BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046070
(309 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225429878|ref|XP_002281010.1| PREDICTED: endonuclease V-like [Vitis vinifera]
Length = 285
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/283 (63%), Positives = 218/283 (77%), Gaps = 4/283 (1%)
Query: 22 MSSCYRSYMENYCEEEREALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTT 81
M++ S+ + E+R + + + W ++QD LK+RL+TED FTW LP T+
Sbjct: 1 MTATLCSFNLMFSMEKRASPEISSAESHQFIENWIQVQDSLKRRLVTEDDFTWKLPKPTS 60
Query: 82 TNTSTKEEEEV----LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQ 137
T T EE +LKY+GGVD+SFSK+DPS+ACG IVVLDL TL++VY+DYS++RLQ
Sbjct: 61 TATVRGRIEEGDDKHVLKYVGGVDVSFSKDDPSVACGTIVVLDLGTLEVVYDDYSVVRLQ 120
Query: 138 VPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANL 197
PYVPGFLA REAPVLL LL+ MK A+ FYPQ+LMVDGNGLLHPRGFGLA H+GVLAN+
Sbjct: 121 TPYVPGFLALREAPVLLKLLEKMKNSAHPFYPQLLMVDGNGLLHPRGFGLACHLGVLANI 180
Query: 198 TTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIF 257
TIG+GK LHHVDGLT SGVR+LL+AK N ED I L G SG T GVAMRST +LKPIF
Sbjct: 181 PTIGIGKTLHHVDGLTQSGVRELLEAKGNLTEDFIALTGYSGRTLGVAMRSTESSLKPIF 240
Query: 258 ISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
+S+GH +SLDTA++I+KMTC YRVPEP+RQADIRSR YLQKHQ
Sbjct: 241 VSIGHRVSLDTAIIIIKMTCNYRVPEPVRQADIRSRQYLQKHQ 283
>gi|296081816|emb|CBI20821.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 179/289 (61%), Positives = 218/289 (75%), Gaps = 10/289 (3%)
Query: 22 MSSCYRSYMENYCEEEREALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTT 81
M++ S+ + E+R + + + W ++QD LK+RL+TED FTW LP T+
Sbjct: 1 MTATLCSFNLMFSMEKRASPEISSAESHQFIENWIQVQDSLKRRLVTEDDFTWKLPKPTS 60
Query: 82 TNTSTKEEEEV----LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQ 137
T T EE +LKY+GGVD+SFSK+DPS+ACG IVVLDL TL++VY+DYS++RLQ
Sbjct: 61 TATVRGRIEEGDDKHVLKYVGGVDVSFSKDDPSVACGTIVVLDLGTLEVVYDDYSVVRLQ 120
Query: 138 VPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRG------FGLASHI 191
PYVPGFLA REAPVLL LL+ MK A+ FYPQ+LMVDGNGLLHPRG FGLA H+
Sbjct: 121 TPYVPGFLALREAPVLLKLLEKMKNSAHPFYPQLLMVDGNGLLHPRGKCTFTSFGLACHL 180
Query: 192 GVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPD 251
GVLAN+ TIG+GK LHHVDGLT SGVR+LL+AK N ED I L G SG T GVAMRST
Sbjct: 181 GVLANIPTIGIGKTLHHVDGLTQSGVRELLEAKGNLTEDFIALTGYSGRTLGVAMRSTES 240
Query: 252 TLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
+LKPIF+S+GH +SLDTA++I+KMTC YRVPEP+RQADIRSR YLQKHQ
Sbjct: 241 SLKPIFVSIGHRVSLDTAIIIIKMTCNYRVPEPVRQADIRSRQYLQKHQ 289
>gi|356552555|ref|XP_003544632.1| PREDICTED: endonuclease V [Glycine max]
Length = 268
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 173/267 (64%), Positives = 212/267 (79%), Gaps = 13/267 (4%)
Query: 37 EREALASPDPAAQAQLNQ-----WTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEE 91
E+++ P+ A+Q++ + W Q+ L+++LITED F W L +KEEE
Sbjct: 2 EKKSPEPPEEASQSRDSSRDNQTWITAQNILREKLITEDCFAWKL------QAGSKEEEA 55
Query: 92 VLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
L+Y+GGVD+SFSK+DPS ACG +VVLD TLQ++Y+D+SL+ LQVPYVPGFLAFREAP
Sbjct: 56 --LRYVGGVDISFSKDDPSRACGTLVVLDFHTLQVLYQDFSLVTLQVPYVPGFLAFREAP 113
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
VLL LL+ MK+ N FYPQ+LMVDGNG+LHPRGFGLA HIGV ANL TIG+GKNLHHVDG
Sbjct: 114 VLLQLLEKMKRSNNPFYPQLLMVDGNGILHPRGFGLACHIGVEANLPTIGIGKNLHHVDG 173
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
LTHS VR+LL A+EN +ED I L+G SG WGVAMRST ++KPIFIS+GH ISL TA+M
Sbjct: 174 LTHSRVRELLGAEENCSEDFINLVGCSGHIWGVAMRSTQGSIKPIFISIGHKISLQTAIM 233
Query: 272 IVKMTCKYRVPEPIRQADIRSRDYLQK 298
IV+MTCKYRVPEPIRQADIRSRDY++K
Sbjct: 234 IVQMTCKYRVPEPIRQADIRSRDYIRK 260
>gi|18417747|ref|NP_567868.1| deoxyribonuclease V [Arabidopsis thaliana]
gi|21593853|gb|AAM65820.1| unknown [Arabidopsis thaliana]
gi|51968464|dbj|BAD42924.1| unknown protein [Arabidopsis thaliana]
gi|51972029|dbj|BAD44679.1| unknown protein [Arabidopsis thaliana]
gi|119360075|gb|ABL66766.1| At4g31150 [Arabidopsis thaliana]
gi|332660465|gb|AEE85865.1| deoxyribonuclease V [Arabidopsis thaliana]
Length = 277
Score = 345 bits (885), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 166/251 (66%), Positives = 199/251 (79%), Gaps = 5/251 (1%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
QL +WTE QDELKK+LI D FTW L +ST + ++ +LKY+GGVDMSF KED S
Sbjct: 16 QLEKWTEEQDELKKKLIAYDDFTWKLSSSTELSQGSE-----ILKYVGGVDMSFCKEDSS 70
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
+AC C+VVL+L +L++V+ D+SLLRL VPYVPGFLAFREAPVLL +L M+ + FYPQ
Sbjct: 71 VACACLVVLELPSLRVVHHDFSLLRLHVPYVPGFLAFREAPVLLQILQKMRDEKHPFYPQ 130
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
VLMVDGNG+LHPRGFGLA H+GVLA+L TIGVGKNLHHVDGL S V+Q L + N +E
Sbjct: 131 VLMVDGNGILHPRGFGLACHLGVLAHLPTIGVGKNLHHVDGLNQSEVKQSLQLQINEHEQ 190
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
I L+G SG TWGV R T +LKPI++SVGH ISLD+AV +VK+TCKYRVPEPIRQADI
Sbjct: 191 TITLVGNSGITWGVGFRPTLSSLKPIYVSVGHRISLDSAVEVVKITCKYRVPEPIRQADI 250
Query: 291 RSRDYLQKHQS 301
RSR YLQKHQ+
Sbjct: 251 RSRAYLQKHQT 261
>gi|297798856|ref|XP_002867312.1| endonuclease V family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313148|gb|EFH43571.1| endonuclease V family protein [Arabidopsis lyrata subsp. lyrata]
Length = 277
Score = 343 bits (879), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 164/251 (65%), Positives = 199/251 (79%), Gaps = 5/251 (1%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
QL +W E QD+LKK+LI D FTW L +S + ++ +LKY+GGVDMSF KED S
Sbjct: 16 QLEKWIEEQDQLKKKLIAYDDFTWKLSSSMELSHGSE-----ILKYVGGVDMSFCKEDSS 70
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
+AC C+VVL+L +L++V+ D+SLLRL VPYVPGFLAFREAPVLL +L M+ + FYPQ
Sbjct: 71 VACACLVVLELPSLRVVHHDFSLLRLHVPYVPGFLAFREAPVLLQILQKMRDDKHPFYPQ 130
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
VLMVDGNG+LHPRGFGLA H+GVLA+L TIGVGKNLHHVDGL S VR+ L KEN +E
Sbjct: 131 VLMVDGNGILHPRGFGLACHLGVLAHLPTIGVGKNLHHVDGLNQSEVRRSLQLKENEHEQ 190
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
+I L+G SG TWGV +R T +LKPI++SVGH ISLD+AV IVKMTCKYRVPEPIRQ D+
Sbjct: 191 VITLVGNSGFTWGVGLRPTLSSLKPIYVSVGHRISLDSAVKIVKMTCKYRVPEPIRQVDM 250
Query: 291 RSRDYLQKHQS 301
RSR YLQ+HQ+
Sbjct: 251 RSRAYLQEHQT 261
>gi|357123328|ref|XP_003563363.1| PREDICTED: endonuclease V-like [Brachypodium distachyon]
Length = 270
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/257 (63%), Positives = 201/257 (78%), Gaps = 4/257 (1%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
+PA Q Q +WT QD LK RLI ED F W+LP + S + + LKY+GGVD+SF
Sbjct: 15 EPALQKQ--EWTRTQDVLKSRLILEDEFEWSLP--CANSNSDQSDARGKLKYVGGVDISF 70
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
KEDPS AC +VVLD TL+IV+E++ L+R+QVPY+PGFLAFREAP+LL +L+ MK A
Sbjct: 71 LKEDPSTACAAVVVLDANTLEIVHEEFDLVRMQVPYIPGFLAFREAPILLGVLEKMKTNA 130
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAK 224
+HFYPQ+LMVDGNGLLHPRGFGLA H+GVLA++ TIGVGKNLHHVDGL S +R+ L+AK
Sbjct: 131 HHFYPQLLMVDGNGLLHPRGFGLACHLGVLADMPTIGVGKNLHHVDGLNQSEIRRKLEAK 190
Query: 225 ENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEP 284
EN N++ IPL G SG TWG AMRS P + KPI+IS+GH ISLD+A+ IVK KYRVPEP
Sbjct: 191 ENCNKEFIPLTGQSGMTWGAAMRSCPGSSKPIYISIGHRISLDSAIGIVKYCSKYRVPEP 250
Query: 285 IRQADIRSRDYLQKHQS 301
RQADIRS+ +LQKH++
Sbjct: 251 TRQADIRSKVFLQKHEN 267
>gi|449442214|ref|XP_004138877.1| PREDICTED: endonuclease V-like [Cucumis sativus]
gi|449499610|ref|XP_004160863.1| PREDICTED: endonuclease V-like [Cucumis sativus]
Length = 304
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 168/268 (62%), Positives = 202/268 (75%), Gaps = 18/268 (6%)
Query: 35 EEEREA--LASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEV 92
EEE++ + + ++ W E QD LKK+LI ED N +
Sbjct: 3 EEEKQVKPYSEASTTSSVEIQNWIEAQDLLKKKLIKEDDLEGNGDD-------------- 48
Query: 93 LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
LKY+GGVD+SF KED S+ACG +VV+DLQTLQ+VY+D+SL +QVPYVPGFLAFREAPV
Sbjct: 49 -LKYVGGVDISFLKEDSSVACGTLVVMDLQTLQVVYDDFSLATVQVPYVPGFLAFREAPV 107
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
LL LL+ MKKRA YPQ+LMVDGNG+LHPRGFGLASH+GVLANL TIG+GKNLHHVDGL
Sbjct: 108 LLELLERMKKRAPLLYPQLLMVDGNGILHPRGFGLASHLGVLANLPTIGIGKNLHHVDGL 167
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
T S VRQLL + NN+ II L G SG WGVAMRST D+LKPI++S+GH +SLDTA+ I
Sbjct: 168 TQSSVRQLL-SDGKNNDSIITLKGISGCIWGVAMRSTVDSLKPIYVSIGHRVSLDTAIRI 226
Query: 273 VKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
VK+TC +RVPEPIRQADIRSR+YL+K Q
Sbjct: 227 VKITCTFRVPEPIRQADIRSREYLRKFQ 254
>gi|218198700|gb|EEC81127.1| hypothetical protein OsI_24016 [Oryza sativa Indica Group]
Length = 272
Score = 339 bits (870), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 161/250 (64%), Positives = 195/250 (78%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q +W + QD LK +LI ED F WNLP+ + + + + LKYIGGVD+SFSKEDPS
Sbjct: 19 QKQEWAKTQDMLKSKLILEDDFGWNLPSMGSNSDQSNANNKGNLKYIGGVDISFSKEDPS 78
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
AC +VVLD TL++V+E++ ++RLQVPY+PGFLAFREAP+LL LL+ MK HFYPQ
Sbjct: 79 TACAALVVLDAGTLEVVHEEFDVVRLQVPYIPGFLAFREAPILLGLLEKMKTNNQHFYPQ 138
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
VLMVDGNGLLHPRGFGLA H+GVLA+L TIGVGKNLHHVDGL S +R+ L+AKEN N++
Sbjct: 139 VLMVDGNGLLHPRGFGLACHLGVLADLPTIGVGKNLHHVDGLNQSELRRQLEAKENCNKE 198
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
+I L G SG+TWG AMRS P KPI+ISVGH ISLD+A+ IVK YR+PEPIRQADI
Sbjct: 199 LILLTGQSGTTWGAAMRSCPGLSKPIYISVGHRISLDSAIGIVKFCSNYRIPEPIRQADI 258
Query: 291 RSRDYLQKHQ 300
RS+ LQKHQ
Sbjct: 259 RSKVLLQKHQ 268
>gi|222636042|gb|EEE66174.1| hypothetical protein OsJ_22269 [Oryza sativa Japonica Group]
Length = 272
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/250 (64%), Positives = 195/250 (78%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q +W + QD LK +LI ED F WNLP+ + + + + LKYIGGVD+SFSKEDPS
Sbjct: 19 QKQEWAKTQDMLKSKLILEDDFGWNLPSMGSNSDQSNANNKGNLKYIGGVDISFSKEDPS 78
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
AC +VVLD TL++V+E++ ++RLQVPY+PGFLAFREAP+LL LL+ MK HFYPQ
Sbjct: 79 TACAALVVLDAGTLEVVHEEFDVVRLQVPYIPGFLAFREAPILLGLLEKMKTNNQHFYPQ 138
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
VLMVDGNGLLHPRGFGLA H+GVLA+L TIGVGKNLHHVDGL S +R+ L+AKEN N++
Sbjct: 139 VLMVDGNGLLHPRGFGLACHLGVLADLPTIGVGKNLHHVDGLNQSELRRQLEAKENCNKE 198
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
+I L G SG+TWG AM S P KPI+ISVGH ISLD+A+ IVK YR+PEPIRQADI
Sbjct: 199 LILLTGQSGTTWGAAMCSCPSLSKPIYISVGHRISLDSAIGIVKFCSNYRIPEPIRQADI 258
Query: 291 RSRDYLQKHQ 300
RS+ +LQKHQ
Sbjct: 259 RSKVFLQKHQ 268
>gi|242096626|ref|XP_002438803.1| hypothetical protein SORBIDRAFT_10g026510 [Sorghum bicolor]
gi|241917026|gb|EER90170.1| hypothetical protein SORBIDRAFT_10g026510 [Sorghum bicolor]
Length = 268
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 159/250 (63%), Positives = 199/250 (79%), Gaps = 3/250 (1%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q +W + QD LK +LI ED F W+LP + + + E E LKYIGG D+SF KEDP+
Sbjct: 18 QKQEWIKTQDMLKSKLILEDEFAWSLP---SVGSGSDEHERCKLKYIGGTDISFLKEDPA 74
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
AC +VVL+ TL++V+E+++++RLQVPY+PGFLAFREAPVLL LL+ +K A HFYPQ
Sbjct: 75 TACAAVVVLNADTLEVVHEEFNVVRLQVPYIPGFLAFREAPVLLGLLEKVKINAPHFYPQ 134
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
+LMVDGNGLLHPRGFGLA H+GVLA++ TIGVGKNLHHVDGL S VR+LL++KEN N++
Sbjct: 135 LLMVDGNGLLHPRGFGLACHLGVLADVPTIGVGKNLHHVDGLNQSEVRRLLESKENCNKE 194
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
+I L G SG+ WG AMRS P +LKPI+ISVGH ISLD+A++IVK CKYRVPEP RQADI
Sbjct: 195 LILLTGQSGTKWGTAMRSCPGSLKPIYISVGHRISLDSAMVIVKSCCKYRVPEPTRQADI 254
Query: 291 RSRDYLQKHQ 300
RS+ +LQK Q
Sbjct: 255 RSKAFLQKLQ 264
>gi|7270017|emb|CAB79833.1| putative protein [Arabidopsis thaliana]
Length = 325
Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/268 (61%), Positives = 199/268 (74%), Gaps = 22/268 (8%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
QL +WTE QDELKK+LI D FTW L +ST + ++ +LKY+GGVDMSF KED S
Sbjct: 16 QLEKWTEEQDELKKKLIAYDDFTWKLSSSTELSQGSE-----ILKYVGGVDMSFCKEDSS 70
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
+AC C+VVL+L +L++V+ D+SLLRL VPYVPGFLAFREAPVLL +L M+ + FYPQ
Sbjct: 71 VACACLVVLELPSLRVVHHDFSLLRLHVPYVPGFLAFREAPVLLQILQKMRDEKHPFYPQ 130
Query: 171 V-----------------LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
V LMVDGNG+LHPRGFGLA H+GVLA+L TIGVGKNLHHVDGL
Sbjct: 131 VSVLSISCFISCFALAKVLMVDGNGILHPRGFGLACHLGVLAHLPTIGVGKNLHHVDGLN 190
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
S V+Q L + N +E I L+G SG TWGV R T +LKPI++SVGH ISLD+AV +V
Sbjct: 191 QSEVKQSLQLQINEHEQTITLVGNSGITWGVGFRPTLSSLKPIYVSVGHRISLDSAVEVV 250
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQKHQS 301
K+TCKYRVPEPIRQADIRSR YLQKHQ+
Sbjct: 251 KITCKYRVPEPIRQADIRSRAYLQKHQT 278
>gi|42573103|ref|NP_974648.1| deoxyribonuclease V [Arabidopsis thaliana]
gi|124301148|gb|ABN04826.1| At4g31150 [Arabidopsis thaliana]
gi|332660466|gb|AEE85866.1| deoxyribonuclease V [Arabidopsis thaliana]
Length = 263
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/243 (66%), Positives = 193/243 (79%), Gaps = 5/243 (2%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
QDELKK+LI D FTW L +ST + ++ +LKY+GGVDMSF KED S+AC C+VV
Sbjct: 10 QDELKKKLIAYDDFTWKLSSSTELSQGSE-----ILKYVGGVDMSFCKEDSSVACACLVV 64
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
L+L +L++V+ D+SLLRL VPYVPGFLAFREAPVLL +L M+ + FYPQVLMVDGNG
Sbjct: 65 LELPSLRVVHHDFSLLRLHVPYVPGFLAFREAPVLLQILQKMRDEKHPFYPQVLMVDGNG 124
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGS 238
+LHPRGFGLA H+GVLA+L TIGVGKNLHHVDGL S V+Q L + N +E I L+G S
Sbjct: 125 ILHPRGFGLACHLGVLAHLPTIGVGKNLHHVDGLNQSEVKQSLQLQINEHEQTITLVGNS 184
Query: 239 GSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
G TWGV R T +LKPI++SVGH ISLD+AV +VK+TCKYRVPEPIRQADIRSR YLQK
Sbjct: 185 GITWGVGFRPTLSSLKPIYVSVGHRISLDSAVEVVKITCKYRVPEPIRQADIRSRAYLQK 244
Query: 299 HQS 301
HQ+
Sbjct: 245 HQT 247
>gi|440583717|emb|CCH47220.1| similar to endonuclease V [Lupinus angustifolius]
Length = 282
Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/265 (59%), Positives = 199/265 (75%), Gaps = 25/265 (9%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
Q+ L+++L+TED FTW L ++ +KE+E+ L+YIGGVD+SFS +D S+ACG +VV
Sbjct: 6 QEILREKLMTEDNFTWKLLSTQDKGEGSKEKEDEWLRYIGGVDVSFSNDDSSMACGTLVV 65
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
LD TL++VYED+SL+ L VPYVPGFLAFREAPVL+ +LD MK+ N FYPQ+LMVDGNG
Sbjct: 66 LDFNTLKVVYEDFSLVTLHVPYVPGFLAFREAPVLVEILDKMKRNGNPFYPQLLMVDGNG 125
Query: 179 LLHPRG-------------------------FGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+LHPRG FGLA HIGV+A+L TIG+GKNLHHVDGL
Sbjct: 126 ILHPRGKLFFPLSLHHLLFMWKLTKPLTCAGFGLACHIGVVADLPTIGIGKNLHHVDGLD 185
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
S VR+LL AKEN+++D+I L+G SG WG AMRST ++KPI+IS GH ISL TA+ IV
Sbjct: 186 QSKVRELLGAKENSSKDLITLVGSSGHIWGAAMRSTKASVKPIYISSGHRISLQTAIRIV 245
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQK 298
+MTCKYRVPEP+RQADIRSRDY++K
Sbjct: 246 QMTCKYRVPEPVRQADIRSRDYIRK 270
>gi|255561741|ref|XP_002521880.1| Endonuclease V, putative [Ricinus communis]
gi|223538918|gb|EEF40516.1| Endonuclease V, putative [Ricinus communis]
Length = 364
Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 154/255 (60%), Positives = 197/255 (77%), Gaps = 4/255 (1%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
++ W E Q LK+RLI ED F W LP T+++S K+ +VLLKY+GGVD+SF KEDPS
Sbjct: 16 KMPSWLESQYSLKRRLIEEDDFEWKLP---TSSSSIKDGHKVLLKYVGGVDVSFLKEDPS 72
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
+ACG +VVLDLQTLQ+VY+DYSL+RL+VPY+ GFLAFRE P+LL L++ MK N +YPQ
Sbjct: 73 VACGSLVVLDLQTLQLVYQDYSLVRLRVPYIAGFLAFREVPILLPLIEKMKNSQNPYYPQ 132
Query: 171 V-LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
L+ DGNG LHPRGFGLA H+GV+AN+ TIGVGKNLH+VDGL V +LL A+ + E
Sbjct: 133 ACLLYDGNGKLHPRGFGLACHLGVMANIPTIGVGKNLHYVDGLNEEEVGELLRARGRSGE 192
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQAD 289
D L+G SG TWG AMR+T + PI+IS+GH ISLDTA+ + KMT KY +PEP+RQAD
Sbjct: 193 DFAKLIGNSGCTWGAAMRATRGSYDPIYISIGHRISLDTAINLAKMTRKYHLPEPVRQAD 252
Query: 290 IRSRDYLQKHQSTCL 304
+RSR+Y++ H+ST L
Sbjct: 253 LRSREYIRNHKSTLL 267
>gi|308081615|ref|NP_001182809.1| uncharacterized protein LOC100501033 [Zea mays]
gi|223973983|gb|ACN31179.1| unknown [Zea mays]
Length = 268
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/250 (61%), Positives = 194/250 (77%), Gaps = 3/250 (1%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q +W + QD LK +LI ED F W+LP + + E E LKYIGG D+SF KEDPS
Sbjct: 18 QKQEWIKTQDMLKSKLILEDEFAWSLP---SVGSGLDEPEWCKLKYIGGTDISFLKEDPS 74
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
AC +VVL++ TL++V+E+++++RLQVPY+PGFLAFREAPVLL LL+ +K A HF PQ
Sbjct: 75 TACAAVVVLNVDTLEVVHEEFNVVRLQVPYIPGFLAFREAPVLLGLLEKVKINAPHFCPQ 134
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
+LMVDGNGLLHPRGFGLA H+GVLA++ T+GVGKNLHHVDGL S VR+LL +KEN N +
Sbjct: 135 LLMVDGNGLLHPRGFGLACHLGVLADIPTVGVGKNLHHVDGLNQSEVRRLLGSKENCNRE 194
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
++ L G SG+ WG+A+RS P + KPI++SVGH ISLD+A IVK C+YRVPEP RQADI
Sbjct: 195 LVLLTGQSGTKWGMAVRSCPGSSKPIYVSVGHRISLDSATAIVKSCCRYRVPEPTRQADI 254
Query: 291 RSRDYLQKHQ 300
RS+ +LQK Q
Sbjct: 255 RSKVFLQKLQ 264
>gi|326497295|dbj|BAK02232.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 264
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 153/250 (61%), Positives = 191/250 (76%), Gaps = 2/250 (0%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q +W QD LK RL+ ED F W+LP+ + ++ + + LKYIGGVD+SF KEDPS
Sbjct: 13 QKQEWARTQDVLKGRLVLEDDFEWSLPSVSPSSDQSGARGK--LKYIGGVDISFLKEDPS 70
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
AC VVLD TL IV+E++ ++R+QVPY+ GFLAFREAP+LL LL+ +K A+HFYPQ
Sbjct: 71 TACAAAVVLDADTLGIVHEEFDVVRMQVPYIAGFLAFREAPILLGLLEKIKINAHHFYPQ 130
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
++MVDGNGLLHPRGFGLA H+GVLA+L TIGVGKNLHHVDGL S VR+ L+AK N NE+
Sbjct: 131 LVMVDGNGLLHPRGFGLACHLGVLADLPTIGVGKNLHHVDGLNQSEVRKQLEAKGNCNEE 190
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
I L G SG+TWG AM S + +PI+ISVGH ISLD+A+ IVK +YR+PEP RQADI
Sbjct: 191 CISLTGQSGTTWGAAMCSCSGSSRPIYISVGHRISLDSAIGIVKYCSRYRIPEPTRQADI 250
Query: 291 RSRDYLQKHQ 300
RS+ +LQKHQ
Sbjct: 251 RSKVFLQKHQ 260
>gi|168033579|ref|XP_001769292.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679398|gb|EDQ65846.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 259
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/249 (53%), Positives = 177/249 (71%), Gaps = 8/249 (3%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEV-------LLKYIGGVDMSFSKEDPSI 111
QD +K++L+ D F W L +++ S E+ L+Y+GGVD+SF KE+ S
Sbjct: 3 QDAMKEKLVMYDDFPWRLNTTSSQEGSAPLPEDSGGVIDSSKLRYVGGVDLSFVKENSSF 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
ACG +VV+DL+T+Q+ YEDY ++L +PYV GFLAFRE PV L LL+ M +A YPQ+
Sbjct: 63 ACGALVVMDLETMQVAYEDYETVKLTMPYVAGFLAFRETPVFLGLLERMAAKAPLLYPQL 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
LMVDGNG+LHPRGFGLASH+GVLA++ TIG+GKNLHH+DGLT+ VR ++
Sbjct: 123 LMVDGNGILHPRGFGLASHLGVLADIPTIGIGKNLHHIDGLTNLEVRHIVSETNLQPGAG 182
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIR-QADI 290
+PL+G +G WG+A RS KP+FIS+GH ISLDTAV +V+ +RVPEP+R QAD+
Sbjct: 183 MPLVGRTGKVWGMAFRSHEGCSKPVFISIGHRISLDTAVEVVRRCTLHRVPEPVRQQADL 242
Query: 291 RSRDYLQKH 299
RSR+YL+KH
Sbjct: 243 RSREYLRKH 251
>gi|255561743|ref|XP_002521881.1| Endonuclease V, putative [Ricinus communis]
gi|223538919|gb|EEF40517.1| Endonuclease V, putative [Ricinus communis]
Length = 369
Score = 270 bits (690), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 176/248 (70%), Gaps = 10/248 (4%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L +W EIQ LK++LI ED W LP S+++ ++++E +LKY+GGVD+S KED SI
Sbjct: 22 LRRWKEIQYSLKQKLILEDDVPWKLPASSSSEA--EDDKEQVLKYVGGVDVSCLKEDQSI 79
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
ACG +VVLD T +++Y D + ++L VPY+ GFLAFREAPVL+ LL+ MK N YPQ+
Sbjct: 80 ACGTLVVLDFFTGKVLYHDSAYVKLDVPYIAGFLAFREAPVLVQLLEKMKNDNNPHYPQL 139
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
+MVDGNG+LHPRG VL NL TIG+GK LH VDGLT GV + L A+E++ E
Sbjct: 140 VMVDGNGVLHPRG--------VLENLPTIGIGKKLHCVDGLTKKGVTKCLQAEESSGESF 191
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
I L G SG +G AMRST ++KPIFIS+GH +SLDTA+ IVKM+CKYRVPEPIRQ
Sbjct: 192 ITLTGRSGRIYGAAMRSTEGSVKPIFISIGHRVSLDTAIKIVKMSCKYRVPEPIRQEPGA 251
Query: 292 SRDYLQKH 299
S + + H
Sbjct: 252 SWETITGH 259
>gi|302802636|ref|XP_002983072.1| hypothetical protein SELMODRAFT_117709 [Selaginella moellendorffii]
gi|300149225|gb|EFJ15881.1| hypothetical protein SELMODRAFT_117709 [Selaginella moellendorffii]
Length = 258
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/258 (49%), Positives = 175/258 (67%), Gaps = 4/258 (1%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
+ AA+ +L W + Q LK+RL+ D F W +P + K E + LKYIGG+D+SF
Sbjct: 3 EKAAKKKL--WIQEQQALKQRLVCSDSFPWVVPEKFGYDCEGKGE--IKLKYIGGMDLSF 58
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
KED ++AC +VV+D T+ VYED ++ L +PY+PGFLAFRE+P LLSLL MK
Sbjct: 59 VKEDETVACSALVVIDAATMATVYEDLEIVSLDMPYIPGFLAFRESPALLSLLARMKSSR 118
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAK 224
+PQ+LMVDGNG+LHPRGFGLASH+GVLA++ T+G+ K+L VDGL+ V++
Sbjct: 119 PEIFPQLLMVDGNGVLHPRGFGLASHLGVLADVPTLGIAKSLFEVDGLSEREVKRSARNS 178
Query: 225 ENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEP 284
D + L+G SG WG A+RST + + P+F+S GH ISL+T V IV+ CK+RVPEP
Sbjct: 179 LLRAGDAMDLVGRSGKVWGSALRSTGECVNPVFVSTGHRISLETGVEIVRKLCKFRVPEP 238
Query: 285 IRQADIRSRDYLQKHQST 302
+R AD +SR+YL+ + T
Sbjct: 239 VRLADKKSREYLRVNGYT 256
>gi|302764802|ref|XP_002965822.1| hypothetical protein SELMODRAFT_84652 [Selaginella moellendorffii]
gi|300166636|gb|EFJ33242.1| hypothetical protein SELMODRAFT_84652 [Selaginella moellendorffii]
Length = 258
Score = 260 bits (664), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 127/258 (49%), Positives = 175/258 (67%), Gaps = 4/258 (1%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
+ AA+ +L W + Q LK+RL+ D F W +P + K E E LKYIGG+D+SF
Sbjct: 3 EKAAKKKL--WIQEQQALKQRLVCSDSFPWVIPEKFGYDCEGKGEIE--LKYIGGMDLSF 58
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
KE+ ++AC +VV+D T+ VYED ++ L +PY+PGFLAFRE+P LLSLL MK
Sbjct: 59 VKENETVACSALVVIDAVTMATVYEDLEIVSLDMPYIPGFLAFRESPALLSLLARMKSSR 118
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAK 224
+PQ+LMVDGNG+LHPRGFGLASH+GVLA++ T+G+ K+L VDGL+ V++
Sbjct: 119 PEIFPQLLMVDGNGVLHPRGFGLASHLGVLADVPTLGIAKSLFEVDGLSEREVKRSARNS 178
Query: 225 ENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEP 284
D + L+G SG WG A+RST + + P+F+S GH ISL+T V IV+ CK+RVPEP
Sbjct: 179 LLRAGDAMDLVGRSGKVWGSALRSTGECVHPVFVSTGHRISLETGVEIVRKLCKFRVPEP 238
Query: 285 IRQADIRSRDYLQKHQST 302
+R AD +SR+YL+ + T
Sbjct: 239 VRLADKKSREYLRVNGYT 256
>gi|255632926|gb|ACU16817.1| unknown [Glycine max]
Length = 224
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/230 (58%), Positives = 168/230 (73%), Gaps = 20/230 (8%)
Query: 37 EREALASPDPAAQAQLNQ-----WTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEE 91
E+++ P+ A+Q++ + W Q+ L+++L TED F W L +KEEE
Sbjct: 2 EKKSPEPPEEASQSRDSSRDNQTWITAQNILREKLTTEDCFAWKL------QAGSKEEEA 55
Query: 92 VLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
L+Y+GGVD+SFSK+DPS ACG +VVLD TLQ++Y+D+SL+ LQVPYVPGFLAFREAP
Sbjct: 56 --LRYVGGVDISFSKDDPSRACGTLVVLDFHTLQVLYQDFSLVTLQVPYVPGFLAFREAP 113
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
VLL LL+ MK+ N FYPQ+LMVDGNG+LHPRGFGLA HIGV ANL TIG+GKNLH VDG
Sbjct: 114 VLLQLLEKMKRSNNPFYPQLLMVDGNGILHPRGFGLACHIGVEANLPTIGIGKNLHRVDG 173
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTW----GVAMRSTPDTLKPIF 257
LTHS VR+LL A+EN +ED I L G W GVAMRST ++KPIF
Sbjct: 174 LTHSRVRELLGAEENCSEDFINL---GGLFWAYNGGVAMRSTQGSIKPIF 220
>gi|320166069|gb|EFW42968.1| endonuclease V family protein [Capsaspora owczarzaki ATCC 30864]
Length = 283
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 172/260 (66%), Gaps = 1/260 (0%)
Query: 41 LASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLP-NSTTTNTSTKEEEEVLLKYIGG 99
L SP + L+ WT+ Q+ LK+RL T D T P ++T L+ +GG
Sbjct: 16 LVSPSEVDEQVLSSWTDEQNRLKERLDTTDNATGFAPVGQGEAESATDGLGLPPLRLVGG 75
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K DP AC +VVL +++VYE++ ++ L +PY+PGFLAFRE L++LLD
Sbjct: 76 VDISFVKGDPKAACASLVVLSFPEMKVVYENFEMVELTLPYIPGFLAFREVNFLVALLDR 135
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
++ + PQ++ VDGNG+LH RGFGLASH+GVL ++ TIG+GK + HVDG+ + V+
Sbjct: 136 LRAQQPELLPQLIFVDGNGVLHQRGFGLASHLGVLVDIPTIGIGKTIFHVDGIDMNHVKT 195
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
++ K +++ L+G SG WG A+RST D+ P+FISVGH ISLD A+ I K +C +
Sbjct: 196 MVVPKLSHSGATAKLVGISGREWGAALRSTEDSTNPVFISVGHRISLDHAIRITKTSCLH 255
Query: 280 RVPEPIRQADIRSRDYLQKH 299
R+PEP+RQAD+RSR YL+ H
Sbjct: 256 RIPEPVRQADLRSRQYLRDH 275
>gi|66822431|ref|XP_644570.1| endonuclease V [Dictyostelium discoideum AX4]
gi|66822653|ref|XP_644681.1| endonuclease V [Dictyostelium discoideum AX4]
gi|60472693|gb|EAL70644.1| endonuclease V [Dictyostelium discoideum AX4]
gi|60472851|gb|EAL70800.1| endonuclease V [Dictyostelium discoideum AX4]
Length = 322
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 123/286 (43%), Positives = 175/286 (61%), Gaps = 47/286 (16%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q ++W EIQ+ELKK LI +D F + + + NT+ LKYIGGVD+SF K++
Sbjct: 27 QQDKWIEIQNELKKSLIEKDDFNFKIDDENKMNTT--------LKYIGGVDISFVKDNDI 78
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA--NHFY 168
AC ++V++ +L+IVY+D ++L Y+PGFLAFRE P L+ L++ +K+ NH
Sbjct: 79 DACASLIVIEYPSLKIVYKDIEFVKLSELYIPGFLAFRETPHLIKLINKLKQSITYNHLL 138
Query: 169 PQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE--- 225
PQ++M+DGNG+LHPRGFGLASH+GVL ++ TIGVGK HVDGL+ ++ ++++
Sbjct: 139 PQIIMIDGNGILHPRGFGLASHLGVLIDIPTIGVGKTFFHVDGLSTKEIKSKVESERLKY 198
Query: 226 -------------------------------NNNEDI---IPLMGGSGSTWGVAMRSTPD 251
N EDI +PL G SG WG A+ S +
Sbjct: 199 LSTTTTTDVTTTPSPNNNKNNKNNKIKNNNNNIREDINIEVPLKGESGRIWGSAILSNSN 258
Query: 252 TLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQ 297
PI++SVGH ISL+TA+ +VK+T YRVPE IRQAD+ SRDY++
Sbjct: 259 CKNPIYVSVGHRISLETALKVVKLTSPYRVPESIRQADLLSRDYIR 304
>gi|326435287|gb|EGD80857.1| endonuclease V [Salpingoeca sp. ATCC 50818]
Length = 288
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 115/245 (46%), Positives = 158/245 (64%), Gaps = 15/245 (6%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
+W E Q +LK++LI ED W L + ++ IGGVD+SF K + A
Sbjct: 25 QRWAEEQRQLKEKLILEDKHEWTLDD---------------VRRIGGVDISFIKGNDVDA 69
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
C +VVL+ +L++VYED ++RL+ PY+PGFLAFRE + + +D ++ PQV+
Sbjct: 70 CVSLVVLNYPSLEVVYEDCHMVRLEQPYIPGFLAFREVSHIQTCVDKLRTTKPELLPQVI 129
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
MVDGNG+LHPRG GLASH+G+ ++ TIG+GK L VDGL V+ A+ D +
Sbjct: 130 MVDGNGILHPRGLGLASHLGITVDIPTIGLGKKLFMVDGLDTKEVQAKSHAELKKGGDWL 189
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRS 292
PL+G SG TWG A+RST + PI++SVGH ISLDTA +V C+YRVPEP+RQAD RS
Sbjct: 190 PLVGISGQTWGAALRSTDTNINPIYVSVGHRISLDTAAALVGRCCQYRVPEPVRQADQRS 249
Query: 293 RDYLQ 297
R +L+
Sbjct: 250 RTFLR 254
>gi|330793925|ref|XP_003285032.1| hypothetical protein DICPUDRAFT_75974 [Dictyostelium purpureum]
gi|325085059|gb|EGC38474.1| hypothetical protein DICPUDRAFT_75974 [Dictyostelium purpureum]
Length = 299
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 171/271 (63%), Gaps = 22/271 (8%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
P + +W IQ+ELK LI D +++P + ++E LKYIGGVD+SF
Sbjct: 25 PEEKEIQEKWINIQNELKTSLIEIDQIDFSIPGVGDGDNQNHKKE---LKYIGGVDISFV 81
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
K++ AC ++VL+ +L+IVY+D ++L +PY+PGFLAFRE P L+ L++ +K+ +
Sbjct: 82 KDNQEDACAALIVLEYPSLKIVYKDIEFVKLNLPYIPGFLAFREVPHLIKLIERLKESKD 141
Query: 166 --HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDA 223
H PQVLM+DGNG+LHPRGFGLASH+G+LA++ TIGVGK HVD L ++Q ++
Sbjct: 142 NCHLVPQVLMIDGNGILHPRGFGLASHLGLLADIPTIGVGKTFFHVDNLNTKDIKQKVEN 201
Query: 224 KE----------------NNNEDI-IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
+ N++ DI + L G SG WG A+ S P+++S GH +SL
Sbjct: 202 ERLSYLEQQKQKGNNNNKNDDMDICVKLEGESGRVWGAAILSNKSCKNPVYVSQGHRLSL 261
Query: 267 DTAVMIVKMTCKYRVPEPIRQADIRSRDYLQ 297
DT + +VK+T YRVPE IRQAD+ SRD+++
Sbjct: 262 DTTLKLVKLTTTYRVPESIRQADLLSRDFIR 292
>gi|403334040|gb|EJY66162.1| Endonuclease V family protein [Oxytricha trifallax]
Length = 358
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/248 (46%), Positives = 159/248 (64%), Gaps = 10/248 (4%)
Query: 53 NQWTEIQDELKKRLI-TEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
++W Q+ LK++LI ED F+W + S +N++ L+YI +D+S+SK D
Sbjct: 85 DKWMLEQNTLKQQLIEDEDKFSWVIDPSNYSNST--------LRYIAAIDISYSKTDDRK 136
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
A ++V T++I+YED+ PY+PGFLAF+E PV L D +K + +P V
Sbjct: 137 AVAALIVCQYPTMKILYEDFEKETADYPYIPGFLAFKEVPVYSILFDRLKAKEPDLWPDV 196
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH RGFG ASH+GVL NL +IGVGK + VDGLT GV+ L D D+
Sbjct: 197 LLVDGNGILHTRGFGCASHVGVLQNLPSIGVGKTVFAVDGLTQLGVKDLCDQTLLKGGDL 256
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC-KYRVPEPIRQADI 290
+ L+G SG WG A+RST D+ PI ISVGH I+L TA+ +VK K R+PEPIRQAD+
Sbjct: 257 VNLVGKSGKVWGAALRSTSDSKNPIIISVGHRITLQTAIDVVKACIKKVRIPEPIRQADL 316
Query: 291 RSRDYLQK 298
+SR ++K
Sbjct: 317 KSRSLVKK 324
>gi|328876437|gb|EGG24800.1| endonuclease V [Dictyostelium fasciculatum]
Length = 302
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 113/250 (45%), Positives = 164/250 (65%), Gaps = 3/250 (1%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVL--LKYIGGVDMSFSKEDPS 110
+QW IQ+ELK + IT D W +PN+ + ST LKY+GGVD+SF K++
Sbjct: 28 SQWIVIQNELKTKHITHDQIDWVIPNNNNNSNSTSTSTTTSTTLKYVGGVDISFVKDNDE 87
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
