Your job contains 1 sequence.
>046067
MQFSRMHKMSDGTQKFYDQPVQKLASKNWPPHQNIDHQPSSDDSNERARLSVDTFEQYCT
LESSSGTGSHGAPNSPSTASFSPEKTQVSWPNQQSYSSELYQSPDRTCGSPVSGSCITQN
ENDLRHKLRELETVMLGPDLDTPAMYNVTSPKEDQISSESERWKCLVEIISRGDLKELLC
ACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLASSGSSIYKALRC
KETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDSTAA
YARGGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHH
MPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSID
VALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPF
VNATIKTLLENYNDNYTLEERDGALFLGWKNQAIIVSSAWR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 046067
(521 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2044973 - symbol:SCL21 "AT2G04890" species:370... 956 8.4e-121 2
TAIR|locus:2164783 - symbol:PAT1 "AT5G48150" species:3702... 1119 1.9e-113 1
TAIR|locus:2008076 - symbol:SCL5 "AT1G50600" species:3702... 1082 1.6e-109 1
TAIR|locus:2026982 - symbol:SCL1 "AT1G21450" species:3702... 753 8.9e-103 4
TAIR|locus:2025022 - symbol:SCL14 "SCARECROW-like 14" spe... 509 1.8e-61 3
TAIR|locus:2201557 - symbol:RGL1 "RGA-like 1" species:370... 540 2.3e-54 2
TAIR|locus:2148293 - symbol:AT5G59450 species:3702 "Arabi... 485 3.7e-54 2
TAIR|locus:2099624 - symbol:RGL2 "RGA-like 2" species:370... 504 1.6e-53 2
TAIR|locus:2184625 - symbol:SCL8 "AT5G52510" species:3702... 512 2.0e-53 2
TAIR|locus:2157477 - symbol:RGL3 "RGA-like protein 3" spe... 480 1.6e-51 2
TAIR|locus:2006747 - symbol:GAI "GIBBERELLIC ACID INSENSI... 475 5.4e-51 2
TAIR|locus:2075155 - symbol:AT3G46600 species:3702 "Arabi... 451 1.1e-50 2
TAIR|locus:2005516 - symbol:RGA1 "REPRESSOR OF GA1-3 1" s... 467 1.4e-50 2
TAIR|locus:2080345 - symbol:SCR "SCARECROW" species:3702 ... 436 6.0e-50 2
TAIR|locus:2025032 - symbol:AT1G07520 "AT1G07520" species... 409 1.9e-47 3
TAIR|locus:2174974 - symbol:AT5G66770 "AT5G66770" species... 407 1.4e-44 2
TAIR|locus:2120106 - symbol:SHR "AT4G37650" species:3702 ... 372 2.3e-41 3
TAIR|locus:2040701 - symbol:AT2G37650 species:3702 "Arabi... 426 2.4e-41 2
TAIR|locus:2020487 - symbol:LAS "AT1G55580" species:3702 ... 406 3.2e-41 2
TAIR|locus:2101694 - symbol:AT3G50650 "AT3G50650" species... 427 4.2e-40 1
TAIR|locus:2165685 - symbol:AT5G41920 "AT5G41920" species... 368 1.5e-39 2
TAIR|locus:2008086 - symbol:SCL3 "AT1G50420" species:3702... 297 8.3e-33 2
TAIR|locus:2015243 - symbol:AT1G63100 "AT1G63100" species... 363 1.8e-32 2
TAIR|locus:2132482 - symbol:AT4G08250 "AT4G08250" species... 341 1.9e-29 1
TAIR|locus:2083073 - symbol:AT3G49950 "AT3G49950" species... 276 3.3e-26 2
TAIR|locus:2087994 - symbol:AT3G13840 "AT3G13840" species... 238 1.3e-19 3
UNIPROTKB|Q84MM9 - symbol:MOC1 "Protein MONOCULM 1" speci... 245 1.4e-19 2
UNIPROTKB|Q1AHE4 - symbol:SCL "SCARECROW-like protein" sp... 231 1.5e-18 1
TAIR|locus:2055622 - symbol:HAM1 "AT2G45160" species:3702... 245 6.2e-17 2
TAIR|locus:2101801 - symbol:HAM2 "AT3G60630" species:3702... 233 2.8e-16 1
UNIPROTKB|Q6DLS1 - symbol:SCL1 "SCARECROW-like protein" s... 228 4.9e-16 1
TAIR|locus:2126901 - symbol:HAM3 "AT4G00150" species:3702... 233 5.1e-16 2
TAIR|locus:1009023400 - symbol:AT5G67411 "AT5G67411" spec... 206 7.9e-16 1
TAIR|locus:2115340 - symbol:HAM4 "AT4G36710" species:3702... 204 2.7e-13 1
>TAIR|locus:2044973 [details] [associations]
symbol:SCL21 "AT2G04890" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003700 GO:GO:0006351 EMBL:AC006955 EMBL:AC007211
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:AF210732 EMBL:AK175210 EMBL:AK175990 EMBL:AK176099
EMBL:AK221099 EMBL:BT026455 IPI:IPI00534889 PIR:G84462
RefSeq:NP_178566.1 UniGene:At.48419 UniGene:At.71110 IntAct:Q9S7H5
EnsemblPlants:AT2G04890.1 GeneID:815036 KEGG:ath:AT2G04890
GeneFarm:4231 TAIR:At2g04890 eggNOG:NOG292869 InParanoid:Q9S7H5
OMA:HKERINI PhylomeDB:Q9S7H5 ProtClustDB:CLSN2912915
Genevestigator:Q9S7H5 Uniprot:Q9S7H5
Length = 413
Score = 956 (341.6 bits), Expect = 8.4e-121, Sum P(2) = 8.4e-121
Identities = 179/278 (64%), Positives = 223/278 (80%)
Query: 244 ATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDSTAAYAR 303
+ NGAIAEAMKDE +IHIIDF I QGSQWI LI A A+RPGG P+IRITG+ D
Sbjct: 143 SANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVGD------- 195
Query: 304 GGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMPD 363
G L V +RL KLA + VPF FNA + EV++ENL+VR GEAL VNF+ MLHH+PD
Sbjct: 196 GSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENLDVRDGEALGVNFAYMLHHLPD 255
Query: 364 ESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVAL 423
ESVS++NHRDRLLR+VK LSPKVVTLVEQE NTNT+PF RFLET+++Y A+F+SIDV L
Sbjct: 256 ESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVML 315
Query: 424 PRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNA 483
PR+ K+RIN+EQHC+AR++VN+IACEGAER+ERHE GKW+SRF MAGF PYPLS ++A
Sbjct: 316 PRNHKERINIEQHCMARDVVNIIACEGAERIERHELLGKWKSRFSMAGFEPYPLSSIISA 375
Query: 484 TIKTLLENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
TI+ LL +Y++ Y +EERDGAL+LGW ++ ++ S AW+
Sbjct: 376 TIRALLRDYSNGYAIEERDGALYLGWMDRILVSSCAWK 413
Score = 253 (94.1 bits), Expect = 8.4e-121, Sum P(2) = 8.4e-121
Identities = 51/77 (66%), Positives = 63/77 (81%)
Query: 166 LVEIISRGDLKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIA 225
+VE ISRGDLK +L ACAKA+ N++ A M E R MVS+SG+PIQRLGAYMLEGL+A
Sbjct: 41 IVEAISRGDLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVA 100
Query: 226 RLASSGSSIYKALRCKE 242
RLA+SGSSIYK+L+ +E
Sbjct: 101 RLAASGSSIYKSLQSRE 117
>TAIR|locus:2164783 [details] [associations]
symbol:PAT1 "AT5G48150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] Pfam:PF03514 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0009640
GO:GO:0004871 EMBL:AB023039 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF153443 EMBL:BT025326 EMBL:AK117483
IPI:IPI00517897 RefSeq:NP_199626.1 RefSeq:NP_974903.1
UniGene:At.7076 PRIDE:Q9LDL7 EnsemblPlants:AT5G48150.1
EnsemblPlants:AT5G48150.2 GeneID:834867 KEGG:ath:AT5G48150
GeneFarm:4233 TAIR:At5g48150 eggNOG:NOG287245 InParanoid:Q9LDL7
OMA:NSAHARG PhylomeDB:Q9LDL7 ProtClustDB:CLSN2686580
Genevestigator:Q9LDL7 Uniprot:Q9LDL7
Length = 490
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 220/350 (62%), Positives = 268/350 (76%)
Query: 175 LKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLASSGSSI 234
L++++ + I+ Y E L+A Q+ S SG I + E L S +
Sbjct: 145 LRQMVSVSGEPIQRLGAYLLEGLVA---QLAS-SGSSIYKALNRCPEPASTELLSYMHIL 200
Query: 235 YKA---LRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRI 291
Y+ + + NGAIAEAMK+EN++HIIDF I QGSQW+ LI A A+RPGGPP IRI
Sbjct: 201 YEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRI 260
Query: 292 TGIDDSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALA 351
TGIDD T+AYARGGGL IVG RL+KLA + VPFEFN+ ++S SEV+ +NL VRPGEALA
Sbjct: 261 TGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKNLGVRPGEALA 320
Query: 352 VNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNH 411
VNF+ +LHHMPDESVS +NHRDRLLR+VK LSPKVVTLVEQE+NTNTA FF RF+ETMN+
Sbjct: 321 VNFAFVLHHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNY 380
Query: 412 YGAIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAG 471
Y A+F+SIDV LPRD K RINVEQHCLAR++VN+IACEGA+RVERHE GKWRSRF MAG
Sbjct: 381 YAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHELLGKWRSRFGMAG 440
Query: 472 FTPYPLSPFVNATIKTLLENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
FTPYPLSP VN+TIK+LL NY+D Y LEERDGAL+LGW ++ ++ S AW+
Sbjct: 441 FTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGALYLGWMHRDLVASCAWK 490
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 81/158 (51%), Positives = 107/158 (67%)
Query: 90 WPNQQSYSSELYQSPDRTCGSPVSGSCITQNENDLRHKLRELETVMLGPD-LDTPAMYNV 148
+P+ Y++ + D TCGS C+T ND +HK+RE+ETVM+GPD LD + +
Sbjct: 40 FPDSPPYNALSTATYDDTCGS-----CVTDELNDFKHKIREIETVMMGPDSLDL--LVDC 92
Query: 149 TSPKEDQISSESERWKCLVEIISRGDLKELLCACAKAIENNDMYAAESLMAESRQMVSVS 208
T + S E W+ +E ISR DL+ L +CAKA+ ND+ A S+M + RQMVSVS
Sbjct: 93 TDSFDSTASQEINGWRSTLEAISRRDLRADLVSCAKAMSENDLMMAHSMMEKLRQMVSVS 152
Query: 209 GDPIQRLGAYMLEGLIARLASSGSSIYKAL-RCKETAT 245
G+PIQRLGAY+LEGL+A+LASSGSSIYKAL RC E A+
Sbjct: 153 GEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPAS 190
>TAIR|locus:2008076 [details] [associations]
symbol:SCL5 "AT1G50600" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC079279 EMBL:AC012561
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG287245 EMBL:AY034929 EMBL:AY039611 EMBL:BT000883
EMBL:AF036302 IPI:IPI00519165 PIR:E96542 PIR:T51236
RefSeq:NP_175475.2 UniGene:At.14827 STRING:Q8H125 PaxDb:Q8H125
PRIDE:Q8H125 EnsemblPlants:AT1G50600.1 GeneID:841482
KEGG:ath:AT1G50600 GeneFarm:4229 TAIR:At1g50600 InParanoid:Q8H125
OMA:REERHEP PhylomeDB:Q8H125 ProtClustDB:CLSN2918355
ArrayExpress:Q8H125 Genevestigator:Q8H125 Uniprot:Q8H125
Length = 597
Score = 1082 (385.9 bits), Expect = 1.6e-109, P = 1.6e-109
Identities = 248/542 (45%), Positives = 341/542 (62%)
Query: 1 MQFSRMHKMSDGTQKFYDQP--VQK--LASKNWPPHQNID-------HQPSSDDSNERAR 49
M+ ++ H + +G+ FY QP V++ L+ + + + ++ H ++ +N +
Sbjct: 72 MEATQKHMIQEGSSMFYHQPSSVKQMDLSVQTFDSYCTLESSSGTKSHPCLNNKNNSSST 131
Query: 50 LSVDTFEQYCTLESSSGTGSHGAPNSPSTASFSPEKTQVSWPNQQSYSSELYQSPDRTCG 109
S + E + ++++ S +SP + SP + ++ S + + +
Sbjct: 132 TSFSSNESPIS-QANNNNLSRFNNHSPEENNNSPLSGSSATNTNETELSLMLKDLETAMM 190
Query: 110 SP-VSGSCITQNENDLRHKL------RELETVMLGPDLDTPAMYNVTSPKEDQISSESER 162
P V S Q +H + R +E + G DL +Y E+ E
Sbjct: 191 EPDVDNSYNNQGGFGQQHGVVSSAMYRSMEMISRG-DLKG-VLYECAKAVENY-DLEMTD 247
Query: 163 WKCLVEIISRGDLKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEG 222
W +IS+ L++++ + ++ Y E L+A ++ SG I + +
Sbjct: 248 W-----LISQ--LQQMVSVSGEPVQRLGAYMLEGLVAR----LASSGSSIYK-ALRCKDP 295
Query: 223 LIARLASSGSSIYKA---LRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMAL 279
L + +Y+A + + NGAIAEA+K+E+ +HIIDF I+QG QW+ LI AL
Sbjct: 296 TGPELLTYMHILYEACPYFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRAL 355
Query: 280 ASRPGGPPHIRITGIDDSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQL 339
+RPGGPP++RITGIDD +++AR GGLE+VGQRL KLA++ VPFEF+ AA+ +EV++
Sbjct: 356 GARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEI 415
Query: 340 ENLEVRPGEALAVNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTA 399
E L VR GEALAVNF ++LHHMPDESV+++NHRDRLLRLVK LSP VVTLVEQEANTNTA
Sbjct: 416 EKLGVRNGEALAVNFPLVLHHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTNTA 475
Query: 400 PFFHRFLETMNHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEP 459
PF RF+ETMNHY A+F+SIDV L RD K+RINVEQHCLARE+VNLIACEG ER ERHEP
Sbjct: 476 PFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEP 535
Query: 460 FGKWRSRFIMAGFTPYPLSPFVNATIKTLLENYNDNYTLEERDGALFLGWKNQAIIVSSA 519
