKSTVGT--PAYIAPEVLLKK 191
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 12/158 (7%)
Query: 11 VKKLSKKSTQ-GFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRS--LDYF 67
+K ++K +Q E+ + E+ + L H N+I++ E M I + L+
Sbjct: 52 IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI 111
Query: 68 LFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP----K 123
+ R L ++K ++ L Y + ++H+DLK NIL +D P K
Sbjct: 112 VSAQARGKALSEGYVAELMKQMMNALAY---FHSQHVVHKDLKPENILF-QDTSPHSPIK 167
Query: 124 ISDFGLARILRKMILKQIQIELG-YIPPEYVGRGVYYK 160
I DFGLA + + Y+ PE R V +K
Sbjct: 168 IIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFK 205
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 93 LLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELG---YIP 149
+L L + +IHRD+K N+LLD+ K++DFG + + + +G YI
Sbjct: 184 VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYIS 243
Query: 150 PEYV----GRGVYYKK 161
PE + G G Y ++
Sbjct: 244 PEVLKSQGGDGYYGRE 259
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK +++ ++ + EF NE + +++R+ G + Q +++ E M L
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 108
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P R ++ + + I G+ YL +HRDL N ++
Sbjct: 109 YLRSLRPEAENNPGRPPPT-LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAH 164
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 165 DFTVKIGDFGMTR 177
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK +++ ++ + EF NE + +++R+ G + Q +++ E M L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P R ++ + + I G+ YL +HRDL N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPT-LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAH 165
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 166 DFTVKIGDFGMTR 178
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK +++ ++ + EF NE + +++R+ G + Q +++ E M L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P R ++ + + I G+ YL +HRDL N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPT-LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAH 165
Query: 119 DLKPKISDFGLARILRKMILKQIQ----IELGYIPPEYVGRGVY 158
D KI DFG+ R + + + + + ++ PE + GV+
Sbjct: 166 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVF 209
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK +++ ++ + EF NE + +++R+ G + Q +++ E M L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P R ++ + + I G+ YL +HRDL N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPT-LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAH 165
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 166 DFTVKIGDFGMTR 178
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK +++ ++ + EF NE + +++R+ G + Q +++ E M L
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P R ++ + + I G+ YL +HRDL N ++
Sbjct: 107 YLRSLRPEAENNPGRPPPT-LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAH 162
Query: 119 DLKPKISDFGLARILRKMILKQIQ----IELGYIPPEYVGRGVY 158
D KI DFG+ R + + + + + ++ PE + GV+
Sbjct: 163 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVF 206
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
+++AVK + ++ + E K E++ L+H N++R I T ++ ++ EY L
Sbjct: 44 NELVAVKYI-ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL 102
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-- 122
+ + R + + + +I G+ Y + + HRDLK+ N LLD P
Sbjct: 103 FERICNAGRFSEDEAR---FFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRL 156
Query: 123 KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
KI FG ++ ++ Q + +G P Y+ V KK
Sbjct: 157 KICAFGYSK--SSVLHSQPKDTVGT--PAYIAPEVLLKK 191
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 34 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 93
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+ +
Sbjct: 94 LGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 148
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVG 154
K+ DFGL+R + + ++ + ++ PE +
Sbjct: 149 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK +++ ++ + EF NE + +++R+ G + Q +++ E M L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P R ++ + + I G+ YL +HRDL N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPT-LQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAH 165
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 166 DFTVKIGDFGMTR 178
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 39 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 98
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+ +
Sbjct: 99 LGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 153
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVG 154
K+ DFGL+R + + ++ + ++ PE +
Sbjct: 154 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 190
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 37 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 96
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+ +
Sbjct: 97 LGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 151
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVG 154
K+ DFGL+R + + ++ + ++ PE +
Sbjct: 152 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 188
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 34 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 93
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+ +
Sbjct: 94 LGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 148
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVG 154
K+ DFGL+R + + ++ + ++ PE +