AC +++L+ +L++V+++ ++L +PY+PGFLAFRE P L L+D +K + FYPQ
Sbjct: 88 DACASLIILEYPSLKVVHKEMEFVKLDLPYIPGFLAFRECPSLTRLIDRVKTQHPRFYPQ 147
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
VL+VDGNG LHPR FGLA H+GVL +L TIG+GK HVDGL V+ + D
Sbjct: 148 VLLVDGNGFLHPRAFGLACHLGVLCDLPTIGIGKTFFHVDGLDTKAVKTAFSQQCKQAGD 207
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM-TCKYRVPEPIRQAD 289
L G SG+ WG A+ S ++ PIF+SVGH +SL +++ +V+ T R+PEP+RQAD
Sbjct: 208 HYDLTGDSGTVWGSAVLSHINSKNPIFVSVGHRLSLASSLQVVQACTTSNRIPEPVRQAD 267
Query: 290 IRSRDYLQKH 299
+ SRD+++K+
Sbjct: 268 LLSRDFIRKN 277
>gi|291223300|ref|XP_002731652.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 278
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/246 (46%), Positives = 157/246 (63%), Gaps = 11/246 (4%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
+W IQDELK +LITE+ W S K E LKYIGGVD+SF K D AC
Sbjct: 29 KWESIQDELKTKLITENTEEWQ---------SMKCFEG--LKYIGGVDLSFVKGDDVNAC 77
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
C+VV L+++Y D++++ L PY+PGFLAFRE L+ L+ +K PQV++
Sbjct: 78 ACLVVCSFPDLEVLYTDFTMVELTAPYIPGFLAFREVDFLVDCLNKLKFTKPEIVPQVIL 137
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNGLLHPRGFG A H+GV+ ++ IGV K L VDGL + + D+ P
Sbjct: 138 VDGNGLLHPRGFGTACHLGVVTDIPCIGVAKKLFQVDGLEKNEDHLQKASFLKKGGDVFP 197
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
L+G SG +G+A+RS + P++IS+GH I+L TA+ + + CK+RVPEP+RQADI+SR
Sbjct: 198 LVGESGRVYGMALRSCDKSTNPVYISIGHRINLPTALKLTQSCCKHRVPEPVRQADIQSR 257
Query: 294 DYLQKH 299
+YL++H
Sbjct: 258 EYLRQH 263
>gi|327264716|ref|XP_003217157.1| PREDICTED: putative endonuclease FLJ39025-like [Anolis
carolinensis]
Length = 503
Score = 224 bits (571), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/254 (45%), Positives = 155/254 (61%), Gaps = 11/254 (4%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
P Q L W Q +LK +I ED W S V L+ +GGVD+S+
Sbjct: 11 PLEQDTLRGWERDQGQLKANVIEEDTQEWQSSPSF-----------VGLERVGGVDLSYV 59
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
K D AC +VVL LQ++YED ++ + PYV GFLAFREAP L+ + +++RA
Sbjct: 60 KGDDRSACASLVVLSYPDLQVLYEDCRMVGVSAPYVAGFLAFREAPFLVEAVQRLEERAP 119
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE 225
PQVL VDGNG+LH RGFG+A H+GVL L IGV KNL VDGL++ + +
Sbjct: 120 GLVPQVLFVDGNGILHHRGFGIACHLGVLTGLPCIGVAKNLLQVDGLSNDDLHKEQIQAL 179
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPI 285
D PL+ SG+ G+A+RS + KP+++SVGH +SL +AV +V C+YRVPEPI
Sbjct: 180 QAGGDTFPLLSASGTILGMALRSYAKSTKPVYVSVGHKMSLPSAVRLVHSCCRYRVPEPI 239
Query: 286 RQADIRSRDYLQKH 299
RQADIRSR+Y++KH
Sbjct: 240 RQADIRSREYIRKH 253
>gi|348689730|gb|EGZ29544.1| hypothetical protein PHYSODRAFT_294653 [Phytophthora sojae]
Length = 652
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 154/246 (62%), Gaps = 4/246 (1%)
Query: 61 ELKKRLITEDFFTWNL-PNSTTTNTST---KEEEEVLLKYIGGVDMSFSKEDPSIACGCI 116
+LK +LI D W L P++ + ++ LK + GVD+SF K AC I
Sbjct: 389 QLKTQLIERDEVQWQLGPDAGDAGDAAPMDDTKDRKALKRVAGVDISFLKGSNEHACASI 448
Query: 117 VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDG 176
VVL+ +L ++YE ++ + L PY+ GFLAFRE P L L D++++R P V +VDG
Sbjct: 449 VVLEYPSLSVLYEAFTYVSLPAPYIAGFLAFREVPALTKLYDDLRRRRPDLLPDVTLVDG 508
Query: 177 NGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMG 236
NG+LHP+GFGLASH GVLA + TIGVGK HVDGLT V+ L+ + D++ L G
Sbjct: 509 NGVLHPQGFGLASHFGVLAGIPTIGVGKTFLHVDGLTKLDVKGLMARAREEHHDLVKLAG 568
Query: 237 GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYL 296
SG WG A+ T P+++SVGH +SLD++V I + +YRVPEPIRQAD+RSR+ +
Sbjct: 569 KSGKVWGAALCGTAGVKNPVYVSVGHMLSLDSSVAIAQACSQYRVPEPIRQADLRSREVI 628
Query: 297 QKHQST 302
++ +S
Sbjct: 629 RQWESA 634
>gi|50745370|ref|XP_420082.1| PREDICTED: endonuclease V [Gallus gallus]
Length = 285
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 154/259 (59%), Gaps = 11/259 (4%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMS 103
P A L +W QD L+ ++ ED W +E L+ +GGVD+S
Sbjct: 6 PKAVPAATLRRWECEQDRLRAAVVPEDTERWQ-----------REPGWAGLQRVGGVDLS 54
Query: 104 FSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKR 163
+ K AC +VVL L+++YED ++ + PYV GFLAFRE P ++ ++ +++
Sbjct: 55 YVKGGDGSACASLVVLGYPGLEVLYEDCRMVAVSAPYVAGFLAFREVPFMVEAVERLQRE 114
Query: 164 ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDA 223
PQVL+VDGNGLLH RGFG+A H+GVL +L +GV KNL HVDGL + +
Sbjct: 115 QPGLRPQVLLVDGNGLLHQRGFGVACHLGVLTDLPCVGVAKNLLHVDGLVKDELHKEQIR 174
Query: 224 KENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPE 283
D PL G SG+ G+A+R ++ KP++ISVGH I L+TAV +VK CKYR+PE
Sbjct: 175 SLQKKGDTFPLTGTSGAVLGMALRGCNNSSKPLYISVGHRICLETAVRLVKSCCKYRIPE 234
Query: 284 PIRQADIRSRDYLQKHQST 302
PIRQADIRSR Y+QK +
Sbjct: 235 PIRQADIRSRAYIQKQMCS 253
>gi|290984466|ref|XP_002674948.1| predicted protein [Naegleria gruberi]
gi|284088541|gb|EFC42204.1| predicted protein [Naegleria gruberi]
Length = 260
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/251 (43%), Positives = 161/251 (64%), Gaps = 13/251 (5%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
++W QDELK++L D ++ PN + LK++GGVD+SF K DP A
Sbjct: 19 SEWIIQQDELKEKLSIRDEIDFD-PNDLDST----------LKFVGGVDISFDKTDPRDA 67
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
++VL L++VYE Y +R+ PY+PGFLAFRE P L +++ M + PQ++
Sbjct: 68 IASLIVLSFPDLKVVYEKYEKVRMAHPYIPGFLAFREVPHLKIMIEEML-NSTQPKPQII 126
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
+VDGNG+LH RGFGLA+H+GV AN+ TIGV K L +VDGLT GV++L+ K D
Sbjct: 127 LVDGNGILHQRGFGLAAHLGVEANIPTIGVAKKLLYVDGLTREGVKELVAEKLKKKGDYA 186
Query: 233 PLMG-GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
L+G SG GV ++ T +++P+++S+GH + LDTA+ +V MTC +++PEPIRQAD+R
Sbjct: 187 DLIGETSGQVLGVVLQPTDKSIRPLYVSIGHKVCLDTAIKVVTMTCIHKIPEPIRQADLR 246
Query: 292 SRDYLQKHQST 302
SR + + +
Sbjct: 247 SRQLVDQQAKS 257
>gi|334323004|ref|XP_001380144.2| PREDICTED: putative endonuclease FLJ39025-like [Monodelphis
domestica]
Length = 312
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 156/253 (61%), Gaps = 11/253 (4%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
P + L++W Q +LK +I D W T L +GGVD+SF
Sbjct: 8 PPLRETLSRWKREQAQLKASVIDHDTEAWQQKTDFTG-----------LFRVGGVDISFI 56
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
K D AC +VVL L+++YE++ ++ L PY+ GFLAFRE L+ + ++K+
Sbjct: 57 KGDDVRACASLVVLSYPELEVLYEEHRMVNLTAPYISGFLAFREVSFLVDAIQRLQKKKP 116
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE 225
PQVL+VDGNG+LH RGFG+A HIG+L +L IGV K L VDGL ++ + +
Sbjct: 117 DLMPQVLLVDGNGVLHHRGFGVACHIGILTDLPCIGVAKKLLQVDGLKNNDLHKEKVRIR 176
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPI 285
N D PLMG SGS G+A++S + KP++ISVGH +SL+TAV +++ C+YR+PEPI
Sbjct: 177 NTGGDTFPLMGDSGSILGMALKSHNKSSKPLYISVGHKVSLETAVHLIQACCRYRIPEPI 236
Query: 286 RQADIRSRDYLQK 298
RQADIRSR+Y+++
Sbjct: 237 RQADIRSREYVRR 249
>gi|354468963|ref|XP_003496919.1| PREDICTED: endonuclease V-like [Cricetulus griseus]
Length = 338
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/259 (42%), Positives = 160/259 (61%), Gaps = 11/259 (4%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + ++ L W Q LK R++ D W ++ L+ +GG
Sbjct: 2 ALEAAERPSEETLLLWEREQARLKTRVVPRDTEAWQ-----------RDPAFPGLRRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF D S AC +VVL LQ+VYED ++RL+ PYV GFLAFRE P L+ L+
Sbjct: 51 VDVSFVPGDSSRACASLVVLSYPELQVVYEDSHMVRLKAPYVSGFLAFREVPFLVELVQR 110
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
++++ PQVL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 111 LQEKEPGLMPQVLLVDGNGVLHQRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNSLHK 170
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
+ D PLMG SG+ G+A++S + KP+++SVGH ISL+ AV + C++
Sbjct: 171 EKIVLLQSGGDTFPLMGNSGTVLGMALKSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRF 230
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEPIRQADIRSR+Y+++
Sbjct: 231 RIPEPIRQADIRSREYIRR 249
>gi|156376880|ref|XP_001630586.1| predicted protein [Nematostella vectensis]
gi|156217610|gb|EDO38523.1| predicted protein [Nematostella vectensis]
Length = 251
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/247 (45%), Positives = 153/247 (61%), Gaps = 18/247 (7%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
+ +W Q LK++L+T D W L N E L IGGVD+SF K D
Sbjct: 11 IERWKREQLTLKEKLVTIDKVKWKLKLDDDDNDDNDER----LTLIGGVDISFPKGDDVH 66
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC C+V++ L++VYED++++ L PYVP FLAFRE L+ + +++R PQV
Sbjct: 67 ACACLVIISYPGLEVVYEDFAMVHLTSPYVPEFLAFREVEFLVESIKRLQQRKPDMMPQV 126
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS-----GVRQLLDAKEN 226
+MVDGNG+LHPRGFG+ASH+GV+ ++ TIGV KNL HVDG+ + LL K N
Sbjct: 127 IMVDGNGILHPRGFGIASHLGVITDIPTIGVAKNLFHVDGIEKGEEHTKQISCLLQDKGN 186
Query: 227 NNEDIIPLMGGSGSTWGVAMRS-----TPDTLKPIFISVGHCISLDTAVMIVKMTCKYRV 281
+ PL+G SG+TWG+A+RS T KPI++SVGH +SLDTAV +V C+YR+
Sbjct: 187 S----FPLVGKSGTTWGMALRSSKKSTTTPVCKPIYVSVGHKVSLDTAVKLVDACCRYRI 242
Query: 282 PEPIRQA 288
PEP RQ
Sbjct: 243 PEPTRQV 249
>gi|281211378|gb|EFA85543.1| endonuclease V [Polysphondylium pallidum PN500]
Length = 315
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/283 (39%), Positives = 169/283 (59%), Gaps = 41/283 (14%)
Query: 55 WTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVL--------------------- 93
W +Q++LK+++I D + +P +T+ T EE+++
Sbjct: 33 WKNVQNDLKQQMIEIDNVDFEIPFTTSDET---EEDKIDIEEVDDDDDEKEEQTTTTATT 89
Query: 94 ----------------LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQ 137
L+Y+GGVD+SF K++ AC IV+L +L++VYE Y ++L
Sbjct: 90 TTSTAAASTTPNKSNKLRYVGGVDISFVKDNMEDACASIVILKYPSLKVVYEIYEFVKLT 149
Query: 138 VPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANL 197
+PY+PGFLAFRE P L+ L++ +K +PQVL+VDGNG+LH RGFGLA H+GVLA+L
Sbjct: 150 LPYIPGFLAFRECPSLIPLIERIKTERPELFPQVLLVDGNGMLHTRGFGLACHLGVLADL 209
Query: 198 TTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIF 257
TIGVGK VDG++ V+ + + D +PL G SG WG A+ S ++ IF
Sbjct: 210 PTIGVGKTFFCVDGMSSKQVKLDVAKHCKSAGDYLPLQGESGKIWGAAVISHSNSTNAIF 269
Query: 258 ISVGHCISLDTAVMIVKM-TCKYRVPEPIRQADIRSRDYLQKH 299
IS GH +SLD+++ I++ T RVPEP+RQAD+RSRD+++K+
Sbjct: 270 ISQGHRLSLDSSLKIIRACTTTNRVPEPVRQADLRSRDFIRKN 312
>gi|426238383|ref|XP_004013134.1| PREDICTED: endonuclease V isoform 1 [Ovis aries]
Length = 298
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 154/253 (60%), Gaps = 19/253 (7%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L W Q LK R++ D W + + L+ +GGVD+SF K+D
Sbjct: 14 LLDWKREQASLKARVVDLDTEAWQRDPAFSG-----------LQRVGGVDVSFVKDDSGS 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L+++YED ++ L PYV GFLAFRE P L+ + +++R PQV
Sbjct: 63 ACASLVVLSYPELEVLYEDCRMVTLTAPYVSGFLAFRELPFLVDAVQQLRQREPCLMPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVR----QLLDAKENN 227
L VDGNG+LH RGFG+A H+GVL +L IGV K L VDGL ++ + QLL A
Sbjct: 123 LFVDGNGVLHHRGFGVACHLGVLTDLPCIGVAKKLLQVDGLENNALHKEKIQLLKA---- 178
Query: 228 NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQ 287
D PLMGGSG+ G A+RS + KP+++SVGH ISL+ AV + CK+R+PEP+RQ
Sbjct: 179 GGDSFPLMGGSGTILGRALRSHDHSTKPLYVSVGHKISLEAAVRLTHSCCKFRIPEPVRQ 238
Query: 288 ADIRSRDYLQKHQ 300
ADIRSRDY+++ Q
Sbjct: 239 ADIRSRDYIRRTQ 251
>gi|413943467|gb|AFW76116.1| hypothetical protein ZEAMMB73_174289 [Zea mays]
Length = 584
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/195 (55%), Positives = 138/195 (70%), Gaps = 11/195 (5%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q +W + QD LK +LI ED F W+LP + + E E LKYIGG D+SF KEDPS
Sbjct: 18 QKQEWIKTQDMLKSKLILEDEFAWSLP---SVGSGLDEPEWCKLKYIGGTDISFLKEDPS 74
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
AC +VVL+ TL++V+E+++++RLQVPY+PGFLAFREAPVLL LL+ +K A HF PQ
Sbjct: 75 TACAAVVVLNADTLEVVHEEFNVVRLQVPYIPGFLAFREAPVLLGLLEKVKINAPHFCPQ 134
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
LLHP GFGLA H+GVLA++ TIGVGKNLH VDGL S VR+LL +KEN N +
Sbjct: 135 --------LLHPAGFGLACHLGVLADIPTIGVGKNLHQVDGLNQSEVRRLLGSKENCNRE 186
Query: 231 IIPLMGGSGSTWGVA 245
++ L G SG+ WG+
Sbjct: 187 LVLLTGQSGTKWGMV 201
>gi|73964859|ref|XP_850549.1| PREDICTED: endonuclease V [Canis lupus familiaris]
Length = 442
Score = 217 bits (552), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 163/265 (61%), Gaps = 22/265 (8%)
Query: 38 REALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYI 97
REA P + L+ W Q +LK L+ +D W ++ L+ +
Sbjct: 3 REAAEKP---PEEILSLWKREQAQLKALLVEQDTEAWQ-----------RDPAFSGLQRV 48
Query: 98 GGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GGVD+SF K D + AC +VVL L++VYED S++ L PY+ GFLAFRE P L+ +
Sbjct: 49 GGVDLSFVKGDSASACASLVVLSYPELEVVYEDCSMVNLTAPYMSGFLAFREVPFLVDAV 108
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL----T 213
++++ H PQVL VDGNG+LH RGFG+A H+G+L +L IGV K L VDGL
Sbjct: 109 QRLQEKEPHMVPQVLFVDGNGVLHHRGFGVACHLGILTDLPCIGVAKKLLQVDGLENNAQ 168
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
H +LL A+ D PL+GGSG+ G+A++S + KP+++SVGH ISL++AV +
Sbjct: 169 HKEKIRLLQAE----GDTFPLIGGSGTVLGMALKSHSHSSKPLYVSVGHRISLESAVRLT 224
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQK 298
+ C++R PEP+RQADIRSRDY+++
Sbjct: 225 RSCCRFRSPEPVRQADIRSRDYIRR 249
>gi|395826801|ref|XP_003786603.1| PREDICTED: endonuclease V [Otolemur garnettii]
Length = 320
Score = 216 bits (550), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/251 (44%), Positives = 153/251 (60%), Gaps = 19/251 (7%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L WT Q LK R++ + W + + L +GGVD+SF K D
Sbjct: 14 LALWTREQARLKARVVVRNTEAWQRDPAFSG-----------LHRVGGVDVSFVKGDSGS 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL LQ++YED S++ L PYV GFLAFREAP L+ + ++ + PQV
Sbjct: 63 ACASLVVLSYPELQVLYEDSSMVSLTAPYVSGFLAFREAPFLVDAVQRLQAKEPSLMPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT----HSGVRQLLDAKENN 227
++VDGNG+LH +GFG+A H+GVL++L IGV K L VDGL H QLL A
Sbjct: 123 ILVDGNGVLHHQGFGVACHLGVLSDLPCIGVAKKLLQVDGLENNTLHREKIQLLQA---- 178
Query: 228 NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQ 287
D PLMG SG+ GVA++S + KP+++SVGH ISL+TAV + C++R+PEP+RQ
Sbjct: 179 GGDYFPLMGSSGAVLGVALKSHDHSTKPLYVSVGHKISLETAVRLTHHCCRFRIPEPVRQ 238
Query: 288 ADIRSRDYLQK 298
ADIRSR+Y+ +
Sbjct: 239 ADIRSREYIHR 249
>gi|115905897|ref|XP_794487.2| PREDICTED: endonuclease V-like [Strongylocentrotus purpuratus]
Length = 329
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/264 (39%), Positives = 158/264 (59%), Gaps = 19/264 (7%)
Query: 39 EALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIG 98
E++ D + W Q +LK+ L+ D TW ++ L YIG
Sbjct: 3 ESVKGNDLIDEKTARSWESEQRKLKEELVDHDTETWQSDGPPFSD----------LHYIG 52
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD+SF K S+AC ++V L++VYED + + PY+ GFLAFRE P + LD
Sbjct: 53 GVDISFVKTSTSLACVSLIVCSFPDLEVVYEDCQTIHMTQPYISGFLAFREVPFFMERLD 112
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL----TH 214
++ PQ++ VDGNG+LHPRGFG A H+GVL+ + T+G+ K L +D + H
Sbjct: 113 RLRDTKPELLPQIIFVDGNGILHPRGFGTACHLGVLSGIPTVGIAKKLTQIDNIQKDEEH 172
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
+ +L E+ + L+G SG TWG A+RS T+ PI++SVGH IS++TA+++V+
Sbjct: 173 AHKVSVLREGESFD-----LIGESGKTWGKALRSCEKTINPIYVSVGHRISVETAIILVQ 227
Query: 275 MTCKYRVPEPIRQADIRSRDYLQK 298
+ C+YR+PEP+RQAD+RSR+YL++
Sbjct: 228 VCCQYRIPEPVRQADMRSREYLRQ 251
>gi|115469388|ref|NP_001058293.1| Os06g0663600 [Oryza sativa Japonica Group]
gi|52075928|dbj|BAD45874.1| endonuclease V protein-like [Oryza sativa Japonica Group]
gi|113596333|dbj|BAF20207.1| Os06g0663600 [Oryza sativa Japonica Group]
gi|215704736|dbj|BAG94764.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 122/156 (78%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q +W + QD LK +LI ED F WNLP+ + + + + LKYIGGVD+SFSKEDPS
Sbjct: 19 QKQEWAKTQDMLKSKLILEDDFGWNLPSMGSNSDQSNANNKGNLKYIGGVDISFSKEDPS 78
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
AC +VVLD TL++V+E++ ++RLQVPY+PGFLAFREAP+LL LL+ MK HFYPQ
Sbjct: 79 TACAALVVLDAGTLEVVHEEFDVVRLQVPYIPGFLAFREAPILLGLLEKMKTNNQHFYPQ 138
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
VLMVDGNGLLHPRGFGLA H+GVLA+L TIGVGKN+
Sbjct: 139 VLMVDGNGLLHPRGFGLACHLGVLADLPTIGVGKNV 174
>gi|257467544|ref|NP_001158108.1| endonuclease V isoform 1 [Mus musculus]
gi|338817872|sp|Q8C9A2.2|ENDOV_MOUSE RecName: Full=Endonuclease V
gi|148702762|gb|EDL34709.1| RIKEN cDNA A730011L01, isoform CRA_b [Mus musculus]
Length = 338
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK R++ D W S + L+ +GGVD+SF K D
Sbjct: 14 LSLWKGEQARLKARVVDRDTEAWQRDPSFSG-----------LQKVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L++VYED ++ L+ PYV GFLAFRE P L+ L+ ++++ PQV
Sbjct: 63 ACASLVVLSYPELKVVYEDSRMVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
++VDGNG+LH RGFG+A H+GVL L IGV K L VDGL ++ + + D
Sbjct: 123 VLVDGNGVLHQRGFGVACHLGVLTELPCIGVAKKLLQVDGLENNALHKEKIVLLQAGGDT 182
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+G SG+ G+A+RS + KP+++SVGH ISL+ AV + C++R+PEPIRQADIR
Sbjct: 183 FPLIGSSGTVLGMALRSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIR 242
Query: 292 SRDYLQK 298
SR+Y+++
Sbjct: 243 SREYIRR 249
>gi|395533283|ref|XP_003768690.1| PREDICTED: endonuclease V [Sarcophilus harrisii]
Length = 300
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/260 (41%), Positives = 159/260 (61%), Gaps = 14/260 (5%)
Query: 39 EALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIG 98
EAL P + L++W Q LK +I D W ++ + L +G
Sbjct: 4 EALGYP---LRETLSRWEREQARLKTSVIDWDTEAWQ-----------RDSDFAGLHRVG 49
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD+SF K D AC +VVL L++++E+ ++ L PYV GFLAFRE P L+ +
Sbjct: 50 GVDISFIKGDDIRACASLVVLSYPELEVLFEECRMVNLTAPYVSGFLAFREVPFLVDAIQ 109
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVR 218
++K+ + PQVL+VDGNG+LH RGFG+A HIG+L NL IGV K L VDGL ++ +
Sbjct: 110 RLQKKNHSLMPQVLLVDGNGILHHRGFGVACHIGILTNLPCIGVAKKLLQVDGLKNNDLH 169
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK 278
+ + D PL+ SG+ G+A++S + KP+++SVGH +SL TAV +++ CK
Sbjct: 170 KQKIQQLKLGGDTFPLVADSGTILGMALKSHNKSTKPLYVSVGHKVSLGTAVRLIQACCK 229
Query: 279 YRVPEPIRQADIRSRDYLQK 298
YR+PEPIRQADIRSR+Y+++
Sbjct: 230 YRIPEPIRQADIRSREYIRR 249
>gi|311266665|ref|XP_003131183.1| PREDICTED: endonuclease V-like [Sus scrofa]
gi|311266671|ref|XP_003131184.1| PREDICTED: endonuclease V-like [Sus scrofa]
Length = 292
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK ++ D W + + L+ +GGVD+SF K+D
Sbjct: 14 LSLWKREQARLKALVVDRDTEAWQRDPAFSG-----------LQRVGGVDVSFVKDDSVS 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL+ L++VYED ++ L PYV G+LAFRE P L+ + ++++ PQV
Sbjct: 63 ACASLVVLNYPELEVVYEDCRMVSLTAPYVSGYLAFREVPFLVDAVQRLQEKDPQLMPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L VDGNG+LH RGFG+A H+GVL ++ IGV K L VDGL + + D
Sbjct: 123 LFVDGNGVLHHRGFGVACHLGVLTDVPCIGVAKKLLQVDGLENDAAHREKIRLLKAGGDS 182
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PLMGGSG+ G+A++S + KP+++SVGH +SL+TAV + C++R+PEP+RQADIR
Sbjct: 183 FPLMGGSGAVLGMALKSHDHSTKPLYVSVGHKMSLETAVRLTHSCCRFRIPEPVRQADIR 242
Query: 292 SRDYLQK 298
SRDY+++
Sbjct: 243 SRDYIRR 249
>gi|56556564|gb|AAH87745.1| LOC496630 protein, partial [Xenopus (Silurana) tropicalis]
Length = 261
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 158/255 (61%), Gaps = 21/255 (8%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L +W Q L++ LIT + W + + L+ IGGVD+S+ KED ++
Sbjct: 20 LLRWEREQMLLRENLITCNTEAWQ-----------SHPDFLGLQRIGGVDLSYIKEDDTV 68
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L+++YED L+ + VPYV G+LAFRE PVL+ + + ++ PQV
Sbjct: 69 ACASLVVLSYPELKVIYEDCHLVTINVPYVAGYLAFREVPVLVDAVQKLLEKDPCLMPQV 128
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE-- 229
L VDGNG+LH RGFG+A H+G+L +L IGV KNL VDG+ ++ D KE E
Sbjct: 129 LFVDGNGILHHRGFGVACHLGILTDLPCIGVAKNLLQVDGIENND-----DHKEQIRELQ 183
Query: 230 ---DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIR 286
D L G SG+ G A++S + KP++ISVGH ISL+TAV +V C+YRVPEP R
Sbjct: 184 SGGDFFNLTGSSGAILGAALKSCSKSSKPVYISVGHKISLETAVRLVHSCCQYRVPEPTR 243
Query: 287 QADIRSRDYLQKHQS 301
QADIRSR++L K++S
Sbjct: 244 QADIRSREFLCKNRS 258
>gi|159156019|gb|AAI54887.1| LOC496630 protein [Xenopus (Silurana) tropicalis]
Length = 263
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 158/255 (61%), Gaps = 21/255 (8%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L +W Q L++ LIT + W + + L+ IGGVD+S+ KED ++
Sbjct: 22 LLRWEREQMLLRENLITCNTEAWQ-----------SHPDFLGLQRIGGVDLSYIKEDDTV 70
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L+++YED L+ + VPYV G+LAFRE PVL+ + + ++ PQV
Sbjct: 71 ACASLVVLSYPELKVIYEDCHLVTINVPYVAGYLAFREVPVLVDAVQKLLEKDPCLMPQV 130
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE-- 229
L VDGNG+LH RGFG+A H+G+L +L IGV KNL VDG+ ++ D KE E
Sbjct: 131 LFVDGNGILHHRGFGVACHLGILTDLPCIGVAKNLLQVDGIENND-----DHKEQIRELQ 185
Query: 230 ---DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIR 286
D L G SG+ G A++S + KP++ISVGH ISL+TAV +V C+YRVPEP R
Sbjct: 186 SGGDFFNLTGSSGAILGAALKSCSKSSKPVYISVGHKISLETAVRLVHSCCQYRVPEPTR 245
Query: 287 QADIRSRDYLQKHQS 301
QADIRSR++L K++S
Sbjct: 246 QADIRSREFLCKNRS 260
>gi|326930840|ref|XP_003211547.1| PREDICTED: putative endonuclease FLJ39025-like, partial [Meleagris
gallopavo]
Length = 242
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 137/208 (65%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ +GGVD+S+ + + AC +VVL L+++YED ++ + PYV GFLAFRE P ++
Sbjct: 1 RRVGGVDLSYGRGNDGSACVSLVVLSYPGLEVLYEDCRMVAVSAPYVAGFLAFREVPFMV 60
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ +++ PQVL+VDGNGLLH RGFG+A H+GVL +L +GV KNL HVDGL
Sbjct: 61 EAVQRLQREQPELRPQVLLVDGNGLLHQRGFGVACHLGVLTDLPCVGVAKNLLHVDGLAK 120
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
+ + D PLMG SG+ G+A+R + KP++ISVGH I L+TAV +VK
Sbjct: 121 DELHKEQIRSLQKKGDTFPLMGTSGAVLGMALRGCNSSSKPLYISVGHRICLETAVHLVK 180
Query: 275 MTCKYRVPEPIRQADIRSRDYLQKHQST 302
CKYR+PEPIRQADIRSR Y+QK +
Sbjct: 181 SCCKYRIPEPIRQADIRSRAYIQKQMCS 208
>gi|440895503|gb|ELR47669.1| hypothetical protein M91_17088, partial [Bos grunniens mutus]
Length = 292
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/265 (43%), Positives = 154/265 (58%), Gaps = 31/265 (11%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L W Q LK R++ D W + + L+ +GGVD+SF K+D
Sbjct: 14 LLDWKREQASLKARVVDRDTEAWQRDPAFSG-----------LQRVGGVDVSFVKDDSGS 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ- 170
AC +VVL L+++YED ++ L PYV GFLAFRE P L+ + +++R PQ
Sbjct: 63 ACASLVVLSYPELEVLYEDCRMVTLTAPYVSGFLAFRELPFLVDAVQQLRQREPRLMPQA 122
Query: 171 -----------VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVR- 218
VL VDGNG+LH RGFG+A H+GVL +L IGV K L VDGL ++ +
Sbjct: 123 TDYDFPLWLFQVLFVDGNGVLHHRGFGVACHLGVLTDLPCIGVAKKLLQVDGLENNALHK 182
Query: 219 ---QLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
QLL A D PLMGGSG+ G A+RS + KP+++SVGH ISL+ AV +
Sbjct: 183 EKIQLLKA----GGDSFPLMGGSGTVLGRALRSHDHSTKPLYVSVGHKISLEAAVRLTHS 238
Query: 276 TCKYRVPEPIRQADIRSRDYLQKHQ 300
CK+R+PEP+RQADIRSRDY+++ Q
Sbjct: 239 CCKFRIPEPVRQADIRSRDYIRRTQ 263
>gi|301772842|ref|XP_002921845.1| PREDICTED: putative endonuclease FLJ39025-like [Ailuropoda
melanoleuca]
Length = 330
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 152/247 (61%), Gaps = 11/247 (4%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK ++ D W ++ + L+ +GGVD+SF K D
Sbjct: 14 LSLWKREQARLKALVVDRDTEAWQ-----------RDAAFLGLQRVGGVDVSFVKGDSIS 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L++VYED ++ L PYV GFLAFRE P L+ + ++++ PQV
Sbjct: 63 ACASLVVLSYPELEVVYEDCCMVSLTAPYVSGFLAFREVPFLVDAVRRLREKEPRLVPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH +GFG+A H+GVL +L IGV K L VDGL ++ + D
Sbjct: 123 LLVDGNGVLHHQGFGVACHLGVLTDLPCIGVAKKLLQVDGLENNARHKEKIRLLRAGGDS 182
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+GGSG+ G+A++S + KP+++SVGH ISL+ AV + + C++RVPEP+RQADIR
Sbjct: 183 FPLIGGSGTVLGMALKSHDHSSKPLYVSVGHKISLEAAVRLTQGCCRFRVPEPVRQADIR 242
Query: 292 SRDYLQK 298
SRDY+++
Sbjct: 243 SRDYIRR 249
>gi|410981986|ref|XP_003997345.1| PREDICTED: uncharacterized protein LOC101095453 [Felis catus]
Length = 639
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 106/246 (43%), Positives = 153/246 (62%), Gaps = 12/246 (4%)
Query: 54 QWTEI-QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
+W + Q +LK ++ D W ++ L+ +GGVD+SF K D A
Sbjct: 54 RWPPVEQAQLKALVVDRDTEAWQ-----------RDPGFSGLQRVGGVDVSFVKGDSVSA 102
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
C +VVL L++VYED ++ L+ PYV GFLAFRE P L++ + ++++ PQVL
Sbjct: 103 CASLVVLSYPELEVVYEDCRMVSLKAPYVSGFLAFREVPFLVAAVRRLREKEPGLVPQVL 162
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
+VDGNGLLH RGFG+A H+GVL +L IGV K L VDGL ++ + D
Sbjct: 163 LVDGNGLLHHRGFGVACHLGVLTDLPCIGVAKKLLQVDGLENNTQHKEKIGLLRAGGDSF 222
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRS 292
PL GGSG+ G+A+RS + KP+++SVGH ISL+ AV + + C++R+PEP+RQADIRS
Sbjct: 223 PLTGGSGTVLGMALRSHDHSTKPLYVSVGHKISLEAAVRLTRGCCRFRIPEPVRQADIRS 282
Query: 293 RDYLQK 298
RDY+++
Sbjct: 283 RDYIRR 288
>gi|338711279|ref|XP_001490193.2| PREDICTED: putative endonuclease FLJ39025-like [Equus caballus]
Length = 338
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 151/244 (61%), Gaps = 19/244 (7%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
Q LK R++ D W + + L+ +GGVD+SF K D AC +VV
Sbjct: 50 QARLKARVVDRDTEAWQRDPAFSG-----------LQRVGGVDVSFVKGDSVSACASLVV 98
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
L L++VYED ++ L PYV GFLAFRE P L+ + ++++ PQVL+VDGNG
Sbjct: 99 LSYPELEVVYEDCRMVSLTAPYVSGFLAFREVPFLVDAVRRLREKEPCLMPQVLLVDGNG 158
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL----THSGVRQLLDAKENNNEDIIPL 234
+LH RGFG+A H+GVL +L +GV K L VDGL H QLL A+ D PL
Sbjct: 159 VLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNAQHKEKIQLLQAR----GDSFPL 214
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRD 294
MGGSG+ G+A++S + KP+++SVGH +SL+ A+ + C++R+PEP+RQADIRSRD
Sbjct: 215 MGGSGTILGMALKSHDHSTKPLYVSVGHKMSLEAAMRLTLGCCRFRIPEPVRQADIRSRD 274
Query: 295 YLQK 298
Y+++
Sbjct: 275 YIRR 278
>gi|149054978|gb|EDM06795.1| rCG35491, isoform CRA_b [Rattus norvegicus]
Length = 334
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK R++ D W S + L+ +GGVD+SF K D
Sbjct: 14 LSLWKGEQARLKARVVDRDTEAWQRDPSFSG-----------LQKVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L+++YED ++ L+ PYV GFLAFRE P L+ L+ ++++ PQV
Sbjct: 63 ACASLVVLSYPELKVLYEDSRMVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH RGFG+A H+GVL L +GV K L V+GL ++ + D
Sbjct: 123 LLVDGNGVLHQRGFGVACHLGVLTELPCVGVAKKLLQVEGLENNASHKEKIVLLQAGGDT 182
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+G SG+ G+A++S + KP+++SVGH ISL+ AV + C++R+PEPIRQADIR
Sbjct: 183 FPLIGNSGTVLGMALKSHDHSTKPLYVSVGHRISLEVAVRLTHRCCRFRIPEPIRQADIR 242
Query: 292 SRDYLQK 298
SR+Y+++
Sbjct: 243 SREYIRR 249
>gi|426346454|ref|XP_004040893.1| PREDICTED: endonuclease V isoform 2 [Gorilla gorilla gorilla]
Length = 282
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 105/259 (40%), Positives = 156/259 (60%), Gaps = 11/259 (4%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D TW + + L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTETWQRDPAFSG-----------LQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQ 110
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
++++ PQVL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 111 LREKEPGLMPQVLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 170
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + + C++
Sbjct: 171 EKIRLLQTQGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTRCCCRF 230
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 231 RIPEPVRQADICSREHIRK 249
>gi|348558262|ref|XP_003464937.1| PREDICTED: endonuclease V-like [Cavia porcellus]
Length = 316
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 149/244 (61%), Gaps = 11/244 (4%)
Query: 55 WTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACG 114
W Q LK L+ D W ++ + L+ +GGVD+SF K D AC
Sbjct: 17 WKREQARLKALLVDRDTEAWQ-----------QDPDFSGLQRVGGVDVSFVKGDSVTACA 65
Query: 115 CIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMV 174
+VVL L++VYED ++ L PYV GFLAFREAP L+ + ++++ PQVL+V
Sbjct: 66 SLVVLSYPELEVVYEDSRVISLTAPYVSGFLAFREAPFLVDAVHRLQEKEPSLMPQVLLV 125
Query: 175 DGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPL 234
DGNG+LH +GFG+A H+GVL L IGV K L V GL ++ V + D PL
Sbjct: 126 DGNGVLHHQGFGVACHLGVLTGLPCIGVAKKLLQVKGLENNPVHKEKIRLLQAGGDTFPL 185
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRD 294
MG SG+ G+A++S + KP++ISVGH +SL+ AV + + C++R+PEP+RQADIRSR+
Sbjct: 186 MGSSGTVLGMALKSHDHSTKPVYISVGHKMSLEAAVRLTRRCCRFRIPEPVRQADIRSRE 245
Query: 295 YLQK 298
Y+++
Sbjct: 246 YIRR 249
>gi|260819972|ref|XP_002605309.1| hypothetical protein BRAFLDRAFT_89049 [Branchiostoma floridae]
gi|229290642|gb|EEN61319.1| hypothetical protein BRAFLDRAFT_89049 [Branchiostoma floridae]
Length = 250
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 154/248 (62%), Gaps = 8/248 (3%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
+QW + Q LK++L+ +D W + TT LKY+ G+D+S++KE A
Sbjct: 3 DQWRKEQVLLKEKLLEQDTEEWQHADDDTTLFHG-------LKYVAGLDLSYTKESSENA 55
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
C +VV+ L +VY D + +++ PYVPGFL RE + +++ +++ A+ + PQVL
Sbjct: 56 CASLVVMSYPDLTVVYSDCTPVQVTAPYVPGFLCAREVGFHVQMVERLRQSASEYMPQVL 115
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-LHHVDGLTHSGVRQLLDAKENNNEDI 231
+VDGNG+LHP GFG+A H+GVL +L TIGV KN DG+T R + + D
Sbjct: 116 LVDGNGMLHPSGFGIACHLGVLTDLPTIGVAKNPFTGFDGMTKENHRTVSAEQLKKGGDS 175
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
++G SG +G A+ S P+++SVGH ++LDTAV +V C+YR+PEPIRQADIR
Sbjct: 176 FLVVGTSGKVYGRALLSKDGITSPVYVSVGHRVTLDTAVKLVYACCQYRIPEPIRQADIR 235
Query: 292 SRDYLQKH 299
SR+Y+++H
Sbjct: 236 SREYIRQH 243
>gi|196000436|ref|XP_002110086.1| hypothetical protein TRIADDRAFT_53685 [Trichoplax adhaerens]
gi|190588210|gb|EDV28252.1| hypothetical protein TRIADDRAFT_53685 [Trichoplax adhaerens]
Length = 270
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 150/244 (61%), Gaps = 6/244 (2%)
Query: 55 WTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACG 114
W Q+ELKK LIT + +W N+ N S L YIGG+D S+SK +P AC