GKWRSRF MAGF PYPLS +VNATIK LLE+Y++ YTLEERDGAL+LGWKNQ +I S A
Sbjct: 536 LGKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGALYLGWKNQPLITSCA 595
Query: 520 WR 521
WR
Sbjct: 596 WR 597
>TAIR|locus:2026982 [details] [associations]
symbol:SCL1 "AT1G21450" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
EMBL:AC015447 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AF210731 EMBL:AY045833 EMBL:AY096626
EMBL:AY084492 EMBL:AF036300 IPI:IPI00538394 PIR:E86347 PIR:T51234
RefSeq:NP_173566.1 UniGene:At.14825 ProteinModelPortal:Q9SDQ3
STRING:Q9SDQ3 PaxDb:Q9SDQ3 PRIDE:Q9SDQ3 EnsemblPlants:AT1G21450.1
GeneID:838743 KEGG:ath:AT1G21450 GeneFarm:4232 TAIR:At1g21450
eggNOG:NOG324880 InParanoid:Q9SDQ3 OMA:SINDEWA PhylomeDB:Q9SDQ3
ProtClustDB:CLSN2913658 Genevestigator:Q9SDQ3 Uniprot:Q9SDQ3
Length = 593
Score = 753 (270.1 bits), Expect = 8.9e-103, Sum P(4) = 8.9e-103
Identities = 144/279 (51%), Positives = 197/279 (70%)
Query: 244 ATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDSTAAYAR 303
A NGAI EA+K E ++HIIDF I QG+Q++ LI ++A PG P +R+TGIDD +
Sbjct: 315 AANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRS 374
Query: 304 GGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMPD 363
GGL I+G RL +LA+ V F+F A S V L +PGE L VNF+ LHHMPD
Sbjct: 375 IGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTLGCKPGETLIVNFAFQLHHMPD 434
Query: 364 ESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVAL 423
ESV+ N RD LL +VK L+PK+VT+VEQ+ NTNT+PFF RF+E +Y A+F+S+D+ L
Sbjct: 435 ESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTL 494
Query: 424 PRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNA 483
PR+S++R+NVE+ CLAR+IVN++ACEG ER+ER+E GKWR+R +MAGF P P+S V
Sbjct: 495 PRESQERMNVERQCLARDIVNIVACEGEERIERYEAAGKWRARMMMAGFNPKPMSAKVTN 554
Query: 484 TIKTLL-ENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
I+ L+ + Y + Y L+E G L W+ +++IV+SAWR
Sbjct: 555 NIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASAWR 593
Score = 218 (81.8 bits), Expect = 8.9e-103, Sum P(4) = 8.9e-103
Identities = 46/105 (43%), Positives = 71/105 (67%)
Query: 150 SPKEDQISSESERWKCLVEIISRGDLKELLCACAKAIENNDMYAAESLMAESRQMVSVSG 209
SPKE S++S E++S+ K++L +CA+A+ + A S++ E RQ+VS+ G
Sbjct: 198 SPKESS-SADSNSHVSSKEVVSQATPKQILISCARALSEGKLEEALSMVNELRQIVSIQG 256
Query: 210 DPIQRLGAYMLEGLIARLASSGSSIYKALRCKETATNGAIAEAMK 254
DP QR+ AYM+EGL AR+A+SG IY+AL+CKE ++ +A AM+
Sbjct: 257 DPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSDERLA-AMQ 300
Score = 46 (21.3 bits), Expect = 8.9e-103, Sum P(4) = 8.9e-103
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 58 YCTLESSSGTGSHGAPNSPSTASFSPEKTQVSWPNQQSYSSELYQSP-DRTCGSPV-SGS 115
Y E+ + G A S +P T S+P+Q SY SP D P+ SG+
Sbjct: 33 YTLNENGNNNGVSSAQIFDPDRSKNPCLTDDSYPSQ-SYEKYFLDSPTDEFVQHPIGSGA 91
Query: 116 CIT 118
++
Sbjct: 92 SVS 94
Score = 45 (20.9 bits), Expect = 8.9e-103, Sum P(4) = 8.9e-103
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 120 NENDLRHKLRELETVMLGPDLD 141
++ +R K++ELE +LG + D
Sbjct: 150 DDEQMRSKIQELERALLGDEDD 171
>TAIR|locus:2025022 [details] [associations]
symbol:SCL14 "SCARECROW-like 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009410 "response to xenobiotic stimulus" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0000956 "nuclear-transcribed mRNA catabolic
process" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003700
GO:GO:0006351 GO:GO:0009410 EMBL:AC022464 InterPro:IPR005202
PROSITE:PS50985 HOGENOM:HOG000238576 EMBL:AF036309 IPI:IPI00525012
PIR:T51232 RefSeq:NP_172233.1 UniGene:At.21921 STRING:Q9XE58
PaxDb:Q9XE58 PRIDE:Q9XE58 EnsemblPlants:AT1G07530.1 GeneID:837267
KEGG:ath:AT1G07530 GeneFarm:4250 TAIR:At1g07530 eggNOG:NOG319005
OMA:HEDFVVD PhylomeDB:Q9XE58 Genevestigator:Q9XE58 Uniprot:Q9XE58
Length = 769
Score = 509 (184.2 bits), Expect = 1.8e-61, Sum P(3) = 1.8e-61
Identities = 108/278 (38%), Positives = 161/278 (57%)
Query: 246 NGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALA-SRPGGPPHIRITGIDDSTAAYARG 304
N ++ + N IHIIDF I+ G QW LI L+ SRPGG P +RITGI+ +
Sbjct: 488 NHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPA 547
Query: 305 GGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMPDE 364
G++ G RL++ + VPFE+NA A +Q+E+L++R GE + VN ++ DE
Sbjct: 548 EGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLLDE 607
Query: 365 SVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFF-HRFLETMNHYGAIFDSIDVAL 423
+V + + RD +L+L++ ++P V N N APFF RF E + HY A+FD D L
Sbjct: 608 TVLVNSPRDAVLKLIRKINPNVFIPAILSGNYN-APFFVTRFREALFHYSAVFDMCDSKL 666
Query: 424 PRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNA 483
R+ + R+ E+ REIVN++ACEG ERVER E + +W++R I AGF PL +
Sbjct: 667 AREDEMRLMYEKEFYGREIVNVVACEGTERVERPETYKQWQARLIRAGFRQLPLEKELMQ 726
Query: 484 TIKTLLEN-YNDNYTLEERDGALFLGWKNQAIIVSSAW 520
+K +EN Y+ N+ +++ L GWK + + SS W
Sbjct: 727 NLKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYASSLW 764
Score = 121 (47.7 bits), Expect = 1.8e-61, Sum P(3) = 1.8e-61
Identities = 27/71 (38%), Positives = 41/71 (57%)
Query: 174 DLKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLASSGSS 233
DL+ LL CA+A+ +D A ++ + R+ S G+ +RL Y L ARLA +G+
Sbjct: 392 DLRTLLVLCAQAVSVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQ 451
Query: 234 IYKALRCKETA 244
IY AL K+T+
Sbjct: 452 IYTALSSKKTS 462
Score = 39 (18.8 bits), Expect = 1.8e-61, Sum P(3) = 1.8e-61
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 34 NIDHQPSSDDSNERARLSVDTFEQYCTLESSSGTGSH----GAPNSPS 77
++DH + S F Y + +++ + SH G N PS
Sbjct: 135 SVDHPERLASDSPDGSCSGGAFSDYASTTTTTSSDSHWSVDGLENRPS 182
>TAIR|locus:2201557 [details] [associations]
symbol:RGL1 "RGA-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IMP]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IGI;RCA] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0009737 GO:GO:0005634 GO:GO:0030154 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0009908 GO:GO:0042538
GO:GO:2000377 EMBL:AC020665 GO:GO:0040029 GO:GO:0009867
GO:GO:0009863 GO:GO:0009740 HOGENOM:HOG000238577 KO:K14494
GO:GO:0009938 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AJ224957 EMBL:AY048749 EMBL:AY070035
EMBL:AY096506 IPI:IPI00518407 PIR:G96688 RefSeq:NP_176809.1
UniGene:At.26400 UniGene:At.75607 ProteinModelPortal:Q9C8Y3
SMR:Q9C8Y3 IntAct:Q9C8Y3 STRING:Q9C8Y3 EnsemblPlants:AT1G66350.1
GeneID:842953 KEGG:ath:AT1G66350 GeneFarm:4239 TAIR:At1g66350
eggNOG:NOG314007 InParanoid:Q9C8Y3 OMA:TSAWRIN PhylomeDB:Q9C8Y3
ProtClustDB:CLSN2914366 Genevestigator:Q9C8Y3 GermOnline:AT1G66350
Uniprot:Q9C8Y3
Length = 511
Score = 540 (195.1 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 140/395 (35%), Positives = 211/395 (53%)
Query: 152 KEDQISSESERWKCLVEIISRGD---LKELLCACAKAIENNDMYAAESLMAESRQMVSVS 208
K +I SE + +V + S+ L L ACA+A++ N++ A++L+ + S
Sbjct: 126 KRTRIESELSSTRSVVVLDSQETGVRLVHALLACAEAVQQNNLKLADALVKHVGLLASSQ 185
Query: 209 GDPIQRLGAYMLEGLIARL---------ASSGSS------IYKA---LRCKETATNGAIA 250
++++ Y EGL R+ A S S Y++ L+ N AI
Sbjct: 186 AGAMRKVATYFAEGLARRIYRIYPRDDVALSSFSDTLQIHFYESCPYLKFAHFTANQAIL 245
Query: 251 EAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDSTAAYARGGGLEIV 310
E K+H+ID + G QW LI ALA RP GPP R+TGI S ++ V
Sbjct: 246 EVFATAEKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLT------DIQEV 299
Query: 311 GQRLSKLADLYKVPFEFNAAAISG-SEVQLENLEVRPG-EALAVNFSMMLHHMPDESVSI 368
G +L +LA V FEF + A++ S+++ E L++RPG E++AVN LH + SI
Sbjct: 300 GWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRPGLESVAVNSVFELHRLLAHPGSI 359
Query: 369 QNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVALPRDSK 428
D+ L +K + P ++T+VEQEAN N F RF E++++Y ++FDS++ P S+
Sbjct: 360 ----DKFLSTIKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLE-GPP--SQ 412
Query: 429 DRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATIKTL 488
DR+ E L R+I+NL+ACEG +RVERHE +WR+RF + GF P + L
Sbjct: 413 DRVMSELF-LGRQILNLVACEGEDRVERHETLNQWRNRFGLGGFKPVSIGSNAYKQASML 471
Query: 489 LENYN--DNYTLEERDGALFLGWKNQAIIVSSAWR 521
L Y D Y +EE +G L LGW+ + +I +SAWR
Sbjct: 472 LALYAGADGYNVEENEGCLLLGWQTRPLIATSAWR 506
Score = 39 (18.8 bits), Expect = 2.3e-54, Sum P(2) = 2.3e-54
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 123 DLRHKLRELETVM 135
D+ HKL +LE V+
Sbjct: 49 DVAHKLEQLEMVL 61
>TAIR|locus:2148293 [details] [associations]
symbol:AT5G59450 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010200 "response to chitin" evidence=IEP;RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AB025604
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY035001 EMBL:AY062942
EMBL:AF036307 IPI:IPI00541926 PIR:T51233 RefSeq:NP_200753.1
UniGene:At.29225 UniGene:At.63919 UniGene:At.72775 STRING:Q9LTI5
EnsemblPlants:AT5G59450.1 GeneID:836064 KEGG:ath:AT5G59450
GeneFarm:4255 TAIR:At5g59450 eggNOG:NOG254902 HOGENOM:HOG000238576
InParanoid:Q9LTI5 OMA:KPATISK PhylomeDB:Q9LTI5
ProtClustDB:CLSN2685117 Genevestigator:Q9LTI5 Uniprot:Q9LTI5
Length = 610
Score = 485 (175.8 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 97/281 (34%), Positives = 155/281 (55%)
Query: 244 ATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDSTAAYAR 303
A N +I E K+HI+DF + G QW L+ AL+ RPGGPP +R+TGI+ A +
Sbjct: 318 AANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTGIELPQAGFRP 377
Query: 304 GGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMPD 363
+E G+RL + D + VPFEFN A + L+ L + PGE VN L + PD
Sbjct: 378 SDRVEETGRRLKRFCDQFNVPFEFNFIAKKWETITLDELMINPGETTVVNCIHRLQYTPD 437
Query: 364 ESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVAL 423
E+VS+ + RD +L+L + ++P + E N+ F RF E + HY ++FD D +
Sbjct: 438 ETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTTI 497
Query: 424 PRDS--KDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFV 481
+ K+R +E+ L R+ +++I+CEGAER R E + +WR R + AGF P +S +
Sbjct: 498 HAEDEYKNRSLLERELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQI 557
Query: 482 NATIKTLL-ENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
K ++ + Y+ ++ ++ + + GWK + I S W+
Sbjct: 558 MKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWK 598
Score = 92 (37.4 bits), Expect = 3.7e-54, Sum P(2) = 3.7e-54
Identities = 22/57 (38%), Positives = 30/57 (52%)
Query: 174 DLKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLASS 230
DL+ LL CA+A+ + D A + E R S +GD QRL Y E L AR+ +
Sbjct: 223 DLRSLLTQCAQAVASFDQRRATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGN 279
>TAIR|locus:2099624 [details] [associations]
symbol:RGL2 "RGA-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;TAS] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=RCA;TAS] [GO:0010187 "negative regulation of seed
germination" evidence=IMP] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IGI] [GO:0009723