Sbjct: 149 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 62 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 121
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+ +
Sbjct: 122 LGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 176
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVG 154
K+ DFGL+R + + ++ + ++ PE +
Sbjct: 177 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 213
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.4 bits (80), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 31 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 90
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+ +
Sbjct: 91 LGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 145
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVG 154
K+ DFGL+R + + ++ + ++ PE +
Sbjct: 146 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 182
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 11/157 (7%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 36 PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 95
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+ +
Sbjct: 96 LGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSND 150
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVG 154
K+ DFGL+R + + ++ + ++ PE +
Sbjct: 151 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 187
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 34 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 93
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+
Sbjct: 94 LGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATD 148
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVGRGVYYKKFS 163
K+ DFGL+R + + ++ + ++ PE + +++F+
Sbjct: 149 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN----FRRFT 190
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 21/138 (15%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCIETQ-------EYMLIYE 57
G+ +AVK S + + + F+ E+ T L+H N++ GF + L+ +
Sbjct: 29 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHENIL--GFIAADNKDNGTWTQLWLVSD 84
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-----EYFRLTIIHRDLKVS 112
Y SL FD + + + + + GL +L + I HRDLK
Sbjct: 85 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 140
Query: 113 NILLDEDLKPKISDFGLA 130
NIL+ ++ I+D GLA
Sbjct: 141 NILVKKNGTCCIADLGLA 158
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 21/138 (15%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCIETQ-------EYMLIYE 57
G+ +AVK S + + + F+ E+ T L+H N++ GF + L+ +
Sbjct: 27 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHENIL--GFIAADNKDNGTWTQLWLVSD 82
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-----EYFRLTIIHRDLKVS 112
Y SL FD + + + + + GL +L + I HRDLK
Sbjct: 83 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 138
Query: 113 NILLDEDLKPKISDFGLA 130
NIL+ ++ I+D GLA
Sbjct: 139 NILVKKNGTCCIADLGLA 156
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 34.3 bits (77), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 21/138 (15%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCIETQ-------EYMLIYE 57
G+ +AVK S + + + F+ E+ T L+H N++ GF + L+ +
Sbjct: 32 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHENIL--GFIAADNKDNGTWTQLWLVSD 87
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-----EYFRLTIIHRDLKVS 112
Y SL FD + + + + + GL +L + I HRDLK
Sbjct: 88 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 143
Query: 113 NILLDEDLKPKISDFGLA 130
NIL+ ++ I+D GLA
Sbjct: 144 NILVKKNGTCCIADLGLA 161
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 21/138 (15%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCIETQ-------EYMLIYE 57
G+ +AVK S + + + F+ E+ T L+H N++ GF + L+ +
Sbjct: 52 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHENIL--GFIAADNKDNGTWTQLWLVSD 107
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-----EYFRLTIIHRDLKVS 112
Y SL FD + + + + + GL +L + I HRDLK
Sbjct: 108 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 163
Query: 113 NILLDEDLKPKISDFGLA 130
NIL+ ++ I+D GLA
Sbjct: 164 NILVKKNGTCCIADLGLA 181
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 21/138 (15%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCIETQ-------EYMLIYE 57
G+ +AVK S + + + F+ E+ T L+H N++ GF + L+ +
Sbjct: 65 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHENIL--GFIAADNKDNGTWTQLWLVSD 120
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-----EYFRLTIIHRDLKVS 112
Y SL FD + + + + + GL +L + I HRDLK
Sbjct: 121 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 176
Query: 113 NILLDEDLKPKISDFGLA 130
NIL+ ++ I+D GLA
Sbjct: 177 NILVKKNGTCCIADLGLA 194
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 11/157 (7%)
Query: 4 PDGQIIAVK-KLSKKSTQGF--EEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMP 60
P+ +AV K K T E+F E + + H +++++ I +I E
Sbjct: 414 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCT 473
Query: 61 KRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDL 120
L FL +R LD + + L YL+ +HRD+ N+L+
Sbjct: 474 LGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSATD 528
Query: 121 KPKISDFGLARILRKMI---LKQIQIELGYIPPEYVG 154
K+ DFGL+R + + ++ + ++ PE +
Sbjct: 529 CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLN---LIRVGFCIETQEYM-LIYEYMPK 61
G A+K L K+ ++ ++ + LQ +N L+++ F + + ++ EYMP
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ F +R + + I +L + L +I+RDLK N+L+D+