Sbjct: 20 WIRQQNELKKSLITNNQVSWLPANNNDNNVSLHG-----LHYIGGIDQSYSKSNPFYACA 74
Query: 115 CIVVLDLQTLQIVYEDYS-LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
+VVL +++VY +YS ++ + PY+PGFLAFRE L ++ +++ PQV++
Sbjct: 75 SLVVLKFPEMELVYSNYSGIVHVNQPYIPGFLAFREFEHLSYCINKLRQEQPSLLPQVIL 134
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG+LH + FG A H+GVLA++ TIGV KNL V G+ A+ + D P
Sbjct: 135 VDGNGILHHQEFGSACHLGVLADIPTIGVAKNLLEVHGIARDSKHMDQIAQLSTKGDSFP 194
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
L SG G+A+RS+ + +PI++SVGH + L TA IV +CKYR+PEPIRQAD SR
Sbjct: 195 LTNRSGVILGMALRSSEQSTRPIYVSVGHRLDLKTATKIVLASCKYRLPEPIRQADHLSR 254
Query: 294 DYLQ 297
+YL+
Sbjct: 255 EYLR 258
>gi|355754443|gb|EHH58408.1| hypothetical protein EGM_08253 [Macaca fascicularis]
Length = 260
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK R++ D W + + L+ +GGVD+SF K D
Sbjct: 14 LSLWKREQARLKARVVDRDTEAWQRDPAFSG-----------LRRVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+ ++++ PQV
Sbjct: 63 ACASLVVLSYPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLREKEPGLMPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + + D
Sbjct: 123 LLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDS 182
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++R+PEP+RQADI
Sbjct: 183 FPLLGDSGTVLGMALRSHDRSTRPLYISVGHKMSLEAAVRLTCCCCRFRIPEPVRQADIC 242
Query: 292 SRDYLQK 298
SR++++K
Sbjct: 243 SREHIRK 249
>gi|301120149|ref|XP_002907802.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106314|gb|EEY64366.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 222
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 131/204 (64%), Gaps = 9/204 (4%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+I GVD+SF K AC +VVLD L ++YE ++ + L PY+ GFLAFRE P L
Sbjct: 6 SFIAGVDISFLKGSDEHACASVVVLDFPALTVLYEAFTYVSLPAPYIAGFLAFREVPALT 65
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L D++++R P V +VDGNG+LHP+GFGLASH GVL N++TIGVGK HVDGLT
Sbjct: 66 KLYDDLRRRRPELLPDVTLVDGNGVLHPQGFGLASHFGVLENISTIGVGKTFLHVDGLTK 125
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
V+ L+ + D++ WG A+ T P+++SVGH +SLD +V I +
Sbjct: 126 PDVKALMAKAREDGSDLV---------WGAALCGTTGVKNPVYVSVGHMLSLDASVAIAQ 176
Query: 275 MTCKYRVPEPIRQADIRSRDYLQK 298
+YRVPEPIRQAD+RSR+ ++K
Sbjct: 177 ACSQYRVPEPIRQADLRSREVIRK 200
>gi|355568995|gb|EHH25276.1| hypothetical protein EGK_09070 [Macaca mulatta]
Length = 260
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK R++ D W + + L+ +GGVD+SF K D
Sbjct: 14 LSLWKREQARLKARVVDRDTEAWQRDPAFSG-----------LRRVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+ ++++ PQV
Sbjct: 63 ACASLVVLSYPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLREKEPGLMPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH RGFG+A H+G+L +L +GV K L VDGL ++ + + D
Sbjct: 123 LLVDGNGVLHHRGFGVACHLGILTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDS 182
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++R+PEP+RQADI
Sbjct: 183 FPLLGDSGTVLGMALRSHDRSTRPLYISVGHKMSLEAAVRLTCCCCRFRIPEPVRQADIC 242
Query: 292 SRDYLQK 298
SR++++K
Sbjct: 243 SREHIRK 249
>gi|410218944|gb|JAA06691.1| hypothetical protein FLJ35220 [Pan troglodytes]
Length = 309
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 154/259 (59%), Gaps = 11/259 (4%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W + + L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQRDPAFSG-----------LQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQ 110
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
++++ PQVL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 111 LREKEPGLMPQVLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 170
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 171 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 230
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 231 RIPEPVRQADISSREHIRK 249
>gi|403280411|ref|XP_003931712.1| PREDICTED: endonuclease V isoform 2 [Saimiri boliviensis
boliviensis]
Length = 303
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 152/251 (60%), Gaps = 11/251 (4%)
Query: 48 AQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKE 107
++ L+ W Q LK R++ D W + + L+ +GGVD+SF K
Sbjct: 10 SEETLSLWKREQARLKARVVDRDTEAWQRDPAFSG-----------LRRVGGVDVSFVKG 58
Query: 108 DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHF 167
D AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+ ++++
Sbjct: 59 DSVRACASLVVLSYPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLREKEPDL 118
Query: 168 YPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENN 227
PQVL+VDGNG+LH +GFG+A H+GVL +L +GV K L VDGL + + +
Sbjct: 119 MPQVLLVDGNGVLHHQGFGMACHLGVLTDLPCVGVAKKLLQVDGLENDALHKEKIRLLQA 178
Query: 228 NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQ 287
D PL+GGSG+ G+A++S + +P+++SVGH +SL+ AV + CK+R+PEP+RQ
Sbjct: 179 GGDSFPLLGGSGTVLGMALKSHDRSTRPLYVSVGHKMSLEAAVRLTCCCCKFRIPEPVRQ 238
Query: 288 ADIRSRDYLQK 298
AD SR++++K
Sbjct: 239 ADFCSREHIRK 249
>gi|397522252|ref|XP_003831191.1| PREDICTED: endonuclease V isoform 2 [Pan paniscus]
Length = 309
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 154/259 (59%), Gaps = 11/259 (4%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W + + L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQRDPAFSG-----------LQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLTFPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQ 110
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
++++ PQVL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 111 LREKEPGLMPQVLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 170
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 171 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 230
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 231 RIPEPVRQADISSREHIRK 249
>gi|31542775|ref|NP_775898.2| endonuclease V isoform 1 [Homo sapiens]
gi|74729504|sp|Q8N8Q3.1|ENDOV_HUMAN RecName: Full=Endonuclease V
gi|21755816|dbj|BAC04765.1| unnamed protein product [Homo sapiens]
gi|94717598|gb|ABF47100.1| hypothetical protein FLJ35220 [Homo sapiens]
gi|119610011|gb|EAW89605.1| hypothetical protein FLJ35220, isoform CRA_d [Homo sapiens]
Length = 282
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/259 (40%), Positives = 154/259 (59%), Gaps = 11/259 (4%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W + + L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQRDPAFSG-----------LQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQ 110
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
++++ PQVL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 111 LREKEPGLMPQVLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 170
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 171 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 230
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 231 RIPEPVRQADICSREHIRK 249
>gi|402901299|ref|XP_003913588.1| PREDICTED: endonuclease V isoform 2 [Papio anubis]
Length = 308
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 151/247 (61%), Gaps = 11/247 (4%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q +LK R++ D W + + L+ +GGVD+SF K D
Sbjct: 14 LSLWKREQAQLKSRIVDRDTEAWQRDPAFSG-----------LRRVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+ ++++ PQV
Sbjct: 63 ACASLVVLSYPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLREKEPGLMPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + + D
Sbjct: 123 LLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDS 182
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++ +PEP+RQADI
Sbjct: 183 FPLLGDSGTVLGMALRSHDRSTRPLYISVGHKMSLEAAVRLTCCCCRFWIPEPVRQADIC 242
Query: 292 SRDYLQK 298
SR++++K
Sbjct: 243 SREHIRK 249
>gi|119610018|gb|EAW89612.1| hypothetical protein FLJ35220, isoform CRA_j [Homo sapiens]
Length = 306
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 150/247 (60%), Gaps = 11/247 (4%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK ++ D W + + L+ +GGVD+SF K D
Sbjct: 11 LSLWKREQARLKAHVVDRDTEAWQRDPAFSG-----------LQRVGGVDVSFVKGDSVR 59
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+ ++++ PQV
Sbjct: 60 ACASLVVLSFPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLREKEPGLMPQV 119
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + + D
Sbjct: 120 LLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDS 179
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++R+PEP+RQADI
Sbjct: 180 FPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRFRIPEPVRQADIC 239
Query: 292 SRDYLQK 298
SR++++K
Sbjct: 240 SREHIRK 246
>gi|441643519|ref|XP_004090521.1| PREDICTED: endonuclease V [Nomascus leucogenys]
Length = 309
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/259 (39%), Positives = 154/259 (59%), Gaps = 11/259 (4%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W + + L+ +GG
Sbjct: 2 ALEASGGPPEETLSLWKREQARLKAHVVDRDTEAWQRDPAFSG-----------LQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQ 110
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
++++ PQVL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 111 LREKEPGLMPQVLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 170
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P+++SVGH +SL+ AV + C++
Sbjct: 171 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYVSVGHKMSLEAAVRLTCCCCRF 230
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 231 RIPEPVRQADICSREHIRK 249
>gi|118370075|ref|XP_001018240.1| Endonuclease V family protein [Tetrahymena thermophila]
gi|89300007|gb|EAR97995.1| Endonuclease V family protein [Tetrahymena thermophila SB210]
Length = 379
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/277 (40%), Positives = 160/277 (57%), Gaps = 20/277 (7%)
Query: 27 RSYMENYCEEEREAL----ASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNL-PNSTT 81
+ MEN ++++++ A DP +W Q ++ + ED F W L P S
Sbjct: 70 KQQMENIEDQDKKSFHELRAQIDPEV---YEKWDCEQIYVRGLITEEDTFEWKLDPKS-- 124
Query: 82 TNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYV 141
E LKYIGGVD+SFS++ IA +VV++ +L+ V+E++ +++L PY+
Sbjct: 125 ---------EKALKYIGGVDISFSQKHQDIAVAILVVIEYPSLKKVHEEFEIVKLDGPYI 175
Query: 142 PGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIG 201
PGFLAFREA L+ L ++ F PQV+MVDGNG+LH GLASH+GVL + TIG
Sbjct: 176 PGFLAFREAAHLVKLFKKLQINKPQFTPQVIMVDGNGILHQNACGLASHLGVLIDKPTIG 235
Query: 202 VGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVG 261
VGK + VDGL V K + L G SG WG A +S D + PI +SVG
Sbjct: 236 VGKTIFFVDGLRKDIVLDKF-KKVTDEGGFAILQGDSGRIWGAAYKSKKDVVDPIIVSVG 294
Query: 262 HCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
H ISL +A+ ++ C +R+PEP+R ADIRSR+ ++K
Sbjct: 295 HKISLQSALDLISKCCNFRIPEPVRVADIRSRELVKK 331
>gi|167520993|ref|XP_001744835.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776449|gb|EDQ90068.1| predicted protein [Monosiga brevicollis MX1]
Length = 256
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 152/257 (59%), Gaps = 16/257 (6%)
Query: 47 AAQAQLNQWTEIQDELKKRLITEDFFT-WNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
A +QL W + QD LKKR++ D W L + LK +GGVD+SF
Sbjct: 14 AELSQLRHWEQEQDTLKKRMVERDQHNEWTLES---------------LKRVGGVDISFI 58
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
K D AC +VVL LQ+++E+ +++L PY+PGFLAFRE L++L+ ++
Sbjct: 59 KGDNINACATLVVLSYPDLQVLHEESMMVQLTAPYIPGFLAFREVDHLVTLVRRLEASRP 118
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE 225
PQ++MVDGNG LH RGFGLA H+GVL +L T+G+GKN+ VD L A+
Sbjct: 119 DLMPQLIMVDGNGKLHYRGFGLACHLGVLLDLPTVGIGKNILVVDNLDKESFHAKERAEL 178
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPI 285
+ D IP++G S + WG A+R + P+++SVGH +SLDTA+ + T K+++PE +
Sbjct: 179 QHRGDWIPVVGASQTVWGAAVRCVEAAINPVYVSVGHRVSLDTAIKLALATAKHKIPEAV 238
Query: 286 RQADIRSRDYLQKHQST 302
R AD SR +L+K T
Sbjct: 239 RMADQLSRLFLRKRAGT 255
>gi|291416426|ref|XP_002724448.1| PREDICTED: hypothetical protein, partial [Oryctolagus cuniculus]
Length = 238
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 143/237 (60%), Gaps = 19/237 (8%)
Query: 55 WTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACG 114
W Q L+ R++ D W + L+ +GG D+SF K D + AC
Sbjct: 17 WKREQARLRARVVDRDTEAWQRDPGFSG-----------LRRVGGADVSFVKGDSASACA 65
Query: 115 CIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMV 174
+VVL LQ+VYE+ ++RL PYV GFLAFREAP L+ + ++++ PQVL+V
Sbjct: 66 SLVVLSFPELQVVYEESRMVRLTAPYVSGFLAFREAPFLVDAVQRLREKQPDLMPQVLLV 125
Query: 175 DGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL----THSGVRQLLDAKENNNED 230
DGNG+LH +GFG+A H+GVL +L IGV K L VDGL H QLL A +
Sbjct: 126 DGNGVLHHQGFGVACHLGVLTDLPCIGVAKKLLQVDGLEKDAAHKEQIQLLQA----GGE 181
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQ 287
PL+GGSG+ G+A+RS + KP+++SVGH +SL+TAV + + C++RVPEP+RQ
Sbjct: 182 AFPLIGGSGTVLGMALRSHDRSTKPVYVSVGHKVSLETAVRLTRHCCRFRVPEPVRQ 238
>gi|443710423|gb|ELU04676.1| hypothetical protein CAPTEDRAFT_222948 [Capitella teleta]
Length = 310
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 152/275 (55%), Gaps = 32/275 (11%)
Query: 55 WTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACG 114
W + Q ELK +LI D W + N+ + + LK++GGVD+SF K D AC
Sbjct: 35 WEKQQAELKNQLILYDVDEWAKLRLSGNNS---QGDSRPLKFVGGVDISFVKGDKYNACA 91
Query: 115 CIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMV 174
VVL L +VY+D S++ L PY+PGFLAFREA L++ + +K+ PQV++V
Sbjct: 92 AFVVLSYPDLNVVYQDLSMVHLTAPYIPGFLAFREADFLVNKVKKLKRSNPELMPQVIVV 151
Query: 175 DGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT--------------------- 213
DGNG LHPRG GLA H+GV +L TIG KNL+ VDGL
Sbjct: 152 DGNGTLHPRGVGLACHLGVELDLPTIGAAKNLYCVDGLKRDEKHFKQCSQWKAFTTGHSS 211
Query: 214 --------HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
HS A D PL+G S GVA+++ D PIF+S GH IS
Sbjct: 212 GYDVNSERHSITMATHIATLKKPGDSFPLIGQSEIQLGVALKTCQDAKNPIFVSPGHKIS 271
Query: 266 LDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
++T+ +V++T KYRVPEP RQAD SR+YL+K++
Sbjct: 272 METSAWVVQLTSKYRVPEPTRQADQLSREYLRKNR 306
>gi|449478764|ref|XP_002192432.2| PREDICTED: endonuclease V [Taeniopygia guttata]
Length = 349
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/238 (44%), Positives = 149/238 (62%), Gaps = 15/238 (6%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDL 121
L+ L+ ED W K+ + L+ +GGVD+S+ K D S AC +VVL
Sbjct: 108 LRTGLLEEDTEPWQ-----------KDPQFSGLQRVGGVDLSYIKGDESRACASLVVLSY 156
Query: 122 QTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLH 181
L+++Y+D ++ + PYV GFLAFRE PVL+ + +++ PQVL+VDGNGLLH
Sbjct: 157 PALEVLYQDCRMVPVTAPYVAGFLAFREVPVLVEAVQRLQQEEPQLQPQVLLVDGNGLLH 216
Query: 182 PRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGST 241
PRGFG+A H+GVL +L IGV KNL HVDGL + + + + +PL G SG
Sbjct: 217 PRGFGIACHLGVLTDLPCIGVAKNLLHVDGLARDELHREQVRSLQRSGETLPLTGTSGKV 276
Query: 242 WGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKH 299
G+ S+ +P+++SVGH +SL TAV +V+ C++RVPEPIRQADIRSR+YL+K
Sbjct: 277 LGMCSNSS----RPLYVSVGHRVSLGTAVRMVRACCRFRVPEPIRQADIRSREYLRKQ 330
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
Q L+ L+ ED W K+ + L +GGVD+S+ K D S AC +VV
Sbjct: 5 QARLRTGLLEEDTEPWQ-----------KDPQFSGLHRVGGVDLSYIKGDESRACASLVV 53
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
L L+++Y+D ++ + PYV GFLAFRE PVL+
Sbjct: 54 LSYPALEVLYQDCRMVPVTAPYVAGFLAFREVPVLV 89
>gi|47204508|emb|CAF95813.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 144/254 (56%), Gaps = 14/254 (5%)
Query: 42 ASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVD 101
ASP ++ L QW QD L++RL+ ED W + + L+ + GVD
Sbjct: 3 ASP---SEELLKQWESEQDRLRQRLLEEDTEAWQRDRNFSG-----------LERVAGVD 48
Query: 102 MSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMK 161
+S+ K D AC +VVL L++VYED ++ L PY+ GFLAFRE+ LL L ++
Sbjct: 49 LSYIKGDHVNACAQLVVLSYPQLEVVYEDSQMVALTAPYLAGFLAFRESSALLERLQRLE 108
Query: 162 KRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLL 221
H PQV+ VDGNGLLH R FGLA H+GVL+ L +GV KNL V G+ +
Sbjct: 109 HNQPHLLPQVVFVDGNGLLHHREFGLACHLGVLSGLPCVGVAKNLLQVQGVHKGEEHRAQ 168
Query: 222 DAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRV 281
A D PL SG G A+RS+ ++ KP+++SVGH IS+DTAV + C+YRV
Sbjct: 169 VAALKKAGDSFPLTAASGRVLGKALRSSDNSSKPVYVSVGHKISVDTAVRLTHSCCRYRV 228
Query: 282 PEPIRQADIRSRDY 295
PEPIRQ +R +
Sbjct: 229 PEPIRQVHTHTRTH 242
>gi|405952321|gb|EKC20146.1| hypothetical protein CGI_10006702 [Crassostrea gigas]
Length = 549
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 153/265 (57%), Gaps = 21/265 (7%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
DPA +W Q ELKK++ ED +S + + + Y+GG+D+SF
Sbjct: 45 DPALLEIKRKWELEQKELKKKISLED-------DSNVKKMISNPDSDTF--YVGGMDISF 95
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
K D AC +VV L++VYEDY +++L PY+PGFLAFRE ++ L +N+K+
Sbjct: 96 VKGDDVNACAALVVFSFPDLEVVYEDYQMIQLTQPYIPGFLAFREMDFMIQLYNNVKENN 155
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG---LTHSGVRQLL 221
+ PQV+MVDGNG+LHPRG G A H+GVL ++ +GV KNL H++ + Q+
Sbjct: 156 TQYTPQVIMVDGNGILHPRGVGSACHLGVLLDVPCLGVAKNLFHIENDIDRNEEHMEQIA 215
Query: 222 DAKENNNEDIIPLMG-GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYR 280
K++ D PL+G SG T+G A++S KP+++S GH IS+D+A +V KYR
Sbjct: 216 SLKQSG--DTFPLIGSSSGITYGKALKSCEKATKPVYVSPGHKISIDSATELVHRCSKYR 273
Query: 281 VPEPIRQA------DIRSRDYLQKH 299
VPEPIRQ + + + LQ H
Sbjct: 274 VPEPIRQCPNDRTEETKRKKRLQHH 298
>gi|449275054|gb|EMC84039.1| hypothetical protein A306_07694, partial [Columba livia]
Length = 190
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 126/190 (66%)
Query: 98 GGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GGVD+S+ K D + AC +VVL LQ++YED ++ + PYV GFLAFRE PVL+ +
Sbjct: 1 GGVDLSYPKGDETRACASLVVLSFPELQVLYEDCRMVAVSTPYVAGFLAFREVPVLVEAV 60
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGV 217
+++ PQVL+VDGNGLLHPRGFG+A H+GVL L IGV KNL VDGL +
Sbjct: 61 RRLQQEEPALQPQVLLVDGNGLLHPRGFGVACHLGVLTGLPCIGVAKNLLQVDGLVKDEL 120
Query: 218 RQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC 277
+ D PL G SGS G+ +RS+ ++ +P++ISVGH + L+TAV +V+ C
Sbjct: 121 HREQIRSLRREGDTFPLTGSSGSVLGMVLRSSKNSSRPLYISVGHKVCLETAVRVVRSCC 180
Query: 278 KYRVPEPIRQ 287
+YR+PEPIRQ
Sbjct: 181 RYRIPEPIRQ 190
>gi|299472988|emb|CBN77389.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 253
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 133/214 (62%), Gaps = 8/214 (3%)
Query: 93 LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
LL+ +GGVD+SF K AC +VVL+ +LQ VYE Y + + PY+ GFLAFRE
Sbjct: 5 LLRLVGGVDISFVKGSEENACASLVVLEFPSLQTVYEAYERVTMNHPYISGFLAFREVDH 64
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
L L+ +++ P V+ VDGNG LHPRG GLA H+GV+ L T+G+GK VDGL
Sbjct: 65 LARLVGQLRRERPDLEPDVVFVDGNGRLHPRGAGLACHLGVVTGLRTVGLGKTFLQVDGL 124
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAM--------RSTPDTLKPIFISVGHCI 264
T GVR+ + A + E PL+G SG+ WG A + P+F+S+GH +
Sbjct: 125 TKVGVRERVKALLSAGERETPLLGTSGTVWGTAFVPKEEEGKKGGGVVTSPVFVSIGHRV 184
Query: 265 SLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
SL+T V + K C++RVPEPIRQAD+RSR+ +++
Sbjct: 185 SLETCVALTKAVCRFRVPEPIRQADMRSREVIRE 218
>gi|348521082|ref|XP_003448055.1| PREDICTED: endonuclease V-like [Oreochromis niloticus]
Length = 333
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 124/198 (62%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ +GGVD+SF K D AC +VVL LQ++YED ++ L PY+ GFLAFRE P L
Sbjct: 46 LERVGGVDLSFIKGDDVNACAQLVVLSYPDLQVLYEDSQMVTLTAPYIAGFLAFRETPFL 105
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L +KK PQV+ VDGNGL H R FGLA H+GVL+ L +GV KNL V G+
Sbjct: 106 LEALQRLKKNQPTLLPQVVFVDGNGLFHYREFGLACHLGVLSGLPCVGVAKNLLQVQGVN 165
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
S Q A D PL+G SG G A+RS+ + KP+++SVGH ISLDTAV +
Sbjct: 166 KSEEHQSQIAALQRGGDSFPLIGASGKVLGKALRSSDKSSKPVYVSVGHKISLDTAVRLT 225
Query: 274 KMTCKYRVPEPIRQADIR 291
C+YRVPEPIRQ +R
Sbjct: 226 HACCRYRVPEPIRQVGLR 243
>gi|390463886|ref|XP_003733123.1| PREDICTED: endonuclease V [Callithrix jacchus]
Length = 306
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 150/256 (58%), Gaps = 14/256 (5%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
P ++ L+ W Q LK ++ D W + + L+ +GGVD+SF
Sbjct: 8 PLSEETLSLWKREQARLKACVVDRDTEAWQRDPAFSG-----------LRRVGGVDVSFV 56
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
K D AC +VVL L++VYE ++ L PY+ GFLAFRE P LL L+ ++++
Sbjct: 57 KGDSVRACASLVVLSYPELEVVYEKSRMVSLTAPYMSGFLAFREVPFLLELVQQLREKEP 116
Query: 166 HFYPQVLMVDGNGLLHPRG---FGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLD 222
PQVL+VDGNG+LH RG G+A H+GVL +L IGV K L VDGL + + +
Sbjct: 117 DLMPQVLLVDGNGMLHHRGNSALGVACHLGVLTDLPCIGVAKKLLQVDGLENDALHKEKI 176
Query: 223 AKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVP 282
D PL+G SG+ G+A++S + +P+++SVGH +SL+ AV + CK+R+P
Sbjct: 177 RLLQAGGDSFPLLGSSGTVLGMALKSHDRSTRPLYVSVGHKMSLEAAVRLTCCCCKFRIP 236
Query: 283 EPIRQADIRSRDYLQK 298
EP+RQADI SR++++K
Sbjct: 237 EPVRQADICSREHIRK 252
>gi|410052295|ref|XP_001161088.3| PREDICTED: endonuclease V isoform 1 [Pan troglodytes]
Length = 311
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 147/253 (58%), Gaps = 22/253 (8%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK ++ D W ++ L+ +GGVD+SF K D
Sbjct: 14 LSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+ ++++ PQV
Sbjct: 63 ACASLVVLSFPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLREKEPGLMPQV 122
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + KE +
Sbjct: 123 LLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALH-----KEKVRRGL 177
Query: 232 IPLMGGSGST------WGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPI 285
+ M GS T A+RS + +P++ISVGH +SL+ AV + C++R+PEP+
Sbjct: 178 LQAMPGSSPTGQPSPSLSQALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRFRIPEPV 237
Query: 286 RQADIRSRDYLQK 298
RQADI SR++++K
Sbjct: 238 RQADISSREHIRK 250
>gi|297273798|ref|XP_001110357.2| PREDICTED: putative endonuclease FLJ39025-like [Macaca mulatta]
Length = 282
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/196 (45%), Positives = 130/196 (66%)
Query: 103 SFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKK 162
SF K D AC +VVL L++VYE+ ++ L PYV GFLAFRE P LL L+ +++
Sbjct: 28 SFVKGDSVRACASLVVLSYPELEVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLRE 87
Query: 163 RANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLD 222
+ PQVL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 88 KEPGLMPQVLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKI 147
Query: 223 AKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVP 282
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++R+P
Sbjct: 148 RLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHKMSLEAAVRLTCCCCRFRIP 207
Query: 283 EPIRQADIRSRDYLQK 298
EP+RQADI SR++++K
Sbjct: 208 EPVRQADICSREHIRK 223
>gi|340376704|ref|XP_003386872.1| PREDICTED: endonuclease V-like [Amphimedon queenslandica]
Length = 285
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 145/261 (55%), Gaps = 19/261 (7%)
Query: 43 SPDPAAQAQLNQWTEIQDELKKRLIT---EDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
SPD A + W + Q +LK +LIT D +W NS L I G
Sbjct: 29 SPDEAGKRV--TWEKEQSKLKSQLITVDSPDVRSWRKGNSLFFG----------LHNIAG 76
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K AC +V+L L++ + ++ + PY+PGFLAFRE L+ L+
Sbjct: 77 VDISFVKGTQK-ACAMMVILTFPDLRVAHISKEIVEMTEPYIPGFLAFREVSFLMDRLEE 135
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG--- 216
+K H PQV+MVDGNG+LHPRG GLASH G+L + IGV KNL VDGL S
Sbjct: 136 IKGNNPHLMPQVIMVDGNGILHPRGLGLASHFGILCGIPCIGVAKNLFCVDGLQKSADFK 195
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ +L +K D L G SG WG A+R++ D + P+++S+GH ISL+TA +V
Sbjct: 196 EKVILISKLKKKGDSFDLKGDSGKLWGKAVRTSDDAVNPVYVSIGHKISLETATKLVIAC 255
Query: 277 CKYRVPEPIRQADIRSRDYLQ 297
R+PEP R+AD+ SR L+
Sbjct: 256 SVKRIPEPTRKADLLSRQELR 276
>gi|432843820|ref|XP_004065681.1| PREDICTED: endonuclease V-like [Oryzias latipes]
Length = 276
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/244 (40%), Positives = 136/244 (55%), Gaps = 12/244 (4%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
P + ++ W Q+ L++ L+ ED W + + L+ +GGVD+ F
Sbjct: 4 PVEEDRVRLWESEQERLRQLLVDEDTEDWQ-----------RSPDFSGLQRVGGVDLFFI 52
Query: 106 KEDPSIACGCIVVLDLQTLQ-IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
K D AC +VVL L+ ++Y D ++ L PY+ GFLAFRE P LL L +K+
Sbjct: 53 KGDGVNACAQLVVLGYPDLKKVLYRDSQMVTLTAPYIAGFLAFRETPFLLQALQRLKESQ 112
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAK 224
PQV+ VDGNGL H R FGLA H+GVL+ L +GV KNL V G+ + Q A
Sbjct: 113 PELMPQVVFVDGNGLFHYREFGLACHLGVLSGLPCVGVAKNLLQVQGVYKNQEHQSQIAA 172
Query: 225 ENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEP 284
+ D PL SG G A+RS + KP+++SVGH ISLDTAV + + C +RVPEP
Sbjct: 173 LHRGGDSFPLTAASGKVLGKALRSCDKSSKPVYVSVGHKISLDTAVRLTRACCLFRVPEP 232
Query: 285 IRQA 288
IRQ+
Sbjct: 233 IRQS 236
>gi|340501833|gb|EGR28570.1| hypothetical protein IMG5_172420 [Ichthyophthirius multifiliis]
Length = 332
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 148/250 (59%), Gaps = 23/250 (9%)
Query: 54 QWTEIQDELKKRLITEDFFTWNL-PNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
+W Q+ +++ + +D F W++ P S LKYIGGVD+SFS++ +IA
Sbjct: 25 KWDNEQNYIRQLISEKDEFDWDINPQSPKC-----------LKYIGGVDISFSQKYDNIA 73
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
+ +L+ +L+ +Y+ + +++L PY+PGFLAFREA L L + +K+ + PQV+
Sbjct: 74 VAILTILEYTSLKAIYQQHEVVKLDYPYIPGFLAFREAAHLAKLFNQLKQNKPEYTPQVV 133
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
+VDGNG+LH GLASH+GVL N+ TIG+GK + VDGL+ + V + N +D +
Sbjct: 134 LVDGNGILHQNACGLASHLGVLINIPTIGIGKTVFFVDGLSEAEVTYKFNEHCKNEKDYV 193
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT-----CKYRVPEPIRQ 287
L G SG WG A++S +T PI I LD + ++ ++R+PEP+R
Sbjct: 194 LLQGKSGRIWGAAIKSKKNTTDPI------IIQLDIKFLYNRLANQFQLLQFRIPEPVRV 247
Query: 288 ADIRSRDYLQ 297
AD++SR+ ++
Sbjct: 248 ADVKSREIVR 257
>gi|425700997|gb|AFX92159.1| endonuclease V [Megavirus courdo11]
Length = 236
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 140/251 (55%), Gaps = 21/251 (8%)
Query: 48 AQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKE 107
+ Q N W + Q + K +I D F N T +GG+D+SF +
Sbjct: 5 SNEQKNIWIDYQILIAKSIIQVDMF-----NDITL--------------VGGLDISFDRA 45
Query: 108 DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHF 167
+ AC I + D+QT IVYED+ + L +PYV GFL RE PV LLD +K +
Sbjct: 46 IENKACAYITIYDIQTKTIVYEDHEICHLDIPYVSGFLGLREVPVYKILLDRVKINKPNL 105
Query: 168 YPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH--SGVRQLLDAKE 225
YP ++MVDG G+LH RG G AS +G NL TIGVGK +D L H ++ +
Sbjct: 106 YPHIVMVDGYGILHHRGAGSASQLGYELNLPTIGVGKTFLCLDDLYHFKKELKSKFKTEC 165
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPI 285
+ D + L G SG +G A+++T D+ P+++S+GH ISL+TA+ IV C YR+PEPI
Sbjct: 166 TSKGDHLLLEGDSGKIYGAAIKTTNDSTNPLYVSIGHKISLETAINIVLKCCNYRIPEPI 225
Query: 286 RQADIRSRDYL 296
R +DI+S+ Y
Sbjct: 226 RNSDIKSKLYF 236
>gi|452823216|gb|EME30228.1| deoxyribonuclease V [Galdieria sulphuraria]
Length = 258
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 146/244 (59%), Gaps = 11/244 (4%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDP 109
A++ +WT Q+ K++L+ E P ++ + E IGG+D++ KE
Sbjct: 18 AKIKEWTIQQETWKQQLLLE-------PEDLSSTVDMERLFETF-PMIGGLDITPDKEQD 69
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
IA IVVL ++LQ+ Y ++LQVPYVPGFL FREAP L++ ++ +K+ +P
Sbjct: 70 DIAYVGIVVLSSKSLQVKYCQTHCVKLQVPYVPGFLGFREAPALINAVECLKREKVDCFP 129
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
QVL+VDGNG+LHPRGFG A +G+ NL TIGV K+L VDGL +++ + +
Sbjct: 130 QVLLVDGNGILHPRGFGSACQVGLSLNLPTIGVAKSLLSVDGLNTLQIKEQIC---EEGK 186
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQAD 289
+PL+G S G A+ S +PIF+SVG+ I L A+ +V TC+YR+PEPIR AD
Sbjct: 187 RWLPLLGSSNRVLGAALLSNECVKRPIFVSVGYRIKLLEAINLVFHTCRYRIPEPIRIAD 246
Query: 290 IRSR 293
SR
Sbjct: 247 KISR 250
>gi|321459557|gb|EFX70609.1| hypothetical protein DAPPUDRAFT_328008 [Daphnia pulex]
Length = 265
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 144/260 (55%), Gaps = 41/260 (15%)
Query: 55 WTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACG 114
W++ Q +K +LI + W + + L +GG+D+SF K D SIA
Sbjct: 12 WSQEQFTMKSKLIISNTEKW--------------QADRKLNLVGGMDISFCKADSSIAIC 57
Query: 115 CIVVLDL-QTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
+VV + Q L++VYED ++L PY+PGFLAFRE LSL + + + PQVLM
Sbjct: 58 TLVVCSVSQQLKVVYEDSLHVKLSTPYIPGFLAFREFEPCLSLYTKLTSKHSELIPQVLM 117
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH-------------HVDGLTHSGVRQL 220
DGNG+LHPRG GLASH GV N TIGV KNL+ ++ L+ G
Sbjct: 118 FDGNGILHPRGLGLASHFGVCTNTCTIGVAKNLYQMGSILRDENHFSQINSLSAPGDHFF 177
Query: 221 LDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--K 278
+ E N +I+ G A+++T + +P++IS+GH I L+TA+ V M C +
Sbjct: 178 IKNSEGNGGEIL----------GAALKTTQEAKRPVYISIGHRIGLETAIWAV-MQCIDR 226
Query: 279 YRVPEPIRQADIRSRDYLQK 298
YR+PEP RQADIRSR ++K
Sbjct: 227 YRIPEPTRQADIRSRQLIRK 246
>gi|371943372|gb|AEX61201.1| endonuclease V [Megavirus courdo7]
Length = 236
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 139/251 (55%), Gaps = 21/251 (8%)
Query: 48 AQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKE 107
+ Q N W + Q + K +I D F N T +GG+D+SF +
Sbjct: 5 SNEQKNIWIDYQTLIAKSIIQVDMF-----NDITL--------------VGGLDISFDRV 45
Query: 108 DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHF 167
+ AC I + D+QT IVYED+ + L +PYV GFL RE PV LL+ +K +
Sbjct: 46 IENKACAYITIYDIQTKTIVYEDHEICHLDIPYVSGFLGLREVPVYKILLNRVKINKPNL 105
Query: 168 YPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH--SGVRQLLDAKE 225
YP ++MVDG G+LH RG G AS +G NL TIGVGK +D L ++ +
Sbjct: 106 YPHIVMVDGYGILHHRGAGSASQLGYELNLPTIGVGKTFLCLDDLYRLKKELKSRFKTEC 165
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPI 285
+ D + L G SG +G A+++T D+ P+++S+GH ISL+TA+ +V C YR+PEPI
Sbjct: 166 TSKGDYLLLKGDSGKIYGAAIKTTNDSTNPLYVSIGHKISLETAMNVVLKCCNYRIPEPI 225
Query: 286 RQADIRSRDYL 296
R +DI+S+ Y
Sbjct: 226 RNSDIKSKLYF 236
>gi|119331184|ref|NP_001073245.1| endonuclease V [Bos taurus]