"response to ethylene stimulus" evidence=IGI;RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP;IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:2000377 "regulation of reactive oxygen species metabolic
process" evidence=IGI] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009062 "fatty acid catabolic process"
evidence=RCA] [GO:0009686 "gibberellin biosynthetic process"
evidence=RCA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] Pfam:PF03514 GO:GO:0009737 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0030154 GO:GO:0006952
GO:GO:0009723 GO:GO:0003700 GO:GO:0006351 GO:GO:0010187
GO:GO:0009908 GO:GO:0042538 EMBL:AC009895 GO:GO:2000377
GO:GO:0040029 GO:GO:0009867 GO:GO:0009863 GO:GO:0009740
eggNOG:NOG243696 HOGENOM:HOG000238577 KO:K14494 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 EMBL:AK118009 IPI:IPI00521981 RefSeq:NP_186995.1
UniGene:At.18489 UniGene:At.67027 ProteinModelPortal:Q8GXW1
SMR:Q8GXW1 IntAct:Q8GXW1 STRING:Q8GXW1 EnsemblPlants:AT3G03450.1
GeneID:821251 KEGG:ath:AT3G03450 GeneFarm:4240 TAIR:At3g03450
InParanoid:Q8GXW1 OMA:MLSELNN PhylomeDB:Q8GXW1
ProtClustDB:CLSN2684085 Genevestigator:Q8GXW1 GermOnline:AT3G03450
Uniprot:Q8GXW1
Length = 547
Score = 504 (182.5 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 116/288 (40%), Positives = 165/288 (57%)
Query: 238 LRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDS 297
L+ N AI EA+ ++H+ID + QG QW L+ ALA RPGGPP R+TGI
Sbjct: 265 LKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPP 324
Query: 298 TAAYARGGGLEIVGQRLSKLADLYKVPFEFNA-AAISGSEVQLENLEVRP-GEALAVNFS 355
L+ +G +L++ A V FEF AA S S+++ E E RP E L VN
Sbjct: 325 QTE--NSDSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMFETRPESETLVVNSV 382
Query: 356 MMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAI 415
LH + S SI+ +LL VK + P +VT+VEQEAN N F RF E +++Y ++
Sbjct: 383 FELHRLLARSGSIE----KLLNTVKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSL 438
Query: 416 FDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPY 475
FDS++ + S+DR+ E + L R+I+N++A EG++RVERHE +WR R AGF P
Sbjct: 439 FDSLEDSYSLPSQDRVMSEVY-LGRQILNVVAAEGSDRVERHETAAQWRIRMKSAGFDPI 497
Query: 476 PL--SPFVNATIKTLLENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
L S F A++ L D Y +EE DG L +GW+ + +I +SAW+
Sbjct: 498 HLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWK 545
Score = 67 (28.6 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 44/187 (23%), Positives = 78/187 (41%)
Query: 44 SNERARLSVDTFEQYCTLESSSGTGSHGAPNSPSTASFSPEKTQVSWPNQQSYSSELYQS 103
S+E A ++ EQ + S+ GS +S ++P +W +S SEL +
Sbjct: 56 SSEMAEVA-QKLEQLEMVLSNDDVGSTVLNDS---VHYNPSDLS-NWV--ESMLSEL-NN 107
Query: 104 PDRTCGSPVSGSCITQNENDLRHKLRELETVMLGPDL-DTPAMYN-VTSPKEDQISSESE 161
P + + SC+ ++E DLR + L ++ D A + + S ES
Sbjct: 108 P-ASSDLDTTRSCVDRSEYDLR-AIPGLSAFPKEEEVFDEEASSKRIRLGSWCESSDEST 165
Query: 162 RWKCLVEIISRG-DLKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYML 220
R LV+ G L L ACA+AI ++ A++L+ + + ++ Y
Sbjct: 166 RSVVLVDSQETGVRLVHALVACAEAIHQENLNLADALVKRVGTLAGSQAGAMGKVATYFA 225
Query: 221 EGLIARL 227
+ L R+
Sbjct: 226 QALARRI 232
>TAIR|locus:2184625 [details] [associations]
symbol:SCL8 "AT5G52510" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Pfam:PF03514 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AP000378 EMBL:AF036305
EMBL:AY099686 EMBL:AY128868 IPI:IPI00531227 PIR:T51239
RefSeq:NP_200064.3 UniGene:At.22412 UniGene:At.71617 STRING:Q9FYR7
PRIDE:Q9FYR7 EnsemblPlants:AT5G52510.1 GeneID:835327
KEGG:ath:AT5G52510 GeneFarm:4234 TAIR:At5g52510 eggNOG:NOG240925
HOGENOM:HOG000239354 InParanoid:Q9FYR7 OMA:PGAPWRD PhylomeDB:Q9FYR7
ProtClustDB:CLSN2680518 Genevestigator:Q9FYR7 Uniprot:Q9FYR7
Length = 640
Score = 512 (185.3 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 111/273 (40%), Positives = 164/273 (60%)
Query: 260 HIIDFLIAQGSQWIILIMALASRPGGP------PHIRITGIDDST-AAYARGGG---LEI 309
H+IDF I +G Q++ L+ L++R G P ++IT + ++ GG L+
Sbjct: 369 HVIDFDIGEGGQYVNLLRTLSTRRNGKSQSQNSPVVKITAVANNVYGCLVDDGGEERLKA 428
Query: 310 VGQRLSKLADLYKVPFEFNAA-AISGSEVQLENLEVRPGEALAVNFSMMLHHMPDESVSI 368
VG LS+L D + FN ++ ++ E+L P E LAVN + L+ +PDESV
Sbjct: 429 VGDLLSQLGDRLGISVSFNVVTSLRLGDLNRESLGCDPDETLAVNLAFKLYRVPDESVCT 488
Query: 369 QNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVALPRDSK 428
+N RD LLR VKGL P+VVTLVEQE N+NTAPF R E+ YGA+ +S++ +P +
Sbjct: 489 ENPRDELLRRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNS 548
Query: 429 DRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATIKTL 488
DR VE+ + R++VN +ACEG +R+ER E FGKWR R MAGF PLS + ++K+
Sbjct: 549 DRAKVEEG-IGRKLVNAVACEGIDRIERCEVFGKWRMRMSMAGFELMPLSEKIAESMKSR 607
Query: 489 LENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
+ +T++E +G + GW +A+ V+SAWR
Sbjct: 608 GNRVHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
Score = 58 (25.5 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 39/174 (22%), Positives = 67/174 (38%)
Query: 66 GTGSHGAPNSPSTASFSPEKTQV-SWPNQQSYSSELYQS---PDRTCGSPVSGSCITQNE 121
G+G + P P + +V N + EL + D G S IT +
Sbjct: 164 GSGINNYPTLTGVPCIEPVQNRVHESENMLNSLRELEKQLLDDDDESGGDDDVSVITNSN 223
Query: 122 NDLRHKLRELETVMLGPDLDTPAMYNVTSPKEDQISSESERWKCLVEIISRGDLKELLCA 181
+D ++ L T P+ P + SP SS + SR + E+ A
Sbjct: 224 SDW---IQNLVTPNPNPN---PVLS--FSPSSSSSSSSPSTASTTTSVCSRQTVMEIATA 275
Query: 182 CAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLASSGSSIY 235
A E A E ++A Q ++ + ++L +M+ L +R+AS + +Y
Sbjct: 276 IA---EGKTEIATE-ILARVSQTPNLERNSEEKLVDFMVAALRSRIASPVTELY 325
Score = 38 (18.4 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 21 VQKLASKNWPPHQNIDHQPSSDDSNERARLSVDTFEQYCTLES 63
+Q L + N P+ + PSS S+ + T C+ ++
Sbjct: 227 IQNLVTPNPNPNPVLSFSPSSSSSSSSPS-TASTTTSVCSRQT 268
>TAIR|locus:2157477 [details] [associations]
symbol:RGL3 "RGA-like protein 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP;ISS] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;TAS] [GO:0009686 "gibberellin
biosynthetic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009723 "response to ethylene
stimulus" evidence=RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0048444 "floral
organ morphogenesis" evidence=RCA] Pfam:PF03514 GO:GO:0007275
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003700
GO:GO:0006351 GO:GO:0040029 EMBL:AL391150 GO:GO:0009740
HOGENOM:HOG000238577 KO:K14494 InterPro:IPR021914
InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
ProtClustDB:CLSN2684085 EMBL:AK117226 EMBL:BT005905 IPI:IPI00544591
PIR:T51475 RefSeq:NP_197251.1 UniGene:At.31541
ProteinModelPortal:Q9LF53 SMR:Q9LF53 PaxDb:Q9LF53 PRIDE:Q9LF53
EnsemblPlants:AT5G17490.1 GeneID:831615 KEGG:ath:AT5G17490
GeneFarm:4241 TAIR:At5g17490 eggNOG:NOG300920 InParanoid:Q9LF53
OMA:RRIYRIH PhylomeDB:Q9LF53 Genevestigator:Q9LF53
GermOnline:AT5G17490 Uniprot:Q9LF53
Length = 523
Score = 480 (174.0 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 109/288 (37%), Positives = 164/288 (56%)
Query: 238 LRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDS 297
L+ N AI EA+ +H+ID + QG QW L+ ALA RPGGPP R+TG+ +
Sbjct: 238 LKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNP 297
Query: 298 TAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAISG-SEVQLENLEVRP-GEALAVNFS 355
+ G++ +G +L++LA V F+FN S+++ + E R E L VN
Sbjct: 298 S----NREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFETRTESETLVVNSV 353
Query: 356 MMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAI 415
LH + + SI+ +LL VK + P +VT+VEQEAN N F RF E +++Y ++
Sbjct: 354 FELHPVLSQPGSIE----KLLATVKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSL 409
Query: 416 FDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPY 475
FDS++ + S+DR+ E + L R+I+NL+A EG++R+ERHE +WR R AGF P
Sbjct: 410 FDSLEDGVVIPSQDRVMSEVY-LGRQILNLVATEGSDRIERHETLAQWRKRMGSAGFDPV 468
Query: 476 PLSP--FVNATIKTLLENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
L F A++ L D Y +EE DG+L L W+ + +I +SAW+
Sbjct: 469 NLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWK 516
Score = 72 (30.4 bits), Expect = 1.6e-51, Sum P(2) = 1.6e-51
Identities = 20/75 (26%), Positives = 38/75 (50%)
Query: 154 DQISSESERWKCLVEIISRG-DLKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPI 212
D ++SES R L+E G L + L ACA+A++ ++ A++L+ + + +
Sbjct: 137 DSVTSESTRSVVLIE--ETGVRLVQALVACAEAVQLENLSLADALVKRVGLLAASQAGAM 194
Query: 213 QRLGAYMLEGLIARL 227
++ Y E L R+
Sbjct: 195 GKVATYFAEALARRI 209
>TAIR|locus:2006747 [details] [associations]
symbol:GAI "GIBBERELLIC ACID INSENSITIVE" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA;TAS] [GO:0009938 "negative regulation of gibberellic
acid mediated signaling pathway" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010233 "phloem transport"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IGI]
[GO:0009723 "response to ethylene stimulus" evidence=IGI;RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IGI;RCA]
[GO:0042538 "hyperosmotic salinity response" evidence=IGI;RCA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
[GO:2000033 "regulation of seed dormancy process" evidence=IGI]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
[GO:0010187 "negative regulation of seed germination" evidence=IGI]
[GO:0010218 "response to far red light" evidence=IEP] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IGI] [GO:0009863 "salicylic acid mediated signaling
pathway" evidence=IGI;RCA] [GO:0009867 "jasmonic acid mediated
signaling pathway" evidence=IGI;RCA] [GO:0009845 "seed germination"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0010325 "raffinose family oligosaccharide biosynthetic process"
evidence=RCA] [GO:0048444 "floral organ morphogenesis"
evidence=RCA] [GO:0006808 "regulation of nitrogen utilization"
evidence=IMP] Pfam:PF03514 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0005634 GO:GO:0009723
GO:GO:0003700 GO:GO:0006351 GO:GO:0010218 GO:GO:0010187
GO:GO:0006808 GO:GO:0042538 GO:GO:2000377 EMBL:AC006917
GO:GO:0010233 GO:GO:0040029 GO:GO:0009867 GO:GO:0009863
GO:GO:0009740 EMBL:Y11337 EMBL:Y15193 EMBL:AY058194 EMBL:AY142002
IPI:IPI00535232 PIR:H86282 RefSeq:NP_172945.1 UniGene:At.15032
UniGene:At.75604 PDB:2ZSH PDB:2ZSI PDBsum:2ZSH PDBsum:2ZSI
ProteinModelPortal:Q9LQT8 SMR:Q9LQT8 DIP:DIP-32985N IntAct:Q9LQT8
STRING:Q9LQT8 EnsemblPlants:AT1G14920.1 GeneID:838057
KEGG:ath:AT1G14920 GeneFarm:4235 TAIR:At1g14920 eggNOG:NOG243696
HOGENOM:HOG000238577 InParanoid:Q9LQT8 KO:K14494 OMA:RRVYRFR
PhylomeDB:Q9LQT8 ProtClustDB:CLSN2682993 EvolutionaryTrace:Q9LQT8
Genevestigator:Q9LQT8 GermOnline:AT1G14920 GO:GO:0009938
GO:GO:2000033 InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041
PROSITE:PS50985 Uniprot:Q9LQT8
Length = 533
Score = 475 (172.3 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 108/289 (37%), Positives = 170/289 (58%)