Sbjct: 126 GDM----FSHLRRIGRFSEPHARFYAAQI--VLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 122 PKISDFGLARILR 134
K++DFG A+ ++
Sbjct: 180 IKVADFGFAKRVK 192
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 48 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 107
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 108 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 162
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 163 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 209
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLN---LIRVGFCIETQEYM-LIYEYMPK 61
G A+K L K+ ++ ++ + LQ +N L+++ F + + ++ EYMP
Sbjct: 66 GNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPG 125
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ F +R + + I +L + L +I+RDLK N+L+D+
Sbjct: 126 GDM----FSHLRRIGRFSEPHARFYAAQI--VLTFEYLHSLDLIYRDLKPENLLIDQQGY 179
Query: 122 PKISDFGLARILR 134
K++DFG A+ ++
Sbjct: 180 IKVADFGFAKRVK 192
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 21/138 (15%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKN-EVMLTAKLQHLNLIRVGFCIETQ-------EYMLIYE 57
G+ +AVK S + + + F+ E+ T L+H N++ GF + L+ +
Sbjct: 26 GEEVAVKIFSSREERSW--FREAEIYQTVMLRHENIL--GFIAADNKDNGTWTQLWLVSD 81
Query: 58 YMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQ-----EYFRLTIIHRDLKVS 112
Y SL FD + + + + + GL +L + I HRDLK
Sbjct: 82 YHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137
Query: 113 NILLDEDLKPKISDFGLA 130
NIL+ ++ I+D GLA
Sbjct: 138 NILVKKNGTCCIADLGLA 155
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 28 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 87
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 88 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 142
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 143 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 189
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 55 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 114
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 115 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 169
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 170 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 216
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 34.3 bits (77), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 10 AVKKLSKKSTQGFEEFKN----EVMLTAKLQHLNLIRVGFCIETQEYM-LIYEYMPKRSL 64
AVK L KK+ +E K+ +L ++H L+ + F +T + + + +Y+ L
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 65 DYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKI 124
Y L L+ + R + + I L YL L I++RDLK NILLD +
Sbjct: 127 FYHL--QRERCFLEPRARFYAAE-IASALGYLHS---LNIVYRDLKPENILLDSQGHIVL 180
Query: 125 SDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+DFGL ++ I PEY+ V +K+
Sbjct: 181 TDFGLC---KENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 48 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 107
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 108 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 162
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 163 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 28 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 87
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 88 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 142
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 143 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 189
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 15/159 (9%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 33 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 92
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 93 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 147
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYV 153
+D + K+ DFG +L+ + Y PPE++
Sbjct: 148 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 186
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 33 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 92
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 93 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 147
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 148 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 194
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 63/159 (39%), Gaps = 15/159 (9%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 67 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 126
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 127 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 181
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYV 153
+D + K+ DFG +L+ + Y PPE++
Sbjct: 182 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWI 220
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 61 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 120
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 121 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 175
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 176 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 222
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 60 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 119
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 120 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 174
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 175 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 221