gi|94574253|gb|AAI15997.1| Hypothetical protein LOC526597 [Bos taurus]
gi|296476138|tpg|DAA18253.1| TPA: hypothetical protein LOC526597 [Bos taurus]
Length = 215
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 116/172 (67%), Gaps = 8/172 (4%)
Query: 133 LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIG 192
++ L PYV GFLAFRE P L+ + +++R PQVL VDGNG+LH RGFG+A H+G
Sbjct: 1 MVTLTAPYVSGFLAFRELPFLVDAVQQLRQREPRLMPQVLFVDGNGVLHHRGFGVACHLG 60
Query: 193 VLANLTTIGVGKNLHHVDGLTHSGVR----QLLDAKENNNEDIIPLMGGSGSTWGVAMRS 248
VL +L IGV K L VDGL ++ + QLL A D PLMGGSG+ G A+RS
Sbjct: 61 VLTDLPCIGVAKKLLQVDGLENNALHKEKIQLLKA----GGDSFPLMGGSGTVLGRALRS 116
Query: 249 TPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
+ KP+++SVGH ISL+ AV + CK+R+PEP+RQADIRSRDY+++ Q
Sbjct: 117 HDHSTKPLYVSVGHKISLEAAVRLTHSCCKFRIPEPVRQADIRSRDYIRRTQ 168
>gi|426238385|ref|XP_004013135.1| PREDICTED: endonuclease V isoform 2 [Ovis aries]
Length = 215
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 116/172 (67%), Gaps = 8/172 (4%)
Query: 133 LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIG 192
++ L PYV GFLAFRE P L+ + +++R PQVL VDGNG+LH RGFG+A H+G
Sbjct: 1 MVTLTAPYVSGFLAFRELPFLVDAVQQLRQREPCLMPQVLFVDGNGVLHHRGFGVACHLG 60
Query: 193 VLANLTTIGVGKNLHHVDGLTHSGVR----QLLDAKENNNEDIIPLMGGSGSTWGVAMRS 248
VL +L IGV K L VDGL ++ + QLL A D PLMGGSG+ G A+RS
Sbjct: 61 VLTDLPCIGVAKKLLQVDGLENNALHKEKIQLLKA----GGDSFPLMGGSGTILGRALRS 116
Query: 249 TPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
+ KP+++SVGH ISL+ AV + CK+R+PEP+RQADIRSRDY+++ Q
Sbjct: 117 HDHSTKPLYVSVGHKISLEAAVRLTHSCCKFRIPEPVRQADIRSRDYIRRTQ 168
>gi|221109306|ref|XP_002162439.1| PREDICTED: endonuclease V-like [Hydra magnipapillata]
Length = 348
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 147/271 (54%), Gaps = 20/271 (7%)
Query: 32 NYCEEEREALASPDPAAQAQLNQWTEIQDELKKRL-ITEDFFTWNLPNSTTTNTSTKEEE 90
N E E L+S D ++ ++ W Q++LKK+L +TE + N ++
Sbjct: 66 NKGESYAEILSSLDKNYKSLIDSWISEQEDLKKKLKLTE---SKNFLSN----------- 111
Query: 91 EVLLKYIGGVDMSF--SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFR 148
LKY+ GVD+SF K D A IVVL L+ VY+ ++ L Y+P FLAFR
Sbjct: 112 ---LKYVAGVDLSFPSDKNDLIHASASIVVLSYPDLKTVYKKTEIVHLTSIYIPQFLAFR 168
Query: 149 EAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHH 208
E + L + ++P +++VDGNGLLHPR FG A H+GV N+ +IGV K L H
Sbjct: 169 EFDSVKKLFSELNNTHPQYFPDLVLVDGNGLLHPRKFGFACHLGVSMNIPSIGVAKKLFH 228
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
VD + + + ++ L+G +G +RST ++ PI +SVGH + L T
Sbjct: 229 VDDIINIDEFKNKKKLLKKKGELFELVGKDDFVYGCVLRSTSNSPNPIILSVGHNVLLTT 288
Query: 269 AVMIVKMTCKYRVPEPIRQADIRSRDYLQKH 299
A+ IV CK+R+PEP+R AD SR+YL+ H
Sbjct: 289 AIEIVNHCCKFRIPEPVRLADQFSREYLRSH 319
>gi|395749561|ref|XP_002827970.2| PREDICTED: endonuclease V-like [Pongo abelii]
Length = 245
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 120/174 (68%)
Query: 125 QIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRG 184
Q+VYE+ ++ L PYV GFLAFRE P LL L+ ++++ PQVL+VDGNG+LH RG
Sbjct: 11 QVVYEESRMVSLTAPYVSGFLAFREVPFLLELVQQLREKEPGLMPQVLLVDGNGVLHHRG 70
Query: 185 FGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGV 244
FG+A H+GVL +L +GV K L VDGL ++ + + D PL+G SG+ G+
Sbjct: 71 FGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDSFPLLGDSGTVLGM 130
Query: 245 AMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
A+RS + +P+++SVGH +SL+ AV ++ C++R+PEP+RQADI SR++++K
Sbjct: 131 ALRSHDRSTRPLYVSVGHKMSLEAAVRLICCCCRFRIPEPVRQADICSREHIRK 184
>gi|344250121|gb|EGW06225.1| Putative endonuclease FLJ39025-like [Cricetulus griseus]
Length = 255
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 117/166 (70%)
Query: 133 LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIG 192
++RL+ PYV GFLAFRE P L+ L+ ++++ PQVL+VDGNG+LH RGFG+A H+G
Sbjct: 1 MVRLKAPYVSGFLAFREVPFLVELVQRLQEKEPGLMPQVLLVDGNGVLHQRGFGVACHLG 60
Query: 193 VLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDT 252
VL +L +GV K L VDGL ++ + + + D PLMG SG+ G+A++S +
Sbjct: 61 VLTDLPCVGVAKKLLQVDGLENNSLHKEKIVLLQSGGDTFPLMGNSGTVLGMALKSHDHS 120
Query: 253 LKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
KP+++SVGH ISL+ AV + C++R+PEPIRQADIRSR+Y+++
Sbjct: 121 TKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIRSREYIRR 166
>gi|448825073|ref|YP_007418004.1| endonuclease V [Megavirus lba]
gi|444236258|gb|AGD92028.1| endonuclease V [Megavirus lba]
Length = 236
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 138/251 (54%), Gaps = 21/251 (8%)
Query: 48 AQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKE 107
+ Q N W + Q + K +I D F N T +GG+D+SF +
Sbjct: 5 SNEQKNIWIDYQTLIAKSIIQVDMF-----NDITL--------------VGGLDISFDRV 45
Query: 108 DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHF 167
+ AC I + D+QT IVYED+ + L +PYV GFL RE PV LL+ +K +
Sbjct: 46 IENKACAYITIYDIQTKTIVYEDHEICHLDIPYVSGFLGLREVPVYKILLNRVKINKPNL 105
Query: 168 YPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH--SGVRQLLDAKE 225
YP ++MVDG G+LH RG G AS +G NL IGVGK +D L ++ +
Sbjct: 106 YPHIVMVDGYGILHHRGAGSASQLGYELNLPIIGVGKTFLCLDDLYRLKKELKSRFKTEC 165
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPI 285
+ D + L G SG +G A+++T D+ P+++S+GH ISL+TA+ +V C YR+PEPI
Sbjct: 166 TSKGDYLLLEGDSGKIYGAAIKTTNDSTNPLYVSIGHKISLETAMDVVLKCCNYRIPEPI 225
Query: 286 RQADIRSRDYL 296
R +DI+S+ Y
Sbjct: 226 RNSDIKSKLYF 236
>gi|363540352|ref|YP_004894182.1| mg131 gene product [Megavirus chiliensis]
gi|350611517|gb|AEQ32961.1| endonuclease V [Megavirus chiliensis]
Length = 236
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 138/251 (54%), Gaps = 21/251 (8%)
Query: 48 AQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKE 107
+ Q N W + Q + K +I D F N T +GG+D+SF +
Sbjct: 5 SNEQKNIWIDYQTLIAKSIIQVDMF-----NDITL--------------VGGLDISFDRV 45
Query: 108 DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHF 167
+ AC I + D+QT IVYED+ + L +PYV GFL RE PV LL+ +K +
Sbjct: 46 IENKACAYITIYDIQTKTIVYEDHEICHLDIPYVSGFLGLREVPVYKILLNRVKINKPNL 105
Query: 168 YPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE-- 225
YP ++MVDG G+LH RG G AS +G NL TIGVGK +D L + L K
Sbjct: 106 YPHIVMVDGYGILHHRGAGSASQLGYELNLPTIGVGKTFLCLDDLYNLKKELKLKFKTEC 165
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPI 285
+ D + L G SG +G A+++T D+ P+++S+GH ISL TA+ +V C YR+PEPI
Sbjct: 166 TSKGDYLLLKGDSGKIYGAAIKTTNDSTNPLYVSIGHKISLQTAMNVVLKCCNYRIPEPI 225
Query: 286 RQADIRSRDYL 296
R +DI+S+ Y
Sbjct: 226 RNSDIKSKLYF 236
>gi|28893575|ref|NP_796368.1| endonuclease V isoform 2 [Mus musculus]
gi|26335219|dbj|BAC31310.1| unnamed protein product [Mus musculus]
gi|33991712|gb|AAH56486.1| RIKEN cDNA A730011L01 gene [Mus musculus]
gi|74182494|dbj|BAE42869.1| unnamed protein product [Mus musculus]
gi|148702763|gb|EDL34710.1| RIKEN cDNA A730011L01, isoform CRA_c [Mus musculus]
Length = 255
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 114/166 (68%)
Query: 133 LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIG 192
++ L+ PYV GFLAFRE P L+ L+ ++++ PQV++VDGNG+LH RGFG+A H+G
Sbjct: 1 MVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQVVLVDGNGVLHQRGFGVACHLG 60
Query: 193 VLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDT 252
VL L IGV K L VDGL ++ + + D PL+G SG+ G+A+RS +
Sbjct: 61 VLTELPCIGVAKKLLQVDGLENNALHKEKIVLLQAGGDTFPLIGSSGTVLGMALRSHDHS 120
Query: 253 LKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
KP+++SVGH ISL+ AV + C++R+PEPIRQADIRSR+Y+++
Sbjct: 121 TKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIRSREYIRR 166
>gi|74215390|dbj|BAE41901.1| unnamed protein product [Mus musculus]
Length = 255
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 114/166 (68%)
Query: 133 LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIG 192
++ L+ PYV GFLAFRE P L+ L+ ++++ PQV++VDGNG+LH RGFG+A H+G
Sbjct: 1 MVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQVVLVDGNGVLHQRGFGVACHLG 60
Query: 193 VLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDT 252
VL L IGV K L VDGL ++ + + D PL+G SG+ G+A+RS +
Sbjct: 61 VLTELPCIGVAKKLLQVDGLENNALHKEKIVLLQAGGDTFPLIGSSGTVLGMALRSHDHS 120
Query: 253 LKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
KP+++SVGH ISL+ AV + C++R+PEPIRQADIRSR+Y+++
Sbjct: 121 TKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIRSREYIRR 166
>gi|149054979|gb|EDM06796.1| rCG35491, isoform CRA_c [Rattus norvegicus]
Length = 251
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 113/166 (68%)
Query: 133 LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIG 192
++ L+ PYV GFLAFRE P L+ L+ ++++ PQVL+VDGNG+LH RGFG+A H+G
Sbjct: 1 MVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQVLLVDGNGVLHQRGFGVACHLG 60
Query: 193 VLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDT 252
VL L +GV K L V+GL ++ + D PL+G SG+ G+A++S +
Sbjct: 61 VLTELPCVGVAKKLLQVEGLENNASHKEKIVLLQAGGDTFPLIGNSGTVLGMALKSHDHS 120
Query: 253 LKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
KP+++SVGH ISL+ AV + C++R+PEPIRQADIRSR+Y+++
Sbjct: 121 TKPLYVSVGHRISLEVAVRLTHRCCRFRIPEPIRQADIRSREYIRR 166
>gi|148702761|gb|EDL34708.1| RIKEN cDNA A730011L01, isoform CRA_a [Mus musculus]
Length = 306
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 131/247 (53%), Gaps = 43/247 (17%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK R++ D W S + L+ +GGVD+SF K D
Sbjct: 14 LSLWKGEQARLKARVVDRDTEAWQRDPSFSG-----------LQKVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC AFRE P L+ L+ ++++ PQV
Sbjct: 63 AC--------------------------------AFREVPFLVELVQRLQEKEPDLMPQV 90
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
++VDGNG+LH RGFG+A H+GVL L IGV K L VDGL ++ + + D
Sbjct: 91 VLVDGNGVLHQRGFGVACHLGVLTELPCIGVAKKLLQVDGLENNALHKEKIVLLQAGGDT 150
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+G SG+ G+A+RS + KP+++SVGH ISL+ AV + C++R+PEPIRQADIR
Sbjct: 151 FPLIGSSGTVLGMALRSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQADIR 210
Query: 292 SRDYLQK 298
SR+Y+++
Sbjct: 211 SREYIRR 217
>gi|323451998|gb|EGB07873.1| hypothetical protein AURANDRAFT_27088 [Aureococcus anophagefferens]
Length = 290
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 128/224 (57%), Gaps = 23/224 (10%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+DMS+ +D A +VV++L + + V+ + +R++ PY+PGFLAFREAP L
Sbjct: 62 VAGLDMSYFPDDDGAAVASLVVVELPSRRRVHAIHENVRVEGPYIPGFLAFREAPHYCRL 121
Query: 157 LDNMKKRANHFYPQVLMVDGNGLL------------HPRGFGLASHIGVLANLTTIGVGK 204
LD +++ P +VDGNG+L HPRGFG ASH+GV A++ T+GV K
Sbjct: 122 LDRLRRDRPDVVPVACLVDGNGVLRPPARTSNPTSMHPRGFGAASHVGVAASIPTVGVAK 181
Query: 205 NLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPD-----------TL 253
+L VDGL VR+ A PL+G SG TWG A+RS+
Sbjct: 182 SLLAVDGLDERTVREGCAAAGLGFGGHTPLVGDSGRTWGAALRSSEPPPKRETTGQDAAF 241
Query: 254 KPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQ 297
+PIF+SVGH + L TAV + C YRVPEPIR AD+ RD ++
Sbjct: 242 RPIFVSVGHGVCLRTAVALTTACCAYRVPEPIRLADLEGRDVVR 285
>gi|159468792|ref|XP_001692558.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278271|gb|EDP04036.1| predicted protein [Chlamydomonas reinhardtii]
Length = 203
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 128/214 (59%), Gaps = 23/214 (10%)
Query: 93 LLKYIGGVDMSF------SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
LL+ +GG+D+SF + P +A +VV + ++YEDY + L +PY+PGFL
Sbjct: 5 LLQRVGGLDISFVEDGGPTSHGPGVAA--LVVCSYPDMAVLYEDYQPVDLAIPYLPGFLG 62
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FREA LL+ ++ RA PQVL+VDG G+LHPR G A +GV+ +GV KNL
Sbjct: 63 FREAAAYKVLLERVRARALQLEPQVLLVDGCGVLHPRACGSACQVGVVCGYPAVGVAKNL 122
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDI-IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
VDGL + ED+ +PL G SG+ G A+ + +P+F+SVGH +S
Sbjct: 123 LVVDGL-------------DRWEDVQVPLRGVSGAVHGAAL-CPGASRRPLFVSVGHRLS 168
Query: 266 LDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKH 299
L +AV +V C +R+PEPIRQAD+RSR +L+ H
Sbjct: 169 LASAVELVARCCLHRIPEPIRQADLRSRQWLRTH 202
>gi|407404635|gb|EKF30014.1| endonuclease V, putative [Trypanosoma cruzi marinkellei]
Length = 314
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 127/221 (57%), Gaps = 20/221 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+Y+GGVD+SF K ++A C+V+++ ++ Y + PY+PGFLAFRE L
Sbjct: 94 LRYVGGVDVSFLK-GTNLAVACLVIMEYPNMRRCRTVYHQCEVTEPYIPGFLAFREVLPL 152
Query: 154 LSLLDNMK----KRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHV 209
+ L++ ++ YPQ+L+VDG G+ HP GLASH+GV+ ++ TIG KN V
Sbjct: 153 IELMNKLQDGNCAEDMSVYPQLLLVDGCGVQHPLCCGLASHLGVVLDIPTIGCAKNFMAV 212
Query: 210 DGLTHSGVRQLLDAKENNNED------------IIPLMGGSGSTWGVAMRSTPDTLKPIF 257
DG+T +++L E N+ED + ++G SG+ WG A KPIF
Sbjct: 213 DGMTRESMQRLF---ETNDEDDGGAKTRTMAPFVKSMIGQSGALWGYAATPNAGVKKPIF 269
Query: 258 ISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
IS GH + A +V C++RVPEPIR AD SR+Y+++
Sbjct: 270 ISPGHRVGYAEAAALVLSMCRHRVPEPIRAADFSSREYIRR 310
>gi|290994530|ref|XP_002679885.1| predicted protein [Naegleria gruberi]
gi|284093503|gb|EFC47141.1| predicted protein [Naegleria gruberi]
Length = 261
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 142/249 (57%), Gaps = 21/249 (8%)
Query: 55 WTEIQDELKKRLITEDF-FTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
W Q LK+++I D T++ N T LK IGGVD+SF + + A
Sbjct: 20 WKTEQYNLKRQMILRDHNLTFDPKNLDKT-----------LKLIGGVDISFENGNSNRAI 68
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
++VL L+IV+E+ + + +PY+ G+LAFRE P + L++N++ + H PQV++
Sbjct: 69 ATLIVLSFPDLKIVHEESEQVEMTLPYIAGYLAFREVPHIQRLIENVRNKVPHMMPQVIL 128
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH---SGVRQLLDAKENNNED 230
VDGNG LH RGFG A H+GV+ N+ TIGV K + V GLT G+ Q L K +
Sbjct: 129 VDGNGHLHQRGFGSACHLGVVENIPTIGVAKKILMVKGLTDEYIDGLEQQLTRK----GE 184
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
I + S G +++ D + ++IS GH + LDTAV IVK +PEPI QAD+
Sbjct: 185 CIDIDIDSEKRIGCILKT--DNITNVYISPGHRVCLDTAVSIVKRCSLKSIPEPIYQADL 242
Query: 291 RSRDYLQKH 299
SR++++K+
Sbjct: 243 ISRNHVKKY 251
>gi|281206460|gb|EFA80646.1| putative endonuclease V [Polysphondylium pallidum PN500]
Length = 528
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 150/267 (56%), Gaps = 19/267 (7%)
Query: 36 EEREALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK 95
+E++ P+ A Q+N+W Q ++ ++ TN++ + + LK
Sbjct: 277 KEKDNYGRPNDPAPDQMNKWKAEQLKMAASVVK-------------TNSNNLKLSD--LK 321
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
YIGGVD+SF+K + AC IVV++ +L++VYE Y +++L PY+ G+LAFRE P LL
Sbjct: 322 YIGGVDISFAKNNKIDACASIVVIEYPSLKVVYESYKMVKLTQPYIAGYLAFREIPHLLP 381
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
L +++K+ A + PQV+++DGNG+ H RG G A H+GV+ + TIGV K L G+T+
Sbjct: 382 LWNDLKRNAPYLVPQVMVLDGNGINHMRGLGAACHLGVMIDCPTIGVAKQLLVCHGVTNE 441
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
+ + + N+ I + G AM++ + I+IS GH + A+ I K
Sbjct: 442 LIEDQFNQR-GNSATIEMRNSMNNELLGYAMKNVDS--ENIYISPGHKMDAKLALEIAKA 498
Query: 276 TCKYR-VPEPIRQADIRSRDYLQKHQS 301
T R +PEP QAD SR +L+++ S
Sbjct: 499 TLNNRPIPEPTFQADKLSRQFLKQYYS 525
>gi|407849072|gb|EKG03927.1| endonuclease V, putative [Trypanosoma cruzi]
Length = 314
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/221 (38%), Positives = 127/221 (57%), Gaps = 20/221 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+++GGVD+SF K ++A C+VV++ ++ Y + PY+PGFLAFRE L
Sbjct: 94 LRHVGGVDVSFLK-GTNLAVACLVVMEYPNMRRCRTVYHQCEVTEPYIPGFLAFREVVPL 152
Query: 154 LSLLDNMK----KRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHV 209
+ L++ ++ YPQ+L+VDG G+ HP GLASH+GV+ ++ T+G KN V
Sbjct: 153 VELMNKLRDGNCAEDMSVYPQLLLVDGCGVQHPLRCGLASHLGVVLDIPTVGCAKNFMAV 212
Query: 210 DGLTHSGVRQLLDAKENNNED------------IIPLMGGSGSTWGVAMRSTPDTLKPIF 257
DG+T +++L +A N+ED + ++G SG WG A KPIF
Sbjct: 213 DGMTRKSMQRLFEA---NDEDGGGAKTRTMAPFVKSMIGQSGMLWGYAATPNAGVKKPIF 269
Query: 258 ISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
IS GH + A +V CK+R+PEPIR AD SR+Y+++
Sbjct: 270 ISPGHRVGYAEAAALVLSMCKHRIPEPIRAADFSSREYIRR 310
>gi|167387477|ref|XP_001738180.1| endonuclease V [Entamoeba dispar SAW760]
gi|165898709|gb|EDR25495.1| endonuclease V, putative [Entamoeba dispar SAW760]
Length = 241
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 132/244 (54%), Gaps = 17/244 (6%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW + Q K ++ ED W L L+ +GG+D+SFS P++A
Sbjct: 4 QWEKYQILHSKDVVLEDSHEWTLDT---------------LRRVGGLDISFSTNHPNLAI 48
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+V+ + + + + + VPY+ GFL FRE V LL++ K++ YP+V++
Sbjct: 49 GCLVICEYPSGKELLTLTCRKIVTVPYISGFLGFREVEVYHELLNSCKEKYPELYPEVVL 108
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG A+H+G+ ++ +IGV K + VDG+ + + + II
Sbjct: 109 VDGNGYYHPRRFGSATHVGICCDIPSIGVAKTVLCVDGIGKKEINIVTSQIKAGESTIIS 168
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
SG +RS ++ PI +S GH +SL TAV+I K C +++PEPIR AD+ SR
Sbjct: 169 T--SSGEVLCGVIRSRGGSINPIVVSCGHKVSLSTAVIICKECCLHKIPEPIRLADLISR 226
Query: 294 DYLQ 297
+ L+
Sbjct: 227 NLLR 230
>gi|167379124|ref|XP_001735001.1| endonuclease V [Entamoeba dispar SAW760]
gi|165903131|gb|EDR28781.1| endonuclease V, putative [Entamoeba dispar SAW760]
Length = 241
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 131/245 (53%), Gaps = 17/245 (6%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
QW + Q K +I ED W L L+++GG+D+SFS P +A
Sbjct: 3 KQWEKYQILHSKDVILEDSHEWTLDT---------------LRHVGGLDISFSTNHPDLA 47
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
GC+V+ + + + + + VPY+ GFL FRE V LL++ K++ YP+V+
Sbjct: 48 IGCLVICEYPSGKELLTLTCRKIITVPYISGFLGFREVEVYHELLNSCKEKYPELYPEVV 107
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
+VDGNG HPR FG A+H+G+ ++ +IGV K + VDG+ + + + I
Sbjct: 108 LVDGNGYYHPRRFGSATHVGICCDIPSIGVAKTVLCVDGIGKKEINIVTSQIKAGESTTI 167
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRS 292
SG +RS ++ PI +S GH +SL TAV+I K C +++PEPIR AD+ S
Sbjct: 168 ST--SSGEVLCGVIRSRGGSINPIVVSCGHKVSLSTAVIICKECCLHKIPEPIRLADLIS 225
Query: 293 RDYLQ 297
R+ L+
Sbjct: 226 RNLLR 230
>gi|444727745|gb|ELW68223.1| Endonuclease V [Tupaia chinensis]
Length = 217
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 116/195 (59%), Gaps = 12/195 (6%)
Query: 104 FSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKR 163
+ + D AC +VVL LQ++YE+ ++ L PYV GFLAFRE P L+ + ++ +
Sbjct: 17 WKRGDSVSACASLVVLSYPELQVLYEESRMVSLTAPYVAGFLAFREVPFLVDAVQRLRDK 76
Query: 164 ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDA 223
PQ GFG+A H+GVL +L +GV K L VDGL +S +
Sbjct: 77 EPGLMPQA------------GFGVACHLGVLTDLPCVGVAKKLLQVDGLENSPWHKEQIR 124
Query: 224 KENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPE 283
+ + D PL+ SG+ G+A+RS + KP+++SVGH +SL+ AV + C++RVPE
Sbjct: 125 RLHAGGDTFPLVSSSGAVLGMALRSHDHSTKPLYVSVGHRMSLEAAVRLTHRCCRFRVPE 184
Query: 284 PIRQADIRSRDYLQK 298
P+RQADIRSR+Y+++
Sbjct: 185 PVRQADIRSREYIRR 199
>gi|302837624|ref|XP_002950371.1| hypothetical protein VOLCADRAFT_60257 [Volvox carteri f.
nagariensis]
gi|300264376|gb|EFJ48572.1| hypothetical protein VOLCADRAFT_60257 [Volvox carteri f.
nagariensis]
Length = 168
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/177 (48%), Positives = 115/177 (64%), Gaps = 11/177 (6%)
Query: 124 LQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPR 183
+Q++YEDY + L +PY+PG+L FRE LL +++ + PQVL+VDG GLLHPR
Sbjct: 1 MQLLYEDYEPVDLSIPYLPGYLGFRECDAYNRLLRSVEDSPHR--PQVLLVDGCGLLHPR 58
Query: 184 GFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWG 243
G G A +G+ +GV KNL VDGL VR+ L + +PL+G SG+ G
Sbjct: 59 GCGSACQVGITCGYPAVGVAKNLLTVDGLDRFAVRRQLQVRH------VPLVGHSGAVHG 112
Query: 244 VAMRSTPD-TLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKH 299
VA+ P + KP+FISVGH +SL TAV IV+ C +RVPEPIRQAD+RSR +L++H
Sbjct: 113 VAL--CPGLSRKPLFISVGHRLSLPTAVEIVRRCCLHRVPEPIRQADLRSRQWLREH 167
>gi|440293889|gb|ELP86936.1| endonuclease V, putative [Entamoeba invadens IP1]
Length = 248
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 17/244 (6%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
+W Q + + ED W L LKYIGG+D++FS ++ ++A
Sbjct: 11 EWKAYQLQHAPEVKREDDHNWTLDT---------------LKYIGGLDITFSTKETNVAL 55
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+VV + + + + + + VPY+ G+L FRE V LL+ KK + FYP+V++
Sbjct: 56 GCLVVCEYPSCKEILKLTLRKVINVPYISGYLGFREVEVYKELLEMCKKDHSEFYPEVVL 115
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG+ HPR FG A+H+G ++ +IGV K + VDG+ + + + A N D I
Sbjct: 116 VDGNGVYHPRRFGSATHVGFACDIPSIGVAKTVLLVDGVGKTEINKA--ALSINPGDSID 173
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
+ G +RS+ PI +S G+ +SL TAV I K C +++PEPIR AD+ SR
Sbjct: 174 VNSKKGEVLCAVIRSSGGGKNPIIVSCGNKVSLTTAVAICKTCCLHKIPEPIRLADLDSR 233
Query: 294 DYLQ 297
L+
Sbjct: 234 KMLR 237
>gi|71659503|ref|XP_821473.1| endonuclease V [Trypanosoma cruzi strain CL Brener]
gi|70886854|gb|EAN99622.1| endonuclease V, putative [Trypanosoma cruzi]
Length = 314
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 125/220 (56%), Gaps = 20/220 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+++GGVD+SF K ++A C+VV++ ++ Y + PY+PGFLAFRE L+
Sbjct: 95 RHVGGVDVSFLK-GTNLAVACLVVMEYPNMRRCRTVYHQCEVTEPYIPGFLAFREVVPLV 153
Query: 155 SLLDNMK----KRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
L++ + YPQ+L+VDG G+ HP GLASH+GV+ ++ T+G KN VD
Sbjct: 154 ELMNKFRDGNCAEDMSVYPQLLLVDGCGVQHPLRCGLASHLGVVLDIPTVGCAKNFMAVD 213
Query: 211 GLTHSGVRQLLDAKENNNED------------IIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
G+T ++ L +A N+ED + ++G SG+ WG A KPIFI
Sbjct: 214 GMTRKSMQCLFEA---NDEDGGGSKRRTMAPFVKSMIGQSGTLWGYAATPNAGVKKPIFI 270
Query: 259 SVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
S GH + A +V CK+R+PEPIR AD SR+Y+++
Sbjct: 271 SPGHLVGYAEAAALVLSMCKHRIPEPIRAADFSSREYIRR 310
>gi|183231375|ref|XP_655957.2| serine/threonine- protein kinase 6 [Entamoeba histolytica
HM-1:IMSS]
gi|169802499|gb|EAL50571.2| serine/threonine- protein kinase 6 , putative [Entamoeba
histolytica HM-1:IMSS]
Length = 516
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 149/291 (51%), Gaps = 20/291 (6%)
Query: 8 QPHLRREFHSIPEQMSSCYRSYMENYCEEEREALASPDPAAQAQL-NQWTEIQDELKKRL 66
Q + R E + + SY+ N C++ L DP+ + + QW Q K +
Sbjct: 236 QSNSREEVMKKVRNVKYSFPSYLTNDCKDFINKLIQYDPSKRMIMEKQWENYQILHSKDV 295
Query: 67 ITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI 126
I ED W L NT LL+ G+D+SFS P++A GC+VV + + +
Sbjct: 296 ILEDSHDWTL------NT--------LLR---GLDISFSTNHPNLAIGCLVVCEYPSGKE 338
Query: 127 VYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFG 186
+ + +PY+ GFL FRE V LL++ K++ YPQV++VDGNG HPR FG
Sbjct: 339 LLTLTCRKIITIPYISGFLGFREVEVYHELLNDCKEKYPELYPQVVLVDGNGYYHPRRFG 398
Query: 187 LASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAM 246
A+H+GV ++ +IGV K + VDG+ + + + + +G +
Sbjct: 399 SATHVGVYCDIPSIGVAKTVLCVDGIGKKEINIITSQIKPGESTTVST--SNGEVLCEVI 456
Query: 247 RSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQ 297
RS ++ PI +S G+ +SL TAV+I K C +++PEPIR AD+ SR L+
Sbjct: 457 RSRGGSINPIIVSCGNKVSLSTAVIICKECCLHKIPEPIRLADLISRKLLR 507
>gi|440794254|gb|ELR15421.1| endonuclease V protein [Acanthamoeba castellanii str. Neff]
Length = 173
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 93/128 (72%)
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
V+ VDGNG+LHPRGFGLASH+GVL + TIGVGK HVDGL V+ A + D
Sbjct: 43 VVFVDGNGVLHPRGFGLASHLGVLIGIPTIGVGKTFFHVDGLDMREVKAQAAAACHKGGD 102
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
IPL+G SG WG A RST + PI++SVGH ISL +AV++ + +C +RVPEPIRQAD+
Sbjct: 103 WIPLIGQSGVEWGAAFRSTDGSSNPIYVSVGHRISLASAVLLTQASCLHRVPEPIRQADL 162
Query: 291 RSRDYLQK 298
RSR++L+K
Sbjct: 163 RSREFLRK 170
>gi|358334112|dbj|GAA52558.1| endonuclease V [Clonorchis sinensis]
Length = 262
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG+D+SFSK +A + V+ L++L++V + ++L VPY+P FL +RE + +
Sbjct: 42 IGGLDISFSKYRSDVAVVTLAVVHLESLKLVTQSSIHVKLTVPYLPTFLGYREIDPYIRV 101
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH-- 214
+ ++K+ P +LMVDGNG LHPRGFG A +G +L T+GV KNL V
Sbjct: 102 VRDLKETMPQSMPDILMVDGNGTLHPRGFGSACQVGYQLDLPTLGVAKNLLEVSSTDSPS 161
Query: 215 -----SGVRQLL--DAKEN--NNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
S R++L K N N+ D + + G T GVAM ++ ++KP+FIS GH IS
Sbjct: 162 ELDNWSSHRKVLMESHKSNLRNHGDRVEIRNAEGETCGVAMLNSTGSMKPVFISPGHRIS 221
Query: 266 LDTAVMIVKMTCKYRVPEPIRQADIRSR 293
LDTA +V T K+R PEPIR AD SR
Sbjct: 222 LDTACTLVLKTSKFRTPEPIRLADQISR 249
>gi|67466507|ref|XP_649401.1| Endonuclease V [Entamoeba histolytica HM-1:IMSS]
gi|56465831|gb|EAL44013.1| Endonuclease V, putative [Entamoeba histolytica HM-1:IMSS]
Length = 239
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 17/244 (6%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW + Q K +I ED W L NT L +GG+D+SFS P++A
Sbjct: 4 QWEKYQILHSKDVILEDSHDWTL------NT---------LLRVGGLDISFSTNHPNLAI 48
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+VV + + + + + +PY+ GFL FRE V LL++ K++ + YPQV++
Sbjct: 49 GCLVVCEYPSGKELLTLTCRKIITIPYISGFLGFREVEVYHELLNDCKEKYSELYPQVVL 108
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG A+H+GV ++ +IGV K + VDG+ + + + +
Sbjct: 109 VDGNGYYHPRRFGSATHVGVYCDIPSIGVAKTVLCVDGIGKKEINIITSQLKPGESTTVS 168
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
+G +RS ++ PI +S G+ +SL TAV+I K C +++PEPIR AD+ SR
Sbjct: 169 T--SNGEALCEVIRSRGGSINPIIVSCGNKVSLSTAVIICKECCLHKIPEPIRLADLISR 226
Query: 294 DYLQ 297
L+
Sbjct: 227 KLLR 230
>gi|449707953|gb|EMD47506.1| endonuclease V, putative [Entamoeba histolytica KU27]
Length = 239
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 131/244 (53%), Gaps = 17/244 (6%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW + Q K +I ED W L NT L +GG+D+SFS P++A
Sbjct: 4 QWEKYQILHSKDVILEDSHDWTL------NT---------LSRVGGLDISFSTNHPNLAI 48
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+VV + + + + + +PY+ GFL FRE V LL++ K++ YPQV++
Sbjct: 49 GCLVVCEYPSGKELLTLTCRKIITIPYISGFLGFREVEVYHELLNDCKEKYPELYPQVVL 108
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG A+H+GV ++ +IGV K + VDG+ + + + +
Sbjct: 109 VDGNGYYHPRRFGSATHVGVYCDIPSIGVAKTVLCVDGIGKKEINIITSQIKPGESTTVS 168
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
+G +RS ++ PI +S G+ +SL TAV+I K C +++PEPIR AD+ SR
Sbjct: 169 T--SNGEVLCEVIRSRGGSINPIIVSCGNKVSLSTAVIICKECCLHKIPEPIRLADLISR 226
Query: 294 DYLQ 297
L+
Sbjct: 227 KLLR 230
>gi|183233713|ref|XP_001913899.1| endonuclease V [Entamoeba histolytica HM-1:IMSS]
gi|169801438|gb|EDS89324.1| endonuclease V, putative [Entamoeba histolytica HM-1:IMSS]
Length = 239
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 131/248 (52%), Gaps = 25/248 (10%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW + Q K +I ED W L NT L +GG+D+SFS P+ A
Sbjct: 4 QWEKYQILHSKDVILEDSHDWTL------NT---------LSRVGGLDISFSTNHPNFAI 48
Query: 114 GCIVVLDL----QTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
GC+VV + + L + Y + +PY+ GFL FRE V LL++ K++ YP
Sbjct: 49 GCLVVCEYPSGKELLTLTYRKI----ITIPYISGFLGFREVEVYHELLNDCKEKYPELYP 104
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
QV++VDGNG HPR FG A+H+GV ++ +IGV K + VDG+ + + +
Sbjct: 105 QVVLVDGNGYYHPRRFGSATHVGVYCDIPSIGVAKTVLCVDGIGKKEINIITSQIKPGES 164
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQAD 289
+ +G +RS ++ PI +S G+ +SL TAV+I K C +++PEPIR AD
Sbjct: 165 TTVST--SNGEALCEVIRSRGGSINPIIVSCGNKVSLSTAVIICKECCLHKIPEPIRLAD 222
Query: 290 IRSRDYLQ 297
+ SR L+
Sbjct: 223 LISRKLLR 230
>gi|67463230|ref|XP_648272.1| Endonuclease V [Entamoeba histolytica HM-1:IMSS]
gi|56464363|gb|EAL42886.1| Endonuclease V, putative [Entamoeba histolytica HM-1:IMSS]
Length = 239
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 130/244 (53%), Gaps = 17/244 (6%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW Q K +I ED W L NT L +GG+D+SFS P++A
Sbjct: 4 QWENYQILHSKDVILEDSHDWTL------NT---------LLRVGGLDISFSTNHPNLAI 48
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+VV + + + + + +PY+ GFL FRE V LL++ K++ YPQV++
Sbjct: 49 GCLVVCEYPSGKELLTLTCRKIITIPYISGFLGFREVEVYHELLNDCKEKYPELYPQVVL 108
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG A+H+GV ++ +IGV K + VDG+ + + + +
Sbjct: 109 VDGNGYYHPRRFGSATHVGVYCDIPSIGVAKTVLCVDGIGKKEINMITSQIKPGESTTVS 168
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
+G +RS ++ PI +S G+ +SL TAV+I K C +++PEPIR AD+ SR
Sbjct: 169 T--SNGEVLCEVIRSRGGSINPIIVSCGNKVSLSTAVIICKECCLHKIPEPIRLADLISR 226
Query: 294 DYLQ 297
L+
Sbjct: 227 KLLR 230
>gi|67471931|ref|XP_651871.1| endonuclease V [Entamoeba histolytica HM-1:IMSS]
gi|56468656|gb|EAL46485.1| endonuclease V, putative [Entamoeba histolytica HM-1:IMSS]
Length = 239
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 131/244 (53%), Gaps = 17/244 (6%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW + Q K +I ED W L NT L +GG+D+SFS P++A
Sbjct: 4 QWEKYQILHSKDVILEDSHDWTL------NT---------LLRVGGLDISFSTNHPNLAI 48
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+VV + + + + + +PY+ GFL FRE V LL++ K++ YPQV++
Sbjct: 49 GCLVVCEYPSGKELLTLTCRKIITIPYISGFLGFREVEVYHELLNDCKEKYPELYPQVVL 108
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG A+H+GV ++ +IGV K + VDG+ + + + +
Sbjct: 109 VDGNGYYHPRRFGSATHVGVYCDIPSIGVAKTVLCVDGIGKKEINIITSQIKPGESTTVS 168
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
+G +RS ++ PI +S G+ +SL TAV+I K C +++PEPIR AD+ SR
Sbjct: 169 T--SNGEVLCEVIRSRGGSINPIIVSCGNKVSLSTAVIICKECCLHKIPEPIRLADLISR 226
Query: 294 DYLQ 297
L+
Sbjct: 227 KLLR 230
>gi|384491904|gb|EIE83100.1| hypothetical protein RO3G_07805 [Rhizopus delemar RA 99-880]
Length = 193
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 116/181 (64%), Gaps = 6/181 (3%)
Query: 124 LQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPR 183
LQ+VY+ + +L +PY+ GFLAFRE LL+LLD +K YPQ+L++DGNGLLHPR
Sbjct: 6 LQVVYKRFLETKLYLPYISGFLAFREVNPLLTLLDQLKSEQPDLYPQILLIDGNGLLHPR 65
Query: 184 GFGLASHIGVLANLTTIGVGKNLHHV-DGL-THSGVRQLLDAKENNNEDIIPLMGGSGST 241
FG+A H+GVLA+ TIGV KN + D L + + ++ A D + L+G
Sbjct: 66 QFGIACHLGVLADTPTIGVAKNFLMIPDELESITEMKNKWHATLQAKGDRLDLVGKKNDM 125
Query: 242 -WGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC-KYRVPEPIRQADIRSRDYLQKH 299
+G A+R++ + P+ +S GH +SLD AV +V TC KYR+PEPIR AD+ SR Y++