Query: 238 LRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDS 297
L+ N AI EA + + ++H+IDF ++QG QW L+ ALA RPGGPP R+TGI
Sbjct: 250 LKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGI--G 307
Query: 298 TAAYARGGGLEIVGQRLSKLADLYKVPFEFNA-AAISGSEVQLENLEVRPGE--ALAVNF 354
A L VG +L+ LA+ V FE+ A + +++ LE+RP E ++AVN
Sbjct: 308 PPAPDNFDYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASMLELRPSEIESVAVNS 367
Query: 355 SMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGA 414
LH + +I D++L +V + P++ T+VEQE+N N+ F RF E++++Y
Sbjct: 368 VFELHKLLGRPGAI----DKVLGVVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYST 423
Query: 415 IFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTP 474
+FDS++ +P +D++ E + L ++I N++AC+G +RVERHE +WR+RF AGF
Sbjct: 424 LFDSLE-GVP-SGQDKVMSEVY-LGKQICNVVACDGPDRVERHETLSQWRNRFGSAGFAA 480
Query: 475 YPL--SPFVNATIKTLLENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
+ + F A++ L N + Y +EE DG L LGW + +I +SAW+
Sbjct: 481 AHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAWK 529
Score = 72 (30.4 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 157 SSESERWKCLVEIISRG-DLKELLCACAKAIENNDMYAAESLMAESRQM-VSVSGDPIQR 214
++ES R LV+ G L L ACA+A++ ++ AE+L+ + + VS G +++
Sbjct: 150 TAESTRHVVLVDSQENGVRLVHALLACAEAVQKENLTVAEALVKQIGFLAVSQIG-AMRK 208
Query: 215 LGAYMLEGL---IARLASSGSSIYKAL 238
+ Y E L I RL+ S S I +L
Sbjct: 209 VATYFAEALARRIYRLSPSQSPIDHSL 235
>TAIR|locus:2075155 [details] [associations]
symbol:AT3G46600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016671 "oxidoreductase
activity, acting on a sulfur group of donors, disulfide as
acceptor" evidence=IEA] [GO:0019538 "protein metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003700 GO:GO:0006351 GO:GO:0010200 EMBL:AL133314
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
ProtClustDB:CLSN2685117 EMBL:AK226419 EMBL:AY087418 IPI:IPI00537144
PIR:T45597 RefSeq:NP_190244.1 UniGene:At.595 STRING:Q9SNB8
EnsemblPlants:AT3G46600.1 GeneID:823813 KEGG:ath:AT3G46600
GeneFarm:4254 TAIR:At3g46600 eggNOG:NOG304481 InParanoid:Q9SNB8
OMA:FNESESQ PhylomeDB:Q9SNB8 Genevestigator:Q9SNB8 Uniprot:Q9SNB8
Length = 583
Score = 451 (163.8 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 95/285 (33%), Positives = 153/285 (53%)
Query: 238 LRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDS 297
+ C TA N I E +HIIDF I G QW LI AL+ R GPP +R+TGI+
Sbjct: 296 IMCYFTA-NRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELP 354
Query: 298 TAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMM 357
+ + +E G+RL + D + VPFE++ A + + L++L + GE VN +
Sbjct: 355 QSGFRPSERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILR 414
Query: 358 LHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFD 417
L + PDE+VS+ + RD L+L + ++P + E N+ F RF E + H ++FD
Sbjct: 415 LQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFD 474
Query: 418 SIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPL 477
+ L D R VE+ + R+ +++IACEG+ER R E + +W+ R + AGF P L
Sbjct: 475 MYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKL 534
Query: 478 SPFVNATIKTLL-ENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
S + K ++ E Y+ ++ ++ + +F GWK + + S W+
Sbjct: 535 SKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAVSCWK 579
Score = 93 (37.8 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 149 TSPKEDQISSESERWKCLVEIISRGDLKELLCACAKAIENNDMYAAESLMAESRQMVSVS 208
T K + S R+K + D++ LL CA+A+ + D A + E R+ S
Sbjct: 184 TEKKTRHVKGSSNRYK-QQKSDQPVDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRH 242
Query: 209 GDPIQRLGAYMLEGLIARLASS 230
GD QRLG + E L AR+ +
Sbjct: 243 GDATQRLGYHFAEALEARITGT 264
>TAIR|locus:2005516 [details] [associations]
symbol:RGA1 "REPRESSOR OF GA1-3 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009723 "response to ethylene
stimulus" evidence=IGI;RCA] [GO:0009737 "response to abscisic acid
stimulus" evidence=IGI;RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=IGI;RCA] [GO:0010029 "regulation of seed
germination" evidence=IGI] [GO:2000033 "regulation of seed dormancy
process" evidence=IGI] [GO:0010187 "negative regulation of seed
germination" evidence=IGI] [GO:0010218 "response to far red light"
evidence=IEP] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IGI] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=IGI;RCA] [GO:0042176
"regulation of protein catabolic process" evidence=IMP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009863 "salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010325 "raffinose family
oligosaccharide biosynthetic process" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=RCA] [GO:0046686
"response to cadmium ion" evidence=RCA] [GO:0048444 "floral organ
morphogenesis" evidence=RCA] [GO:0009938 "negative regulation of
gibberellic acid mediated signaling pathway" evidence=IGI]
Pfam:PF03514 GO:GO:0007275 GO:GO:0009737 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009723 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010187 GO:GO:0042176
GO:GO:0042538 EMBL:AC005560 GO:GO:2000377 GO:GO:0040029
GO:GO:0009867 GO:GO:0009740 eggNOG:NOG243696 HOGENOM:HOG000238577
KO:K14494 ProtClustDB:CLSN2682993 GO:GO:0009938 GO:GO:2000033
InterPro:IPR021914 InterPro:IPR005202 Pfam:PF12041 PROSITE:PS50985
EMBL:Y11336 EMBL:Y15194 EMBL:AY052239 EMBL:AY054160 EMBL:BT010467
IPI:IPI00523272 PIR:D84426 RefSeq:NP_178266.1 UniGene:At.24012
ProteinModelPortal:Q9SLH3 SMR:Q9SLH3 IntAct:Q9SLH3 STRING:Q9SLH3
PRIDE:Q9SLH3 EnsemblPlants:AT2G01570.1 GeneID:814686
KEGG:ath:AT2G01570 GeneFarm:4238 TAIR:At2g01570 InParanoid:Q9SLH3
OMA:VHALMAC PhylomeDB:Q9SLH3 Genevestigator:Q9SLH3
GermOnline:AT2G01570 Uniprot:Q9SLH3
Length = 587
Score = 467 (169.5 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 109/289 (37%), Positives = 167/289 (57%)
Query: 238 LRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDS 297
L+ N AI EA + + ++H+IDF + QG QW L+ ALA R GGPP R+TGI
Sbjct: 302 LKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGI--G 359
Query: 298 TAAYARGGGLEIVGQRLSKLADLYKVPFEFNA-AAISGSEVQLENLEVRPG--EALAVNF 354
A L VG +L++LA+ V FE+ A S +++ LE+RP EA+AVN
Sbjct: 360 PPAPDNSDHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASMLELRPSDTEAVAVNS 419
Query: 355 SMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGA 414
LH + I+ ++L +VK + P + T+VEQE+N N F RF E++++Y
Sbjct: 420 VFELHKLLGRPGGIE----KVLGVVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYST 475
Query: 415 IFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTP 474
+FDS++ +P +S+D++ E + L ++I NL+ACEG +RVERHE +W +RF +G P
Sbjct: 476 LFDSLE-GVP-NSQDKVMSEVY-LGKQICNLVACEGPDRVERHETLSQWGNRFGSSGLAP 532
Query: 475 YPL--SPFVNATIKTLLENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
L + F A++ + N Y +EE +G L LGW + +I +SAW+
Sbjct: 533 AHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWK 581
Score = 76 (31.8 bits), Expect = 1.4e-50, Sum P(2) = 1.4e-50
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 157 SSESERWKCLVEIISRG-DLKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRL 215
+ ES R LV+ G L L ACA+AI+ N++ AE+L+ + + ++++
Sbjct: 202 AGESTRSVILVDSQENGVRLVHALMACAEAIQQNNLTLAEALVKQIGCLAVSQAGAMRKV 261
Query: 216 GAYMLEGLIARL 227
Y E L R+
Sbjct: 262 ATYFAEALARRI 273
>TAIR|locus:2080345 [details] [associations]
symbol:SCR "SCARECROW" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009630
"gravitropism" evidence=IMP] [GO:0009956 "radial pattern formation"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0051457 "maintenance of protein location in
nucleus" evidence=IMP] [GO:0008356 "asymmetric cell division"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
GO:GO:0009630 GO:GO:0008356 GO:GO:0051457 EMBL:AL132957
GO:GO:0010103 GO:GO:0009956 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:U62798 EMBL:AY056315 EMBL:AY080840
EMBL:AY113991 IPI:IPI00524888 PIR:T47581 PIR:T51244
RefSeq:NP_190990.1 UniGene:At.71814 UniGene:At.932 IntAct:Q9M384
STRING:Q9M384 EnsemblPlants:AT3G54220.1 GeneID:824589
KEGG:ath:AT3G54220 GeneFarm:4242 TAIR:At3g54220 eggNOG:NOG311437
InParanoid:Q9M384 OMA:QERENSS PhylomeDB:Q9M384
ProtClustDB:CLSN2915643 Genevestigator:Q9M384 Uniprot:Q9M384
Length = 653
Score = 436 (158.5 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 111/277 (40%), Positives = 158/277 (57%)
Query: 246 NGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDSTAAYARGG 305
N AI EA + E+ +HIID I QG QW L LASRPGGPPH+R+TG+ S A
Sbjct: 388 NQAIQEAFEKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEA----- 442
Query: 306 GLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMPDES 365
L+ G+RLS AD +PFEF A + E L VR EA+AV++ + H + D +
Sbjct: 443 -LQATGKRLSDFADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHW--LQHSLYDVT 499
Query: 366 VSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVALPR 425
S H L L++ L+PKVVT+VEQ+ + + F RF+E +++Y A+FDS+ +
Sbjct: 500 GS-DAHT---LWLLQRLAPKVVTVVEQDLS-HAGSFLGRFVEAIHYYSALFDSLGASYGE 554
Query: 426 DSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATI 485
+S++R VEQ L++EI N++A G R F WR + GF L+ AT
Sbjct: 555 ESEERHVVEQQLLSKEIRNVLAVGGPSR-SGEVKFESWREKMQQCGFKGISLAGNA-ATQ 612
Query: 486 KTLLENY--NDNYTLEERDGALFLGWKNQAIIVSSAW 520
TLL +D YTL + +G L LGWK+ +++ +SAW
Sbjct: 613 ATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAW 649
Score = 106 (42.4 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 47/168 (27%), Positives = 71/168 (42%)
Query: 74 NSPSTASFSPEKTQVS---WPNQQSYSSELYQSPDRTCGSPVSGSCITQNENDLRHKLRE 130
+ PS +F P Q+S P QQ + Q + P+ + EN +
Sbjct: 197 SDPSPQTFEP-LYQISNNPSPPQQQQQHQQQQQQHKPPPPPIQQQ---ERENSSTDAPPQ 252
Query: 131 LETVMLGPDLDTPAMYNVTSPKEDQISSESERWKCLVEIISRGDLKELLCACAKAIENND 190
ETV PA+ T+ + E +R K E + L LL CA+A+ ++
Sbjct: 253 PETVTA----TVPAVQTNTAEALRERKEEIKRQKQDEEGLH---LLTLLLQCAEAVSADN 305
Query: 191 MYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLASSGSSIYKAL 238
+ A L+ E Q+ + G QR+ AY E + ARL +S IY AL
Sbjct: 306 LEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAAL 353
Score = 39 (18.8 bits), Expect = 6.6e-43, Sum P(2) = 6.6e-43
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 10 SDGTQKFYDQPVQKLASKNWPPHQNIDHQ 38
SD + + ++ P+ ++++ PP Q HQ
Sbjct: 197 SDPSPQTFE-PLYQISNNPSPPQQQQQHQ 224
>TAIR|locus:2025032 [details] [associations]
symbol:AT1G07520 "AT1G07520" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006355 GO:GO:0006351 GO:GO:0010200 EMBL:AC022464
InterPro:IPR005202 PROSITE:PS50985 PIR:T51232 eggNOG:NOG319005
EMBL:AB493440 EMBL:BX839686 IPI:IPI00525480 IPI:IPI01019456
RefSeq:NP_172232.1 UniGene:At.63938 UniGene:At.71785 STRING:Q3EDH0
PRIDE:Q3EDH0 GeneID:837266 KEGG:ath:AT1G07520 GeneFarm:4253