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 32 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 91
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 92 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 146
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 147 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 193
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 31 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 90
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 91 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 145
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 146 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 192
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 47 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 106
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 107 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 161
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 162 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 208
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 47 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 106
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 107 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 161
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 162 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 208
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 48 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 107
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 108 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 162
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 163 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 209
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 28 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 87
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 88 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNXGVLHRDIKDENIL 142
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 143 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 189
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 61 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 120
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 121 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 175
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 176 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 222
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 34.3 bits (77), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 60 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 119
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 120 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 174
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 175 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 221
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 60 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 119
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 120 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 174
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 175 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 221
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 33 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 92
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 93 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 147
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 148 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 194
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 61 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 120
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 121 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 175
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 176 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 222
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.9 bits (76), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 75 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 134
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 135 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 189
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 190 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 236
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 80 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 139
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 140 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 194
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 195 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 241
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 61 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 120
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 121 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 175
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 176 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 222
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCI---------ETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 60 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 119
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 120 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 174
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 175 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 221
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARIL 133
IIHRDLKV N+LL K+ DFG A +
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 104 IIHRDLKVSNILLDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
++HRD+K NIL+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 193
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFC---------IETQEYMLI 55
D +A+K + K + E N + ++ L + GF ++LI
Sbjct: 75 DNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 134
Query: 56 YEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNIL 115
E P+ D F F R + + R Q L ++ ++HRD+K NIL
Sbjct: 135 LE-RPEPVQDLFDFITERGALQEELARSFFW----QVLEAVRHCHNCGVLHRDIKDENIL 189
Query: 116 LDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 190 IDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 236
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 104 IIHRDLKVSNILLDEDLKP-KISDFGLARILRKMILKQIQIELGYIPPEYVGRGVYYKK 161
++HRD+K NIL+D + K+ DFG +L+ + Y PPE++ Y+ +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGR 236
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 54 LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSN 113
+++E + L + + + L L C K+ II+ ++QGL YL R IIH D+K N
Sbjct: 122 MVFEVLGHHLLKWIIKSNYQGLPLPCVKK--IIQQVLQGLDYLHTKCR--IIHTDIKPEN 177
Query: 114 ILL 116
ILL
Sbjct: 178 ILL 180
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLN---LIRVGFCIETQEYM-LIYEYMPK 61
G A+K L K+ +E ++ + LQ +N L+++ F + + ++ EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ F +R + + I +L + L +I+RDLK N+++D+
Sbjct: 126 GEM----FSHLRRIGRFSEPHARFYAAQI--VLTFEYLHSLDLIYRDLKPENLMIDQQGY 179
Query: 122 PKISDFGLARILR 134
K++DFGLA+ ++
Sbjct: 180 IKVTDFGLAKRVK 192
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 54 LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSN 113
+++E + L + + + L L C K+ II+ ++QGL YL R IIH D+K N
Sbjct: 106 MVFEVLGHHLLKWIIKSNYQGLPLPCVKK--IIQQVLQGLDYLHTKCR--IIHTDIKPEN 161
Query: 114 ILLD 117
ILL
Sbjct: 162 ILLS 165
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 14 LSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIR 73
L + T F E + +V++ Q + + F E Y++ +DY++ +
Sbjct: 129 LKRAETACFRE-ERDVLVNGDCQWITALHYAFQDENHLYLV---------MDYYVGGDLL 178
Query: 74 MLILDCKKRVHIIKG---IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
L+ + ++ I + +L + +L +HRD+K N+LLD + +++DFG
Sbjct: 179 TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC 238
Query: 131 RILRKMILKQIQIELG---YIPPE 151
+ Q + +G YI PE
Sbjct: 239 LKMNDDGTVQSSVAVGTPDYISPE 262
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 14 LSKKSTQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYMLIYEYMPKRSLDYFLFDPIR 73
L + T F E + +V++ Q + + F E Y++ +DY++ +
Sbjct: 113 LKRAETACFRE-ERDVLVNGDCQWITALHYAFQDENHLYLV---------MDYYVGGDLL 162
Query: 74 MLILDCKKRVHIIKG---IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLA 130
L+ + ++ I + +L + +L +HRD+K N+LLD + +++DFG
Sbjct: 163 TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC 222
Query: 131 RILRKMILKQIQIELG---YIPPE 151
+ Q + +G YI PE
Sbjct: 223 LKMNDDGTVQSSVAVGTPDYISPE 246
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK +++ ++ + EF NE + +++R+ G + Q +++ E M L
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P R ++ + + I G+ YL +HR+L N ++
Sbjct: 111 YLRSLRPEAENNPGRPPPT-LQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAH 166
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 167 DFTVKIGDFGMTR 179
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 9 IAVKKLSKKST-QGFEEFKNEVMLTAKLQHLNLIRV-GFCIETQEYMLIYEYMPKRSLDY 66
+AVK +++ ++ + EF NE + +++R+ G + Q +++ E M L
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 67 FL--------FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDE 118
+L +P R ++ + + I G+ YL +HR+L N ++
Sbjct: 110 YLRSLRPEAENNPGRPPPT-LQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAH 165
Query: 119 DLKPKISDFGLAR 131
D KI DFG+ R
Sbjct: 166 DFTVKIGDFGMTR 178
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 101 RLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELG---YIPPEYV---- 153
+L +HRD+K NIL+D + +++DFG L + Q + +G YI PE +
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAME 252
Query: 154 -GRGVY 158
G+G Y
Sbjct: 253 GGKGRY 258
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.5 bits (75), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 93 LLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELG---YIP 149
++ + RL +HRD+K NILLD +++DFG LR + + +G Y+
Sbjct: 172 VMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLS 231
Query: 150 PE 151
PE
Sbjct: 232 PE 233
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 33.1 bits (74), Expect = 0.079, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 6 GQIIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-------LIYE 57
G+ +A+K+ ++ S + E + E+ + KL H N++ + + + L E
Sbjct: 40 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 99
Query: 58 YMPKRSLDYFL--FD--------PIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHR 107
Y L +L F+ PIR L+ D I L YL E IIHR
Sbjct: 100 YCEGGDLRKYLNQFENCCGLKEGPIRTLLSD----------ISSALRYLHEN---RIIHR 146
Query: 108 DLKVSNILLD---EDLKPKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
DLK NI+L + L KI D G A+ L + + + L Y+ PE + + Y
Sbjct: 147 DLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKY 201