Sbjct: 126 LYGTALRTS--SKNPLLVSQGHRVSLDLAVQVVLATCPKYRIPEPIRMADLESRAYIRNK 183
Query: 300 Q 300
+
Sbjct: 184 K 184
>gi|198437152|ref|XP_002120181.1| PREDICTED: similar to novel endonuclease V protein [Ciona
intestinalis]
Length = 245
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 132/251 (52%), Gaps = 19/251 (7%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q+ +W Q+EL+ ++I D ++L +KY+GG D+S+SK +
Sbjct: 9 QIAEWNSKQEELRDKIIRSDG-DFSLSK---------------VKYVGGFDVSYSKINHE 52
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
+A C+VVL ++ VY + + ++L PY +LAFRE L +K + + PQ
Sbjct: 53 LAVSCMVVLSYPEMKQVYMNTTKVKLSCPYKSSYLAFREIEPFQQELQLLKAKKPNLEPQ 112
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHV--DGLTHSGV-RQLLDAKENN 227
V ++DGNG H R G ASH+GVL+N TIGV K+L + DG+ + V Q ++
Sbjct: 113 VFLLDGNGFFHIRRCGAASHLGVLSNTRTIGVAKSLIEIPEDGVKKTEVISQFKRLRKTG 172
Query: 228 NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQ 287
++ + A+ P KPIF+S GH SL+TA IVK K R+PEPI+
Sbjct: 173 GNELDIISTEKNEVLAKAVLYAPKVEKPIFVSAGHKCSLETAAKIVKGCTKTRIPEPIKM 232
Query: 288 ADIRSRDYLQK 298
AD SR L+K
Sbjct: 233 ADKWSRKELKK 243
>gi|67462366|ref|XP_647849.1| endonuclease V [Entamoeba histolytica HM-1:IMSS]
gi|56463395|gb|EAL42463.1| endonuclease V, putative [Entamoeba histolytica HM-1:IMSS]
Length = 239
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 130/244 (53%), Gaps = 17/244 (6%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW + Q K +I ED W L NT L +GG+D+SFS ++A
Sbjct: 4 QWEKYQILHSKDVILEDSHDWTL------NT---------LSRVGGLDISFSTNHQNLAI 48
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+VV + + + + + +PY+ GFL FRE V LL++ K++ YPQV++
Sbjct: 49 GCLVVCEYPSGKELLTLTCRKIITIPYISGFLGFREVEVYHELLNDCKEKYPELYPQVVL 108
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG A+H+GV ++ +IGV K + VDG+ + + + +
Sbjct: 109 VDGNGYYHPRRFGSATHVGVYCDIPSIGVAKTVLCVDGIGKKEINIITSQIKPGESTTVS 168
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
+G +RS ++ PI +S G+ +SL TAV+I K C +++PEPIR AD+ SR
Sbjct: 169 T--SNGEVLCEVIRSRGGSINPIIVSCGNKVSLSTAVIICKECCLHKIPEPIRLADLISR 226
Query: 294 DYLQ 297
L+
Sbjct: 227 KLLR 230
>gi|67476810|ref|XP_653952.1| endonuclease V [Entamoeba histolytica HM-1:IMSS]
gi|56470957|gb|EAL48566.1| endonuclease V, putative [Entamoeba histolytica HM-1:IMSS]
Length = 239
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 129/244 (52%), Gaps = 17/244 (6%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW Q K +I ED W L NT L +GG+D+SFS P++A
Sbjct: 4 QWENYQILHSKDVILEDSHDWTL------NT---------LLRVGGLDISFSTNHPNLAI 48
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+VV + + + + + +PY+ GFL FRE V LL++ K++ YPQV++
Sbjct: 49 GCLVVCEYPSGKELLTLTCRKIITIPYISGFLGFREVEVYHELLNDCKEKYPELYPQVVL 108
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG +H+GV ++ +IGV K + VDG+ + + + +
Sbjct: 109 VDGNGYYHPRRFGSETHVGVYCDIPSIGVAKTVLCVDGIGKKEINIITSQIKPGESTTVS 168
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
+G +RS ++ PI +S G+ +SL TAV+I K C +++PEPIR AD+ SR
Sbjct: 169 T--SNGEVLCEVIRSRGGSINPIIVSCGNKVSLSTAVIICKECCLHKIPEPIRLADLISR 226
Query: 294 DYLQ 297
L+
Sbjct: 227 KLLR 230
>gi|431908677|gb|ELK12269.1| Putative endonuclease FLJ39025 like protein [Pteropus alecto]
Length = 250
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 105/166 (63%), Gaps = 12/166 (7%)
Query: 133 LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIG 192
++ L PYVPGFLAFRE P L+ + ++++ H PQ GFG+A H+G
Sbjct: 1 MVSLTAPYVPGFLAFREGPFLVDAVRRLQEKEPHLSPQA------------GFGVACHLG 48
Query: 193 VLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDT 252
V +L +IGV K L VDGL ++ + + D PL GGSG+ G+A+RS +
Sbjct: 49 VHTDLPSIGVAKKLLQVDGLENNALHREKIRLLQAGGDTFPLTGGSGAVLGMALRSHDHS 108
Query: 253 LKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
KP+++SVGH +SL+ AV +++ C++R+PEP+RQADIRSRDY+++
Sbjct: 109 TKPLYVSVGHKMSLEAAVRLIRSCCRFRIPEPVRQADIRSRDYIRR 154
>gi|149054977|gb|EDM06794.1| rCG35491, isoform CRA_a [Rattus norvegicus]
Length = 295
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 104/157 (66%), Gaps = 1/157 (0%)
Query: 142 PGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIG 201
PG L F E P L+ L+ ++++ PQVL+VDGNG+LH RGFG+A H+GVL L +G
Sbjct: 55 PG-LRFPEVPFLVELVQRLQEKEPDLMPQVLLVDGNGVLHQRGFGVACHLGVLTELPCVG 113
Query: 202 VGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVG 261
V K L V+GL ++ + D PL+G SG+ G+A++S + KP+++SVG
Sbjct: 114 VAKKLLQVEGLENNASHKEKIVLLQAGGDTFPLIGNSGTVLGMALKSHDHSTKPLYVSVG 173
Query: 262 HCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
H ISL+ AV + C++R+PEPIRQADIRSR+Y+++
Sbjct: 174 HRISLEVAVRLTHRCCRFRIPEPIRQADIRSREYIRR 210
>gi|183235769|ref|XP_001914306.1| endonuclease V [Entamoeba histolytica HM-1:IMSS]
gi|169800357|gb|EDS88915.1| endonuclease V, putative [Entamoeba histolytica HM-1:IMSS]
Length = 239
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 130/244 (53%), Gaps = 17/244 (6%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW + Q K +I ED W L NT L +GG+D+SFS +++
Sbjct: 4 QWEKYQILHSKDVILEDSHDWTL------NT---------LSRVGGLDISFSTNHQNLSI 48
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+VV + + + + + +PY+ GFL FRE V LL++ K++ YPQV++
Sbjct: 49 GCLVVCEYPSGKELLTLTCRKIITIPYISGFLGFREVEVYHELLNDCKEKYPELYPQVVL 108
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG A+H+GV ++ +IGV K + VDG+ + + + +
Sbjct: 109 VDGNGYYHPRRFGSATHVGVYCDIPSIGVAKTVLCVDGIGKKEINIITSQIKPGESTTVS 168
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
+G +RS ++ PI +S G+ +SL TAV+I K C +++PEPIR AD+ SR
Sbjct: 169 T--SNGEVLCEVIRSRGGSINPIIVSCGNKVSLSTAVIICKECCLHKIPEPIRLADLISR 226
Query: 294 DYLQ 297
L+
Sbjct: 227 KLLR 230
>gi|440803358|gb|ELR24264.1| SAM domain (Sterile alpha motif) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 591
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 113/193 (58%), Gaps = 15/193 (7%)
Query: 126 IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGF 185
+VYE Y ++ L PY+PG+LAFRE P L+ L+D++++ + PQVL+VDGNG+LH GF
Sbjct: 4 VVYEIYKVVELTAPYIPGYLAFREVPALVGLIDHIRRNKPQYLPQVLLVDGNGVLHYGGF 63
Query: 186 GLASHIGVLANLTTIGVGKNLHHVDGLTHS-GVRQLLDAKENNNEDIIPLMGGSGSTWGV 244
G A +GV++ + TIGV K L VDGLT + + L + + + + G SG G
Sbjct: 64 GSACQLGVVSGIPTIGVAKKLLCVDGLTSEVDIDRWLARCQQLGREWVEIEGRSGQIHGA 123
Query: 245 AMR--------------STPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
+R + D P+F+S+GH +SL TAV + + +PEPI QAD+
Sbjct: 124 MIRPQSGRQTAAARSRGGSADPPTPLFVSLGHRVSLQTAVQVTLACIQRTMPEPIDQADL 183
Query: 291 RSRDYLQKHQSTC 303
RSR++++K C
Sbjct: 184 RSREHVRKLNQDC 196
>gi|340057290|emb|CCC51635.1| putative endonuclease V [Trypanosoma vivax Y486]
Length = 325
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 119/220 (54%), Gaps = 16/220 (7%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L++IGG D+SF + A C+VVL +L+ + PY+PG+LAFREA L
Sbjct: 97 LRHIGGCDVSFIPGSRT-AVACLVVLRYPSLERCSTLLHCCEVTEPYIPGYLAFREAEPL 155
Query: 154 LSLLDNMKKRANH--FYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
+ L + YPQ+L+VDG G+ HP GLASH+GVL ++ TIG KN VDG
Sbjct: 156 MELFRRARVELEQEGCYPQLLLVDGCGVHHPLRCGLASHLGVLLDIPTIGCAKNFMAVDG 215
Query: 212 LTHS--------GVRQLLDAKENNNED-----IIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
L+ G+R L + + + D IP++G SG W A K I+I
Sbjct: 216 LSRKVVHELFEEGLRTSLTSGDVHRGDSAGPFAIPIVGESGQLWCYAATPNCHVRKAIYI 275
Query: 259 SVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
S GH + + A ++ C+YRVPEPIR ADI SR +++K
Sbjct: 276 SPGHRVGFEEAAVLTLSVCRYRVPEPIRMADIISRTHVRK 315
>gi|19115244|ref|NP_594332.1| DNA repair endonuclease (predicted) [Schizosaccharomyces pombe
972h-]
gi|1723511|sp|Q10348.1|YDA6_SCHPO RecName: Full=Putative endonuclease C1F12.06c
gi|1217980|emb|CAA93810.1| DNA repair endonuclease (predicted) [Schizosaccharomyces pombe]
Length = 252
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/214 (36%), Positives = 133/214 (62%), Gaps = 13/214 (6%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLL-RLQVPYVPGFLAFREAPV 152
++Y+ G+D+SF K P A +V+ DL+ I+Y+DY + +L+ YVPGFL+FRE
Sbjct: 36 IRYVVGLDISFDKSSPK-AVSALVIYDLEQRMIIYKDYLCIEKLEEDYVPGFLSFREIKW 94
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
L LL+++ + F +++VDGNG+LHP GFGLA H+GVL NL +GV KN H GL
Sbjct: 95 YLPLLNHI---PHQFRIDIILVDGNGVLHPVGFGLACHLGVLLNLPVVGVAKNYLHCVGL 151
Query: 213 THS------GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
T S +++ + K ++ +I + S G A+ ++ ++ +P+++S+G+ ++L
Sbjct: 152 TESLDAHRETLKKHVLKKTTDHPILIHSIDQSSEILGAAVWTSSNSKRPVYVSIGNQMNL 211
Query: 267 DTAVMIVKM--TCKYRVPEPIRQADIRSRDYLQK 298
+ ++ +V+ + RVPEPIRQADI ++ L +
Sbjct: 212 EQSIQLVQKCSSSHSRVPEPIRQADIYAKFVLSQ 245
>gi|307103362|gb|EFN51623.1| hypothetical protein CHLNCDRAFT_140040 [Chlorella variabilis]
Length = 380
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 116/225 (51%), Gaps = 40/225 (17%)
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
A + VL LQ+++ + LRL VPY PG L FRE P L LL R PQ+
Sbjct: 124 AVAALAVLGYPDLQLLHLEVMELRLAVPYQPGLLGFREVPAYLELLRRAAARG--VRPQL 181
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL------------------- 212
L+VDG G+LHPR G ASH+GVL+ L T+GV K+L V+GL
Sbjct: 182 LLVDGFGVLHPRRCGSASHLGVLSGLPTVGVAKHLLRVEGLLPERAVRAAVAASGAAGEP 241
Query: 213 ---------------THSGVRQLL----DAKENNNEDIIPLMGGSGSTWGVAMRSTPDTL 253
+G Q L D++ + +PL G G G A+ + +
Sbjct: 242 GAAAAGAAYDACEPDAAAGEPQQLAGDSDSRGSRASSWLPLAGAGGEVLGAAVCAAGGSS 301
Query: 254 KPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
+PI++SVGH ISL TAV +V+ C++RVPEPIRQAD SR +Q+
Sbjct: 302 RPIYVSVGHRISLPTAVEVVRRCCRHRVPEPIRQADQHSRAEVQR 346
>gi|426346452|ref|XP_004040892.1| PREDICTED: endonuclease V isoform 1 [Gorilla gorilla gorilla]
Length = 237
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 127/259 (49%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D TW ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTETWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + + C++
Sbjct: 126 EKIRLLQTQGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTRCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADICSREHIRK 204
>gi|217967161|ref|YP_002352667.1| endonuclease V [Dictyoglomus turgidum DSM 6724]
gi|226730048|sp|B8DZX0.1|NFI_DICTD RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|217336260|gb|ACK42053.1| Deoxyribonuclease V [Dictyoglomus turgidum DSM 6724]
Length = 228
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 135/243 (55%), Gaps = 40/243 (16%)
Query: 56 TEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGC 115
++Q+EL K++I ED F KE L+YIGGVD S E G
Sbjct: 17 VKLQEELSKKIILEDKF--------------KE-----LRYIGGVDTSSLGEK---IVGI 54
Query: 116 IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVD 175
I +L +TL++V +L + PY+PGFL+FRE PV+L + +K + P +L+ D
Sbjct: 55 ITILVFKTLELVEISVALSEVNFPYIPGFLSFREGPVILRAWEKLKIK-----PDLLIFD 109
Query: 176 GNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLM 235
G G+ HPR G+ASHIG + ++ +IG KN+ G + D ++ + E I
Sbjct: 110 GQGIAHPRRLGIASHIGYVLDVPSIGCAKNI-------LVGFYKEPDKRKGSFEYIY--- 159
Query: 236 GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSRD 294
G G A+R T D +KP+F+S+GH ISL+T++ +I+K + KYR+PEP+R A + S+
Sbjct: 160 -HKGEIVGAAVR-TKDNVKPVFVSLGHKISLNTSIDIILKTSTKYRIPEPVRLAHLYSKR 217
Query: 295 YLQ 297
L
Sbjct: 218 MLN 220
>gi|357419294|ref|YP_004932286.1| Endonuclease V [Thermovirga lienii DSM 17291]
gi|355396760|gb|AER66189.1| Endonuclease V [Thermovirga lienii DSM 17291]
Length = 235
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 132/238 (55%), Gaps = 35/238 (14%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI- 111
+W ++Q+ L+ R++ ED F +L +Y+GG+D+S+S+ +
Sbjct: 18 KKWRDLQNYLRSRVVVEDLFVSSL------------------RYVGGIDVSYSQVGKNAK 59
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
A +VVLD+ T +V + + VPY+PGFL+FRE PV+L +D + P +
Sbjct: 60 AFSAVVVLDILTWSMVDLSVAWMESSVPYIPGFLSFREVPVILEAMDKLT-----VLPDI 114
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
+VDG G+ HPR GLASH+GVL ++ TIGV K+ + G TH + E +
Sbjct: 115 WLVDGAGIAHPRRVGLASHLGVLLDVPTIGVAKS--RLVG-THG------ELGEERGSRV 165
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC-KYRVPEPIRQA 288
L G+ G +RS + +KP+++S GH +S+++AV IV C +YR+PEPIR A
Sbjct: 166 PLLDDGTQEQIGWVLRSR-NAVKPLYVSPGHKVSMESAVKIVLACCTRYRLPEPIRTA 222
>gi|410256656|gb|JAA16295.1| hypothetical protein FLJ35220 [Pan troglodytes]
Length = 264
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADISSREHIRK 204
>gi|410298238|gb|JAA27719.1| hypothetical protein FLJ35220 [Pan troglodytes]
Length = 264
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADISSREHIRK 204
>gi|255088477|ref|XP_002506161.1| predicted protein [Micromonas sp. RCC299]
gi|226521432|gb|ACO67419.1| predicted protein [Micromonas sp. RCC299]
Length = 302
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 134/280 (47%), Gaps = 45/280 (16%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNST-TTNTSTKEEEEVLLKYIGGVDMSFSKE----- 107
+W ++DEL+ LI D + + + T N + K++ L+ + G+D+S+ +E
Sbjct: 17 RWRAVRDELRVGLIPRDDVDFAVDFADQTPNPNPKQKRP--LRLVAGLDVSYRREFIYDS 74
Query: 108 --DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
A C+ VL L + D+ + PYVPGFLAFRE P + +LL A
Sbjct: 75 THRAETAVACLAVLRFPELTPEWVDFEEFTVDAPYVPGFLAFRECPAMTTLLRRCPSGAK 134
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLD--- 222
P V++VDGNG LHP GFGLA H+GV + T+GV K+LH DGL R D
Sbjct: 135 ---PDVVLVDGNGALHPEGFGLACHVGVECGVPTVGVAKDLHAFDGLDAKSARAACDEIA 191
Query: 223 -----------------AKENNN------EDIIPLMGGSGSTWGVAM----RSTPDTLKP 255
A + D + L+G SG+T G AM S P
Sbjct: 192 ARGGGGGSKGVSKGVSKANPGHGGYPALWPDAVALVGASGTTHGAAMFGHEHSGDGAGCP 251
Query: 256 IFISVGHCISLDTAVMIVKMTCK--YRVPEPIRQADIRSR 293
I++S GH +SL TAV + + + PEPIR AD RSR
Sbjct: 252 IYVSGGHRVSLATAVAVARACRAPGRKTPEPIRVADARSR 291
>gi|410218942|gb|JAA06690.1| hypothetical protein FLJ35220 [Pan troglodytes]
Length = 264
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADISSREHIRK 204
>gi|403280409|ref|XP_003931711.1| PREDICTED: endonuclease V isoform 1 [Saimiri boliviensis
boliviensis]
Length = 258
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 123/251 (49%), Gaps = 56/251 (22%)
Query: 48 AQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKE 107
++ L+ W Q LK R++ D W + + L+ +GGVD+SF K
Sbjct: 10 SEETLSLWKREQARLKARVVDRDTEAWQRDPAFSG-----------LRRVGGVDVSFVKG 58
Query: 108 DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHF 167
D AC +VVL L+
Sbjct: 59 DSVRACASLVVLSYPELE------------------------------------------ 76
Query: 168 YPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENN 227
VL+VDGNG+LH +GFG+A H+GVL +L +GV K L VDGL + + +
Sbjct: 77 ---VLLVDGNGVLHHQGFGMACHLGVLTDLPCVGVAKKLLQVDGLENDALHKEKIRLLQA 133
Query: 228 NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQ 287
D PL+GGSG+ G+A++S + +P+++SVGH +SL+ AV + CK+R+PEP+RQ
Sbjct: 134 GGDSFPLLGGSGTVLGMALKSHDRSTRPLYVSVGHKMSLEAAVRLTCCCCKFRIPEPVRQ 193
Query: 288 ADIRSRDYLQK 298
AD SR++++K
Sbjct: 194 ADFCSREHIRK 204
>gi|154345878|ref|XP_001568876.1| putative endonuclease V [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134066218|emb|CAM44008.1| putative endonuclease V [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 395
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 126/223 (56%), Gaps = 12/223 (5%)
Query: 85 STKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGF 144
ST + L ++GGVD+SF + C+ +L ++++V L+ PYV GF
Sbjct: 162 STFARQLPALTFVGGVDISFIPGT-NDGVACLAILRYPSMELVKTYLHRCTLREPYVSGF 220
Query: 145 LAFREAPVLLSLLDNMKKR--ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGV 202
L+FRE + L+D ++ PQVL+VDGNG+LHPR GLA+H+G++ ++ TIG
Sbjct: 221 LSFREIQPVCELIDAVRAELLETQTLPQVLVVDGNGVLHPRRCGLATHLGIVLDIPTIGC 280
Query: 203 GKNLHHVDGLTHSGVRQLL------DAKENNNEDIIPLMGGSGST--WGVAMRSTPDTLK 254
K + VDGL V L ++ ++ I+PL+G S T +G A+ + +++K
Sbjct: 281 SKKMLRVDGLGRDAVETALATLSEAESSTSSLPCIVPLLGTSLPTQLYGYAVHNHLNSVK 340
Query: 255 P-IFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYL 296
I++S GHC+ A +V +YR+PEPIR AD+ SR Y+
Sbjct: 341 KCIYVSPGHCVGFAVATALVITMLRYRIPEPIRAADLGSRAYI 383
>gi|410329403|gb|JAA33648.1| hypothetical protein FLJ35220 [Pan troglodytes]
Length = 264
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADISSREHIRK 204
>gi|257467548|ref|NP_001158109.1| endonuclease V isoform 2 [Homo sapiens]
Length = 237
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADICSREHIRK 204
>gi|397522250|ref|XP_003831190.1| PREDICTED: endonuclease V isoform 1 [Pan paniscus]
Length = 264
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLTFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADISSREHIRK 204
>gi|119610015|gb|EAW89609.1| hypothetical protein FLJ35220, isoform CRA_g [Homo sapiens]
Length = 257
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADICSREHIRK 204
>gi|26351159|dbj|BAC39216.1| unnamed protein product [Mus musculus]
Length = 220
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 91/130 (70%)
Query: 169 PQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNN 228
PQV++VDGNG+LH RGFG+A H+GVL L IGV K L VDGL ++ + +
Sbjct: 2 PQVVLVDGNGVLHQRGFGVACHLGVLTELPCIGVAKKLLQVDGLENNALHKEKIVLLQAG 61
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQA 288
D PL+G SG+ G+A+RS + KP+++SVGH ISL+ AV + C++R+PEPIRQA
Sbjct: 62 GDTFPLIGSSGTVLGMALRSHDHSTKPLYVSVGHRISLEVAVRLTHHCCRFRIPEPIRQA 121
Query: 289 DIRSRDYLQK 298
DIRSR+Y+++
Sbjct: 122 DIRSREYIRR 131
>gi|261332754|emb|CBH15749.1| endonuclease V, putative [Trypanosoma brucei gambiense DAL972]
Length = 316
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 125/231 (54%), Gaps = 28/231 (12%)
Query: 93 LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+L+++GGVD+SF + + A C+ V++ ++++ ++ PY+ +LAFREA
Sbjct: 87 ILRHVGGVDISFIQGGDT-AVACLAVMEYPSMKVCRTFVQRCEVKEPYITSYLAFREAGP 145
Query: 153 LLSLLDNMKKR--ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
L+ L+++++ ++PQ+L+VDG G+ HP GLASH+GV+ ++ T+G K +D
Sbjct: 146 LVQLIESVRDELFEEAYFPQLLLVDGCGVHHPLRCGLASHLGVVLDIPTVGCAKKFLSID 205
Query: 211 GLTHSGVRQLLDAKENNNEDI---------------------IPLMGGSGSTWGVAMRST 249
G+T R +DA+ + +P++G SG WG A
Sbjct: 206 GIT----RDSMDARFAEEHTVASRRFEGTYLSSSSGLCEACFVPIIGESGRLWGYAATPN 261
Query: 250 PDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
PIFIS G+ + A + CKYRVPEPIR AD+ SR+++++ Q
Sbjct: 262 RRVKNPIFISPGNRVGYAEAAALAVSMCKYRVPEPIRAADLHSREFIRRIQ 312
>gi|303274839|ref|XP_003056734.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461086|gb|EEH58379.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 220
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 119/216 (55%), Gaps = 14/216 (6%)
Query: 94 LKYIGGVDMSF--SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
L IGGVD S+ ++ D ++A C+ VL +L+ V D+ YVPG LA RE P
Sbjct: 12 LTLIGGVDASYPATETDDAVAVACLAVLSFPSLETVRLDFEPFAPAAEYVPGRLADRELP 71
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
L+LL ++ PQ + VDGNG+LHP FG+A +GV A TIGV KNL VDG
Sbjct: 72 PYLALL---RRCPRPLAPQCVFVDGNGVLHPERFGIACRLGVDAATPTIGVAKNLLRVDG 128
Query: 212 LTHSGVRQLLDAKENNNEDI--IPLMGGSGSTWGVAMRS---TPDTLKPIFISVGHCISL 266
+ + ++ + D+ + L+ SG+ GVA+ KP+++S G + L
Sbjct: 129 VDARARSK----RDRDASDVGEVELVDDSGTVVGVALSGHDVAGVVTKPVYVSAGAGMDL 184
Query: 267 DTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQST 302
TA + + ++RVPEPIR AD+ SR +L++HQ
Sbjct: 185 ATATALTRACSRHRVPEPIRAADVASRAWLREHQGA 220
>gi|332263906|ref|XP_003280990.1| PREDICTED: endonuclease V isoform 2 [Nomascus leucogenys]
Length = 237
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEASGGPPEETLSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P+++SVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYVSVGHKMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADICSREHIRK 204
>gi|402901297|ref|XP_003913587.1| PREDICTED: endonuclease V isoform 1 [Papio anubis]
Length = 263
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/247 (33%), Positives = 122/247 (49%), Gaps = 56/247 (22%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q +LK R++ D W + + L+ +GGVD+SF K D
Sbjct: 14 LSLWKREQAQLKSRIVDRDTEAWQRDPAFSG-----------LRRVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L+ V
Sbjct: 63 ACASLVVLSYPELE---------------------------------------------V 77
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + + D
Sbjct: 78 LLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDS 137
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++ +PEP+RQADI
Sbjct: 138 FPLLGDSGTVLGMALRSHDRSTRPLYISVGHKMSLEAAVRLTCCCCRFWIPEPVRQADIC 197
Query: 292 SRDYLQK 298
SR++++K
Sbjct: 198 SREHIRK 204
>gi|257467550|ref|NP_001158110.1| endonuclease V isoform 3 [Homo sapiens]
gi|40555767|gb|AAH64545.1| FLJ35220 protein [Homo sapiens]
gi|119610021|gb|EAW89615.1| hypothetical protein FLJ35220, isoform CRA_l [Homo sapiens]
gi|312152152|gb|ADQ32588.1| hypothetical protein FLJ35220 [synthetic construct]
Length = 264
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADICSREHIRK 204
>gi|289548673|ref|YP_003473661.1| deoxyribonuclease V [Thermocrinis albus DSM 14484]
gi|289182290|gb|ADC89534.1| Deoxyribonuclease V [Thermocrinis albus DSM 14484]
Length = 218
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 127/239 (53%), Gaps = 38/239 (15%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS--KEDP 109
L EIQ + +R++ ED F K+ ++++GG+D++F KE P
Sbjct: 3 LQHLEEIQRDCAQRVVKEDLF--------------KD-----VRWVGGIDLTFESIKETP 43
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
+ A C+VV+ L+ L+ VY + + PY+P FLAFRE P++L L + K + P
Sbjct: 44 TKAWACLVVVQLKDLKPVYTEVVEGTVDFPYIPTFLAFRELPLMLRLYEKAKIK-----P 98
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
V ++DG G+ HPRG G+ASH GV + TIGV K + + +
Sbjct: 99 DVFLIDGQGVAHPRGCGIASHFGVETDSVTIGVAK----------TKLWGVYREPSPERG 148
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQA 288
PL+ GS GVA+R+ T P+F+SVGH ISL TA+ IV T +R+PEPIR A
Sbjct: 149 SFSPLLY-RGSVIGVALRTKAKT-APVFVSVGHKISLKTAIDIVLKTSVFRIPEPIRLA 205
>gi|332263904|ref|XP_003280989.1| PREDICTED: endonuclease V isoform 1 [Nomascus leucogenys]
Length = 264
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 121/247 (48%), Gaps = 56/247 (22%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK ++ D W ++ L+ +GGVD+SF K D
Sbjct: 14 LSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L+ V
Sbjct: 63 ACASLVVLSFPELE---------------------------------------------V 77
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + + D
Sbjct: 78 LLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDS 137
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
PL+G SG+ G+A+RS + +P+++SVGH +SL+ AV + C++R+PEP+RQADI
Sbjct: 138 FPLLGDSGTVLGMALRSHDRSTRPLYVSVGHKMSLEAAVRLTCCCCRFRIPEPVRQADIC 197
Query: 292 SRDYLQK 298
SR++++K
Sbjct: 198 SREHIRK 204
>gi|21751158|dbj|BAC03912.1| unnamed protein product [Homo sapiens]
Length = 237
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 125/259 (48%), Gaps = 56/259 (21%)
Query: 40 ALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
AL + + L+ W Q LK ++ D W ++ L+ +GG
Sbjct: 2 ALEAAGGPPEETLSLWKWEQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGG 50
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+SF K D AC +VVL L+
Sbjct: 51 VDVSFVKGDSVRACASLVVLSFPELE---------------------------------- 76
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
VL+VDGNG+LH RGFG+A H+GVL +L +GV K L VDGL ++ + +
Sbjct: 77 -----------VLLVDGNGVLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHK 125
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY 279
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++
Sbjct: 126 EKIRLLQTRGDSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRF 185
Query: 280 RVPEPIRQADIRSRDYLQK 298
R+PEP+RQADI SR++++K
Sbjct: 186 RIPEPVRQADICSREHIRK 204
>gi|71747744|ref|XP_822927.1| endonuclease V [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70832595|gb|EAN78099.1| endonuclease V, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 316
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 124/231 (53%), Gaps = 28/231 (12%)
Query: 93 LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+L+++GGVD+SF + + A C+ V++ ++++ ++ PY+ +LAFREA
Sbjct: 87 ILRHVGGVDISFIQGGDT-AVACLAVMEYPSMKVCRTFVQRCEVKEPYITSYLAFREAGP 145
Query: 153 LLSLLDNMKKR--ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
L+ L+++++ +PQ+L+VDG G+ HP GLASH+GV+ ++ T+G K +D
Sbjct: 146 LVQLIESVRDELFEEACFPQLLLVDGCGVHHPLRCGLASHLGVVLDIPTVGCAKKFLSID 205
Query: 211 GLTHSGVRQLLDAKENNNEDI---------------------IPLMGGSGSTWGVAMRST 249
G+T R +DA+ + +P++G SG WG A
Sbjct: 206 GIT----RDSMDARFAEEHTVASRRFEGTYLSSSSGVCEACFVPIIGESGRLWGYAATPN 261
Query: 250 PDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
PIFIS G+ + A + CKYRVPEPIR AD+ SR+++++ Q
Sbjct: 262 RRVKNPIFISPGNRVGYAEAAALAVSMCKYRVPEPIRAADLHSREFIRRIQ 312
>gi|337285641|ref|YP_004625114.1| Deoxyribonuclease V [Thermodesulfatator indicus DSM 15286]
gi|335358469|gb|AEH44150.1| Deoxyribonuclease V [Thermodesulfatator indicus DSM 15286]
Length = 225
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 118/199 (59%), Gaps = 20/199 (10%)
Query: 93 LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
L + IGG D+S+ +P A G +VV DL+ +++ E Y++ ++ PY+PGFL+FRE PV
Sbjct: 27 LPRLIGGADVSYI--EPGYAIGAVVVYDLEKGKVIEETYAVEKVTFPYIPGFLSFREVPV 84
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
L +K + P+VL+VDG G+LHPRG GLASH+G+ N+ TIGV K +
Sbjct: 85 LKKAFAKLKIK-----PEVLLVDGQGILHPRGLGLASHLGLELNIPTIGVAKKPLIGE-- 137
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+ E+ P+ +G GV +R T +KP+F+S GH I L++A+ +
Sbjct: 138 --------FELPEDKPGAFCPIF-INGQVKGVVLR-TRKGVKPVFVSPGHLIDLESALKV 187
Query: 273 VKMTCK-YRVPEPIRQADI 290
VK + YR+PEP+R+A +
Sbjct: 188 VKASLSGYRIPEPLRKAHL 206
>gi|206901946|ref|YP_002250488.1| endonuclease V [Dictyoglomus thermophilum H-6-12]
gi|226730047|sp|B5YD80.1|NFI_DICT6 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|206741049|gb|ACI20107.1| endonuclease V [Dictyoglomus thermophilum H-6-12]
Length = 228
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 131/243 (53%), Gaps = 40/243 (16%)
Query: 56 TEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGC 115
+Q E+ +++I ED F L+Y+GGVD S S ED G
Sbjct: 17 VRLQKEISEKIIKEDAFKN-------------------LRYVGGVDTS-SIEDK--IAGV 54
Query: 116 IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVD 175
IVVL+ TL+++ + ++ PY+PGFL+FRE P++L +N+K + P +L+ D
Sbjct: 55 IVVLEFNTLEVLEVSIEISQVNFPYIPGFLSFREGPIILKAWENLKIK-----PDLLIFD 109
Query: 176 GNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLM 235
G G+ HPR G+ASH+G + ++ +IG K + GV + D K + E I
Sbjct: 110 GQGIAHPRRLGIASHVGYVLDVPSIGCAKKI-------LVGVYKEPDKKRGSFEYIYI-- 160
Query: 236 GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSRD 294
G +R T D +KP+F+S+GH ISL T++ +I+K + KYR+PEP+R A I S+
Sbjct: 161 --DNEIVGAVVR-TKDNVKPVFVSLGHKISLSTSIEIILKTSTKYRLPEPVRLAHIYSKK 217
Query: 295 YLQ 297
L
Sbjct: 218 ALN 220
>gi|119610010|gb|EAW89604.1| hypothetical protein FLJ35220, isoform CRA_c [Homo sapiens]
Length = 250
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 118/240 (49%), Gaps = 56/240 (23%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
Q LK ++ D W ++ L+ +GGVD+SF K D AC +VV
Sbjct: 8 QARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGGVDVSFVKGDSVRACASLVV 56
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
L L+ VL+VDGNG
Sbjct: 57 LSFPELE---------------------------------------------VLLVDGNG 71
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGS 238
+LH RGFG+A H+GVL +L +GV K L VDGL ++ + + D PL+G S
Sbjct: 72 VLHHRGFGVACHLGVLTDLPCVGVAKKLLQVDGLENNALHKEKIRLLQTRGDSFPLLGDS 131
Query: 239 GSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
G+ G+A+RS + +P++ISVGH +SL+ AV + C++R+PEP+RQADI SR++++K
Sbjct: 132 GTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRFRIPEPVRQADICSREHIRK 191
>gi|328872749|gb|EGG21116.1| putative endonuclease V [Dictyostelium fasciculatum]
Length = 558
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 43/282 (15%)
Query: 43 SPDPAAQAQLNQWTEIQD------ELKKRLITEDFFTWN------LPNSTTTNTSTK-EE 89
+PD Q L+ WT+ +D EL + + W L TN K
Sbjct: 285 APDSTLQVDLSNWTKERDNNGRPTELFGQAMINQKNIWKNEQIQLLSKLDKTNRVKKLPN 344
Query: 90 EEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFRE 149
++ +KY+ G D+SF+K + AC IVV++ +L++VYE Y +++L PY+ G+LA RE
Sbjct: 345 GQLNIKYVAGSDISFAKGNKIDACASIVVMEYPSLKVVYESYKMIKLTQPYIAGYLAMRE 404
Query: 150 APVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHV 209
L++L ++K+ F P +++VDGNG+ H RG GLA H+G+L + T+GV KNL
Sbjct: 405 VDHLVALWQSLKRTHPQFTPDIMVVDGNGVNHMRGMGLACHLGILIDCPTLGVAKNLLVC 464
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKP-------------I 256
G+T + + D +T G A++ D +
Sbjct: 465 HGITEEYLDEQFDY----------------ATLGEAVQMKSDQTNELLGYCTYNNENERL 508
Query: 257 FISVGHCISLDTAVMIVKMTCK-YRVPEPIRQADIRSRDYLQ 297
+IS GH I TA+ + + T K + +PEP AD SR++L+
Sbjct: 509 YISPGHKIDAYTALQVYEQTTKTHNLPEPTYIADHYSREFLR 550
>gi|145596289|ref|YP_001160586.1| deoxyribonuclease V [Salinispora tropica CNB-440]
gi|145305626|gb|ABP56208.1| Endonuclease V [Salinispora tropica CNB-440]
Length = 199
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 111/200 (55%), Gaps = 19/200 (9%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
G+D+S++K + C VV++L++L + L + PYVPG LAFREAP+LL L
Sbjct: 2 GLDVSYAKATNQV-CAAAVVIELESLAVAEVATVLGEVAFPYVPGLLAFREAPILLEALQ 60
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVR 218
+ P+VL+ DG G+ HPR FGLA H+GVL L + GV K D +
Sbjct: 61 GLAHE-----PEVLVCDGYGIAHPRRFGLACHLGVLTGLPSFGVAKTSFIADFVN----- 110
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTC 277
+ PL G G T G A+R T D +KP+F+SVGH I LD A M +++
Sbjct: 111 -----PDRRRGAWSPLKEG-GETLGRAVR-TQDGVKPVFVSVGHRIGLDQACDMTLRLCP 163
Query: 278 KYRVPEPIRQADIRSRDYLQ 297
+YR+PE RQAD+ SR L+
Sbjct: 164 RYRIPEATRQADVASRRVLR 183
>gi|337287716|ref|YP_004627188.1| Endonuclease V [Thermodesulfobacterium sp. OPB45]
gi|334901454|gb|AEH22260.1| Endonuclease V [Thermodesulfobacterium geofontis OPF15]
Length = 219
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 113/199 (56%), Gaps = 23/199 (11%)