TAIR:At1g07520 InParanoid:Q3EDH0 OMA:VRIENEV Genevestigator:Q3EDH0
Uniprot:Q3EDH0
Length = 695
Score = 409 (149.0 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 96/282 (34%), Positives = 153/282 (54%)
Query: 245 TNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDSTAAYARG 304
+N I +A KD + +HI+DF I G QW + I L+ G +RITGI+
Sbjct: 413 SNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHGLRPT 472
Query: 305 GGLEIVGQRLSKLADLYKVPFEFNAAAISGSE-VQLENLEVRPGEALAVNFSMMLHHMPD 363
++ G+RL++ + VPFE+NA A E +++E ++RP E LAVN + ++ D
Sbjct: 473 ERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAVNAVLRFKNLRD 532
Query: 364 ESVSIQN-HRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFH-RFLETMNHYGAIFDSIDV 421
++ RD L+L++ ++P V + N APFF RF E + HY A+FD
Sbjct: 533 VIPGEEDCPRDGFLKLIRDMNPNVFLSSTVNGSFN-APFFTTRFKEALFHYSALFDLFGA 591
Query: 422 ALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFV 481
L +++ +RI+ E RE++N+IACEG +RVER E + +W+ R I AGF P+ +
Sbjct: 592 TLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPETYKQWQVRMIRAGFKQKPVEAEL 651
Query: 482 NATIKTLLEN--YNDNYTLEERDGALFL-GWKNQAIIVSSAW 520
+ ++ Y+ ++ L+E D FL GWK + + SS W
Sbjct: 652 VQLFREKMKKWGYHKDFVLDE-DSNWFLQGWKGRILFSSSCW 692
Score = 92 (37.4 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 174 DLKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARL-ASSGS 232
D + LL CA+++ D A+ L+ + R+ S GD QRL + L ARL S+G+
Sbjct: 314 DFRTLLTLCAQSVSAGDKITADDLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGT 373
Query: 233 SI 234
I
Sbjct: 374 MI 375
Score = 41 (19.5 bits), Expect = 1.9e-47, Sum P(3) = 1.9e-47
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 138 PDLDTPAMYNVTSPKEDQISSESERWKCLVEIISRGDLKE 177
P + P + SP D+I SE+ K + +++ L E
Sbjct: 45 PSIWVPDQDHHFSPPADEIDSENTLLKYVNQLLMEESLAE 84
>TAIR|locus:2174974 [details] [associations]
symbol:AT5G66770 "AT5G66770" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB010700
InterPro:IPR005202 PROSITE:PS50985 EMBL:AY062538 EMBL:BT002580
IPI:IPI00537848 RefSeq:NP_201478.1 UniGene:At.27307
ProteinModelPortal:Q9FL03 IntAct:Q9FL03 PRIDE:Q9FL03
EnsemblPlants:AT5G66770.1 GeneID:836810 KEGG:ath:AT5G66770
GeneFarm:4249 TAIR:At5g66770 eggNOG:NOG324692 HOGENOM:HOG000240374
InParanoid:Q9FL03 OMA:DASCSAP PhylomeDB:Q9FL03
ProtClustDB:CLSN2684429 Genevestigator:Q9FL03 Uniprot:Q9FL03
Length = 584
Score = 407 (148.3 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 106/282 (37%), Positives = 148/282 (52%)
Query: 246 NGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPP-HIRITGIDDSTAAYARG 304
N AI EA + NKIHI+DF I QG QW L+ ALA+R G P IR++GI + +
Sbjct: 307 NQAILEATEKSNKIHIVDFGIVQGIQWPALLQALATRTSGKPTQIRVSGIPAPSLGESPE 366
Query: 305 GGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMPDE 364
L G RL A + + F+F + + V P E LAVNF + L+ + DE
Sbjct: 367 PSLIATGNRLRDFAKVLDLNFDFIPILTPIHLLNGSSFRVDPDEVLAVNFMLQLYKLLDE 426
Query: 365 SVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVALP 424
+ +I D LRL K L+P+VVTL E E + N F +R + Y A+F+S++ L
Sbjct: 427 TPTIV---DTALRLAKSLNPRVVTLGEYEVSLNRVGFANRVKNALQFYSAVFESLEPNLG 483
Query: 425 RDSKDRINVEQHCLAREIVNLIACE--GAERVERHEPFGKWRSRFIMAGFTPYPLSPFVN 482
RDS++R+ VE+ R I LI E G R ER E +WR AGF LS +
Sbjct: 484 RDSEERVRVERELFGRRISGLIGPEKTGIHR-ERMEEKEQWRVLMENAGFESVKLSNYAV 542
Query: 483 ATIKTLLENYN-DN-YTL-EERDGALFLGWKNQAIIVSSAWR 521
+ K LL NYN N Y++ E + G + L W + ++ S+WR
Sbjct: 543 SQAKILLWNYNYSNLYSIVESKPGFISLAWNDLPLLTLSSWR 584
Score = 79 (32.9 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 140 LDTPAMYNVTSPKEDQISSESERWKCLVEIISRGDLKELLCACAKAIENNDMYAAESLMA 199
L P + + + KED +++SE +E L + + CA+ I ++D A +
Sbjct: 186 LSIPPLTHESPTKEDPETNDSEDDDFDLE----PPLLKAIYDCAR-ISDSDPNEASKTLL 240
Query: 200 ESRQMVSVSGDPIQRLGAYMLEGLIARLA 228
+ R+ VS GDP +R+ Y E L RL+
Sbjct: 241 QIRESVSELGDPTERVAFYFTEALSNRLS 269
Score = 38 (18.4 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 72 APNSPSTASFS 82
+PNSP+T+S S
Sbjct: 269 SPNSPATSSSS 279
>TAIR|locus:2120106 [details] [associations]
symbol:SHR "AT4G37650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;TAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008356 "asymmetric cell division"
evidence=IMP] [GO:0009956 "radial pattern formation" evidence=IMP]
[GO:0032350 "regulation of hormone metabolic process" evidence=NAS]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0055072 "iron ion
homeostasis" evidence=IMP] [GO:0045930 "negative regulation of
mitotic cell cycle" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] Pfam:PF03514 GO:GO:0005634 GO:GO:0005737
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0007049 EMBL:AL035605 EMBL:AL161591
GO:GO:0048366 GO:GO:0008356 GO:GO:0055072 GO:GO:0009956
GO:GO:0032350 InterPro:IPR005202 PROSITE:PS50985 EMBL:AF233752
EMBL:BT033026 EMBL:AY074547 IPI:IPI00525426 PIR:T04722
RefSeq:NP_195480.1 UniGene:At.2816 UniGene:At.71893 IntAct:Q9SZF7
STRING:Q9SZF7 PaxDb:Q9SZF7 PRIDE:Q9SZF7 EnsemblPlants:AT4G37650.1
GeneID:829919 KEGG:ath:AT4G37650 GeneFarm:4260 TAIR:At4g37650
eggNOG:NOG301144 HOGENOM:HOG000078767 InParanoid:Q9SZF7 OMA:EIGNRME
PhylomeDB:Q9SZF7 ProtClustDB:CLSN2685807 Genevestigator:Q9SZF7
Uniprot:Q9SZF7
Length = 531
Score = 372 (136.0 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 100/297 (33%), Positives = 157/297 (52%)
Query: 244 ATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGI-------DD 296
A NGAI EA+ E KIHI+D +QW L+ ALA+R PH+R+T + +D
Sbjct: 241 AANGAILEAVDGEAKIHIVDISSTFCTQWPTLLEALATRSDDTPHLRLTTVVVANKFVND 300
Query: 297 STAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAISG--SEVQLENLEVRPGEALAVNF 354
TA++ ++ +G R+ K A L VPF+FN G SE L L+V+P E LA+N
Sbjct: 301 QTASHRM---MKEIGNRMEKFARLMGVPFKFNIIHHVGDLSEFDLNELDVKPDEVLAINC 357
Query: 355 SMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANT---NTAPFFHRFL----E 407
+H + + RD ++ + L P++VT+VE+EA+ F FL E
Sbjct: 358 VGAMHGIASRG----SPRDAVISSFRRLRPRIVTVVEEEADLVGEEEGGFDDEFLRGFGE 413
Query: 408 TMNHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRF 467
+ + F+S + + PR S +R+ +E+ R IV+L+ACE ++ ER E KW R
Sbjct: 414 CLRWFRVCFESWEESFPRTSNERLMLER-AAGRAIVDLVACEPSDSTERRETARKWSRRM 472
Query: 468 IMAGFTPYPLSPFVNATIKTLLENYNDN-YTLEE-RDGA-LFLGWKNQAIIVSSAWR 521
+GF S V ++ LL Y + +++ + D A +FL W++Q ++ +SAWR
Sbjct: 473 RNSGFGAVGYSDEVADDVRALLRRYKEGVWSMVQCPDAAGIFLCWRDQPVVWASAWR 529
Score = 83 (34.3 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 17/61 (27%), Positives = 31/61 (50%)
Query: 178 LLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLASSGSSIYKA 237
+L A+A + D A+ ++ ++ S GD Q+L +Y L+ L R+ SG Y+
Sbjct: 146 VLLEAARAFSDKDTARAQQILWTLNELSSPYGDTEQKLASYFLQALFNRMTGSGERCYRT 205
Query: 238 L 238
+
Sbjct: 206 M 206
Score = 42 (19.8 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 61 LESSSGTGSHGAPNSPSTASFSPEKTQVSWPNQQSYSSELYQSPDRTCGSPVSGS 115
L SSS +H N+P+T +SP T + S S+ + SP S S
Sbjct: 64 LSSSSSHHNHHNHNNPNTY-YSPFTTPTQYHPATS-STPSSTAAAAALASPYSSS 116
>TAIR|locus:2040701 [details] [associations]
symbol:AT2G37650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] EMBL:AC004684 Pfam:PF03514 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000238576
eggNOG:NOG319005 EMBL:AF036306 IPI:IPI00536640 PIR:T02531
PIR:T51240 RefSeq:NP_181301.1 UniGene:At.26205 UniGene:At.66411
PaxDb:O80933 PRIDE:O80933 EnsemblPlants:AT2G37650.1 GeneID:818342
KEGG:ath:AT2G37650 GeneFarm:4256 TAIR:At2g37650 InParanoid:O80933
OMA:WERVERP PhylomeDB:O80933 ProtClustDB:CLSN2912903
Genevestigator:O80933 Uniprot:O80933
Length = 718
Score = 426 (155.0 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 99/318 (31%), Positives = 171/318 (53%)
Query: 216 GAYMLEGLIARLASSGSSIYKA----LRC---KETA---TNGAIAEAMKDENKIHIIDFL 265
G+ + +G++++ S +++ KA L C ++ + TN I + + + ++H+IDF
Sbjct: 400 GSQIYKGIVSK-PRSAAAVLKAHQLFLACCPFRKLSYFITNKTIRDLVGNSQRVHVIDFG 458
Query: 266 IAQGSQWIILIMALASRPGGPPHIRITGIDDSTAAYARGGGLEIVGQRLSKLADLYKVPF 325
I G QW LI + G P +RITGI+ + +E GQRL+ A L+ VPF
Sbjct: 459 ILYGFQWPTLIHRFSMY--GSPKVRITGIEFPQPGFRPAQRVEETGQRLAAYAKLFGVPF 516
Query: 326 EFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPK 385
E+ A A +QLE+L++ E VN ++ DESV +++ RD +L L+ ++P
Sbjct: 517 EYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDESVKVESCRDTVLNLIGKINPD 576
Query: 386 VVTLVEQEANTNTAPFF-HRFLETMNHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVN 444
+ N APFF RF E + H+ +IFD ++ +PR+ ++R+ +E RE +N
Sbjct: 577 LFVFGIVNGAYN-APFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALN 635
Query: 445 LIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNAT-IKTLLENYNDNYTLEERDG 503
+IACEG ERVER E + +W R + +G P P + T + + Y+ ++ +++ +
Sbjct: 636 VIACEGWERVERPETYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNR 695
Query: 504 ALFLGWKNQAIIVSSAWR 521
L GWK + ++ S W+
Sbjct: 696 WLLQGWKGRTVMALSVWK 713
Score = 41 (19.5 bits), Expect = 2.4e-41, Sum P(2) = 2.4e-41
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 71 GAPNSPSTASFSP 83
G P+ PS+ SF+P
Sbjct: 21 GLPDQPSSHSFTP 33
>TAIR|locus:2020487 [details] [associations]
symbol:LAS "AT1G55580" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010223 "secondary shoot formation" evidence=IMP]
Pfam:PF03514 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 EMBL:AC002328 GO:GO:0010223
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
eggNOG:NOG323432 EMBL:AY196482 EMBL:BT026519 EMBL:EF598379
EMBL:EF598380 EMBL:EF598381 EMBL:EF598382 EMBL:EF598383
EMBL:EF598384 EMBL:EF598385 EMBL:EF598386 EMBL:EF598387
EMBL:EF598388 EMBL:EF598389 EMBL:EF598390 EMBL:EF598391
EMBL:EF598392 EMBL:EF598393 EMBL:EF598394 EMBL:EF598395
EMBL:EF598396 EMBL:EF598397 EMBL:EF598398 EMBL:EF598399
EMBL:EF598400 EMBL:EF598401 EMBL:EF598402 IPI:IPI00532485
RefSeq:NP_175954.1 UniGene:At.45199 STRING:Q9ZWC5
EnsemblPlants:AT1G55580.1 GeneID:842007 KEGG:ath:AT1G55580
GeneFarm:4247 TAIR:At1g55580 InParanoid:Q9ZWC5 OMA:EREANHG
PhylomeDB:Q9ZWC5 ProtClustDB:CLSN2682663 Genevestigator:Q9ZWC5
Uniprot:Q9ZWC5
Length = 445
Score = 406 (148.0 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 101/299 (33%), Positives = 158/299 (52%)
Query: 238 LRCKETATNGAIAEAMK--DENKIHIIDFLIAQGSQWIILIMALASR---PGGPP-HIRI 291
+R N AI +A + D +HI+D I+QG QW L+ ALA R P PP +RI
Sbjct: 156 IRFGHLTANQAILDATETNDNGALHILDLDISQGLQWPPLMQALAERSSNPSSPPPSLRI 215
Query: 292 TGIDDSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAI-----SGS--EVQLENLEV 344
TG GL G RL++ AD + F+F+ I +G +++L L
Sbjct: 216 TGCGRDVT------GLNRTGDRLTRFADSLGLQFQFHTLVIVEEDLAGLLLQIRLLALSA 269
Query: 345 RPGEALAVNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHR 404
GE +AVN LH + ++ + H L +K L+ ++VT+ E+EAN F +R
Sbjct: 270 VQGETIAVNCVHFLHKIFNDDGDMIGH---FLSAIKSLNSRIVTMAEREANHGDHSFLNR 326
Query: 405 FLETMNHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWR 464