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.1 bits (74), Expect = 0.079, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 6 GQIIAVKKLSKK-STQGFEEFKNEVMLTAKLQHLNLIRVGFCIETQEYM-------LIYE 57
G+ +A+K+ ++ S + E + E+ + KL H N++ + + + L E
Sbjct: 39 GEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAME 98
Query: 58 YMPKRSLDYFL--FD--------PIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHR 107
Y L +L F+ PIR L+ D I L YL E IIHR
Sbjct: 99 YCEGGDLRKYLNQFENCCGLKEGPIRTLLSD----------ISSALRYLHEN---RIIHR 145
Query: 108 DLKVSNILLD---EDLKPKISDFGLARILRK-MILKQIQIELGYIPPEYVGRGVY 158
DLK NI+L + L KI D G A+ L + + + L Y+ PE + + Y
Sbjct: 146 DLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKY 200
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ K++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 192
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.7 bits (73), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 16/64 (25%)
Query: 83 VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD-------------EDLKPKISDFGL 129
+ +++ I G+ +L L IIHRDLK NIL+ E+L+ ISDFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 130 ARIL 133
+ L
Sbjct: 193 CKKL 196
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 32.7 bits (73), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ K++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK 193
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 32.7 bits (73), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+DE +++DFG A+ ++
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK 179
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.7 bits (73), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 16/64 (25%)
Query: 83 VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD-------------EDLKPKISDFGL 129
+ +++ I G+ +L L IIHRDLK NIL+ E+L+ ISDFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 130 ARIL 133
+ L
Sbjct: 193 CKKL 196
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.7 bits (73), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 16/64 (25%)
Query: 83 VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD-------------EDLKPKISDFGL 129
+ +++ I G+ +L L IIHRDLK NIL+ E+L+ ISDFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 130 ARIL 133
+ L
Sbjct: 175 CKKL 178
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.7 bits (73), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 16/64 (25%)
Query: 83 VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD-------------EDLKPKISDFGL 129
+ +++ I G+ +L L IIHRDLK NIL+ E+L+ ISDFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 130 ARIL 133
+ L
Sbjct: 175 CKKL 178
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 6 GQIIAVKKLSKKSTQGFEEFKNEVMLTAKLQHLN---LIRVGFCIETQEYM-LIYEYMPK 61
G A+K L K+ +E ++ + LQ +N L+++ F + + ++ EY P
Sbjct: 66 GNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPG 125
Query: 62 RSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLK 121
+ F +R + + I +L + L +I+RDLK N+++D+
Sbjct: 126 GEM----FSHLRRIGRFSEPHARFYAAQI--VLTFEYLHSLDLIYRDLKPENLMIDQQGY 179
Query: 122 PKISDFGLARILR 134
+++DFGLA+ ++
Sbjct: 180 IQVTDFGLAKRVK 192
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 92 GLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
L YL E II+RDLK+ N+LLD + K++D+G+ +
Sbjct: 165 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 92 GLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
L YL E II+RDLK+ N+LLD + K++D+G+ +
Sbjct: 133 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
I+ GL L E ++HRDL NILL ++ I DF LAR
Sbjct: 143 ILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 92 GLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
L YL E II+RDLK+ N+LLD + K++D+G+ +
Sbjct: 118 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
I+ GL L E ++HRDL NILL ++ I DF LAR
Sbjct: 143 ILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAR 182
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 92 GLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLAR 131
L YL E II+RDLK+ N+LLD + K++D+G+ +
Sbjct: 122 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+++D+ K++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+++D+ K++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 192
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+++D+ K++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+++D+ K++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+++D+ K++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+++D+ K++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK 193
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 32.0 bits (71), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDED-LKPKISDFGLARILRKMILKQIQIELGY 147
++GL YL I+H D+K N+LL D + + DFG A L+ L + + Y
Sbjct: 159 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 215
Query: 148 IP 149
IP
Sbjct: 216 IP 217
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDED-LKPKISDFGLARILRKMILKQIQIELGY 147
++GL YL I+H D+K N+LL D + + DFG A L+ L + + Y
Sbjct: 173 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 229
Query: 148 IP 149
IP
Sbjct: 230 IP 231
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDED-LKPKISDFGLARILRKMILKQIQIELGY 147
++GL YL I+H D+K N+LL D + + DFG A L+ L + + Y
Sbjct: 175 ALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY 231
Query: 148 IP 149