Query: 94 LKYIGGVDMSF--SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
+K +GG+D++F SKE+P+ A CIV++ L TL+ +Y+ + PY+P FLAFRE P
Sbjct: 26 IKTVGGIDVTFESSKENPTKAWACIVIISLDTLKPIYQKIIEDIVDFPYIPTFLAFRELP 85
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
++ + K + P V+ +DG G+ HPRG G+ASH GV T+GV K
Sbjct: 86 LMKRVYTEAKSK-----PDVIFIDGQGISHPRGCGIASHFGVEVGAVTVGVAK------- 133
Query: 212 LTHSGVRQLLDAKENNNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
++LL E E + +G GV +R T D +KP+F+S+GH ISL+ A
Sbjct: 134 ------KKLLGNYEPPKETRGSYSYLIYNGEVIGVVLR-TKDKVKPLFVSIGHKISLEKA 186
Query: 270 VMIVKMTCKYRVPEPIRQA 288
+ +V T YR+PEP+R A
Sbjct: 187 IELVLRTSIYRIPEPLRLA 205
>gi|288818077|ref|YP_003432425.1| deoxyribonuclease V [Hydrogenobacter thermophilus TK-6]
gi|384128842|ref|YP_005511455.1| Deoxyribonuclease V [Hydrogenobacter thermophilus TK-6]
gi|288787477|dbj|BAI69224.1| deoxyribonuclease V [Hydrogenobacter thermophilus TK-6]
gi|308751679|gb|ADO45162.1| Deoxyribonuclease V [Hydrogenobacter thermophilus TK-6]
Length = 217
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 127/255 (49%), Gaps = 49/255 (19%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS--KED 108
++ + +IQ E K++I D F E L+ +GG+D++F K +
Sbjct: 2 EIEELKKIQQECAKKVIQRDDF------------------EKLIT-VGGIDLTFEDIKSN 42
Query: 109 PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFY 168
P+ A IV++D+ TL+ VYED + PY+P FLAFRE P++L L +K +
Sbjct: 43 PTKAWASIVIVDINTLKPVYEDVVEGLVDFPYIPTFLAFRELPLMLELYQKIKIK----- 97
Query: 169 PQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKE 225
P V +DG G+ HPRG G+ASH GV N +IGV K ++ + G L K
Sbjct: 98 PDVYFIDGQGVAHPRGCGIASHFGVATNSVSIGVAKTKLFGYYKEPEEKRGSYSYLTYK- 156
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPI 285
GS G +R T D +P+++SVGH ISL A+ +V T YR+PEP
Sbjct: 157 -------------GSIVGAVLR-TKDRTEPVYVSVGHRISLKKAIELVLRTSIYRIPEPT 202
Query: 286 RQA-----DIRSRDY 295
R A +R R Y
Sbjct: 203 RLAHNLLQKVRKRLY 217
>gi|411118613|ref|ZP_11390994.1| deoxyinosine 3'endonuclease (endonuclease V) [Oscillatoriales
cyanobacterium JSC-12]
gi|410712337|gb|EKQ69843.1| deoxyinosine 3'endonuclease (endonuclease V) [Oscillatoriales
cyanobacterium JSC-12]
Length = 237
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 122/237 (51%), Gaps = 38/237 (16%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
Q +Q EL+ ++I D F E V +Y+ GVD+ F E +I
Sbjct: 14 EQAIALQQELQSQIILTDQF-----------------EPV--QYVAGVDVGFESEG-TIT 53
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
I VL L LQ+V + + PY+PG L+FRE P +L L N+ P +L
Sbjct: 54 RAAIAVLTLADLQLVDQAIARRPTTFPYIPGLLSFREVPAVLDALANLTT-----LPDLL 108
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
+VDG G HPR FG+A H+G+L NL TIGV K+L G L + + + +I
Sbjct: 109 LVDGQGTAHPRRFGIACHLGLLTNLPTIGVAKSL-------LVGRYAELGDERGSQQPLI 161
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
G T GVA+R+ P T KP+FIS GH +SL+TAV ++ T KYR+PE R A
Sbjct: 162 ----YKGETIGVALRTRPRT-KPLFISPGHRVSLETAVAFTLRCTTKYRLPETTRHA 213
>gi|66819958|ref|XP_643636.1| hypothetical protein DDB_G0275469 [Dictyostelium discoideum AX4]
gi|60471529|gb|EAL69485.1| hypothetical protein DDB_G0275469 [Dictyostelium discoideum AX4]
Length = 538
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 126/248 (50%), Gaps = 25/248 (10%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
Q+ L+ RLI W+ N E +K +GG D+SF KE A IVV
Sbjct: 298 QNILRNRLI------WD-----NVNGLNASENNCNIKLVGGCDISFPKESKVDAVASIVV 346
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
L+ + ++VYE Y +++L PYV G+LAFRE P L L + M K+ F P ++++DGNG
Sbjct: 347 LEYPSCRVVYESYKMVKLTEPYVAGYLAFREVPHFLDLWNAMIKKFPQFKPDIMILDGNG 406
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGS 238
+ H R G A+H G++AN+ TIGV K L G+T + + L +K N E I
Sbjct: 407 VNHQRSVGAATHFGIIANVPTIGVAKTLLVAKGITPEFIEEGL-SKSNTVEMID--RNDK 463
Query: 239 GSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV---------KMTCKYRVPEPIRQAD 289
G A R+ + I++S GH + T++ +V K +PEP QAD
Sbjct: 464 NRIIGHAFRNNDGDI--IYVSPGHKMDAHTSLQLVHKCLTTQIGKQVFHRPIPEPTFQAD 521
Query: 290 IRSRDYLQ 297
SR +++
Sbjct: 522 HLSRVFIK 529
>gi|338730659|ref|YP_004660051.1| enodnuclease V [Thermotoga thermarum DSM 5069]
gi|335365010|gb|AEH50955.1| Endonuclease V [Thermotoga thermarum DSM 5069]
Length = 225
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 124/209 (59%), Gaps = 23/209 (11%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
KEE+ ++Y+ GVD+SF +P++ IVV+DL + IV + ++ Y+PG LA
Sbjct: 33 KEEK---IRYVAGVDLSFP--EPNLGYAVIVVIDLFNMSIVENVAAKEKVVFDYIPGLLA 87
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE PV L +N+K + P +++ DG+G+ HPRG G+ASH+G+ NL TIGV K+
Sbjct: 88 FREGPVFLKAWENLKTK-----PNLVVFDGHGIAHPRGLGIASHMGLWINLPTIGVAKS- 141
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
+ G + G++Q AK + +PL+ SG+ G+ +R T + PIF+S GH L
Sbjct: 142 -KLYGF-YKGLQQ---AKWSE----VPLLDPSGNQIGIVIR-TKENADPIFVSPGHLCDL 191
Query: 267 DTAVMIVKMTC--KYRVPEPIRQADIRSR 293
D+A IVK C R+PEP R A + ++
Sbjct: 192 DSASKIVKKMCLENNRLPEPTRLAHLLTQ 220
>gi|85858635|ref|YP_460837.1| endonuclease V [Syntrophus aciditrophicus SB]
gi|85721726|gb|ABC76669.1| endonuclease V [Syntrophus aciditrophicus SB]
Length = 273
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 114/204 (55%), Gaps = 19/204 (9%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
E V + I G D+S+S+ D G +V+L ++I+ S+ ++ PYVPG L+F
Sbjct: 50 ESPPVEIHSIAGADISYSRGDDRFF-GAVVILSWPAMEILEIASSVAQVPFPYVPGLLSF 108
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE PVLL D +K+R P +++ DG G+ HPRG GLASH+G+ NL TIG K
Sbjct: 109 REGPVLLKAFDKLKQR-----PDIIIFDGQGIAHPRGIGLASHLGLFLNLPTIGCAKT-- 161
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
G + +D + + ++ GS G +R T + ++P+F+S GH ISL
Sbjct: 162 -----KLVGTFEEVDQERGCHTNLY----HKGSVIGAVVR-TKNRVRPVFVSQGHRISLP 211
Query: 268 TAVMIVKMTCK-YRVPEPIRQADI 290
AV IV C+ YR+PEP+RQA +
Sbjct: 212 RAVEIVLNCCRGYRLPEPVRQAHL 235
>gi|269925987|ref|YP_003322610.1| Deoxyribonuclease V [Thermobaculum terrenum ATCC BAA-798]
gi|269789647|gb|ACZ41788.1| Deoxyribonuclease V [Thermobaculum terrenum ATCC BAA-798]
Length = 231
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 122/202 (60%), Gaps = 26/202 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+GG D+SF P+ A +V++ T++ + E + + +PY+PG LAFREAPV+L
Sbjct: 49 VGGFDLSF----PNNARAAAIVIESSTMETIEEILEDMPVTMPYIPGLLAFREAPVILRA 104
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+++K + P V+M+DG+G HPR FG+A H+G++ +IGV K+L
Sbjct: 105 YNSLKAK-----PDVIMIDGHGRAHPRRFGIACHVGLILRKPSIGVAKSL---------- 149
Query: 217 VRQLLDAKE--NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
+ +A+E +N D P+ G+ G A+R+ P KP+++SVG+ ISL+ AV +++
Sbjct: 150 --LIGNAEEPGDNKGDWNPITLGN-EVLGAAVRTKPGA-KPVYVSVGNLISLEQAVELVL 205
Query: 274 KMTCKYRVPEPIRQADIRSRDY 295
KMT KYR+PEP R+A + + Y
Sbjct: 206 KMTTKYRLPEPTRRAHMLASRY 227
>gi|325183177|emb|CCA17634.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 156
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/135 (49%), Positives = 88/135 (65%), Gaps = 4/135 (2%)
Query: 168 YPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENN 227
+ VL+VDGNG+LHPRGFG+A H+GV + TIGV K+ HVDGLT + V Q +
Sbjct: 11 WRDVLLVDGNGMLHPRGFGIACHLGVELEIPTIGVAKSFFHVDGLTKTRVIQRM---RKQ 67
Query: 228 NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQ 287
ED+ L G SG TWG A +T PI++SVGH ISL T++ IVK+ YR PEPIRQ
Sbjct: 68 GEDVFLLQGDSGRTWGAAC-CFKNTTNPIYVSVGHRISLKTSIEIVKVCSLYREPEPIRQ 126
Query: 288 ADIRSRDYLQKHQST 302
AD+ SR ++ ++
Sbjct: 127 ADLGSRREIKAWEAA 141
>gi|213406417|ref|XP_002173980.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212002027|gb|EEB07687.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 268
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 120/216 (55%), Gaps = 15/216 (6%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLL-RLQVPYVPGFLAFREAPVL 153
+ I G+D+SF K A IV+ D T ++V+ + R++ PY+PGFL+FREA
Sbjct: 53 RIIAGLDISFKKSSEE-AAAAIVLWDSHTQKVVWRSAIWIDRMEEPYIPGFLSFREAKWY 111
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+LL+++ + P+V++VDGNG LHP FGLA HIGV+ N TIGV KN L
Sbjct: 112 RTLLNSIPQDVPQ--PEVIIVDGNGRLHPVLFGLACHIGVMTNKPTIGVAKNYFCAPSLN 169
Query: 214 HS------GVRQLLDAKENNNE---DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCI 264
++Q L + +P +G G+A+ ++P +P+++S+GH I
Sbjct: 170 EDLKAHRVHIQQHLSTMGPQHPMPLRALPEIGYGDKPIGMAVWTSPHATRPVYVSIGHKI 229
Query: 265 SLDTAVMIVKMTCKY--RVPEPIRQADIRSRDYLQK 298
SL AV +V + RVPEP+R ADI +++ + K
Sbjct: 230 SLPAAVAVVTLCSGIHSRVPEPVRLADIYAKEVIAK 265
>gi|256425422|ref|YP_003126075.1| deoxyribonuclease V [Chitinophaga pinensis DSM 2588]
gi|256040330|gb|ACU63874.1| Deoxyribonuclease V [Chitinophaga pinensis DSM 2588]
Length = 230
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 130/244 (53%), Gaps = 37/244 (15%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
+ ++Q+EL+ ++I D LP +K I GVD+ + KE IA
Sbjct: 8 QEAIQLQEELRPKVIRTD----ELPAH--------------IKLIAGVDVEYDKESDLIA 49
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
G V+LD TL++V +++ PY+PG +FRE PVLL +++R P ++
Sbjct: 50 -GAFVLLDFNTLEVVEVATHCMQVTFPYIPGLFSFREMPVLLEAWKKLERR-----PDLV 103
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
+ DG G+ HPR FGLA H+GVL ++ +G GK G + L A+ +
Sbjct: 104 ICDGQGIAHPRRFGLACHMGVLLDVPALGCGKT-------RLFGKYEELAAERGA---VS 153
Query: 233 PLMG-GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA-VMIVKMTCKYRVPEPIRQADI 290
PL+ +G G A+R T + + P+F+S GH +SLDTA M++KM+ YR+PE R+AD
Sbjct: 154 PLLAEDNGEHIGNALR-TQNGISPVFVSTGHKVSLDTATAMVLKMSVTYRLPETTRKADH 212
Query: 291 RSRD 294
R+
Sbjct: 213 YGRE 216
>gi|402221918|gb|EJU01986.1| hypothetical protein DACRYDRAFT_89016 [Dacryopinax sp. DJM-731 SS1]
Length = 331
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 149/329 (45%), Gaps = 76/329 (23%)
Query: 28 SYMENYCEEEREALASPDPAAQAQLNQWTEIQDELKKRLI----TEDFFT---------- 73
+Y EE +E +A +WT Q L+K ++ DFF
Sbjct: 6 AYTTRMLEEHKELIA-----------EWTREQHSLRKSVLFVDHELDFFVPTSGSDFQHE 54
Query: 74 -------WNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSK--EDPS-------------- 110
+++P N E LKY+GG+D+SF + ED S
Sbjct: 55 MSVVQHDFDVPEVHQVNIG--EPLVTALKYVGGLDISFVQQSEDSSGMTESEESQSHVVV 112
Query: 111 -----IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMK---- 161
A +VV++ +L++ + + + VPY+P F ++REAPV L L++ ++
Sbjct: 113 TENGPNAYATLVVVEYPSLELRHTITHAIHMDVPYIPTFFSYREAPVYLRLINALREELA 172
Query: 162 -KRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDGL------ 212
+ +PQV ++DGNG LH R G+AS +GV AN+ TIGV KN HH D L
Sbjct: 173 ARNEQDQFPQVFLIDGNGRLHVRETGVASVVGVQANVPTIGVAKNYLPHHQDSLQGQPWA 232
Query: 213 --------THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCI 264
T G+R+++ ++ L G ++ A P P+F+S GH +
Sbjct: 233 TSTAHWRSTQHGMREMIRRVLLSHGSWFGLYDAKGDSYAGAALIPPTLKAPLFVSPGHRV 292
Query: 265 SLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
LDTA+ + +Y++PEPIR AD SR
Sbjct: 293 CLDTAIRVTLALGRYKIPEPIRLADKISR 321
>gi|296439286|sp|O66824.3|NFI_AQUAE RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
Length = 222
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 122/240 (50%), Gaps = 40/240 (16%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSK--EDP 109
L + +IQ E K++I D F E+ E IGG+D++F K E+P
Sbjct: 6 LEKLKKIQLECAKKVIARDDF---------------EKVET----IGGMDLTFEKINENP 46
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
+ A +VV++L+TL+ VY+ + PY+P FLAFRE P+LL L + K + P
Sbjct: 47 TRAWASLVVVELKTLKPVYQHVVKDIVDFPYIPTFLAFREMPLLLKLYETAKVK-----P 101
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENN-N 228
V +DG G+ HPRG G+ASH GV T+GV K+ + AKE
Sbjct: 102 DVYFIDGQGIAHPRGCGIASHFGVETGEVTVGVAKS------------KLFGYAKEPAPQ 149
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQA 288
+ G G +R T D P+++SVGH ISL TA+ +V T KYRVPEP R A
Sbjct: 150 RGSYTYLKYKGKIIGAVVR-TKDNTAPVYVSVGHRISLKTAIDLVLKTSKYRVPEPTRLA 208
>gi|330802868|ref|XP_003289434.1| hypothetical protein DICPUDRAFT_153814 [Dictyostelium purpureum]
gi|325080476|gb|EGC34030.1| hypothetical protein DICPUDRAFT_153814 [Dictyostelium purpureum]
Length = 468
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 5/176 (2%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+K IGG D+SF K + A IVVL+ +L++VYE Y +++L PYV G+LAFRE P
Sbjct: 295 IKLIGGCDISFPKSSKNDAVASIVVLEYPSLKVVYESYKMIKLTEPYVAGYLAFREVPHF 354
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++L + + K+ F P ++++DGNG+ H R G A+H G+LAN+ TIGV KNL G+T
Sbjct: 355 IALWETLTKKYPQFKPDLMILDGNGINHQRSVGAATHFGILANIPTIGVAKNLLVAKGIT 414
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
++ K NN ++I G G AM + + I+IS GH + +TA
Sbjct: 415 PEYIQNGF--KTNNIVEMIDYQDGK-RLIGHAMYNKQKEI--IYISPGHMMDANTA 465
>gi|218245184|ref|YP_002370555.1| endonuclease V [Cyanothece sp. PCC 8801]
gi|257058210|ref|YP_003136098.1| endonuclease V [Cyanothece sp. PCC 8802]
gi|226730046|sp|B7K379.1|NFI_CYAP8 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|218165662|gb|ACK64399.1| Deoxyribonuclease V [Cyanothece sp. PCC 8801]
gi|256588376|gb|ACU99262.1| Deoxyribonuclease V [Cyanothece sp. PCC 8802]
Length = 229
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/240 (35%), Positives = 127/240 (52%), Gaps = 40/240 (16%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + IQ+ LKK++I ED F+ + Y+ GVD+ F +++ +
Sbjct: 13 LEEAKTIQENLKKKVILEDQFSE-------------------VNYVAGVDVGF-RDNYQL 52
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
I VL L++V + L PY+PGFL+FRE P +L L+ +K P +
Sbjct: 53 TQAAIAVLSFPKLELVETQIACLPTTFPYIPGFLSFREIPAILKALEKLK-----IPPNI 107
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
++ DG G+ HPR G+ASH+GVL +L TIGV K+L G + + ++ N + +
Sbjct: 108 ILCDGQGIAHPRRLGIASHLGVLIDLPTIGVAKSL-------LVGKHEEVPPEKGNWQPL 160
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQAD 289
I G GV +RS + +KPI++S+GH ISL TA+ V M C KYR+PE R AD
Sbjct: 161 I----DKGEIIGVVLRSRTN-IKPIYVSIGHKISLPTAIDYV-MQCLTKYRLPETTRWAD 214
>gi|389860548|ref|YP_006362787.1| endonuclease V [Thermogladius cellulolyticus 1633]
gi|388525451|gb|AFK50649.1| Endonuclease V [Thermogladius cellulolyticus 1633]
Length = 220
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 136/243 (55%), Gaps = 41/243 (16%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
++ T +Q EL K++I ++ +E+E L + G+D S+++ ++
Sbjct: 8 SRATRLQRELFKQVI-----------ASVERPLFREDEARL---VAGLDASYTR---GLS 50
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
G V++DL +++V + Y+++R +PYVPG LAFREAP ++ L ++K+ P VL
Sbjct: 51 VGVAVLMDLHEMRVVDKKYAVVRAGIPYVPGLLAFREAPGVIRALLELEKK-----PDVL 105
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
MVDG+GL HPRGFG+ASH+G++ + ++GV K+ + + GVR +
Sbjct: 106 MVDGHGLTHPRGFGIASHVGLVTGIPSVGVAKSRLYGEEKVEGGVRYVY----------- 154
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT-CKYRVPEPIRQADIR 291
G GV + L ++S+G+ ++L+ AV +VK T +++PEP+ QAD+
Sbjct: 155 ----AHGVKAGVVVEHGGAEL---YVSIGYSVTLEQAVRLVKKTLLGHKLPEPLYQADLY 207
Query: 292 SRD 294
SR+
Sbjct: 208 SRE 210
>gi|123473747|ref|XP_001320060.1| Endonuclease V family protein [Trichomonas vaginalis G3]
gi|121902857|gb|EAY07837.1| Endonuclease V family protein [Trichomonas vaginalis G3]
Length = 243
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 121/214 (56%), Gaps = 10/214 (4%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI-VYEDYSLLRLQVPYVPGFLAFREAPV 152
++Y+ G D++ + + GC+VV+D++ + VY +++ + VPY+PG L FRE PV
Sbjct: 30 VRYVAGADLTVEDD---LMVGCLVVIDMENIDTPVYSKCTVVNVDVPYIPGLLCFREGPV 86
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHV-DG 211
+L +LD + +++VDGNG H RG GLAS++G+ +N+ GV K +V +G
Sbjct: 87 VLQMLDEFNQANTGIKIDLIIVDGNGEWHTRGLGLASYVGLKSNIPACGVSKTFFYVGEG 146
Query: 212 LTH-SGVRQLLDAK--ENNNEDIIPLMGGSGSTWGVAMRSTPDT--LKPIFISVGHCISL 266
V+++ K E + ++ + A+ T D+ PI++S GH L
Sbjct: 147 CPQPKDVQKMAQDKCPEKGDYYVLDYTTSNDRYIKCAVMRTTDSHPFNPIYVSSGHLCDL 206
Query: 267 DTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
D+ V ++K C++R PEP R AD SR+++++++
Sbjct: 207 DSVVSVIKKLCRFREPEPTRLADRISREFVRENK 240
>gi|126660118|ref|ZP_01731237.1| Endonuclease V [Cyanothece sp. CCY0110]
gi|126618561|gb|EAZ89311.1| Endonuclease V [Cyanothece sp. CCY0110]
Length = 220
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 126/243 (51%), Gaps = 48/243 (19%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
IQ +L+ ++IT+D + +EV Y+ GVD+ F K++ I +
Sbjct: 19 IQQQLRHQVITKD-----------------QLQEV--NYVAGVDVGF-KDNYKITQAAVA 58
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VL +L++V +L+ PY+PGFL+FRE P LL +D + P +++ DG
Sbjct: 59 VLKFPSLELVENQIALIPTNFPYIPGFLSFREIPALLKAIDKLT-----IIPDIILCDGQ 113
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNL----HHVDGLTHSGVRQLLDAKENNNEDIIP 233
G+ HPR G+ASH+GVL +L TIGV K+L H L + L+D KE
Sbjct: 114 GIAHPRRLGIASHLGVLIDLPTIGVAKSLLIGKHEEVPLEKGSWKPLIDKKE-------- 165
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQADIR 291
G +RS + +KPI++S+GH ISL TA+ V M C KYR+PE R AD
Sbjct: 166 -------IIGAVLRSRTN-VKPIYVSIGHKISLPTALNFV-MACLTKYRLPETTRWADKL 216
Query: 292 SRD 294
+ D
Sbjct: 217 ASD 219
>gi|75907042|ref|YP_321338.1| endonuclease V [Anabaena variabilis ATCC 29413]
gi|123610497|sp|Q3MEZ3.1|NFI_ANAVT RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|75700767|gb|ABA20443.1| Endonuclease V [Anabaena variabilis ATCC 29413]
Length = 221
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 43/236 (18%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
IQ+EL+ ++IT+D FT + +Y+ GVDM F + D +I+ +
Sbjct: 19 IQEELRHQVITQDQFTQPV------------------QYVAGVDMGF-EADGTISRAAVA 59
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VL LQ+V + PY+PGFL+FRE P +L L+ ++ + P +++ DG
Sbjct: 60 VLSFPDLQVVETSLAYRPTSFPYIPGFLSFREIPAVLDALEKIQTK-----PDIILCDGQ 114
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNNEDIIPL 234
G+ HPR G+ASH+GVL N+ TIGV K+L H +L D K + PL
Sbjct: 115 GIAHPRRLGIASHLGVLLNIPTIGVAKSLLIGRH---------EELADTKGSWQ----PL 161
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+ G G +R T +KP+++S GH ISL TA+ +++ T KYR+PE R AD
Sbjct: 162 I-HRGEIIGAVLR-TRVGVKPVYVSSGHKISLPTAIDYVLRCTPKYRLPETTRVAD 215
>gi|167388614|ref|XP_001738627.1| endonuclease V [Entamoeba dispar SAW760]
gi|165898048|gb|EDR25041.1| endonuclease V, putative [Entamoeba dispar SAW760]
Length = 223
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 121/244 (49%), Gaps = 35/244 (14%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW + Q K ++ ED W L L+ +GG+D+SFS P +A
Sbjct: 4 QWEKYQILHSKDVVLEDSHEWTLDT---------------LRRVGGLDISFSTNHPDLAI 48
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+V+ + + + LL L + V LL+N K++ YP+V++
Sbjct: 49 GCLVICEYPSGK------ELLTLT------------SQVYHELLNNCKEKYPELYPEVVL 90
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG A+H+G+ ++ +IGV K + DG+ + + + II
Sbjct: 91 VDGNGYYHPRRFGSATHVGICCDIPSIGVAKTVLCDDGIGKKEINIVTSQIKAGESTIIS 150
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
SG +RS ++ PI +S GH +SL TAV I K C +++PEPIR AD+ SR
Sbjct: 151 T--SSGEVLCGVIRSRGGSINPIVVSCGHKVSLSTAVNICKECCLHKIPEPIRLADLISR 208
Query: 294 DYLQ 297
+ L+
Sbjct: 209 NLLR 212
>gi|17231577|ref|NP_488125.1| endonuclease V [Nostoc sp. PCC 7120]
gi|56404417|sp|Q8YPV5.1|NFI_ANASP RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|17133220|dbj|BAB75784.1| endonuclease V [Nostoc sp. PCC 7120]
Length = 221
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 126/236 (53%), Gaps = 43/236 (18%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
IQ+EL+ ++ITED FT + +Y+ GVDM F + D +I+ +
Sbjct: 19 IQEELRHQVITEDQFTQPV------------------QYVAGVDMGF-EADGTISRAAVA 59
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VL LQ++ + + PY+PGFL+FRE P +L L ++ + P +++ DG
Sbjct: 60 VLSFPDLQVIETNLAYRPTSFPYIPGFLSFREIPAVLDALAKVQTK-----PDIILCDGQ 114
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNNEDIIPL 234
G+ HPR G+ASH+GVL N+ TIGV K+L H +L D K + PL
Sbjct: 115 GIAHPRRLGIASHLGVLLNIPTIGVAKSLLIGKH---------EELADTKGSWQ----PL 161
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+ G G +R T +KP+++S GH ISL TA+ +++ T KYR+PE R AD
Sbjct: 162 I-HRGEIIGAVLR-TRVGVKPVYVSSGHKISLPTAIDYVLRCTPKYRLPETTRVAD 215
>gi|159039685|ref|YP_001538938.1| deoxyribonuclease V [Salinispora arenicola CNS-205]
gi|157918520|gb|ABV99947.1| Deoxyribonuclease V [Salinispora arenicola CNS-205]
Length = 189
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
G+D+S+ K + C VV++L++L + ++ PYVPG LAFREAPVLL L
Sbjct: 3 GLDVSYEKSTNRV-CAAAVVIELESLAVTEVATAVGEATFPYVPGLLAFREAPVLLDALQ 61
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVR 218
+ P+VL+ DG G+ HPR FGLA H+GVL + + GV K D G R
Sbjct: 62 GLATE-----PEVLVCDGYGVAHPRRFGLACHVGVLTGVPSFGVAKTSFIAD-FVDPGFR 115
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC- 277
+ PL G G G A+R T D +KP+F+SVGH I LD A I C
Sbjct: 116 R---------GSWSPLTEG-GEVLGHALR-TRDGVKPVFVSVGHRIGLDEACEITLRLCP 164
Query: 278 KYRVPEPIRQADIRSRDYLQKHQST 302
+YRVPE RQAD+ SR L H +T
Sbjct: 165 RYRVPEATRQADMVSRRIL--HSAT 187
>gi|401420190|ref|XP_003874584.1| putative endonuclease V [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322490820|emb|CBZ26084.1| putative endonuclease V [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 398
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 120/215 (55%), Gaps = 14/215 (6%)
Query: 94 LKYIGGVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
L ++GGVD+SF D +AC + +L +++ V L+ PY+ GFLAFRE
Sbjct: 171 LTFVGGVDISFIPGSDDGVAC--LAILRYPSMEHVKTYMHRCTLREPYMSGFLAFREIQP 228
Query: 153 LLSLLDNMKKR--ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
+ L D+++ A P +L+VDGNG+ HPR GLA+H+GV ++ TIG K + +D
Sbjct: 229 VCELFDSVRVELLATQTMPHLLIVDGNGVQHPRRCGLATHLGVALDIPTIGCSKKMLQLD 288
Query: 211 GLTHSGVRQLLD-----AKENNNEDIIPLMGGSGST---WGVAMRSTPDTLKP-IFISVG 261
GLT GV L+ A + + + + G+ S +G A+ +++K I++S G
Sbjct: 289 GLTREGVETALETLGEAASSSPSLPRLLPLLGTSSPTQLYGYAVHGHLNSVKKCIYVSPG 348
Query: 262 HCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYL 296
HC+ A +V ++R+PEPIR AD+ SR Y+
Sbjct: 349 HCVGFAVAAALVMTMLRHRIPEPIRAADLGSRAYI 383
>gi|390452525|ref|ZP_10238053.1| endonuclease V [Paenibacillus peoriae KCTC 3763]
Length = 226
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 118/215 (54%), Gaps = 21/215 (9%)
Query: 86 TKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFL 145
TKE++ + Y+ G+D+++S E + IV+L+ +L IV +Q PY+PG
Sbjct: 28 TKEDQFPEINYVAGIDVAYS-EQSDLLIAAIVILEANSLNIVESVVVEDSVQFPYIPGLF 86
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+FRE P ++ L+ +K PQ+++ DG G+ HPR FGLASH+GV+ + TIG GK
Sbjct: 87 SFRELPPIVKALEQIKTS-----PQLIVCDGQGIAHPRRFGLASHLGVIFDAPTIGCGKT 141
Query: 206 LHHVDGLTHSGVRQLLDAKENNNE-DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCI 264
R D KE + E L+ G +R T +++KP+F+SVGH I
Sbjct: 142 ------------RLWGDYKEPSQERGACSLLVDDEEIIGSVLR-TQESVKPLFVSVGHRI 188
Query: 265 SLDTAV-MIVKMTCKYRVPEPIRQADIRSRDYLQK 298
SL+TA I+K+ YR+PE RQAD R L K
Sbjct: 189 SLETACNWILKLAPHYRLPETTRQADQLVRKVLSK 223
>gi|398024400|ref|XP_003865361.1| endonuclease V, putative [Leishmania donovani]
gi|322503598|emb|CBZ38684.1| endonuclease V, putative [Leishmania donovani]
Length = 395
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 114/214 (53%), Gaps = 12/214 (5%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L +GGVD+SF D C+ +L +++ V L+ PY+ GFLAFRE +
Sbjct: 168 LTLVGGVDISFIP-DSDDGVACLAILRYPSMEQVKTYMHRCTLREPYMTGFLAFREIQPV 226
Query: 154 LSLLDNMKKR--ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
L D+++ A PQ+L+VDGNG+ HPR GLA+H+GV ++ TIG K + VDG
Sbjct: 227 CDLFDSVRVELLATQTMPQLLIVDGNGVQHPRRCGLATHLGVALDIPTIGCSKKMLQVDG 286
Query: 212 LTHSGVRQLLD-----AKENNNEDIIPLMGGSGST---WG-VAMRSTPDTLKPIFISVGH 262
LT V L+ A + + + + G+ S +G V R K I++S GH
Sbjct: 287 LTREAVEAALETLGEAASSSPSLPRLLPLLGTSSPTQLYGYVVHRHLNSVKKCIYVSPGH 346
Query: 263 CISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYL 296
CI A +V ++R+PEPIR AD+ SR Y+
Sbjct: 347 CIGFAVATALVMTMLRHRIPEPIRAADLGSRAYI 380
>gi|146104445|ref|XP_001469826.1| putative endonuclease V [Leishmania infantum JPCM5]
gi|134074196|emb|CAM72938.1| putative endonuclease V [Leishmania infantum JPCM5]
Length = 395
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 114/214 (53%), Gaps = 12/214 (5%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L +GGVD+SF D C+ +L +++ V L+ PY+ GFLAFRE +
Sbjct: 168 LTLVGGVDISFIP-DSDDGVACLAILRYPSMEQVKTYMHRCTLREPYMTGFLAFREIQPV 226
Query: 154 LSLLDNMKKR--ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
L D+++ A PQ+L+VDGNG+ HPR GLA+H+GV ++ TIG K + VDG
Sbjct: 227 CDLFDSVRVELLATQTMPQLLIVDGNGVQHPRRCGLATHLGVALDIPTIGCSKKMLQVDG 286
Query: 212 LTHSGVRQLLD-----AKENNNEDIIPLMGGSGST---WG-VAMRSTPDTLKPIFISVGH 262
LT V L+ A + + + + G+ S +G V R K I++S GH
Sbjct: 287 LTREAVEAALETLGEAASSSPSLPRLLPLLGTSSPTQLYGYVVHRHLNSVKKCIYVSPGH 346
Query: 263 CISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYL 296
CI A +V ++R+PEPIR AD+ SR Y+
Sbjct: 347 CIGFAVATALVMTMLRHRIPEPIRAADLGSRAYI 380
>gi|310643402|ref|YP_003948160.1| endonuclease V [Paenibacillus polymyxa SC2]
gi|309248352|gb|ADO57919.1| Endonuclease V [Paenibacillus polymyxa SC2]
gi|392304170|emb|CCI70533.1| deoxyribonuclease V [Paenibacillus polymyxa M1]
Length = 234
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 120/217 (55%), Gaps = 25/217 (11%)
Query: 86 TKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFL 145
TKE+ ++Y+ GVD+++S E + IV+LD +LQ+V + PY+PG
Sbjct: 33 TKEDRFPEIQYVAGVDVAYS-EQSDLLVAAIVILDASSLQVVESIVVEDAVHFPYIPGLF 91
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+FRE P ++ L +K PQ+++ DG G+ HPR FGLASH+GV+ ++ TIG GK
Sbjct: 92 SFRELPPIVKALKQIKTS-----PQLVVCDGQGIAHPRRFGLASHLGVIFDIPTIGCGKT 146
Query: 206 L---HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGH 262
+ G LL + E+II G A+R T D +KP+F+SVGH
Sbjct: 147 RLWGEFEEPSQERGACSLL----MDREEII----------GRALR-TQDNIKPLFVSVGH 191
Query: 263 CISLDTAV-MIVKMTCKYRVPEPIRQADIRSRDYLQK 298
ISL+TA I+K+ +YR+PE RQAD R L +
Sbjct: 192 RISLETACNWILKLCPQYRLPETTRQADQLVRKALSQ 228
>gi|427731777|ref|YP_007078014.1| deoxyinosine 3'endonuclease [Nostoc sp. PCC 7524]
gi|427367696|gb|AFY50417.1| deoxyinosine 3'endonuclease (endonuclease V) [Nostoc sp. PCC 7524]
Length = 221
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 127/239 (53%), Gaps = 37/239 (15%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + IQ++L++++IT D LP +KY+ GVDM F+ D +I
Sbjct: 13 LEEAINIQEKLREQVITND----QLPQP--------------VKYVAGVDMGFAA-DGTI 53
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
+ + VL LQ++ + PY+PGFL+FRE P +L L+ ++ P +
Sbjct: 54 SRAAVAVLSFPDLQVIETQLAYRPTSFPYIPGFLSFREIPAILDALEKIQTT-----PDI 108
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
++ DG G+ HPR G+ASH+GV+ NL TIGV K+L G + L + + + +
Sbjct: 109 ILCDGQGIAHPRRLGIASHLGVIINLPTIGVAKSL-------LIGKHEELPDTKGSWQPL 161
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
I G T G +R T +KP+++S GH ISL TA+ +++ T KYR+PE R AD
Sbjct: 162 I----HKGETIGAVLR-TRAGVKPVYVSSGHKISLLTAIDYVLRCTPKYRLPETTRVAD 215
>gi|427736134|ref|YP_007055678.1| deoxyinosine 3'endonuclease [Rivularia sp. PCC 7116]
gi|427371175|gb|AFY55131.1| deoxyinosine 3'endonuclease (endonuclease V) [Rivularia sp. PCC
7116]
Length = 221
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 120/233 (51%), Gaps = 37/233 (15%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
IQ+EL+K +ITED F E +KY+ GVDM F + D +I+ +
Sbjct: 19 IQEELRKEVITEDKF------------------EQPIKYVAGVDMGF-EADGTISRAAVA 59
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VL LQ+ + + PY+PGFL+FRE P ++ L + K P +++ DG
Sbjct: 60 VLSFPDLQLQEQSIAKRETSFPYIPGFLSFREIPAVIDALQKINK-----TPDIILCDGQ 114
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
G+ HPR G+ASH+GV+ ++ TIGV K+ D S + + NE I
Sbjct: 115 GIAHPRRMGIASHLGVILDIPTIGVAKSWLIGDYKEVSQKKGSWQPLIHKNETI------ 168
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
G +R T +KP+++S GH ISL TA+ +++ T KYR+PE R AD
Sbjct: 169 -----GAVLR-TRSNVKPVYVSSGHRISLPTAIDYVLRCTPKYRLPETTRIAD 215
>gi|163783495|ref|ZP_02178486.1| hypothetical protein HG1285_08779 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881259|gb|EDP74772.1| hypothetical protein HG1285_08779 [Hydrogenivirga sp. 128-5-R1-1]
Length = 218
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 109/197 (55%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFS--KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
++ +GG+D++F + +P+ A +VV++L+TL+ VYE R+ PY+P FLAFRE P
Sbjct: 26 IETVGGMDLTFEDIRHNPTRAWASLVVIELKTLKPVYELVVEDRVSFPYIPTFLAFREMP 85
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
+LL L + + + P V VDG G+ HPRG G+ASH GV ++GV K
Sbjct: 86 LLLKLYERTEVK-----PDVFFVDGQGVAHPRGCGIASHFGVETGEVSVGVAK------- 133
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
S + D D + G G +R T D P+F+SVGH ISL+TA+
Sbjct: 134 ---SKLFGYYDEPGEKRGD-YSYLKFKGRIVGAVLR-TRDRTAPVFVSVGHRISLNTAMD 188
Query: 272 IVKMTCKYRVPEPIRQA 288
+V T +YR+PEP R A
Sbjct: 189 LVLKTSRYRIPEPTRLA 205
>gi|294816036|ref|ZP_06774679.1| Endonuclease V [Streptomyces clavuligerus ATCC 27064]
gi|326444378|ref|ZP_08219112.1| endonuclease V [Streptomyces clavuligerus ATCC 27064]
gi|294328635|gb|EFG10278.1| Endonuclease V [Streptomyces clavuligerus ATCC 27064]
Length = 245
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 114/202 (56%), Gaps = 20/202 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+++ +D + VVLD +TL +V E ++ R+ PYVPG LAFRE P +L+
Sbjct: 42 VTGVDVAYD-DDRGLVAAAAVVLDAETLAVVEEATAVGRVAFPYVPGLLAFRELPAVLAA 100
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-LHHVDGLTHS 215
L ++ P +++ DG GL HPR FGLA+H+GVL L IGV KN H G
Sbjct: 101 LGALRS-----APGLVVCDGYGLAHPRRFGLAAHLGVLTGLPAIGVAKNPFVHAHG--EL 153
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVK 274
G R+ D PL G+ G A+R T +KP+++SVGH +SLD A ++
Sbjct: 154 GPRR---------GDTAPLRADDGTELGRALR-TQQGVKPVYVSVGHRVSLDNACAHTLR 203
Query: 275 MTCKYRVPEPIRQADIRSRDYL 296
+ +YR+PE R AD R RD L
Sbjct: 204 LAPRYRLPETTRLADRRCRDAL 225
>gi|398816819|ref|ZP_10575460.1| deoxyinosine 3'endonuclease (endonuclease V) [Brevibacillus sp.
BC25]
gi|398031958|gb|EJL25326.1| deoxyinosine 3'endonuclease (endonuclease V) [Brevibacillus sp.