F E ++HY AIFDS++ LP +S++R+ +EQ +EI++++A E ER +RH F W
Sbjct: 327 FSEAVDHYMAIFDSLEATLPPNSRERLTLEQRWFGKEILDVVAAEETERKQRHRRFEIWE 386
Query: 465 SRFIMAGFTPYPLSPFVNATIKTLLE-NY-NDNYTLEERDGALFLGWKNQAIIVSSAWR 521
GF P+ F + K LL +Y ++ Y L+ + +LFLGW+N+ + S+W+
Sbjct: 387 EMMKRFGFVNVPIGSFALSQAKLLLRLHYPSEGYNLQFLNNSLFLGWQNRPLFSVSSWK 445
Score = 48 (22.0 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 14/53 (26%), Positives = 25/53 (47%)
Query: 175 LKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARL 227
L+ LL A + ++ AA++L++ S GD +RL + L R+
Sbjct: 41 LRRLLFTAANFVSQSNFTAAQNLLSILSLNSSPHGDSTERLVHLFTKALSVRI 93
>TAIR|locus:2101694 [details] [associations]
symbol:AT3G50650 "AT3G50650" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132979
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000240374
ProtClustDB:CLSN2684429 EMBL:AK229252 EMBL:AF036304 IPI:IPI00542878
PIR:T46142 PIR:T51238 RefSeq:NP_190634.1 UniGene:At.42939
PaxDb:Q9SCR0 PRIDE:Q9SCR0 EnsemblPlants:AT3G50650.1 GeneID:824228
KEGG:ath:AT3G50650 GeneFarm:4248 TAIR:At3g50650 eggNOG:NOG329237
InParanoid:Q9SCR0 OMA:LIRIKES PhylomeDB:Q9SCR0
Genevestigator:Q9SCR0 Uniprot:Q9SCR0
Length = 542
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 121/347 (34%), Positives = 172/347 (49%)
Query: 202 RQMVSVSGDPIQRLGAYMLEGLIAR-----LASSGSSI------YKALR--CKET----- 243
++ VS SGDPIQR+G Y E L + +SS SS+ YK L C +
Sbjct: 199 KESVSESGDPIQRVGYYFAEALSHKETESPSSSSSSSLEDFILSYKTLNDACPYSKFAHL 258
Query: 244 ATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPP-HIRITGIDDSTAAYA 302
N AI EA N IHI+DF I QG QW L+ ALA+R G P IRI+GI + +
Sbjct: 259 TANQAILEATNQSNNIHIVDFGIFQGIQWSALLQALATRSSGKPTRIRISGIPAPSLGDS 318
Query: 303 RGGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMP 362
G L G RL A + + FEF + + V P E L VNF + L+ +
Sbjct: 319 PGPSLIATGNRLRDFAAILDLNFEFYPVLTPIQLLNGSSFRVDPDEVLVVNFMLELYKLL 378
Query: 363 DESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVA 422
DE+ + LRL + L+P++VTL E E + N F +R ++ Y A+F+S++
Sbjct: 379 DETATTVG---TALRLARSLNPRIVTLGEYEVSLNRVEFANRVKNSLRFYSAVFESLEPN 435
Query: 423 LPRDSKDRINVEQHCLAREIVNLIACEG-----AERVERHEPFGKWRSRFIMAGFTPYPL 477
L RDSK+R+ VE+ R I++L+ + R E +WR AGF P
Sbjct: 436 LDRDSKERLRVERVLFGRRIMDLVRSDDDNNKPGTRFGLMEEKEQWRVLMEKAGFEPVKP 495
Query: 478 SPFVNATIKTLLENYNDN--YTLEERD-GALFLGWKNQAIIVSSAWR 521
S + + K LL NYN + Y+L E + G + L W N ++ S+WR
Sbjct: 496 SNYAVSQAKLLLWNYNYSTLYSLVESEPGFISLAWNNVPLLTVSSWR 542
>TAIR|locus:2165685 [details] [associations]
symbol:AT5G41920 "AT5G41920" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB017067
HOGENOM:HOG000238577 InterPro:IPR005202 PROSITE:PS50985
EMBL:BT029760 IPI:IPI00535918 RefSeq:NP_199007.1 UniGene:At.67848
UniGene:At.72727 IntAct:Q9FHZ1 DNASU:834197
EnsemblPlants:AT5G41920.1 GeneID:834197 KEGG:ath:AT5G41920
GeneFarm:4246 TAIR:At5g41920 eggNOG:NOG72098 InParanoid:Q9FHZ1
OMA:PWKGYTL PhylomeDB:Q9FHZ1 ProtClustDB:CLSN2686419
Genevestigator:Q9FHZ1 Uniprot:Q9FHZ1
Length = 405
Score = 368 (134.6 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 97/294 (32%), Positives = 150/294 (51%)
Query: 232 SSIYKALRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRI 291
+S+ ++ N AI +A+ E+ +HIID + QG QW L LASRP IRI
Sbjct: 125 NSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPALFHILASRPRKLRSIRI 184
Query: 292 TGIDDSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAA-AISGSEVQLENLEVRPGEAL 350
TG S+ A G+RL+ A +PFEF+ I G+ + L R GEA+
Sbjct: 185 TGFGSSSDLLAS------TGRRLADFASSLNLPFEFHPIEGIIGNLIDPSQLATRQGEAV 238
Query: 351 AVNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTA-PFFHRFLETM 409
V++ M H + D + + L +++ L P ++T+VEQE + + F RF+E +
Sbjct: 239 VVHW--MQHRLYD----VTGNNLETLEILRRLKPNLITVVEQELSYDDGGSFLGRFVEAL 292
Query: 410 NHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIM 469
++Y A+FD++ L +S +R VEQ L EI N++A G R KW+
Sbjct: 293 HYYSALFDALGDGLGEESGERFTVEQIVLGTEIRNIVAHGGGRRKRM-----KWKEELSR 347
Query: 470 AGFTPYPL--SPFVNATIKTLLENYNDNYTLEERDGALFLGWKNQAIIVSSAWR 521
GF P L +P A + + +N YTL E +G L LGWK+ +++ +SAW+
Sbjct: 348 VGFRPVSLRGNPATQAGLLLGMLPWN-GYTLVEENGTLRLGWKDLSLLTASAWK 400
Score = 70 (29.7 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 175 LKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLASS 230
L LL CA+ + + + A +L++E ++ S G +R+ AY + L R+ SS
Sbjct: 40 LLSLLLQCAEYVATDHLREASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISS 95
>TAIR|locus:2008086 [details] [associations]
symbol:SCL3 "AT1G50420" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] Pfam:PF03514 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
GO:GO:0009739 EMBL:AC012561 HOGENOM:HOG000238577 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY056154 EMBL:AY091260 EMBL:AF036301
IPI:IPI00539428 PIR:E96540 PIR:T51235 RefSeq:NP_175459.1
UniGene:At.14826 IntAct:Q9LPR8 STRING:Q9LPR8
EnsemblPlants:AT1G50420.1 GeneID:841464 KEGG:ath:AT1G50420
GeneFarm:4258 TAIR:At1g50420 eggNOG:NOG310008 InParanoid:Q9LPR8
OMA:MVHVIDL PhylomeDB:Q9LPR8 ProtClustDB:CLSN2913643
Genevestigator:Q9LPR8 Uniprot:Q9LPR8
Length = 482
Score = 297 (109.6 bits), Expect = 8.3e-33, Sum P(2) = 8.3e-33
Identities = 59/150 (39%), Positives = 87/150 (58%)
Query: 373 DRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVALPRDSKDRIN 432
D L + GLSPKV+ + EQ+++ N + R LE++ Y A+FD ++ +PR S+DRI
Sbjct: 330 DSFLNAIWGLSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIK 389
Query: 433 VEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATIKTLLENY 492
VE+ EI N+I+CEG ER ERHE KW R +AGF PLS + + LL+
Sbjct: 390 VEKMLFGEEIKNIISCEGFERRERHEKLEKWSQRIDLAGFGNVPLSYYAMLQARRLLQGC 449
Query: 493 N-DNYTLEERDGALFLGWKNQAIIVSSAWR 521
D Y ++E G + W+++ + SAWR
Sbjct: 450 GFDGYRIKEESGCAVICWQDRPLYSVSAWR 479
Score = 214 (80.4 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 61/199 (30%), Positives = 96/199 (48%)
Query: 234 IYKALRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITG 293
++ L+ TN AI EAM+ E +H+ID ++ +QW+ L+ A SRP GPPH+RITG
Sbjct: 140 MFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITG 199
Query: 294 IDDSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVN 353
+ LE + RL + A+ +PF+FN + +E L V+ GEALAV+
Sbjct: 200 VHHQKEV------LEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVEQLRVKTGEALAVS 253
Query: 354 FSMMLHHM--PDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNH 411
+ LH D+ + +N R G+ + V ++ ++ + A + N
Sbjct: 254 SVLQLHTFLASDDDLMRKNCALRFQNNPSGVDLQRVLMM---SHGSAAEARENDMSNNNG 310
Query: 412 YGAIFDSIDVALPRDSKDR 430
Y DS +LP S R
Sbjct: 311 YSPSGDSAS-SLPLPSSGR 328
Score = 123 (48.4 bits), Expect = 8.3e-33, Sum P(2) = 8.3e-33
Identities = 39/159 (24%), Positives = 72/159 (45%)
Query: 145 MYNVTSPKEDQISSESERWKCLVEII--SRG-DLKELLCACAKAIENNDMYAAESLMAES 201
+++ S + + S + CL ++ RG L LL CA + + + A + + +
Sbjct: 21 VFSTMSLNRPTLLASSSPFHCLKDLKPEERGLYLIHLLLTCANHVASGSLQNANAALEQL 80
Query: 202 RQMVSVSGDPIQRLGAYMLEGLIARLASSGSSIYKALRCKETATNGAIAEAMKDENKIHI 261
+ S GD +QR+ AY E L R+ S +YKAL +T TN ++E + ++
Sbjct: 81 SHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNATQTRTNN-VSEEIH-VRRLFF 138
Query: 262 IDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDSTAA 300
F I + S +++ A+ G + + +D S A
Sbjct: 139 EMFPILKVS-YLLTNRAILEAMEGEKMVHVIDLDASEPA 176
>TAIR|locus:2015243 [details] [associations]
symbol:AT1G63100 "AT1G63100" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0000226 "microtubule cytoskeleton organization"
evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
evidence=RCA] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] Pfam:PF03514
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700
GO:GO:0006351 EMBL:AC010795 InterPro:IPR005202 PROSITE:PS50985
IPI:IPI00520577 PIR:D96656 RefSeq:NP_176498.1 UniGene:At.66082
ProteinModelPortal:Q9CAN3 SMR:Q9CAN3 PRIDE:Q9CAN3
EnsemblPlants:AT1G63100.1 GeneID:842613 KEGG:ath:AT1G63100
GeneFarm:4261 TAIR:At1g63100 eggNOG:NOG286854 HOGENOM:HOG000241666
InParanoid:Q9CAN3 OMA:RTKCENE PhylomeDB:Q9CAN3
ProtClustDB:CLSN2682380 Genevestigator:Q9CAN3 Uniprot:Q9CAN3
Length = 658
Score = 363 (132.8 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 99/289 (34%), Positives = 138/289 (47%)
Query: 246 NGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGIDDSTAAYARGG 305
N + A + + ++HIIDF I QG QW +LASR P H+RITGI +S
Sbjct: 373 NEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKLE----- 427
Query: 306 GLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMPDES 365
L G RL A+ + FEF+ +V+L L V+ GE++AVN M +H +
Sbjct: 428 -LNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVNCVMQMHKTLYDG 486
Query: 366 VSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVALPR 425
RD L L++ +P + L EQEA N+ R ++ +Y A+FD+I L
Sbjct: 487 TGAAI-RD-FLGLIRSTNPIALVLAEQEAEHNSEQLETRVCNSLKYYSAMFDAIHTNLAT 544
Query: 426 DSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATI 485
DS R+ VE+ REI N++ACEG+ R ERH F WR GF +S
Sbjct: 545 DSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRMLEQLGFRSLGVSEREVLQS 604
Query: 486 KTLLENY-NDN---YTLEERD----------GALFLGWKNQAIIVSSAW 520
K LL Y +DN + +E D G + L W Q + SAW
Sbjct: 605 KMLLRMYGSDNEGFFNVERSDEDNGGEGGRGGGVTLRWSEQPLYTISAW 653
Score = 48 (22.0 bits), Expect = 1.8e-32, Sum P(2) = 1.8e-32
Identities = 24/89 (26%), Positives = 41/89 (46%)
Query: 62 ESSSGTGSHGAPNSPSTASFSPEKTQVSWPNQQSYSSELYQSPDRTCGSPVSGSCITQNE 121
E+S G+ + + S S + PE T S N S+ + +RT G+ ++ + N
Sbjct: 214 EASGGSSTSASSESRSLSHRVPEPTNGS-RNPYSHRGA---TEERTTGN-INNN---NNR 265
Query: 122 NDLRHKLRELETVMLGPDLDTPAMYNVTS 150
NDL+ EL ++ G LD N+ +
Sbjct: 266 NDLQRDF-ELVNLLTGC-LDAIRSRNIAA 292
>TAIR|locus:2132482 [details] [associations]
symbol:AT4G08250 "AT4G08250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351
InterPro:IPR005202 PROSITE:PS50985 EMBL:AL080252 EMBL:AL161510
EMBL:BT011797 IPI:IPI00529829 PIR:T10552 RefSeq:NP_192565.1
UniGene:At.50325 DNASU:826375 EnsemblPlants:AT4G08250.1
GeneID:826375 KEGG:ath:AT4G08250 GeneFarm:4263 TAIR:At4g08250
eggNOG:NOG320032 HOGENOM:HOG000239937 InParanoid:Q9SUF5 OMA:SLEAGFP
PhylomeDB:Q9SUF5 ProtClustDB:CLSN2685964 Genevestigator:Q9SUF5
Uniprot:Q9SUF5
Length = 483
Score = 341 (125.1 bits), Expect = 1.9e-29, P = 1.9e-29
Identities = 94/283 (33%), Positives = 142/283 (50%)
Query: 243 TATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPP--HIRITGIDDSTAA 300
TAT AI EA+K E +IHI+D+ I +G QW L+ AL SR GP H+RIT + +T
Sbjct: 200 TATQ-AILEAVKYERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNG 258
Query: 301 YARGGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHH 360
++ G+RL+ AD PF + + + +L++ GEA+ +N MLH
Sbjct: 259 KKSVAAVQETGRRLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVIN--CMLH- 315
Query: 361 MPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANT-NTAPFFHRFLETMNHYGAIFDSI 419