IP
Sbjct: 232 IP 233
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 187
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 213
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 193
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 192
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 32/119 (26%)
Query: 29 VMLTAKLQHL-------NLIRVGFCIETQEYMLIY-EYMPKRS----LDYFLFDPIRMLI 76
+ + A+LQ L N++ V +C ++++I Y+ S L+ F +R +
Sbjct: 64 IRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYM 123
Query: 77 LD---CKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP-KISDFGLAR 131
L+ KR+H + I+HRD+K SN L + LK + DFGLA+
Sbjct: 124 LNLFKALKRIH----------------QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 178
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 185
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 31.6 bits (70), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLAR--ILRKMILKQIQIELGYIPPEYVGRGVYYK 160
II+RDLK NI+L+ K++DFGL + I + + Y+ PE + R + +
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNR 200
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+L+D+ +++DFG A+ ++
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK 185
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLAR 131
II+RDLK NI+L+ K++DFGL +
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 83 VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
+HI I + + +L ++HRDLK SNI D K+ DFGL +
Sbjct: 121 LHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 31.2 bits (69), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDED-LKPKISDFGLARILRKMILKQIQIELGY 147
++GL YL I+H D+K N+LL D + DFG A L+ L + + Y
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 148 IP 149
IP
Sbjct: 251 IP 252
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 54 LIYEYMPKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSN 113
+++E + L + + + L + C K II+ ++QGL YL + IIH D+K N
Sbjct: 116 MVFEVLGHHLLKWIIKSNYQGLPVRCVKS--IIRQVLQGLDYLHS--KCKIIHTDIKPEN 171
Query: 114 ILLDEDLKPKISDFGLARILRKMILKQIQIELGYIPP 150
IL+ D +R+M + + + PP
Sbjct: 172 ILMCVD----------DAYVRRMAAEATEWQKAGAPP 198
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 83 VHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKPKISDFGLARIL 133
+HI I + + +L ++HRDLK SNI D K+ DFGL +
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 214
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+++D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK 192
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN---EVMLTAKL-QHLNLIRVGFCIETQEYMLI-YEYM 59
DG I A+K+ SKK G + +N EV A L QH +++R ++MLI EY
Sbjct: 33 DGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYC 91
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQ---GLLYLQEYFRLTIIHRDLKVSNILL 116
SL + + R I+ K + ++Q GL Y+ ++++H D+K SNI +
Sbjct: 92 NGGSLADAISENYR--IMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFI 146
Query: 117 DEDLKPKIS 125
P +
Sbjct: 147 SRTSIPNAA 155
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 24/33 (72%)
Query: 102 LTIIHRDLKVSNILLDEDLKPKISDFGLARILR 134
L +I+RDLK N+++D+ +++DFG A+ ++
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK 192
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN---EVMLTAKL-QHLNLIRVGFCIETQEYMLI-YEYM 59
DG I A+K+ SKK G + +N EV A L QH +++R ++MLI EY
Sbjct: 35 DGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYC 93
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQ---GLLYLQEYFRLTIIHRDLKVSNILL 116
SL + + R I+ K + ++Q GL Y+ ++++H D+K SNI +
Sbjct: 94 NGGSLADAISENYR--IMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFI 148
Query: 117 DEDLKPKIS 125
P +
Sbjct: 149 SRTSIPNAA 157
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 89 IIQGLLYLQEYFRLTIIHRDLKVSNILLDED-LKPKISDFGLARILRKMILKQIQIELGY 147
++GL YL I+H D+K N+LL D + DFG A L+ L + + Y
Sbjct: 175 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 148 IP 149
IP
Sbjct: 232 IP 233
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN---EVMLTAKL-QHLNLIRVGFCIETQEYMLI-YEYM 59
DG I A+K+ SKK G + +N EV A L QH +++R ++MLI EY
Sbjct: 31 DGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYC 89
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQ---GLLYLQEYFRLTIIHRDLKVSNILL 116
SL + + R I+ K + ++Q GL Y+ ++++H D+K SNI +
Sbjct: 90 NGGSLADAISENYR--IMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFI 144
Query: 117 DEDLKPKIS 125
P +
Sbjct: 145 SRTSIPNAA 153
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP----KISDFGLAR-ILR 134
++ I+K I + + YL + I HRD+K N+L +P K++DFG A+
Sbjct: 115 REASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS 170
Query: 135 KMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
L + Y+ PE +G Y K +
Sbjct: 171 HNSLTEPCYTPYYVAPEVLGPEKYDKSCDM 200
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 30.4 bits (67), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 5 DGQIIAVKKLSKKSTQGFEEFKN---EVMLTAKL-QHLNLIRVGFCIETQEYMLI-YEYM 59
DG I A+K+ SKK G + +N EV A L QH +++R ++MLI EY
Sbjct: 33 DGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYC 91
Query: 60 PKRSLDYFLFDPIRMLILDCKKRVHIIKGIIQ---GLLYLQEYFRLTIIHRDLKVSNILL 116
SL + + R I+ K + ++Q GL Y+ ++++H D+K SNI +
Sbjct: 92 NGGSLADAISENYR--IMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFI 146
Query: 117 DEDLKPKIS 125
P +
Sbjct: 147 SRTSIPNAA 155
>pdb|2VWB|A Chain A, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis.