BC25]
Length = 228
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 117/206 (56%), Gaps = 23/206 (11%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
KE++ +++I GVD+++ E + G +V+LD +LQ++ ++ PY+PG +
Sbjct: 29 KEDQLTDVRFIAGVDVAYHAESDLLVAG-VVILDATSLQVIESVVIQDTVEFPYIPGLFS 87
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P L+ +K PQ+++ DG G+ HPR FGLASH+GVL ++ TIG GK
Sbjct: 88 FRELPPLVRAFKELKTT-----PQLVVCDGQGIAHPRRFGLASHLGVLFDIPTIGCGKT- 141
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDII--PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCI 264
R L + +E E + PL+ G G +R+ P+ +KPIF+S+GH I
Sbjct: 142 -----------RLLGEYEEPAQERGVYSPLI-DQGEIIGGVLRTQPN-IKPIFVSIGHGI 188
Query: 265 SLDTAVM-IVKMTCKYRVPEPIRQAD 289
SL TA I K++ YR+PE RQAD
Sbjct: 189 SLPTACAWITKLSPNYRLPETTRQAD 214
>gi|427718811|ref|YP_007066805.1| Endonuclease V [Calothrix sp. PCC 7507]
gi|427351247|gb|AFY33971.1| Endonuclease V [Calothrix sp. PCC 7507]
Length = 221
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 125/233 (53%), Gaps = 37/233 (15%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
IQ++L+ +ITED + + ++Y+ GVDM F + D +I+ +
Sbjct: 19 IQEQLRTEVITED------------------QLQAPIQYVAGVDMGF-EADGTISRAAVA 59
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VL LQ++ + PY+PGFL+FRE P +L L+ ++ P +++ DG
Sbjct: 60 VLSFPDLQVLETTVAYRPTSFPYIPGFLSFREIPAVLDALEKVQ-----IIPDIILCDGQ 114
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
G+ HPR G+ASH+GV+ ++TTIGV K+L G Q L + + + +I
Sbjct: 115 GIAHPRRLGIASHLGVILDITTIGVAKSL-------LIGKHQELAETKGSWQPLI----H 163
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
G T G +R T +KP+++S GH ISL TA+ +++ T KYR+PE R AD
Sbjct: 164 QGETIGAVLR-TRAGVKPVYVSSGHRISLSTAIDYVLRCTPKYRLPETTRIAD 215
>gi|381163207|ref|ZP_09872437.1| deoxyinosine 3'endonuclease (endonuclease V) [Saccharomonospora
azurea NA-128]
gi|379255112|gb|EHY89038.1| deoxyinosine 3'endonuclease (endonuclease V) [Saccharomonospora
azurea NA-128]
Length = 243
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 114/209 (54%), Gaps = 19/209 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD++++ + +A +VVLD TL ++ + + PY PG AFRE P L
Sbjct: 48 VRTVAGVDVAYAADSDRLAA-AVVVLDHTTLDVLETSTVVTTAEFPYEPGLFAFRELPTL 106
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ L ++ P +++ DG+GL HPR FGLA H+G+LA++ T GV KN+H
Sbjct: 107 VTALRGLRT-----VPDLIVCDGHGLAHPRRFGLACHLGILADVPTFGVAKNVH------ 155
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-I 272
V + + PL G G G A+R T +KP+F+SVGH ISLDTA
Sbjct: 156 ---VGEFVPPASQRGA-TSPLTVG-GEVVGAAVR-TRSRVKPVFVSVGHRISLDTACAHT 209
Query: 273 VKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
+ ++ YR+PE R AD SR+ L S
Sbjct: 210 LTLSTHYRLPETTRHADHLSREVLAGRIS 238
>gi|451981788|ref|ZP_21930133.1| Endonuclease V [Nitrospina gracilis 3/211]
gi|451760998|emb|CCQ91398.1| Endonuclease V [Nitrospina gracilis 3/211]
Length = 234
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 22/197 (11%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
K I G D+S S+ G +VVLD TL++V E + PYVPG L+FREAP+LL
Sbjct: 38 KLIAGADISLSQSRGPAYAG-VVVLDANTLEVVAEYTQRGEIDFPYVPGLLSFREAPLLL 96
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + P ++M+DG G+ HPRG GLASH+G+ + T+G K+
Sbjct: 97 KAFEQIDP-----PPDLIMLDGQGIAHPRGLGLASHLGLFLDCPTVGCAKS--------- 142
Query: 215 SGVRQLLDAKENNNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-M 271
R + D +E + PL G +G T G A+R T + KPIF+S GH I L +A+
Sbjct: 143 ---RLIGDHREPGTKKGSHAPLKGKNGETLGSALR-TREGCKPIFVSAGHKIDLASALEW 198
Query: 272 IVKMTCKYRVPEPIRQA 288
+++++ +YR+PEP R A
Sbjct: 199 VLRVSPRYRIPEPTRLA 215
>gi|313673101|ref|YP_004051212.1| deoxyribonuclease v [Calditerrivibrio nitroreducens DSM 19672]
gi|312939857|gb|ADR19049.1| Deoxyribonuclease V [Calditerrivibrio nitroreducens DSM 19672]
Length = 214
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 115/207 (55%), Gaps = 22/207 (10%)
Query: 97 IGGVDMSFSKEDPSIACGCIVV-LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+ G+D+S + C I++ DL+TL+ E + +++PYVPGFL+FRE P++
Sbjct: 28 VAGIDISVDRYTSIGYCAIILIDRDLKTLE---EASFVDEIKIPYVPGFLSFRELPIIEK 84
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+K + P ++ +DG G+ HPRGFG+ASH G+ N+ TIG K+L
Sbjct: 85 CFTTLKSK-----PDLVFIDGQGIAHPRGFGIASHFGITFNIPTIGCAKSL--------- 130
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVK 274
+ EN P++ S G A+R+ DT KPIF+S GH I++D ++ + +
Sbjct: 131 -LVGNYKEPENLKGSFSPIIYQS-KIVGAALRTKSDT-KPIFVSPGHMITIDQSIKLTLS 187
Query: 275 MTCKYRVPEPIRQADIRSRDYLQKHQS 301
KYR+PEP R+ADI S+ + HQ+
Sbjct: 188 FIDKYRIPEPTRRADILSKKLRRFHQA 214
>gi|186683215|ref|YP_001866411.1| endonuclease V [Nostoc punctiforme PCC 73102]
gi|226730060|sp|B2IWL4.1|NFI_NOSP7 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|186465667|gb|ACC81468.1| Endonuclease V [Nostoc punctiforme PCC 73102]
Length = 221
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 130/241 (53%), Gaps = 37/241 (15%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDP 109
+ L + IQ++L+ ++ITED + E ++Y+ GVDM F + D
Sbjct: 11 STLEEAIVIQEKLRDQVITED------------------QLEEPIQYVAGVDMGF-EADG 51
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
+I+ + VL LQ++ + PYVPGFL+FRE P +L L+ ++ P
Sbjct: 52 TISRAAVAVLSFPDLQVIETSLAHRPTTFPYVPGFLSFREIPAVLDALEKIQTT-----P 106
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+++ DG G+ HPR G+ASH+G+L ++ TIGV K+ G + L + +++
Sbjct: 107 NIILCDGQGIAHPRRLGIASHLGLLIDMPTIGVAKS-------RLVGKYEELAETKGSSQ 159
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
+I +G T GV +RS +KP++IS GH ISL TA+ +++ T KYR+PE R A
Sbjct: 160 PLI----YNGETVGVVLRSR-TGVKPLYISSGHRISLPTAIDYVLRCTPKYRLPETTRIA 214
Query: 289 D 289
D
Sbjct: 215 D 215
>gi|119484370|ref|ZP_01618987.1| Endonuclease V [Lyngbya sp. PCC 8106]
gi|119457844|gb|EAW38967.1| Endonuclease V [Lyngbya sp. PCC 8106]
Length = 221
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 125/233 (53%), Gaps = 38/233 (16%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
IQ++LK ++T D F ++Y+ GVD+ F ++ +I+ +
Sbjct: 19 IQNQLKSLVVTTDQFE-------------------SIQYVAGVDVGF-LDNYTISQAAVA 58
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VL LQ+ + S + PY+PGFL+FRE PV+L L+ + P +++ DG
Sbjct: 59 VLSFPDLQLQEQAISQRQTTFPYIPGFLSFREVPVILDALEKLT-----IIPDIIICDGQ 113
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
G+ HP+ FGLA H+GVL NL TIGV K++ G Q L ++ + E +I
Sbjct: 114 GIAHPQRFGLACHLGVLINLPTIGVAKSI-------FIGTHQELATEKGSWEPLI----D 162
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
G G +RS + +KP+++S GH ISL+TA+ +++ T KYR+PE R AD
Sbjct: 163 RGEVIGAVVRSRTN-VKPLYVSPGHRISLETAIDFVLQCTPKYRLPETTRWAD 214
>gi|312136631|ref|YP_004003968.1| deoxyribonuclease v [Methanothermus fervidus DSM 2088]
gi|311224350|gb|ADP77206.1| Deoxyribonuclease V [Methanothermus fervidus DSM 2088]
Length = 212
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 123/239 (51%), Gaps = 51/239 (21%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L++ IQ L K++I +++ NT + GVD+SFS + ++
Sbjct: 7 LDELANIQSNLSKKVIRKNYLD-------EVNT------------VAGVDVSFSVNNFAV 47
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
+ IV D L+I+ + + L PY+ GFL FREA ++S++ KK N+F V
Sbjct: 48 SAAVIV--DFNDLKIIEKKTEITNLFFPYISGFLGFREADAIISVI---KKLKNNF--DV 100
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+VDGNG+LHPR FGLASH+GVL ++ +IGV K L + AK NN+
Sbjct: 101 LVVDGNGILHPRRFGLASHVGVLLDIPSIGVAKKL-------------IRGAKVKNNK-- 145
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
+ G GV + +++SVGH +SL T I+ +Y+VPEP+R A I
Sbjct: 146 ---IFYQGEVLGVKVGD-------VYVSVGHKVSLKTCEQIISKLIRYKVPEPVRLAHI 194
>gi|418461703|ref|ZP_13032769.1| Endonuclease V [Saccharomonospora azurea SZMC 14600]
gi|359738225|gb|EHK87120.1| Endonuclease V [Saccharomonospora azurea SZMC 14600]
Length = 232
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 113/209 (54%), Gaps = 19/209 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD++++ + +A +VVLD TL ++ + + PY PG AFRE P L
Sbjct: 37 VRTVAGVDVAYAADSDRLAA-AVVVLDHTTLDVLETSTVVTTAEFPYEPGLFAFRELPAL 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ L ++ P +L+ DG+GL HPR FGLA H+G+LA++ T GV KN+H
Sbjct: 96 VTALRGLRT-----VPDLLVCDGHGLAHPRRFGLACHLGILADVPTFGVAKNVH------ 144
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-I 272
V + + PL G G A+R T +KP+F+SVGH ISLDTA
Sbjct: 145 ---VGEFVPPASQRGA-TSPLT-VDGEVVGAAVR-TRSGVKPVFVSVGHRISLDTACAHT 198
Query: 273 VKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
+ ++ YR+PE R AD SR+ L S
Sbjct: 199 LTLSTHYRLPETTRHADHLSREVLAGRVS 227
>gi|157876938|ref|XP_001686810.1| putative endonuclease V [Leishmania major strain Friedlin]
gi|68129885|emb|CAJ09191.1| putative endonuclease V [Leishmania major strain Friedlin]
Length = 394
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 118/220 (53%), Gaps = 12/220 (5%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L +GGVD+SF D C+ +L +++ V L+ PY+ GFL+FRE
Sbjct: 167 LTLVGGVDISFIP-DSDDGVACLAILRYPSMEQVRAYMHRCTLREPYMSGFLSFREIQPF 225
Query: 154 LSLLDNMKKR--ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
L D+++ A PQ+L+VDGNG+ HPR GLA+H+GV ++ TIG K + VDG
Sbjct: 226 CELFDSVRVELLATQTMPQLLIVDGNGVQHPRRCGLATHLGVALDIPTIGCSKKMLQVDG 285
Query: 212 LTHSGVRQLLD-----AKENNNEDIIPLMGGSGST---WGVAMRSTPDTLKP-IFISVGH 262
LT V L+ A + + + + G+ S +G + +++K I++S GH
Sbjct: 286 LTREAVEAALETLGEAASSSPSLPRLLPLLGTSSPTQLYGYVVHGHLNSVKKCIYVSPGH 345
Query: 263 CISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQST 302
C+ A +V ++R+PEPIR AD+ SR Y++ S+
Sbjct: 346 CVGFAVATALVVTMLRHRIPEPIRAADLGSRAYIRDALSS 385
>gi|428207591|ref|YP_007091944.1| Endonuclease V [Chroococcidiopsis thermalis PCC 7203]
gi|428009512|gb|AFY88075.1| Endonuclease V [Chroococcidiopsis thermalis PCC 7203]
Length = 221
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 118/229 (51%), Gaps = 33/229 (14%)
Query: 73 TWNLPNSTTTNTSTKEEEEVL--------LKYIGGVDMSFSKEDPSIACGCIVVLDLQTL 124
TW L + K E++ ++Y+ GVDM F + D +I+ + VL +L
Sbjct: 8 TWTLTTAEAIAIQEKLRGEIITTDKIPTPVQYVAGVDMGF-EADGTISRAAVAVLSFPSL 66
Query: 125 QIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRG 184
Q+ + PY+PGFL+FRE P +L L+ + + P +++ DG G+ HPR
Sbjct: 67 QLQETAIARRPTSFPYIPGFLSFREVPAVLDALEKI-----NITPDIILCDGQGIAHPRR 121
Query: 185 FGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGST 241
FG+A H+G++ N+ TIGV K+L H + G QLL K G T
Sbjct: 122 FGIACHLGLIVNIPTIGVAKSLLIGKHQEVPEARGSWQLLTDK--------------GET 167
Query: 242 WGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
G +R+ T KP++IS GH +SL TA+ +++ T KYR+PE R AD
Sbjct: 168 IGAVLRTRTGT-KPLYISSGHRVSLTTAIDYVLQCTPKYRLPETTRIAD 215
>gi|418463955|ref|ZP_13034899.1| Endonuclease V [Saccharomonospora azurea SZMC 14600]
gi|359730989|gb|EHK80103.1| Endonuclease V [Saccharomonospora azurea SZMC 14600]
Length = 232
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 113/209 (54%), Gaps = 19/209 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD++++ + +A +VVLD TL ++ + + PY PG AFRE P L
Sbjct: 37 VRTVAGVDVAYAADSDRLAA-AVVVLDHTTLDVLETSTVVTTAEFPYEPGLFAFRELPAL 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ L ++ P +L+ DG+GL HPR FGLA H+G+LA++ T GV KN+H
Sbjct: 96 VTALRGLRT-----VPDLLVCDGHGLAHPRRFGLACHLGILADVPTFGVAKNVH------ 144
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-I 272
V + + PL G G A+R T +KP+F+SVGH ISLDTA
Sbjct: 145 ---VGEFVPPASQRGA-TSPLT-VDGEVVGAAVR-TRSGVKPVFVSVGHRISLDTACAHT 198
Query: 273 VKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
+ ++ YR+PE R AD SR+ L S
Sbjct: 199 LTLSTHYRLPETTRHADHLSREVLAGRVS 227
>gi|330466319|ref|YP_004404062.1| deoxyribonuclease V [Verrucosispora maris AB-18-032]
gi|328809290|gb|AEB43462.1| deoxyribonuclease V [Verrucosispora maris AB-18-032]
Length = 216
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + GVD+S+ + P + VV DL T V + PYVPG LAFRE P+LL
Sbjct: 26 RLVAGVDVSYDRSSPCVTAAA-VVFDLATGVEVESAVVPGEVSFPYVPGLLAFREVPILL 84
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ LD + R P +++ DG G+ HPR FGLA H+GV+A L T GV K V G
Sbjct: 85 TALDRLAAR-----PDLVVCDGYGIAHPRRFGLACHLGVVAGLPTFGVAKT-PFVAGYDE 138
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA-VMIV 273
G + D PL G G +R T +KP+F+SVGH +L A + +
Sbjct: 139 PG---------GSRGDWSPLR-ADGEVLGRVLR-TQTGVKPVFVSVGHRTTLHQATTLTL 187
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQKHQ 300
++ +YR+PE IR+AD SR+ L++ Q
Sbjct: 188 DLSPRYRLPEVIRRADFLSREALRRAQ 214
>gi|315502041|ref|YP_004080928.1| deoxyribonuclease v [Micromonospora sp. L5]
gi|315408660|gb|ADU06777.1| Deoxyribonuclease V [Micromonospora sp. L5]
Length = 239
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 19/207 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D++++ +D + + VLD TL +V E + R PYVPG AFRE P LL+
Sbjct: 44 VAGLDVAYA-QDRDLLAAAVTVLDAATLDVVDEAVCVGRPAFPYVPGLFAFREMPALLAA 102
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
LD + R P++L+ DG+GL HPR FGLA H+G++ L TIGVGK V T G
Sbjct: 103 LDRLTTR-----PELLVCDGHGLAHPRRFGLACHLGLVTGLPTIGVGKT-PLVGSWTGPG 156
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKM 275
+ ++ D+ G G +R T D ++P+F+SVGH + LD AV ++ +
Sbjct: 157 ------PERGDSADLC----DEGEVVGRVLR-TQDGVRPVFVSVGHRMGLDEAVERVLAL 205
Query: 276 TCKYRVPEPIRQADIRSRDYLQKHQST 302
T +YR+PE R AD R L ++
Sbjct: 206 TPRYRLPETTRTADRLCRRALADAGAS 232
>gi|357399709|ref|YP_004911634.1| endonuclease V [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337766118|emb|CCB74829.1| Endonuclease V [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 231
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 21/205 (10%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + GVD+++++ +A G +VVLD TL +V + + PYVPG AFRE PVL+
Sbjct: 38 RLVAGVDVAYAEGSDRVAAG-VVVLDTATLDVVEQATAQGVATFPYVPGLFAFREIPVLV 96
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGL 212
L+ ++ P++L+ DG+GL HPR FGLA H+G+L + + GV K + D
Sbjct: 97 EALNRLES-----VPELLLCDGHGLAHPRRFGLACHLGLLTGIPSAGVAKTPFVGRYDPA 151
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM- 271
L + D++ G T G A+R T D +KP+++SVGH I LDTA
Sbjct: 152 A-------LGSGRGAQADLV----DDGETVGRALR-TQDGVKPVYVSVGHGIDLDTACRH 199
Query: 272 IVKMTCKYRVPEPIRQADIRSRDYL 296
++ + YR+PE R+AD SRD L
Sbjct: 200 VLALAPSYRLPETTRRADRLSRDTL 224
>gi|302865493|ref|YP_003834130.1| deoxyribonuclease V [Micromonospora aurantiaca ATCC 27029]
gi|302568352|gb|ADL44554.1| Deoxyribonuclease V [Micromonospora aurantiaca ATCC 27029]
Length = 239
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 114/207 (55%), Gaps = 19/207 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D++++ +D + + VLD TL +V E + R PYVPG AFRE P LL+
Sbjct: 44 VAGLDVAYA-QDGDLLAAAVTVLDAATLDVVDEAVCVGRPAFPYVPGLFAFREMPALLAA 102
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
LD + R P++L+ DG+GL HPR FGLA H+G++ L TIGVGK V T G
Sbjct: 103 LDRLTTR-----PELLVCDGHGLAHPRRFGLACHLGLVTGLPTIGVGKT-PLVGSWTGPG 156
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKM 275
+ ++ D+ G G +R T D ++P+F+SVGH + LD AV ++ +
Sbjct: 157 ------PERGDSADLC----DEGEVVGRVLR-TQDGVRPVFVSVGHRMGLDEAVERVLAL 205
Query: 276 TCKYRVPEPIRQADIRSRDYLQKHQST 302
T +YR+PE R AD R L ++
Sbjct: 206 TPRYRLPETTRTADRLCRRALADAGAS 232
>gi|381406081|ref|ZP_09930765.1| endonuclease V [Pantoea sp. Sc1]
gi|380739280|gb|EIC00344.1| endonuclease V [Pantoea sp. Sc1]
Length = 222
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 117/216 (54%), Gaps = 26/216 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F +E +I +V+L+ +L++V + + +PY+PGFL+FRE P L+
Sbjct: 29 RYIGGADVGFEQEG-TITRAAMVILEYPSLRLVEHRIARIETTMPYIPGFLSFREYPALM 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + ++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 88 AAWEMLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKS-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G LDA+ + + +I G W R P+F++ GH +SLDTA+ V+
Sbjct: 136 CGRFADLDAQPGSRQPLIDKGEQIGWVWRSKQRCN-----PLFVATGHRVSLDTALQWVE 190
Query: 275 -MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
T YR+PEP R AD + + QRWQ
Sbjct: 191 NCTRGYRLPEPTRWADAVA-------SNRSAFQRWQ 219
>gi|386355748|ref|YP_006053994.1| Deoxyribonuclease V [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|365806256|gb|AEW94472.1| Deoxyribonuclease V [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 205
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 114/205 (55%), Gaps = 21/205 (10%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + GVD+++++ +A G +VVLD TL +V + + PYVPG AFRE PVL+
Sbjct: 12 RLVAGVDVAYAEGSDRVAAG-VVVLDTATLDVVEQATAQGVATFPYVPGLFAFREIPVLV 70
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGL 212
L+ ++ P++L+ DG+GL HPR FGLA H+G+L + + GV K + D
Sbjct: 71 EALNRLES-----VPELLLCDGHGLAHPRRFGLACHLGLLTGIPSAGVAKTPFVGRYD-- 123
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM- 271
L + D++ G T G A+R T D +KP+++SVGH I LDTA
Sbjct: 124 -----PAALGSGRGAQADLV----DDGETVGRALR-TQDGVKPVYVSVGHGIDLDTACRH 173
Query: 272 IVKMTCKYRVPEPIRQADIRSRDYL 296
++ + YR+PE R+AD SRD L
Sbjct: 174 VLALAPSYRLPETTRRADRLSRDTL 198
>gi|392544851|ref|ZP_10291988.1| endonuclease V [Pseudoalteromonas rubra ATCC 29570]
Length = 224
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 115/211 (54%), Gaps = 23/211 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ I G D+++ + G IVVLD TL I+ ++ PY+PG +FRE P L
Sbjct: 32 ISTIAGTDVAYDDATNQLV-GAIVVLDANTLDIIETQVVTESVRFPYIPGLFSFRELPPL 90
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
LS + + + P +++ DG GL HPR FGLA H+GV ++ TIG GK + G T
Sbjct: 91 LSAFEQLTHK-----PDMIVCDGQGLAHPRRFGLACHLGVTLDIPTIGCGKT--RLTG-T 142
Query: 214 HSGVRQL--LDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV- 270
H + + AK +NE +I G +R T D +KP+++SVGH +SL TA
Sbjct: 143 HEALIETRGASAKLIDNEQVI----------GEVLR-TQDNIKPVYVSVGHKVSLSTARD 191
Query: 271 MIVKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
I+K+T KYR+PE RQAD + L+ Q+
Sbjct: 192 WILKLTPKYRLPETTRQADQQVNRALKALQA 222
>gi|159038886|ref|YP_001538139.1| deoxyribonuclease V [Salinispora arenicola CNS-205]
gi|157917721|gb|ABV99148.1| Deoxyribonuclease V [Salinispora arenicola CNS-205]
Length = 242
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 116/205 (56%), Gaps = 19/205 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + G+D+S+ +A IV ++ +T ++ + + PYVPG LAFRE P+LL
Sbjct: 39 ELVAGLDVSYEVGTRRVAAAAIV-MESRTFEVREASDAFGEVNFPYVPGLLAFREVPILL 97
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L+ + R P+VL+ DG G+ HPR FGLA HIGVL L + GV K+ +
Sbjct: 98 EALEKLSCR-----PEVLVCDGYGIAHPRRFGLACHIGVLTGLPSFGVAKS-PFIGTFAE 151
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
G ++ + +++ +I+ G A+R T ++P+F+SVGH I LD A + +
Sbjct: 152 PGAKRGEWSPLSDDGEIV----------GRALR-TQACIRPVFVSVGHRIDLDQATDLTL 200
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQK 298
++ +YR+PE IR+AD SR+ L+K
Sbjct: 201 TLSRRYRIPEAIRKADFHSREALRK 225
>gi|150017482|ref|YP_001309736.1| deoxyribonuclease V [Clostridium beijerinckii NCIMB 8052]
gi|149903947|gb|ABR34780.1| Deoxyribonuclease V [Clostridium beijerinckii NCIMB 8052]
Length = 234
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 121/212 (57%), Gaps = 19/212 (8%)
Query: 94 LKYIGGVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
++YI G+D+++ +KED A C VV+D +T +I+ + ++ PY+PG LAFRE P+
Sbjct: 32 IRYIAGIDLAYWNKEDIEYAVCCAVVVDYKTKEIIEKAEYSGKIVFPYIPGCLAFRELPL 91
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+L + ++ P + + DGNG LHPR G+A+H G+ N TIGV K+ + +D
Sbjct: 92 VLEAVKKLQVN-----PDLYVFDGNGYLHPRHMGIATHAGIYLNKPTIGVAKSYYKIDNT 146
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
++ + E + DI +G +G +R+ D +KPIFIS+G+ I L+T+ +
Sbjct: 147 DF----EMPENIEGSYTDITI----NGEIYGRVLRTHKD-IKPIFISIGNHIDLETSTKV 197
Query: 273 VK--MTCKYRVPEPIRQADIRSRDY--LQKHQ 300
+K +T + +P P R ADI + L KH+
Sbjct: 198 IKSLVTKESHIPIPTRLADIETHKMRELYKHK 229
>gi|239618232|ref|YP_002941554.1| Deoxyribonuclease V [Kosmotoga olearia TBF 19.5.1]
gi|259511732|sp|C5CGG9.1|NFI_KOSOT RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|239507063|gb|ACR80550.1| Deoxyribonuclease V [Kosmotoga olearia TBF 19.5.1]
Length = 226
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 114/204 (55%), Gaps = 20/204 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+SF +++ + C++V+ TL+++ Y + +PYV GFL+FRE P+ +
Sbjct: 39 VAGVDVSFPQKNLGL---CVIVVMDDTLKVIESVYHTQEVHIPYVSGFLSFREGPIFIET 95
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ +K P + DG G+ HPRG G+A+H+G+L ++GV K+ H+ G +
Sbjct: 96 VKKLK-----IVPDLFFFDGQGIAHPRGLGIAAHMGLLLEKPSLGVAKS--HLFGSYNEP 148
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKM 275
R N D + +G G +R+ +T KP+F+S GH + +DTA+ + +K
Sbjct: 149 GR--------NKGDFSYMYNKTGEIIGTVLRTKKNT-KPVFVSPGHMMDVDTAMSLTLKY 199
Query: 276 TCKYRVPEPIRQADIRSRDYLQKH 299
T KYR+PEP RQA I ++ + H
Sbjct: 200 TGKYRLPEPTRQAHILTQRLRKNH 223
>gi|188996051|ref|YP_001930302.1| Deoxyribonuclease V [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931118|gb|ACD65748.1| Deoxyribonuclease V [Sulfurihydrogenibium sp. YO3AOP1]
Length = 226
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 118/208 (56%), Gaps = 18/208 (8%)
Query: 94 LKYIGGVDMSF--SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
++YI G+D +F ++P++A IVV+D+++ +IV + + + PYVP FLAFRE P
Sbjct: 30 IRYIAGIDTTFLNPYQNPTLAISSIVVIDIKSFEIVEKVLAEKEIDFPYVPTFLAFRELP 89
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
++L +K +AN V ++DG G+LHPR G+ASH GV+ + +IG GK + G
Sbjct: 90 IILEAYKKLKTKAN-----VFILDGQGILHPRRMGIASHFGVITDTVSIGCGKTPLY--G 142
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV- 270
Q D N D + G A+R+ +T KPIFIS G+ IS++ ++
Sbjct: 143 KYQDPPNQ--DLAYNFIYD-----PKTNEKIGYALRTKKNT-KPIFISPGNNISIENSLY 194
Query: 271 MIVKMTCKYRVPEPIRQADIRSRDYLQK 298
+I+K Y++PEP+R A DY +K
Sbjct: 195 VIIKSLNGYKLPEPVRLAHNFLSDYRKK 222
>gi|357014254|ref|ZP_09079253.1| endonuclease v [Paenibacillus elgii B69]
Length = 216
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 113/205 (55%), Gaps = 19/205 (9%)
Query: 86 TKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFL 145
KE++ + Y+ GVD+++S+ + IV+L+ +L++V + PY+PG
Sbjct: 15 VKEDQLKEVNYVAGVDVAYSEHSDKL-IAAIVILEASSLRLVESVVVEDTVHFPYIPGLF 73
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+FRE P LL +K PQ+++ DG G+ HPR FGLASH+GVL ++ TIG GK
Sbjct: 74 SFREIPPLLKAFKKIKTP-----PQLIVCDGQGMAHPRRFGLASHLGVLFDIPTIGCGKT 128
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
G Q + K + L+ G G +R T D +KPIF+S+GH IS
Sbjct: 129 -------KLLGEFQDPEVKRGFSS----LLVDHGEVIGAVLR-TQDNVKPIFVSIGHRIS 176
Query: 266 LDTAV-MIVKMTCKYRVPEPIRQAD 289
L TA I+K++ KYR+PE RQAD
Sbjct: 177 LATACEWILKLSPKYRLPETTRQAD 201
>gi|90023329|ref|YP_529156.1| endonuclease V [Saccharophagus degradans 2-40]
gi|89952929|gb|ABD82944.1| Endonuclease V [Saccharophagus degradans 2-40]
Length = 228
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 27/225 (12%)
Query: 82 TNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYV 141
T+ K++ ++ + GVD++++K + IVVL+ +TL++V + + ++Q PYV
Sbjct: 24 TSKVVKDDRYGHIQLVAGVDVAYAKNSDKL-IAAIVVLNAKTLEVVEKVTAEAKVQFPYV 82
Query: 142 PGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIG 201
PG +FRE P L+ +K P +++ DG G HPR FGLA H+GV+ ++ TIG
Sbjct: 83 PGLFSFRELPPLIKAFAKLKNS-----PDLIVCDGQGYAHPRRFGLACHLGVIFDVPTIG 137
Query: 202 VGKN--LHHVD--GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIF 257
GK L D GL V L+D NNE I G +R T + PI+
Sbjct: 138 CGKTRLLGEFDGVGLERGNVAPLVD----NNEVI-----------GNVLR-TQTGVNPIY 181
Query: 258 ISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
+S+GH ISL A ++K++ KYR+PE RQAD R+ L+ +S
Sbjct: 182 VSIGHRISLSAATNWVLKLSPKYRLPETTRQADHEVREKLKVEES 226
>gi|443323006|ref|ZP_21052018.1| deoxyinosine 3'endonuclease (endonuclease V) [Gloeocapsa sp. PCC
73106]
gi|442787310|gb|ELR97031.1| deoxyinosine 3'endonuclease (endonuclease V) [Gloeocapsa sp. PCC
73106]
Length = 213
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 125/243 (51%), Gaps = 38/243 (15%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L EIQ++L+ ++TED +KY+ GVD+ ++ I
Sbjct: 7 LAAAKEIQEQLRVSIVTEDQLGT-------------------VKYVAGVDVGINQGK-QI 46
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
A G + VL L+++ L L PY+PGFL+FRE P ++ L ++ P +
Sbjct: 47 AQGAVAVLSFPELELIESATYLCPLSFPYIPGFLSFREIPPIMGALARLQTT-----PDL 101
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
++ DG G+ H R FGLA H+G+L+NL TIGV K+L G + L + E +
Sbjct: 102 ILCDGQGIAHQRRFGLACHLGILSNLPTIGVAKSL-------LVGTYEPLAPHKGAWEPL 154
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADI 290
I G +R T +KP+++S+GH ISL+TA+ +++ T KYR+PE R+AD
Sbjct: 155 I----DQQEVIGAVVR-TRSGVKPLYVSIGHRISLETAIEYVLRCTTKYRLPETTRRADR 209
Query: 291 RSR 293
SR
Sbjct: 210 LSR 212
>gi|390437573|ref|ZP_10226111.1| endonuclease V [Pantoea agglomerans IG1]
Length = 222
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 26/216 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F +E +I +V+L+ +L++V + + +PY+PGFL+FRE P L+
Sbjct: 29 RFIGGADVGFEQEG-TITRAAMVILEYPSLKLVEHRIARVETTMPYIPGFLSFREYPALM 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 88 AAWQMLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKS-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G LDA+ + + +I G W +R P+F++ GH +SLDTA+ V+
Sbjct: 136 CGRFADLDAQPGSRQSLIDKGEQIGWVWRSKLRCN-----PLFVATGHRVSLDTALQWVE 190
Query: 275 -MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
T YR+PEP R AD + + QRWQ
Sbjct: 191 NCTRGYRLPEPTRWADAVA-------SNRTAFQRWQ 219
>gi|428316463|ref|YP_007114345.1| Endonuclease V [Oscillatoria nigro-viridis PCC 7112]
gi|428240143|gb|AFZ05929.1| Endonuclease V [Oscillatoria nigro-viridis PCC 7112]
Length = 215
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 108/201 (53%), Gaps = 27/201 (13%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ GVD+ + + ++ + VL LQ+ + PY+PGFL+FRE P +
Sbjct: 34 VRYVAGVDVGYDSAN-DVSRAAVTVLSFPDLQLQQQAVVRSPTTFPYIPGFLSFREVPAV 92
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHV 209
L L+N+ R P +++ DG GL HPR FGLA H+GVL + TIGV KN H
Sbjct: 93 LEALENISLR-----PDLILCDGQGLAHPRRFGLACHLGVLTGIATIGVAKNRFIGEHSE 147
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
GL + LL SGST G A+R T +KPI++S+GH ++L +A
Sbjct: 148 VGLDRGSWQPLLR---------------SGSTIGAALR-TQTGVKPIYVSIGHKVNLISA 191
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
+ +++ KYR+PE R AD
Sbjct: 192 IEYVLRCAPKYRLPETTRSAD 212
>gi|15606007|ref|NP_213384.1| hypothetical protein aq_548 [Aquifex aeolicus VF5]
gi|2983195|gb|AAC06795.1| hypothetical protein aq_548 [Aquifex aeolicus VF5]
Length = 188
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 104/192 (54%), Gaps = 21/192 (10%)
Query: 100 VDMSFSK--EDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
+D++F K E+P+ A +VV++L+TL+ VY+ + PY+P FLAFRE P+LL L
Sbjct: 1 MDLTFEKINENPTRAWASLVVVELKTLKPVYQHVVKDIVDFPYIPTFLAFREMPLLLKLY 60
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGV 217
+ K + P V +DG G+ HPRG G+ASH GV T+GV K+
Sbjct: 61 ETAKVK-----PDVYFIDGQGIAHPRGCGIASHFGVETGEVTVGVAKS------------ 103
Query: 218 RQLLDAKENN-NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ AKE + G G +R T D P+++SVGH ISL TA+ +V T
Sbjct: 104 KLFGYAKEPAPQRGSYTYLKYKGKIIGAVVR-TKDNTAPVYVSVGHRISLKTAIDLVLKT 162
Query: 277 CKYRVPEPIRQA 288
KYRVPEP R A
Sbjct: 163 SKYRVPEPTRLA 174
>gi|157363356|ref|YP_001470123.1| deoxyribonuclease V [Thermotoga lettingae TMO]
gi|157313960|gb|ABV33059.1| Deoxyribonuclease V [Thermotoga lettingae TMO]
Length = 225
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 30/203 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+SF KED C IVVL+ TL+IV + + PY+PG LAFRE PV L
Sbjct: 36 VAGVDLSFPKEDQ--GCAVIVVLNFPTLKIVDYVTEVSNISFPYIPGLLAFREGPVFLRA 93
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL---- 212
+ +K R P V+M DG G+ HPR G+A+H+G+ NL TIGV K+ H+ G
Sbjct: 94 WEKLKIR-----PDVVMFDGQGIAHPRRIGIAAHMGLFINLPTIGVAKS--HLYGTYKQP 146
Query: 213 -THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
H G + + + +II G +R T + KP+F+S GH + +A+
Sbjct: 147 GKHKGEYEFI----YDESEII----------GAVIR-TKNNCKPVFVSPGHKCDVQSAIE 191
Query: 272 IVKMTC-KYRVPEPIRQADIRSR 293
+V C YR+PEP R A + S+
Sbjct: 192 LVLSCCVGYRLPEPTRIAHLISQ 214
>gi|158333530|ref|YP_001514702.1| endonuclease V [Acaryochloris marina MBIC11017]
gi|158303771|gb|ABW25388.1| endonuclease V [Acaryochloris marina MBIC11017]
Length = 226
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 116/212 (54%), Gaps = 19/212 (8%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
+E++ L+ + GVD+ F +D IAC + VL L L++ L + PYVPG LA
Sbjct: 29 REDDFGPLETVAGVDVGFEDKD-QIACAVVAVLRLSDLKVQESVAIRLPVTFPYVPGLLA 87
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P+++ L ++K R P +L+ DGNG +HPR G A H+G+++ L +IGV K
Sbjct: 88 FREVPIVMEALASLKTR-----PGLLICDGNGTIHPRRCGFACHLGIVSGLPSIGVAKT- 141
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
G Q L + P+ G G G A+R T +KPIF+S+GH ISL
Sbjct: 142 ------PFIGEFQPLADDRGAWQ---PITDG-GEVIGAALR-TQTKVKPIFVSIGHRISL 190
Query: 267 DTAV-MIVKMTCKYRVPEPIRQADIRSRDYLQ 297
+A+ ++++ YR+PE RQAD S+ Q
Sbjct: 191 QSAIDLVLQCAPAYRLPETTRQADQLSKGNAQ 222
>gi|372277993|ref|ZP_09514029.1| endonuclease V [Pantoea sp. SL1_M5]
Length = 222
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 26/216 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F +E +I +V+L+ +L++V + + +PY+PGFL+FRE P L+
Sbjct: 29 RFIGGADVGFEQEG-TITRAAMVILEYPSLKLVEHRIARVETTMPYIPGFLSFREYPALM 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 88 AAWQMLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKS-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G LDA+ + + +I G W +R P+F++ GH +SLDTA+ V+
Sbjct: 136 CGRFADLDAQPGSRQPLIDKGEQIGWVWRSKLRCN-----PLFVATGHRVSLDTALQWVE 190
Query: 275 -MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
T YR+PEP R AD + + QRWQ
Sbjct: 191 NCTRGYRLPEPTRWADAVA-------SNRTAFQRWQ 219
>gi|408527901|emb|CCK26075.1| Endonuclease V [Streptomyces davawensis JCM 4913]
Length = 376
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 36/241 (14%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QDEL+ R++ ++ P T T GVD+++ E + V
Sbjct: 20 VQDELRARVVLDEP---GPPPGTGQVT--------------GVDVAYDDEL-DVVAAAAV 61
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
LD TL++V E ++ R+ PYVPG LAFRE P +L+ LD + P +++ DG
Sbjct: 62 TLDAATLEVVAEATAVGRISFPYVPGLLAFREIPTVLAALDALPGP-----PGLVVCDGY 116