+P S + L K L+PK+VTLV +E F +RF++ ++ + AIFDS+
Sbjct: 316 LPRFSHQTPSSVISFLSEAKTLNPKLVTLVHEEVGLMGNQGFLYRFMDLLHQFSAIFDSL 375
Query: 420 DVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSP 479
+ L + R VE+ + + N + A E E F W GF P +S
Sbjct: 376 EAGLSIANPARGFVERVFIGPWVANWLTRITANDAEV-ESFASWPQWLETNGFKPLEVS- 433
Query: 480 FVN-ATIKTLLENYNDNYTLEER-DGALFLGWKNQAIIVSSAW 520
F N K LL +ND + +EE L LGWK++ ++ +S W
Sbjct: 434 FTNRCQAKLLLSLFNDGFRVEELGQNGLVLGWKSRRLVSASFW 476
>TAIR|locus:2083073 [details] [associations]
symbol:AT3G49950 "AT3G49950" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AL132978
InterPro:IPR005202 PROSITE:PS50985 eggNOG:NOG309215 EMBL:BT012553
EMBL:AK226623 IPI:IPI00534186 PIR:T45848 RefSeq:NP_190564.1
UniGene:At.50260 EnsemblPlants:AT3G49950.1 GeneID:824157
KEGG:ath:AT3G49950 GeneFarm:4259 TAIR:At3g49950
HOGENOM:HOG000241523 InParanoid:Q9SN22 OMA:MSMDFRV PhylomeDB:Q9SN22
ProtClustDB:CLSN2684384 Genevestigator:Q9SN22 Uniprot:Q9SN22
Length = 410
Score = 276 (102.2 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 83/289 (28%), Positives = 141/289 (48%)
Query: 244 ATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALASRPGGPPHI-RITGIDDSTAAYA 302
A N AI A++ + +HI+D + Q LI A+ASR PP + ++T + S
Sbjct: 123 AANAAILTAVEGYSTVHIVDLSLTHCMQIPTLIDAMASRLNKPPPLLKLTVVSSSDHFPP 182
Query: 303 RGG-GLEIVGQRLSKLADLYKVPFEFNAAAIS---GSEVQLENLEVRPG---EALAVNFS 355
E +G +L A + EF + G L+ L + P EAL VN
Sbjct: 183 FINISYEELGSKLVNFATTRNITMEFTIVPSTYSDGFSSLLQQLRIYPSSFNEALVVNCH 242
Query: 356 MMLHHMPDESV--SIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYG 413
MML ++P+E + S + R L+ ++ L+P++VTL+E++ + + +R N++
Sbjct: 243 MMLRYIPEEPLTSSSSSLRTVFLKQLRSLNPRIVTLIEEDVDLTSENLVNRLKSAFNYFW 302
Query: 414 AIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFT 473
FD+ D + S+ R E ++ +I N++A EGAERVER E +W R A F
Sbjct: 303 IPFDTTDTFM---SEQRRWYEAE-ISWKIENVVAKEGAERVERTETKRRWIERMREAEFG 358
Query: 474 PYPLSPFVNATIKTLLENYNDNYTL--EERDGALFLGWKNQAIIVSSAW 520
+ A +K +LE + + + E+ D +L L WK +++ ++ W
Sbjct: 359 GVRVKEDAVADVKAMLEEHAVGWGMKKEDDDESLVLTWKGHSVVFATVW 407
Score = 76 (31.8 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 175 LKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLAS 229
+++LL CA AI++ND ++ + GD QRL + L L++R S
Sbjct: 27 MEQLLLHCATAIDSNDAALTHQILWVLNNIAPPDGDSTQRLTSAFLRALLSRAVS 81
>TAIR|locus:2087994 [details] [associations]
symbol:AT3G13840 "AT3G13840" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003700 GO:GO:0006351 EMBL:AB028610
InterPro:IPR005202 PROSITE:PS50985 IPI:IPI00544801
RefSeq:NP_188000.1 UniGene:At.64114 PaxDb:Q9LRW3 PRIDE:Q9LRW3
EnsemblPlants:AT3G13840.1 GeneID:820596 KEGG:ath:AT3G13840
GeneFarm:4262 TAIR:At3g13840 eggNOG:NOG262645 HOGENOM:HOG000240132
InParanoid:Q9LRW3 OMA:WFAFPNN PhylomeDB:Q9LRW3
ProtClustDB:CLSN2684819 Genevestigator:Q9LRW3 Uniprot:Q9LRW3
Length = 510
Score = 238 (88.8 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 78/279 (27%), Positives = 124/279 (44%)
Query: 249 IAEAMKDENKIHIIDFLIAQGSQWIILIMALASR-PGGPPHIRITGIDDSTA--AYARGG 305
+A+ KD+ +HIID ++ G QW L+ AL+ R G PP +RIT I D TA ++ G
Sbjct: 249 LAQDPKDKKDLHIIDIGVSHGMQWPTLLEALSCRLEGPPPRVRITVISDLTADIPFSVGP 308
Query: 306 GLEIVGQRLSKLADLYKVPFEFNAAAISGSEVQLENLEVRPGEALAVNFSMMLHHMPDES 365
G +L A K+ + + ++QL ++ P E L V LHH+
Sbjct: 309 PGYNYGSQLLGFARSLKINLQISVL----DKLQL--IDTSPHENLIVCAQFRLHHLKH-- 360
Query: 366 VSIQNHRDRLLRLVKGLSPKVVTLVEQEAN-TNTAPFFHRFLETMNHYGAIFDSIDVALP 424
SI + R L+ V+ L PK V L E +++A F F + + + DS
Sbjct: 361 -SINDERGETLKAVRSLRPKGVVLCENNGECSSSADFAAGFSKKLEYVWKFLDSTSSGFK 419
Query: 425 RDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNAT 484
++ + E+ + E ++ G + +E KW R AGF
Sbjct: 420 EENSE----ERKLMEGEATKVLMNAG----DMNEGKEKWYERMREAGFFVEAFEEDAVDG 471
Query: 485 IKTLLENYNDNYTLEERDGALFLG--WKNQAIIVSSAWR 521
K+LL Y++N+ + DG F G WK +A+ S W+
Sbjct: 472 AKSLLRKYDNNWEIRMEDGDTFAGLMWKGEAVSFCSLWK 510
Score = 67 (28.6 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 176 KELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLEGLIARLASSGSS 233
++LL CA AI ++ + + ++ S SGD +RL A+ L L L+SS S
Sbjct: 146 EKLLNPCALAITASNSSRVQHYLCVLSELASSSGDANRRLAAFGLRALQHHLSSSSVS 203
Score = 37 (18.1 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 24 LASKNWPPHQNIDH 37
L + PP+Q +DH
Sbjct: 2 LLEETEPPNQTLDH 15
>UNIPROTKB|Q84MM9 [details] [associations]
symbol:MOC1 "Protein MONOCULM 1" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IDA]
[GO:0010014 "meristem initiation" evidence=IMP] Pfam:PF03514
GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY242058 EMBL:AP003616 Gramene:Q84MM9
eggNOG:NOG323432 GO:GO:0010014 Uniprot:Q84MM9
Length = 441
Score = 245 (91.3 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 80/259 (30%), Positives = 118/259 (45%)
Query: 285 GPPHIRITGI--DDSTA--------AYARGGGLEIVGQRL----SKLADLYKVPFEFNAA 330
GPP +R+TG D T A+AR L L + A + AA
Sbjct: 187 GPPEVRVTGAGADRDTLLRTGNRLRAFARSIHLPFHFTPLLLSCATTAPHHVAGTSTGAA 246
Query: 331 AISGSEVQLENLEVRPGEALAVNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLV 390
A + + LE P E LAVN M LH++ + L+ VK +SP VVT+
Sbjct: 247 AAASTAAAATGLEFHPDETLAVNCVMFLHNLAGH-----DELAAFLKWVKAMSPAVVTIA 301
Query: 391 EQEANTNTAPFFH------RFLETMNHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVN 444
E+EA H R M+HY A+F++++ +P S++R+ VEQ L REI
Sbjct: 302 EREAGGGGGGGDHIDDLPRRVGVAMDHYSAVFEALEATVPPGSRERLAVEQEVLGREIEA 361
Query: 445 LIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATIKTLLE-NY-NDNYTLEERD 502
+ G E +W AGF PLS F + + LL +Y ++ Y ++E
Sbjct: 362 AVGPSGGRWWRGIE---RWGGAARAAGFAARPLSAFAVSQARLLLRLHYPSEGYLVQEAR 418
Query: 503 GALFLGWKNQAIIVSSAWR 521
GA FLGW+ + ++ SAW+
Sbjct: 419 GACFLGWQTRPLLSVSAWQ 437
Score = 174 (66.3 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 93/355 (26%), Positives = 141/355 (39%)
Query: 168 EIISRGDLK------ELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLE 221
+++ RGDL E++ A A A D AA+ L + +++ D G ++
Sbjct: 59 DLLQRGDLPAARRAAEIVLAAA-ASPRGD--AADRLAYHFARALALRVDAKAGHGHVVVG 115
Query: 222 GLIARLASSGS-----SIYKALRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILI 276
G AR ASSG+ I LR N AI EA+ ++HI+D G QW L+
Sbjct: 116 GGAARPASSGAYLAFNQIAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLL 175
Query: 277 MALASR--PG-GPPHIRITGIDDSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAIS 333
A+A R P GPP +R+TG R G RL A +PF F +S
Sbjct: 176 QAIAERADPALGPPEVRVTGAGADRDTLLR------TGNRLRAFARSIHLPFHFTPLLLS 229
Query: 334 GSEVQLENLE-VRPGEALAVNFSMM---LHHMPDESVSIQN----HR----DRL---LRL 378
+ ++ G A A + + L PDE++++ H D L L+
Sbjct: 230 CATTAPHHVAGTSTGAAAAASTAAAATGLEFHPDETLAVNCVMFLHNLAGHDELAAFLKW 289
Query: 379 VKGLSPKVVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVALP--RDSKDRINVEQH 436
VK +SP VVT+ E+EA H + G D + + E+
Sbjct: 290 VKAMSPAVVTIAEREAGGGGGGGDH-IDDLPRRVGVAMDHYSAVFEALEATVPPGSRERL 348
Query: 437 CLAREIVN--LIACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATIKTLL 489
+ +E++ + A G +W AGF PLS F + + LL
Sbjct: 349 AVEQEVLGREIEAAVGPSGGRWWRGIERWGGAARAAGFAARPLSAFAVSQARLLL 403
Score = 55 (24.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 19/59 (32%), Positives = 28/59 (47%)
Query: 176 KELLCACAKAIENNDMYAAESLMAESRQMVSVS--GDPIQRLGAYMLEGLIARL-ASSG 231
++LL ACA ++ D+ AA AE + S GD RL + L R+ A +G
Sbjct: 51 RDLLLACADLLQRGDLPAARRA-AEIVLAAAASPRGDAADRLAYHFARALALRVDAKAG 108
>UNIPROTKB|Q1AHE4 [details] [associations]
symbol:SCL "SCARECROW-like protein" species:4081 "Solanum
lycopersicum" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF03514 GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202
PROSITE:PS50985 EMBL:DQ087265 UniGene:Les.23827 Uniprot:Q1AHE4
Length = 71
Score = 231 (86.4 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 41/69 (59%), Positives = 54/69 (78%)
Query: 452 ERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATIKTLLENYNDNYTLEERDGALFLGWKN 511
ERVERHE GKW+ RF MAGF YPLS +VN+ IK+L+ Y+++YTL E+DGA+ LGWK
Sbjct: 2 ERVERHELLGKWKLRFTMAGFHQYPLSSYVNSVIKSLMRCYSEHYTLVEKDGAMLLGWKK 61
Query: 512 QAIIVSSAW 520
+ +I +SAW
Sbjct: 62 RNLISASAW 70
>TAIR|locus:2055622 [details] [associations]
symbol:HAM1 "AT2G45160" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] Pfam:PF03514
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0051301
GO:GO:0003700 GO:GO:0006351 GO:GO:0048768 GO:GO:0010492
InterPro:IPR005202 PROSITE:PS50985 HOGENOM:HOG000239326
ProtClustDB:CLSN2683334 EMBL:BT004053 EMBL:BT020591 IPI:IPI00534274
PIR:B84887 RefSeq:NP_182041.1 UniGene:At.27046 UniGene:At.67081
UniGene:At.74179 STRING:Q7XJM8 PaxDb:Q7XJM8 PRIDE:Q7XJM8
EnsemblPlants:AT2G45160.1 GeneID:819124 KEGG:ath:AT2G45160
GeneFarm:4226 TAIR:At2g45160 eggNOG:NOG320780 InParanoid:Q7XJM8
OMA:HRWIERS PhylomeDB:Q7XJM8 Genevestigator:Q7XJM8 Uniprot:Q7XJM8
Length = 640
Score = 245 (91.3 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 85/317 (26%), Positives = 148/317 (46%)
Query: 221 EGLIARLAS--SGSSIYKALRCKETATNGAIAEAMKDE--NKIHIIDFLIAQGSQWIILI 276
E LI R+A+ S S L+ N +I E+ + ++IHIIDF + G QW L+
Sbjct: 341 ENLILRIAAYRSFSETSPFLQFVNFTANQSILESCNESGFDRIHIIDFDVGYGGQWSSLM 400
Query: 277 MALASRPGG-----PPHIRITGIDDSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAA 331
LAS GG +++T + + L + L A K+PFE +
Sbjct: 401 QELASGVGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEIELLS 460
Query: 332 ISGSEVQLEN----LEVRPGE--ALAVNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPK 385
+ E+ L L +R E A+AVN +P SV+ + +LR +K LSP
Sbjct: 461 V---ELLLNPAYWPLSLRSSEKEAIAVN-------LPVNSVA-SGYLPLILRFLKQLSPN 509
Query: 386 VVTLVEQEANTNTAPFFHRFLETMNHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVNL 445
+V ++ + N APF + + ++ ++ ++ +S+D ++D ++E+ + I L
Sbjct: 510 IVVCSDRGCDRNDAPFPNAVIHSLQYHTSLLESLDA---NQNQDDSSIERFWVQPSIEKL 566
Query: 446 IACEGAERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATIKTLLE-NYNDNYTLEERDGA 504
+ + +ER P WR F GF+P LS A + LL+ N + +E+R +
Sbjct: 567 LM-KRHRWIERSPP---WRILFTQCGFSPASLSQMAEAQAECLLQRNPVRGFHVEKRQSS 622
Query: 505 LFLGWKNQAIIVSSAWR 521
L + W+ + ++ SAW+
Sbjct: 623 LVMCWQRKELVTVSAWK 639
Score = 38 (18.4 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 9/42 (21%), Positives = 22/42 (52%)
Query: 194 AESLMAESRQMVSVSGD---PIQRLGAYMLEGLIARLASSGS 232
A+ ++A ++ S + P QR +++ E L++ + + S
Sbjct: 293 AQGILARLNHHLNTSSNHKSPFQRAASHIAEALLSLIHNESS 334
>TAIR|locus:2101801 [details] [associations]
symbol:HAM2 "AT3G60630" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0010492 "maintenance of shoot apical meristem
identity" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0048768 "root hair cell tip growth" evidence=IMP]
[GO:0051301 "cell division" evidence=IMP] [GO:0007020 "microtubule