pdb|2VWB|B Chain B, Structure Of The Archaeal Kae1-Bud32 Fusion Protein
Mj1130: A Model For The Eukaryotic Ekc-Keops Subcomplex
Involved In Transcription And Telomere Homeostasis
Length = 535
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARI 132
+IH DL SN + D+DL I DFGL +I
Sbjct: 447 VIHNDLTTSNFIFDKDL--YIIDFGLGKI 473
>pdb|3ENH|A Chain A, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3ENH|B Chain B, Crystal Structure Of Cgi121BUD32KAE1 COMPLEX
pdb|3EN9|A Chain A, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
pdb|3EN9|B Chain B, Structure Of The Methanococcus Jannaschii Kae1-Bud32
Fusion Protein
Length = 540
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 104 IIHRDLKVSNILLDEDLKPKISDFGLARI 132
+IH DL SN + D+DL I DFGL +I
Sbjct: 452 VIHNDLTTSNFIFDKDL--YIIDFGLGKI 478
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.0 bits (66), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 92 GLLYLQEYFRLTIIHRDLKVSNILLDE-DLKPKISDFGLARIL 133
G L+L + + HRD+K N+L++E D K+ DFG A+ L
Sbjct: 143 GCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 29.6 bits (65), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 105 IHRDLKVSNILLDEDLKPKISDFGLARILRKMILKQIQIELG---YIPPE 151
HRD+K NIL+ D + DFG+A L Q+ +G Y PE
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPE 205
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 29.6 bits (65), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP----KISDFGLAR-ILR 134
++ I+K I + + YL + I HRD+K N+L +P K++DFG A+
Sbjct: 121 REASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS 176
Query: 135 KMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
L Y+ PE +G Y K +
Sbjct: 177 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 206
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 69 FDPIRMLILDCKKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLD-EDLKPKISDF 127
F +R + D R ++ + I++ L Y + I+HRD+K N+++D E K ++ D+
Sbjct: 121 FKQLRQTLTDYDIRFYMYE-ILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDW 176
Query: 128 GLA 130
GLA
Sbjct: 177 GLA 179
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP----KISDFGLAR-ILR 134
++ I+K I + + YL + I HRD+K N+L +P K++DFG A+
Sbjct: 131 REASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS 186
Query: 135 KMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
L Y+ PE +G Y K +
Sbjct: 187 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 216
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP----KISDFGLAR-ILR 134
++ I+K I + + YL + I HRD+K N+L +P K++DFG A+
Sbjct: 122 REASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS 177
Query: 135 KMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
L Y+ PE +G Y K +
Sbjct: 178 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 207
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP----KISDFGLAR-ILR 134
++ I+K I + + YL + I HRD+K N+L +P K++DFG A+
Sbjct: 123 REASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS 178
Query: 135 KMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
L Y+ PE +G Y K +
Sbjct: 179 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 208
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 29.6 bits (65), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP----KISDFGLAR-ILR 134
++ I+K I + + YL + I HRD+K N+L +P K++DFG A+
Sbjct: 116 REASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS 171
Query: 135 KMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
L Y+ PE +G Y K +
Sbjct: 172 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 201
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP----KISDFGLAR-ILR 134
++ I+K I + + YL + I HRD+K N+L +P K++DFG A+
Sbjct: 117 REASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS 172
Query: 135 KMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
L Y+ PE +G Y K +
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 202
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 29.6 bits (65), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 102 LTIIHRDLKVSNILLDEDLKP--KISDFGLARILRKMILKQIQIELGYIPPE 151
L+IIH DLK NILL + KI DFG + L + I + IQ Y PE
Sbjct: 178 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-YRSPE 228
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 29.6 bits (65), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 80 KKRVHIIKGIIQGLLYLQEYFRLTIIHRDLKVSNILLDEDLKP----KISDFGLAR-ILR 134
++ I+K I + + YL + I HRD+K N+L +P K++DFG A+
Sbjct: 115 REASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSK-RPNAILKLTDFGFAKETTS 170
Query: 135 KMILKQIQIELGYIPPEYVGRGVYYKKFSL 164
L Y+ PE +G Y K +
Sbjct: 171 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDM 200
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 102 LTIIHRDLKVSNILLDEDLKP--KISDFGLARILRKMILKQIQIELGYIPPE 151
L+IIH DLK NILL + KI DFG + L + I + IQ Y PE
Sbjct: 159 LSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF-YRSPE 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.328 0.148 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,596,109
Number of Sequences: 62578
Number of extensions: 171838
Number of successful extensions: 1759
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 564
Number of HSP's gapped (non-prelim): 1094
length of query: 164
length of database: 14,973,337
effective HSP length: 91
effective length of query: 73
effective length of database: 9,278,739
effective search space: 677347947
effective search space used: 677347947
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.7 bits)