nucleation" evidence=RCA] Pfam:PF03514 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0051301 GO:GO:0003700 GO:GO:0006351
GO:GO:0048768 GO:GO:0010492 EMBL:AL162295 InterPro:IPR005202
PROSITE:PS50985 EMBL:AY064062 EMBL:AY096372 EMBL:EU550731
EMBL:EU550732 EMBL:EU550733 EMBL:EU550734 EMBL:EU550735
EMBL:EU550736 EMBL:EU550737 EMBL:EU550738 EMBL:EU550739
EMBL:EU550740 EMBL:EU550741 EMBL:EU550742 EMBL:EU550743
EMBL:EU550744 EMBL:EU550745 EMBL:EU550746 EMBL:EU550747
EMBL:EU550748 EMBL:EU550749 EMBL:EU550750 EMBL:EU550752
EMBL:EU550754 EMBL:EU550751 EMBL:EU550753 IPI:IPI00520916
PIR:T47874 RefSeq:NP_191622.1 UniGene:At.27084 IntAct:Q9M000
EnsemblPlants:AT3G60630.1 GeneID:825234 KEGG:ath:AT3G60630
GeneFarm:4227 TAIR:At3g60630 eggNOG:NOG261649 HOGENOM:HOG000239326
InParanoid:Q9M000 OMA:ANQTILE PhylomeDB:Q9M000
ProtClustDB:CLSN2683334 Genevestigator:Q9M000 Uniprot:Q9M000
Length = 623
Score = 233 (87.1 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 84/315 (26%), Positives = 141/315 (44%)
Query: 221 EGLIARLAS--SGSSIYKALRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMA 278
+ LI R+A+ + S L+ N I E+ + ++IHI+DF I G QW LI
Sbjct: 321 QNLIFRIAAYRAFSETSPFLQFVNFTANQTILESFEGFDRIHIVDFDIGYGGQWASLIQE 380
Query: 279 LA---SRPGGPPHIRITGIDDSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAA----A 331
LA +R P ++IT S + + L + L A V FE
Sbjct: 381 LAGKRNRSSSAPSLKITAFA-SPSTVSDEFELRFTEENLRSFAGETGVSFEIELLNMEIL 439
Query: 332 ISGSEVQLENLEVRPGEALAVNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVE 391
++ + L EA+AVN +P S+ + + +LR +K +SP VV +
Sbjct: 440 LNPTYWPLSLFRSSEKEAIAVN-------LPISSM-VSGYLPLILRFLKQISPNVVVCSD 491
Query: 392 QEANTNT-APFFHRFLETMNHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEG 450
+ + N APF + + + +Y ++ +S+D +++ ++E+ C+ I L+
Sbjct: 492 RSCDRNNDAPFPNGVINALQYYTSLLESLDSGNLNNAEAATSIERFCVQPSIQKLLT-NR 550
Query: 451 AERVERHEPFGKWRSRFIMAGFTPYPLSPFVNATIKTLLE-NYNDNYTLEERDGA---LF 506
+ER P WRS F GFTP LS + LL+ N + LE+R + L
Sbjct: 551 YRWMERSPP---WRSLFGQCGFTPVTLSQTAETQAEYLLQRNPMRGFHLEKRQSSSPSLV 607
Query: 507 LGWKNQAIIVSSAWR 521
L W+ + ++ SAW+
Sbjct: 608 LCWQRKELVTVSAWK 622
>UNIPROTKB|Q6DLS1 [details] [associations]
symbol:SCL1 "SCARECROW-like protein" species:3708 "Brassica
napus" [GO:0005515 "protein binding" evidence=IPI] Pfam:PF03514
GO:GO:0006355 GO:GO:0006351 InterPro:IPR005202 PROSITE:PS50985
EMBL:AY664405 IntAct:Q6DLS1 Uniprot:Q6DLS1
Length = 461
Score = 228 (85.3 bits), Expect = 4.9e-16, P = 4.9e-16
Identities = 103/414 (24%), Positives = 171/414 (41%)
Query: 138 PDLDTPAMYNVTSPKEDQISSESERWKCLVEIISRG-DLKELLCACAKAIENNDMYAAES 196
PD+D+ +Y P +QI+ + L + + G D E L IE+++++ A
Sbjct: 67 PDIDSSDVY----PGPNQITGYG--FNSLDSVDNGGFDYIEDLIRVVDCIESDELHLAHV 120
Query: 197 LMAESRQMVSVS-GDPIQRLGAYMLEGLIARLAS-------SGSSIYKALRC-KETA--- 244
++++ Q + S G P+QR Y E L + L S S I + +R KE +
Sbjct: 121 VLSQLNQRLQTSAGRPLQRAAFYFKEALGSLLTGTNRNQLFSWSDIVQKIRAIKEFSGIS 180
Query: 245 ---------TNGAIAEAMKDENK---IHIIDFLIAQGSQWIILIMALASRPGGPPHIRIT 292
N AI +++ ++ +H++DF I G Q+ L+ +A + +R+T
Sbjct: 181 PIPLFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREIAEKSANGGFLRVT 240
Query: 293 GIDDSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEV-QLENLEVRPGEALA 351
+ A +V + L++ A K+ F+ + E+ + + GE
Sbjct: 241 AVVAEDCAVET----RLVKENLTQFAAEMKIRFQIEFVLMKTFEILSFKAIRFVDGERTV 296
Query: 352 VNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTA---PFFHRFLET 408
V S + + I + L R+ SP VV V+ E T TA F F+
Sbjct: 297 VLISPAIFR---RVIGIAEFVNNLGRV----SPNVVVFVDSEGCTETAGSGSFRREFVSA 349
Query: 409 MNHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFI 468
Y + +S+D A P + VE L +I A E A R WR
Sbjct: 350 FEFYTMVLESLDAAAPPGDLVKKIVETFLLRPKIS--AAVETAAN-RRSAGQMTWREMLC 406
Query: 469 MAGFTPYPLSPFVNATIKTLLENYN-DNYTLEERDGALFLGWKNQAIIVSSAWR 521
AG P LS F + + LLE + + +R G L L W +A++ +SAWR
Sbjct: 407 AAGMRPVQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVATSAWR 460
>TAIR|locus:2126901 [details] [associations]
symbol:HAM3 "AT4G00150" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010492 "maintenance of shoot apical meristem identity"
evidence=IGI] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048768 "root hair cell tip growth" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0007623 "circadian rhythm"
evidence=IEP] Pfam:PF03514 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0051301 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0048768 GO:GO:0010492 EMBL:AL161471
EMBL:AF069299 InterPro:IPR005202 PROSITE:PS50985
HOGENOM:HOG000239326 eggNOG:NOG320780 EMBL:AF462831 EMBL:AY133537
EMBL:AF036303 EMBL:EU550755 EMBL:EU550756 EMBL:EU550757
EMBL:EU550758 EMBL:EU550759 EMBL:EU550760 EMBL:EU550761
EMBL:EU550762 EMBL:EU550763 EMBL:EU550764 EMBL:EU550765
EMBL:EU550766 EMBL:EU550767 EMBL:EU550768 EMBL:EU550769
EMBL:EU550770 EMBL:EU550771 EMBL:EU550772 EMBL:EU550773
EMBL:EU550774 EMBL:EU550775 EMBL:EU550776 EMBL:EU550777
IPI:IPI00542979 PIR:T01343 PIR:T51237 RefSeq:NP_191926.1
UniGene:At.3732 UniGene:At.67226 IntAct:O81316
EnsemblPlants:AT4G00150.1 GeneID:828208 KEGG:ath:AT4G00150
GeneFarm:4228 TAIR:At4g00150 InParanoid:O81316 OMA:KTPPWRA
PhylomeDB:O81316 ProtClustDB:CLSN2916162 Genevestigator:O81316
Uniprot:O81316
Length = 558
Score = 233 (87.1 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 109/427 (25%), Positives = 187/427 (43%)
Query: 110 SPVSGSCITQNENDLRHKLRELETVMLGPDLDTPAMYNVTSPKE----DQISSESERWK- 164
S VSG I Q++ H + + G TP +P +Q+ +E +
Sbjct: 162 SHVSGLLINQSQT---HYTQNPAAIFYGHHHHTPPPAKRLNPGPVGITEQLVKAAEVIES 218
Query: 165 --CLVE-IISRGDLKELLCACAKAIENNDMYAAESLMAESRQMVSVSGDPIQRLGAYMLE 221
CL + I++R + ++L K +E Y E+L + + +VS Q L Y L
Sbjct: 219 DTCLAQGILARLN-QQLSSPVGKPLERAAFYFKEAL---NNLLHNVS----QTLNPYSLI 270
Query: 222 GLIARLASSGSSIYKALRCKETATNGAIAEAMKDENKIHIIDFLIAQGSQWIILIMALAS 281
IA S S I L+ +N A+ E+ +++HIIDF I G QW L+ L
Sbjct: 271 FKIAAYKSF-SEISPVLQFANFTSNQALLESFHGFHRLHIIDFDIGYGGQWASLMQELVL 329
Query: 282 RPGGPP-HIRITGIDDSTAAYARGGGLEI--VGQRLSKLADLYKVPFEFNAAAIS--GSE 336
R P ++IT A+ A LE+ L A + + ++ GS
Sbjct: 330 RDNAAPLSLKITVF----ASPANHDQLELGFTQDNLKHFASEINISLDIQVLSLDLLGS- 384
Query: 337 VQLENLEVRPGEALAVNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANT 396
+ N + EA+AVN S + S +H +LR VK LSP ++ ++
Sbjct: 385 ISWPNSSEK--EAVAVNIS---------AASF-SHLPLVLRFVKHLSPTIIVCSDRGCER 432
Query: 397 NTAPFFHRFLETMNHYGAIFDSID-VALPRDSKDRINVEQHCLAREIVNLIACEGAERVE 455
PF + +++ + A+F+S+D V D+ +I E+ + EI L+ + + +E
Sbjct: 433 TDLPFSQQLAHSLHSHTALFESLDAVNANLDAMQKI--ERFLIQPEIEKLVL-DRSRPIE 489
Query: 456 RHEPFGKWRSRFIMAGFTPYPLSPFVNATIKTLLENYN-DNYTLEERDGALFLGWKNQAI 514
R P W++ F+ GF+P S F + + L++ + +E++ +L L W+ +
Sbjct: 490 R--PMMTWQAMFLQMGFSPVTHSNFTESQAECLVQRTPVRGFHVEKKHNSLLLCWQRTEL 547
Query: 515 IVSSAWR 521
+ SAWR
Sbjct: 548 VGVSAWR 554
Score = 40 (19.1 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 38 QPSSDD--SNERARLSVDTFEQYCTLESSSGTGSHGAPNSPSTASFS 82
QP S S+ +AR + E+ E +S S +P S ST S S
Sbjct: 25 QPPSSPLLSHRKARGGEEEEEEVPAAEPTSVLDSLISPTSSSTVSSS 71
>TAIR|locus:1009023400 [details] [associations]
symbol:AT5G67411 "AT5G67411" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF03514 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 EMBL:AB007645
InterPro:IPR005202 PROSITE:PS50985 EMBL:DQ487622 IPI:IPI00657013
RefSeq:NP_001032167.1 UniGene:At.65711 EnsemblPlants:AT5G67411.1
GeneID:3771574 KEGG:ath:AT5G67411 TAIR:At5g67411 eggNOG:NOG309215
PhylomeDB:Q2V2T9 Genevestigator:Q2V2T9 Uniprot:Q2V2T9
Length = 202
Score = 206 (77.6 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 59/183 (32%), Positives = 95/183 (51%)
Query: 286 PPHIRITGIDDSTAAYAR---GGGLEIVGQRLSKLADLYKVPFEFNAAAIS---GSEVQL 339
PP +++T I + G E +G +L A V EF + S G +
Sbjct: 19 PPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLI 78
Query: 340 ENLEVRP---GEALAVNFSMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANT 396
E L + P EAL VN MMLH++PDE ++ N R L+ ++ L+P +VTL++++++
Sbjct: 79 EQLRIDPFVFNEALVVNCHMMLHYIPDEILT-SNLRSVFLKELRDLNPTIVTLIDEDSDF 137
Query: 397 NTAPFFHRFLETMNHYGAIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVER 456
+ F R N+ +D+ ++ L R S+ R E ++ +I N++A EGAERVER
Sbjct: 138 TSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEAD-ISWKIDNVVAKEGAERVER 196
Query: 457 HEP 459
EP
Sbjct: 197 LEP 199
>TAIR|locus:2115340 [details] [associations]
symbol:HAM4 "AT4G36710" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0030154 "cell differentiation" evidence=IMP]
[GO:0048831 "regulation of shoot system development" evidence=IGI]
Pfam:PF03514 GO:GO:0005634 GO:GO:0030154 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003700 GO:GO:0006351 GO:GO:0048831
EMBL:AL161589 EMBL:Z99708 InterPro:IPR005202 PROSITE:PS50985
EMBL:AK118497 IPI:IPI00538111 PIR:E85433 RefSeq:NP_195389.4
UniGene:At.31304 PaxDb:O23210 PRIDE:O23210 DNASU:829824
EnsemblPlants:AT4G36710.1 GeneID:829824 KEGG:ath:AT4G36710
GeneFarm:4264 TAIR:At4g36710 eggNOG:NOG271584 HOGENOM:HOG000090733
InParanoid:O23210 OMA:ELVLCWH ProtClustDB:CLSN2717261
Genevestigator:O23210 Uniprot:O23210
Length = 486
Score = 204 (76.9 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 89/351 (25%), Positives = 145/351 (41%)
Query: 201 SRQMVSVSGDPIQRLGAYMLEGLIARLA---------SSGSSIYKALRC-KETA------ 244
++++ S +G P+QR Y E L + L SS S I + +R KE +
Sbjct: 149 NQRLRSPAGRPLQRAAFYFKEALGSFLTGSNRNPIRLSSWSEIVQRIRAIKEYSGISPIP 208
Query: 245 ------TNGAIAEAMKDENK---IHIIDFLIAQGSQWIILIMALASRPGGPPHIRITGID 295
N AI +++ ++ +H++DF I G Q+ L+ + + +R+T +
Sbjct: 209 LFSHFTANQAILDSLSSQSSSPFVHVVDFEIGFGGQYASLMREITEKSVSGGFLRVTAVV 268
Query: 296 DSTAAYARGGGLEIVGQRLSKLADLYKVPFEFNAAAISGSEV-QLENLEVRPGEALAVNF 354
A +V + L++ A K+ F+ + E+ + + GE V
Sbjct: 269 AEECAVET----RLVKENLTQFAAEMKIRFQIEFVLMKTFEMLSFKAIRFVEGERTVVLI 324
Query: 355 SMMLHHMPDESVSIQNHRDRLLRLVKGLSPKVVTLVEQEANTNTA---PFFHRFLETMNH 411
S + N+ LR V SPKVV V+ E T A F F+ +
Sbjct: 325 SPAIFRRLSGITDFVNN----LRRV---SPKVVVFVDSEGWTEIAGSGSFRREFVSALEF 377
Query: 412 YGAIFDSIDVALPRDSKDRINVEQHCLAREIVNLIACEGAERVERHEPFGKWRSRFIMAG 471
Y + +S+D A P + VE L +I + A+R RH WR F AG
Sbjct: 378 YTMVLESLDAAAPPGDLVKKIVEAFVLRPKISAAVET-AADR--RHTGEMTWREAFCAAG 434
Query: 472 FTPYPLSPFVNATIKTLLENYN-DNYTLEERDGALFLGWKNQAIIVSSAWR 521
P LS F + + LLE + + +R G L L W +A++ +SAWR
Sbjct: 435 MRPIQLSQFADFQAECLLEKAQVRGFHVAKRQGELVLCWHGRALVATSAWR 485
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.385 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 521 521 0.00090 119 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 625 (66 KB)
Total size of DFA: 313 KB (2161 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.89u 0.17s 49.06t Elapsed: 00:00:03
Total cpu time: 48.90u 0.17s 49.07t Elapsed: 00:00:03
Start: Mon May 20 14:58:32 2013 End: Mon May 20 14:58:35 2013