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
GL HPR FGLASH+GVL L TIGV KN T S D +PL+ G
Sbjct: 117 GLAHPRRFGLASHLGVLTGLPTIGVAKNP-----FTFS-----YDEPGAARGSAVPLVSG 166
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYL 296
+ G A+R T + +KP+F+SVGH +SLD A ++ +T YR+PE R+AD R L
Sbjct: 167 TEEV-GRALR-TREAVKPVFVSVGHRVSLDNACAHVLALTPSYRLPETTRRADALCRKAL 224
Query: 297 Q 297
+
Sbjct: 225 R 225
>gi|443923976|gb|ELU43060.1| RNA polymerase rpb8 domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 455
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 124/236 (52%), Gaps = 36/236 (15%)
Query: 94 LKYIGGVDMSF----------------SKEDPSI--ACGCIVVLDLQTLQIVYEDYSLLR 135
L+Y+GG+D+SF + DP++ A I VL+ +L +V+ +R
Sbjct: 206 LRYVGGLDISFIAQEGESAETVGSPGHNASDPNVPDAYAVITVLEYPSLSLVHSLTHPIR 265
Query: 136 LQVPYVPGFLAFREAPVLLSLL----DNMKKRAN-HFYPQVLMVDGNGLLHPRGFGLASH 190
L PY+P FL++RE P L L+ +N++K H +PQV++VDGNG LH R G+A+
Sbjct: 266 LTAPYIPSFLSYRETPAYLELISKLRENLQKAGKEHEFPQVILVDGNGQLHEREAGVATA 325
Query: 191 IGVLANLTTIGVGKNLH-----HVDG------LTHSGVRQLLDAKENNNEDIIPLMGGSG 239
+GV A++ T+GV K H H + L+ G++Q D + ++
Sbjct: 326 VGVQADVPTVGVAKTYHPPTLQHHEAHDLHWRLSQKGMKQKSREVLKKPGDYLGVLNARR 385
Query: 240 STW-GVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRD 294
+ GVA+RS + +++S GH +S+ A+ + +YR+PEPIR AD RD
Sbjct: 386 DRYVGVALRSATSS-NFLYVSPGHRVSMIQAIRLTMALSRYRIPEPIRLADRLGRD 440
>gi|46446257|ref|YP_007622.1| endonuclease V [Candidatus Protochlamydia amoebophila UWE25]
gi|56404374|sp|Q6MDK2.1|NFI_PARUW RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|46399898|emb|CAF23347.1| probable endonuclease V (deoxyinosine 3'endonuclease) [Candidatus
Protochlamydia amoebophila UWE25]
Length = 235
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 126/252 (50%), Gaps = 37/252 (14%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS- 110
+ + T IQ EL R+ ED F N P ++ GG+D+S + DP
Sbjct: 17 IEKATIIQKELANRICLEDEF--NTP-----------------EFFGGMDVSNNLFDPKQ 57
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
I ++LD + L + + + R PY+PGFL FREAP L+ L+++ K P
Sbjct: 58 IIYATAILLDSKMLSVQFHNSVSQRQTFPYIPGFLGFREAPALIDALESLPK-----LPD 112
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
++ VDG G+ HPR G+ASHIGVL N+ TIGV KN+ + G + D
Sbjct: 113 MIFVDGQGISHPRRLGIASHIGVLVNIPTIGVAKNILFGEPKKDLG---------SCVGD 163
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
+ + G G +R T KP+ IS GH +SL TA+ V K YR+PEP RQA
Sbjct: 164 YV-FLYAYGKEIGALVR-TKLRCKPLIISTGHRVSLRTAIEYVLNCVKGYRLPEPTRQAH 221
Query: 290 IRSRDYLQKHQS 301
+ + + ++ Q+
Sbjct: 222 LAANAFRKQSQA 233
>gi|434405030|ref|YP_007147915.1| deoxyinosine 3'endonuclease (endonuclease V) [Cylindrospermum
stagnale PCC 7417]
gi|428259285|gb|AFZ25235.1| deoxyinosine 3'endonuclease (endonuclease V) [Cylindrospermum
stagnale PCC 7417]
Length = 221
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 116/213 (54%), Gaps = 19/213 (8%)
Query: 78 NSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQ 137
S T T ++ + ++Y+ GVDM F ED +++ + VL LQ+V +
Sbjct: 21 ESLQTQVITTDQLKEPVQYVAGVDMGF-LEDGTVSRAAVAVLSFPDLQVVETSLAYRPTT 79
Query: 138 VPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANL 197
PY+PGFL+FRE P +L L+ +K P +++ DG G+ HPR FG+A H+G+L ++
Sbjct: 80 FPYIPGFLSFREIPAVLDALEKIK-----ITPHIILCDGQGIAHPRRFGIACHLGLLLDM 134
Query: 198 TTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIF 257
TIGV K+L G + L + + + +I G G +R T +KP++
Sbjct: 135 PTIGVAKSL-------LIGKHEELPDTKGSWQPLI----HQGDKIGAVLR-TRTGVKPVY 182
Query: 258 ISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+S GH ISL TA+ +++ T KYR+PE R AD
Sbjct: 183 VSSGHRISLPTAIDYVLRCTLKYRLPETTRIAD 215
>gi|167381577|ref|XP_001735773.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902099|gb|EDR28009.1| hypothetical protein EDI_122200 [Entamoeba dispar SAW760]
Length = 422
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 19/196 (9%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
G+D+SFS +A GC+V+ + P L E V LL+
Sbjct: 2 GLDISFSTNHTDLAIGCLVIC-----------------EYPSGKELLTLTEVEVYHELLN 44
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVR 218
N K++ YP+V++VDGNG HPR FG A+H+G+ ++ +IGV K + VDG+ +
Sbjct: 45 NCKEKYPELYPEVVLVDGNGYYHPRRFGSATHVGICCDIPSIGVAKTVLCVDGIGKKEIN 104
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK 278
+ + I SG +RS ++ PI +S GH +SL TAV+I K C
Sbjct: 105 IVTSQIKAGESTTIS--TSSGEVLCGVIRSRGGSINPIVVSCGHKVSLSTAVIICKECCL 162
Query: 279 YRVPEPIRQADIRSRD 294
+++PEPIR AD+ SR+
Sbjct: 163 HKIPEPIRLADLISRN 178
>gi|440683446|ref|YP_007158241.1| Endonuclease V [Anabaena cylindrica PCC 7122]
gi|428680565|gb|AFZ59331.1| Endonuclease V [Anabaena cylindrica PCC 7122]
Length = 221
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 50/255 (19%)
Query: 51 QLNQWTE-------IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMS 103
Q++ W IQ+ L+ ++IT D N P +KY+ GVDM
Sbjct: 5 QIHSWPSTVEEAITIQETLQNQVITTDVL--NEP----------------IKYVAGVDMG 46
Query: 104 FSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKR 163
F ED +I+ + VL LQ+V + PY+PGFL+FRE P LL L+ ++
Sbjct: 47 FV-EDGTISRAAVAVLSFPDLQVVETSLAYRPTTFPYIPGFLSFREIPALLDALEKIQT- 104
Query: 164 ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQL 220
P +++ DG G+ HPR G+A H+GV+ ++ TIGV K+L H + G Q
Sbjct: 105 ----IPDIILCDGQGIAHPRRLGIACHLGVIVDIPTIGVAKSLLIGKHEELPEAKGSWQP 160
Query: 221 LDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKY 279
L K+ T G +R T +KP++IS GH ISL TA+ +++ T KY
Sbjct: 161 LIHKKE--------------TIGAVLR-TRSGVKPLYISSGHRISLPTAIDYVLRCTPKY 205
Query: 280 RVPEPIRQADIRSRD 294
R+PE R AD + D
Sbjct: 206 RLPETTRIADKLASD 220
>gi|389843590|ref|YP_006345670.1| deoxyinosine 3'endonuclease [Mesotoga prima MesG1.Ag.4.2]
gi|387858336|gb|AFK06427.1| deoxyinosine 3'endonuclease (endonuclease V) [Mesotoga prima
MesG1.Ag.4.2]
Length = 225
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 127/240 (52%), Gaps = 43/240 (17%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
Q ++Q +L+ +L ED+ ++E + + G+D+SF + IA
Sbjct: 15 QAIDLQKKLRDKLTFEDY--------------SREP-----RLVAGIDVSFPFRE--IAL 53
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV-- 171
IV+++ +L IV +SL +++ PY+PG L+FRE P +L L P+V
Sbjct: 54 AVIVIMEFNSLSIVDHFFSLKKVETPYIPGLLSFREGPAILDALSRS--------PEVDL 105
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L DG+G+ HPRG G+ASHIG+ + TIGV K+ L + V L K ++ +
Sbjct: 106 LFFDGHGIAHPRGIGIASHIGLFVEIPTIGVAKS------LLYGKVESLPREKGQSSRIL 159
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VKMTCKYRVPEPIRQADI 290
P G G A+ T ++KP+FIS G+ I+ ++A+ + ++ KYR+PEP RQA I
Sbjct: 160 SP----GGRLLGYAL-CTRTSVKPVFISPGNRITAESALRLSIRTIGKYRIPEPTRQAHI 214
>gi|359463080|ref|ZP_09251643.1| endonuclease V [Acaryochloris sp. CCMEE 5410]
Length = 226
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 129/242 (53%), Gaps = 40/242 (16%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+Q++L+ ++I ED F L+ + GVD+ F +D IAC +
Sbjct: 19 LQEKLRHQVIQEDDFGP-------------------LETVAGVDVGFEDQD-QIACAAVA 58
Query: 118 VLDLQTLQIVYEDYSLLR-LQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDG 176
VL L L+ V E ++ R + PYVPG LAFRE P+++ L ++K + P +L+ DG
Sbjct: 59 VLRLSDLK-VQESVAIRRPVTFPYVPGLLAFREVPIVMEALASLKTQ-----PGLLICDG 112
Query: 177 NGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMG 236
NG +HPR G A H+G+++ L +IGV K + G Q L ++ P+
Sbjct: 113 NGTIHPRRCGFACHLGIVSGLPSIGVAKT-------PYIGEFQPL---ADDRGAWQPITD 162
Query: 237 GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSRDY 295
G G G A+R T +KPIF+S+GH ISL +A+ ++++ YR+PE RQAD S+
Sbjct: 163 G-GEVIGAALR-TQTKVKPIFVSIGHRISLQSAIDLVLQCAPAYRLPETTRQADQLSKGN 220
Query: 296 LQ 297
Q
Sbjct: 221 AQ 222
>gi|308188918|ref|YP_003933049.1| endonuclease V [Pantoea vagans C9-1]
gi|308059428|gb|ADO11600.1| putative endonuclease V [Pantoea vagans C9-1]
Length = 222
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 117/216 (54%), Gaps = 26/216 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F ++D +I +V+L+ +L +V + + +PY+PGFL+FRE P L+
Sbjct: 29 RFIGGADVGF-EQDGTITRAAMVILEYPSLTLVEHRIARVETTMPYIPGFLSFREYPALM 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 88 AAWQMLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKS-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G LDA+ + + +I G W +R P+F++ GH +SLDTA+ V+
Sbjct: 136 CGRFDDLDAQPGSRQPLIDKGEQIGWVWRSKLRC-----NPLFVATGHRVSLDTALQWVE 190
Query: 275 -MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
T YR+PEP R AD + + QRWQ
Sbjct: 191 NCTRGYRLPEPTRWADAVA-------SNRTAFQRWQ 219
>gi|218441808|ref|YP_002380137.1| endonuclease V [Cyanothece sp. PCC 7424]
gi|218174536|gb|ACK73269.1| Deoxyribonuclease V [Cyanothece sp. PCC 7424]
Length = 227
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 19/202 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ GVD+ F K++ +I + VL L++V + L PY+PGFL+FRE P +
Sbjct: 39 IRYVAGVDVGF-KDNYTITQAAVAVLTFPELELVDKAIVTLPTCFPYIPGFLSFREVPGI 97
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L+ + P +++ DG G+ HPR FG+A H+GVL ++ TIGV K++
Sbjct: 98 LKALEKLT-----ITPNLMICDGQGIAHPRRFGIACHLGVLIDVPTIGVAKSI------- 145
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G L ++ + D+I G T GV +RS + +KP+++S+GH ISL TAV +
Sbjct: 146 LVGKHSDLPPEKGSRVDLI----YKGKTIGVVLRSRTN-VKPLYVSIGHKISLTTAVDYV 200
Query: 273 VKMTCKYRVPEPIRQADIRSRD 294
KYR+PE R AD SR+
Sbjct: 201 FNCLTKYRLPETTRLADKLSRE 222
>gi|322392602|ref|ZP_08066062.1| deoxyribonuclease V [Streptococcus peroris ATCC 700780]
gi|321144594|gb|EFX39995.1| deoxyribonuclease V [Streptococcus peroris ATCC 700780]
Length = 206
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 113/200 (56%), Gaps = 17/200 (8%)
Query: 94 LKYIGGVDMSFSKE-DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
++Y+ GVD+++ KE D CIVV+D +T++++ E + VPY+P +LAFRE P+
Sbjct: 10 IQYVAGVDLAYWKEGDKEYGVACIVVIDRRTMEVLEEVSYSDEIHVPYLPSYLAFRELPL 69
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+L + + + P + M DGNG LHPR G+A+H N TIGV KN +H+DG
Sbjct: 70 ILEAVKLLISK-----PDLYMFDGNGYLHPRNMGIATHASFYLNKPTIGVAKNYYHIDGA 124
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
++ + + +E +I+ G +G +R+ D +KPI+IS G+ I+L+T
Sbjct: 125 QYT----VPENREGAYTNIVK----DGKIYGQVLRTHQD-VKPIYISCGNWINLETTREF 175
Query: 273 VK--MTCKYRVPEPIRQADI 290
V +T R+P R ADI
Sbjct: 176 VLEFVTKDSRLPITTRFADI 195
>gi|257057317|ref|YP_003135149.1| Endonuclease V [Saccharomonospora viridis DSM 43017]
gi|256587189|gb|ACU98322.1| Endonuclease V [Saccharomonospora viridis DSM 43017]
Length = 234
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 110/207 (53%), Gaps = 19/207 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+++ ++ IA +VVLD TL++V +L PY PG AFRE P +
Sbjct: 37 VRTVAGVDVAYDRDSSRIAA-AVVVLDYTTLEVVQTSTALSTATFPYEPGLFAFRELPAV 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ L R P +L+ DG+GL HPR FGLA H+GVL + T GV K + +
Sbjct: 96 VEAL-----RGLSVDPDLLVCDGHGLAHPRRFGLACHLGVLTGIPTFGVAKTV-FIGEFA 149
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
R+ + + D++ G A+R T +KP+F+SVGH ISLDTA
Sbjct: 150 PPATRRGSWSPLIVDTDVV----------GAALR-TRSGVKPVFVSVGHRISLDTAREHT 198
Query: 274 KMTC-KYRVPEPIRQADIRSRDYLQKH 299
C +YR+PE RQAD SR L +H
Sbjct: 199 LTLCTQYRLPETTRQADRLSRTTLIEH 225
>gi|300721650|ref|YP_003710925.1| endonuclease V [Xenorhabdus nematophila ATCC 19061]
gi|297628142|emb|CBJ88693.1| endonuclease V (deoxyinosine 3'endoduclease) [Xenorhabdus
nematophila ATCC 19061]
Length = 225
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 119/235 (50%), Gaps = 41/235 (17%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
Q E +R+I D F T+ T T +I G D+ F + D ++ I V
Sbjct: 11 QIEKSRRVIRHDVFA-------TSFTPT---------FIAGADVGF-ENDGTVTRAAIAV 53
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
L +L++V + + +PY+PG L+FRE P LL+ +K+R P +LMVDG G
Sbjct: 54 LQYPSLELVEYQIARIATVLPYIPGLLSFREYPALLAAWQKIKQR-----PDLLMVDGQG 108
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNNEDIIPLM 235
+ HPR FG+ASH G+L ++ TIGV K+ H G RQ PLM
Sbjct: 109 IAHPRRFGIASHFGLLVDVPTIGVAKSRLCGEHAPVGDTPGSRQ-------------PLM 155
Query: 236 GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
G GV +RS P++IS+GH IS+ +A+ V+ K YR+PEP R AD
Sbjct: 156 -DHGEQIGVVLRSK-KRCNPLYISIGHQISIHSAIFWVEQCMKGYRLPEPTRWAD 208
>gi|375102658|ref|ZP_09748921.1| deoxyinosine 3'endonuclease (endonuclease V) [Saccharomonospora
cyanea NA-134]
gi|374663390|gb|EHR63268.1| deoxyinosine 3'endonuclease (endonuclease V) [Saccharomonospora
cyanea NA-134]
Length = 232
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 111/209 (53%), Gaps = 19/209 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+++ ++ P +A + VLD TL+ + + PY PG AFRE P L
Sbjct: 37 VRTVAGVDVAYDRDSPRLAA-AVTVLDHDTLEEIETSSVVTTTDFPYEPGLFAFRELPAL 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ L +++ P +L+ DG+GL HPR FGLA H+GVL + T GV K +
Sbjct: 96 VEALRSLRT-----TPDLLVCDGHGLAHPRRFGLACHLGVLTGVPTFGVAKTVF------ 144
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA-VMI 272
V + + + PL G G A+R T D +KP+F+SVGH ISLDTA
Sbjct: 145 ---VGEFVPPASSRGS-TSPLT-VDGEVVGAAVR-TRDGVKPVFVSVGHRISLDTASAHT 198
Query: 273 VKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
+ ++ YR+PE R+AD SR+ L S
Sbjct: 199 LTLSRNYRLPETTRRADRLSREVLAGRVS 227
>gi|332709134|ref|ZP_08429101.1| endonuclease V [Moorea producens 3L]
gi|332352045|gb|EGJ31618.1| endonuclease V [Moorea producens 3L]
Length = 219
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ GVD+ F +ED +I+ + VL LQ+ + PYVPGFL+FRE PV+
Sbjct: 36 VQYVAGVDVGF-EEDGAISQAAVAVLSFPDLQLRENAIARRPTTFPYVPGFLSFREVPVV 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L+ + P +++ DG G+ HPR FGLA H+GVL ++ TIGV K+ D
Sbjct: 95 LDALEKIS-----IIPDLILCDGQGIAHPRRFGLACHLGVLTDIPTIGVAKSRFIGDH-- 147
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
QL + K N PL G G +R T +KP+++S+GH ISL TA+ +
Sbjct: 148 ----EQLPENKGNWQ----PLR-DDGEIIGAVVR-TRTGVKPVYVSIGHRISLPTAIDYV 197
Query: 273 VKMTCKYRVPEPIRQAD 289
++ T +YR+PE R AD
Sbjct: 198 LRCTSRYRLPETTRWAD 214
>gi|434400028|ref|YP_007134032.1| Endonuclease V [Stanieria cyanosphaera PCC 7437]
gi|428271125|gb|AFZ37066.1| Endonuclease V [Stanieria cyanosphaera PCC 7437]
Length = 219
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 130/246 (52%), Gaps = 40/246 (16%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
PA + + +IQ+EL+ ++I ED + EV Y+ GVD+ F
Sbjct: 7 PAWVKTVEEAKKIQEELRFKVIQEDRLS-----------------EV--NYVAGVDVGF- 46
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
K + +I + VL+ L +V + + + PY+PGFL+FRE P ++ L +
Sbjct: 47 KNNYTITQAAVAVLNYPELTLVEQALATIPTTFPYIPGFLSFREIPAIIEALKQLT---- 102
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE 225
P +++ DG G+ HPR G+ASH+GVL ++ TIGV K++ G Q + ++
Sbjct: 103 -ITPDLILCDGQGIAHPRRLGIASHLGVLIDVPTIGVAKSI-------LIGKHQEVPPEK 154
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPE 283
+ +I G T GV +RS + +KPI+IS+GH ISL+TA+ V M C KYR+PE
Sbjct: 155 GSWTPLI----DRGETIGVVLRSRFN-VKPIYISIGHKISLNTAINYV-MGCLTKYRLPE 208
Query: 284 PIRQAD 289
R AD
Sbjct: 209 TTRWAD 214
>gi|159899443|ref|YP_001545690.1| deoxyribonuclease V [Herpetosiphon aurantiacus DSM 785]
gi|159892482|gb|ABX05562.1| Deoxyribonuclease V [Herpetosiphon aurantiacus DSM 785]
Length = 232
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 19/202 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ + GVD +F ++D + IV+L+ LQ V + PY+PG L+FRE P +
Sbjct: 40 LQTVAGVDAAF-EDDGATTRAAIVILNFPALQPVEKTLVRRPTNFPYIPGLLSFREIPAV 98
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L+ +++ P VL+ DG G++HPR FG+A+H+GVL +L TIGVGK+ ++ G T
Sbjct: 99 LAALEQLQQ-----LPDVLLCDGMGIMHPRRFGIAAHLGVLTDLPTIGVGKS--YLCG-T 150
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
H V N +P+ +G G +R+ T P++IS GH +S+ TAV ++
Sbjct: 151 HEPV-------PNQQGAWVPVY-DAGEQIGAVVRTRVGT-NPLYISPGHRVSISTAVDLV 201
Query: 273 VKMTCKYRVPEPIRQADIRSRD 294
+ T KYR+PE R AD S+D
Sbjct: 202 LGCTTKYRLPETTRHADQLSKD 223
>gi|302876113|ref|YP_003844746.1| Deoxyribonuclease V [Clostridium cellulovorans 743B]
gi|307686838|ref|ZP_07629284.1| Deoxyribonuclease V [Clostridium cellulovorans 743B]
gi|302578970|gb|ADL52982.1| Deoxyribonuclease V [Clostridium cellulovorans 743B]
Length = 234
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 129/242 (53%), Gaps = 34/242 (14%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF-SKEDPSIA 112
++ IQ++LKK++ +L N+ + N+ +K + GVD+++ KE+
Sbjct: 16 EFINIQNQLKKKI--------SLKNTFSKNS---------IKLVAGVDLAYWEKENKQYG 58
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
CIVV+D T Q+V + S+ ++VPY+PGFLAFRE P++ L + P +
Sbjct: 59 TCCIVVIDYNTKQVVEKVNSVGEIKVPYIPGFLAFRELPLVTEALKKLVVE-----PDIF 113
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
+ DGNG LH G+A+H N TIGV K+ V+ Q+ +E + DII
Sbjct: 114 IFDGNGYLHFNHMGIATHASFFLNKPTIGVAKSYLRVNEADF----QMPQNEEGSFTDII 169
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV--KMTCKYRVPEPIRQADI 290
+G +G +R+ D +KPIFIS G+ I L+T+ IV + + R+P P+R AD+
Sbjct: 170 I----NGEVYGRVLRTRED-VKPIFISCGNYIDLETSTEIVLNLINNESRLPIPVRLADL 224
Query: 291 RS 292
+
Sbjct: 225 ET 226
>gi|289767708|ref|ZP_06527086.1| endonuclease V [Streptomyces lividans TK24]
gi|289697907|gb|EFD65336.1| endonuclease V [Streptomyces lividans TK24]
Length = 233
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 124/241 (51%), Gaps = 36/241 (14%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QDEL+ R++ ++ P T T GVD+++ E + V
Sbjct: 22 VQDELRARVVLDE---PGPPPGTGRVT--------------GVDVAYDDER-DVVAAAAV 63
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VLD TL +V E ++ R+ PYVPG LAFRE P +L+ L+ + P +++ DG
Sbjct: 64 VLDAGTLAVVAEATAVGRISFPYVPGLLAFREIPTVLAALEALP-----CPPGLVVCDGY 118
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
GL HPR FGLASH+GVL L TIGV KN TH D + PL+ G
Sbjct: 119 GLAHPRRFGLASHLGVLTGLPTIGVAKNPFT---FTH-------DDPDTPRGSTSPLLAG 168
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISL-DTAVMIVKMTCKYRVPEPIRQADIRSRDYL 296
+ G A+R T D +KP+F+SVGH + L +T + +T YR+PE R+AD R L
Sbjct: 169 A-EEVGRAVR-TRDGVKPVFVSVGHRVGLGNTCAHTLALTPAYRLPETTRRADALCRAAL 226
Query: 297 Q 297
+
Sbjct: 227 R 227
>gi|334117230|ref|ZP_08491322.1| Endonuclease V [Microcoleus vaginatus FGP-2]
gi|333462050|gb|EGK90655.1| Endonuclease V [Microcoleus vaginatus FGP-2]
Length = 217
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 107/201 (53%), Gaps = 27/201 (13%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ GVD+ + + ++ + VL LQ+ + PY+PGFL+FRE P +
Sbjct: 34 VRYVAGVDVGYDSAN-DVSRAAVTVLSFPDLQLQQQAVVRSPTTFPYIPGFLSFREVPAV 92
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHV 209
L L+N+ R P +++ DG GL HPR FGLA H+GVL + TIGV KN H
Sbjct: 93 LEALENISLR-----PDLILCDGQGLAHPRRFGLACHLGVLTGIATIGVAKNRFIGEHSE 147
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
GL + LL GST G A+R T +KPI++S+GH ++L TA
Sbjct: 148 VGLDRGSWQPLLL---------------EGSTVGAALR-TQTGVKPIYVSIGHKVNLITA 191
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
+ +++ KYR+PE R AD
Sbjct: 192 IEYVLRCAPKYRLPETTRSAD 212
>gi|378769157|ref|YP_005197632.1| deoxyribonuclease V [Pantoea ananatis LMG 5342]
gi|386017959|ref|YP_005936260.1| endonuclease V Nfi [Pantoea ananatis AJ13355]
gi|386081233|ref|YP_005994758.1| endonuclease V Nfi [Pantoea ananatis PA13]
gi|327396042|dbj|BAK13464.1| endonuclease V Nfi [Pantoea ananatis AJ13355]
gi|354990414|gb|AER34538.1| endonuclease V Nfi [Pantoea ananatis PA13]
gi|365188645|emb|CCF11595.1| deoxyribonuclease V [Pantoea ananatis LMG 5342]
Length = 222
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 113/199 (56%), Gaps = 25/199 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F +E ++ +V+L+ ++++V + + +PY+PGFL+FRE P LL
Sbjct: 29 RFIGGADVGFEQEG-AVTRAALVILEYPSMKLVEYRIARIDTTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGL 212
+ D ++++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K HV+ L
Sbjct: 88 AAWDMLEQK-----PDLLFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKKRLCGHVEAL 142
Query: 213 THS-GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
+ G RQ L + E I G W R P+F++ GH +SLD+A+
Sbjct: 143 DETPGSRQPL---MDKGEQI-------GWVWRSKARCN-----PLFVATGHRVSLDSALE 187
Query: 272 IV-KMTCKYRVPEPIRQAD 289
V K T YR+PEP R AD
Sbjct: 188 WVEKCTQGYRLPEPTRWAD 206
>gi|428301965|ref|YP_007140271.1| Endonuclease V [Calothrix sp. PCC 6303]
gi|428238509|gb|AFZ04299.1| Endonuclease V [Calothrix sp. PCC 6303]
Length = 221
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 107/200 (53%), Gaps = 25/200 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ GVDM F+ ED ++ + VL LQ+V + + PY+PGFL+FRE P L
Sbjct: 37 IQYVAGVDMGFT-EDGKVSRAAVAVLSFPDLQLVETSIAYRPTEFPYIPGFLSFREIPAL 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDG 211
L L +K P +++ DG G HPR FG+A H+G+L ++ TIGV K+ + D
Sbjct: 96 LDALQKIKTT-----PDMILCDGQGTAHPRRFGIACHLGLLVDIPTIGVAKSWFIGQHDA 150
Query: 212 LTHS-GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
L + G Q L K G T G +R T +KP+++S GH ISL TA+
Sbjct: 151 LADTKGSWQPLTDK--------------GETIGAVLR-TRSGVKPVYVSPGHRISLATAI 195
Query: 271 -MIVKMTCKYRVPEPIRQAD 289
+ T KYR+PE R AD
Sbjct: 196 EYTLNCTTKYRLPETTRIAD 215
>gi|428308851|ref|YP_007119828.1| deoxyinosine 3'endonuclease [Microcoleus sp. PCC 7113]
gi|428250463|gb|AFZ16422.1| deoxyinosine 3'endonuclease (endonuclease V) [Microcoleus sp. PCC
7113]
Length = 221
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 121/236 (51%), Gaps = 44/236 (18%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
IQ++L+ +ITED + EV +Y+ GVD+ F + D +I+ +
Sbjct: 19 IQNQLQPEVITED-----------------QLGEV--QYVAGVDVGF-ENDYAISRAAVA 58
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VL LQ+V + + PYVPGFL+FRE PV++ L+ + P +++ DG
Sbjct: 59 VLSFPDLQLVEQAIARRPTTFPYVPGFLSFREVPVVIDALEQVST-----IPDLILCDGQ 113
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNNEDIIPL 234
G+ HPR FGLA H+GVL N+ TIGV K+L H + G Q L K
Sbjct: 114 GIAHPRRFGLACHLGVLTNMPTIGVAKSLLIGKHEELPVEKGSWQPLRYK---------- 163
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
G G +RS ++P+++S GH ISLDTA+ ++ KYR+PE R AD
Sbjct: 164 ----GGIVGAVLRSR-TGVRPLYVSPGHRISLDTAIDYTLRCITKYRLPETTRWAD 214
>gi|386843704|ref|YP_006248762.1| endonuclease [Streptomyces hygroscopicus subsp. jinggangensis 5008]
gi|374104005|gb|AEY92889.1| endonuclease [Streptomyces hygroscopicus subsp. jinggangensis 5008]
gi|451796996|gb|AGF67045.1| endonuclease [Streptomyces hygroscopicus subsp. jinggangensis TL01]
Length = 247
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 100/177 (56%), Gaps = 18/177 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TL +V E ++ R+ PYVPG LAFRE P + + LD + P +++ DG GL HP
Sbjct: 67 TLDVVAEATAVGRVSFPYVPGLLAFREIPTVRAALDRLP-----CPPGLVVCDGYGLAHP 121
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLASH+GVL +L T+GV KN D E PL+ G+
Sbjct: 122 RRFGLASHLGVLTDLPTVGVAKNPFTF----------AYDGPEPARGGWAPLLAGT-EEV 170
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQK 298
G A+R T D +KP+F+SVGH +SLD AV + +T +YR+PE R+AD R L++
Sbjct: 171 GRALR-TRDGVKPVFVSVGHRVSLDNAVAHTLALTPRYRLPETTRRADALCRRALRE 226
>gi|21225020|ref|NP_630799.1| endonuclease [Streptomyces coelicolor A3(2)]
gi|56404429|sp|Q9X7N2.1|NFI_STRCO RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|4584473|emb|CAB40676.1| putative endonuclease [Streptomyces coelicolor A3(2)]
Length = 233
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 123/241 (51%), Gaps = 36/241 (14%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QDEL+ R++ ++ P T T GVD+++ E + V
Sbjct: 22 VQDELRARVVLDE---PGPPPGTGRVT--------------GVDVAYDDER-DVVAAAAV 63
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VLD TL +V E ++ R+ PYVPG LAFRE P +L+ L+ + P +++ DG
Sbjct: 64 VLDAGTLAVVAEATAVGRISFPYVPGLLAFREIPTVLAALEALP-----CPPGLVVCDGY 118
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
GL HPR FGLASH+GVL L TIGV KN TH D + PL+ G
Sbjct: 119 GLAHPRRFGLASHLGVLTGLPTIGVAKNPFT---FTH-------DDPDTPRGSTSPLLAG 168
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYL 296
+ G A+R T D +KP+F+SVGH + L A + +T YR+PE R+AD R L
Sbjct: 169 A-EEVGRAVR-TRDGVKPVFVSVGHRVGLGNACAHTLALTPAYRLPETTRRADALCRAAL 226
Query: 297 Q 297
+
Sbjct: 227 R 227
>gi|225849417|ref|YP_002729581.1| endonuclease V (deoxyinosine 3'endonuclease)(deoxyribonuclease V)
(DNase V) [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643931|gb|ACN98981.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Sulfurihydrogenibium azorense Az-Fu1]
Length = 226
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 20/198 (10%)
Query: 94 LKYIGGVDMSF--SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
+K++ G+D +F ++P++A CIVVL+L+ +V + + PY+P FLAFRE P
Sbjct: 28 VKFVAGIDTTFLDPYKEPTLAISCIVVLNLEDFSVVETVFGQKEIDFPYIPTFLAFREIP 87
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
++ +K P V ++DG G+LHPR G+ASH GV+ + ++G GK+
Sbjct: 88 SIMEAYQKLKSS-----PDVFILDGQGILHPRKMGIASHFGVITDTVSVGCGKS------ 136
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV- 270
L + QL EN P+ G G A+R +T PIF+S G+ ISL++++
Sbjct: 137 LLYGKYTQL----ENKPMAYSPVY-ADGEVRGYALRVKKNT-NPIFVSPGNNISLNSSLY 190
Query: 271 MIVKMTCKYRVPEPIRQA 288
+I+K Y++PEP+R A
Sbjct: 191 VIIKSINGYKLPEPVRLA 208
>gi|427708906|ref|YP_007051283.1| Endonuclease V [Nostoc sp. PCC 7107]
gi|427361411|gb|AFY44133.1| Endonuclease V [Nostoc sp. PCC 7107]
Length = 242
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 110/197 (55%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ Y+ GVDM F+ D +I+ + VL LQ++ + PY+PGFL+FRE P +
Sbjct: 58 ISYVAGVDMGFTA-DGTISRAAVAVLSFPDLQVIETTLAHRPTSFPYIPGFLSFREIPAV 116
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L+ ++ P +++ DG G+ HPR FG+ASH+GV+ ++ TIGV K+L
Sbjct: 117 LDALEKIQT-----VPDIILCDGQGIAHPRRFGIASHLGVILDMPTIGVAKSL------- 164
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G + L + + +I G T G +R T +KP++IS GH ISL TA+ +
Sbjct: 165 FIGKHKELPETRGSWQPLI----HKGETIGAVLR-TRIGVKPLYISSGHKISLTTAIDYV 219
Query: 273 VKMTCKYRVPEPIRQAD 289
++ T K+R+PE R AD
Sbjct: 220 LRCTPKFRLPETTRVAD 236
>gi|407698051|ref|YP_006822839.1| endonuclease V [Alcanivorax dieselolei B5]
gi|407255389|gb|AFT72496.1| Endonuclease V [Alcanivorax dieselolei B5]
Length = 227
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 26/213 (12%)
Query: 81 TTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV-- 138
T E++ +++ + GVD+ F ED A +VVLD TL+ V D++L RL V
Sbjct: 22 TATAVITEDQLPVVRTVAGVDVGF--EDKHTARAAVVVLDAATLEPV--DHALARLPVSF 77
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PYVPG L+FRE PV++ L ++K P +L+ DG G+ HPR G+ASH+GVL L
Sbjct: 78 PYVPGLLSFRECPVVMRALASLK-----VTPDLLLCDGQGIAHPRRLGVASHLGVLTGLP 132
Query: 199 TIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
+IGV K+ + G TH D + +PL G+ G +R T +KP+FI
Sbjct: 133 SIGVAKS--RLLG-TH-------DPVSDRRGAWVPLRDGN-EVIGAVLR-TRQGVKPLFI 180
Query: 259 SVGHCISLDTAVMIVKMTC--KYRVPEPIRQAD 289
S GH +SL TA+ V M C +YR+PE R AD
Sbjct: 181 SPGHRLSLATALEWV-MACVTRYRLPETTRWAD 212
>gi|294634215|ref|ZP_06712761.1| deoxyribonuclease V [Edwardsiella tarda ATCC 23685]
gi|451967584|ref|ZP_21920822.1| endonuclease V [Edwardsiella tarda NBRC 105688]
gi|291092360|gb|EFE24921.1| deoxyribonuclease V [Edwardsiella tarda ATCC 23685]
gi|451313622|dbj|GAC66184.1| endonuclease V [Edwardsiella tarda NBRC 105688]
Length = 227
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 107/194 (55%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F +E ++ I VL +L +V + + ++PY+PGFL+FRE P LL
Sbjct: 29 IAGADVGFEQEG-AVTRAAIAVLHYPSLTLVEYQVARIATRMPYIPGFLSFREYPALLQA 87
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+++R PQ++MVDG+G+ HPR G+ASH G+LA++ TIGV K + G
Sbjct: 88 WAQLRQR-----PQLVMVDGHGIAHPRRLGIASHFGLLADVPTIGVAKRRLY-------G 135
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
LDA PLM G+ G +RS P+FIS GH +S D+A+ V+
Sbjct: 136 QFADLDAAPGAT---TPLMDGAEPI-GWVLRSK-ARCNPLFISSGHRVSRDSALAWVQRC 190
Query: 277 CK-YRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 191 LRGYRLPEPTRWAD 204
>gi|300122708|emb|CBK23274.2| unnamed protein product [Blastocystis hominis]
Length = 194
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 95/168 (56%), Gaps = 12/168 (7%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW E Q+ L +I E+ L + ++ L+ IGG+D+S+S +D A
Sbjct: 21 QWEEEQNRLAACVICEN---PELEDKIRNHS---------LERIGGLDISYSGDDDDTAV 68
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
GC+VV + QT +IVY D + VPY+PG+LA+RE P+ SLL +K+ N +P+V++
Sbjct: 69 GCLVVYNPQTQKIVYSDLQTFTISVPYIPGYLAYREMPIYRSLLTKLKQNHNELFPEVIL 128
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLL 221
VDG G LHPR G A +G+ TIGVGKN+ SG + ++
Sbjct: 129 VDGQGRLHPRHCGSACVVGLEFGCPTIGVGKNMFCGGSFVQSGKKPVV 176
>gi|284030699|ref|YP_003380630.1| deoxyribonuclease V [Kribbella flavida DSM 17836]
gi|283809992|gb|ADB31831.1| Deoxyribonuclease V [Kribbella flavida DSM 17836]
Length = 223
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 114/207 (55%), Gaps = 23/207 (11%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+Y+ G+D++++ ++ + A +VVLD L++V L R PYVPG AFRE P LL
Sbjct: 33 RYVAGLDVAYAGDEFAAA---VVVLD--GLEVVDRAVVLGRTAFPYVPGLFAFREVPGLL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ L+ ++ P++L+ DG GL HPR FGLA H+GV+ L ++GV K
Sbjct: 88 TALERLRT-----TPELLVCDGQGLAHPRRFGLACHLGVVTGLPSVGVAKT-------AF 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IV 273
G Q + + +++ G G A+R T + KP+F+SVGH + L TAV ++
Sbjct: 136 VGTWQEPGPRRGDASELLL----DGEVVGKALR-TQNKTKPVFVSVGHRVDLATAVARVL 190
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQKHQ 300
+T +YR+PE R AD R L+ Q
Sbjct: 191 DLTPRYRLPETTRAADRVCRQALKDSQ 217
>gi|195953868|ref|YP_002122158.1| Deoxyribonuclease V [Hydrogenobaculum sp. Y04AAS1]
gi|195933480|gb|ACG58180.1| Deoxyribonuclease V [Hydrogenobaculum sp. Y04AAS1]
Length = 209
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 109/196 (55%), Gaps = 32/196 (16%)
Query: 97 IGGVDMSFSK-EDPSIACGCIVVLDLQTLQI---VYEDYSLLRLQVPYVPGFLAFREAPV 152
IGG+D++F K +D +I G +V+LD +I +Y+DY + PY+PGFL++RE P+
Sbjct: 29 IGGIDLTFIKNKDKTIGIGALVILDKDKNKIYEHIYKDY----VDFPYIPGFLSYREFPI 84
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+ L++ K P + M+DGNG+LHPR GLASH GV + + GV K L D
Sbjct: 85 MEKLVNTSK-----VLPDIYMIDGNGMLHPRFCGLASHFGVKLDKISFGVAKKLLIGD-- 137
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+D + N + G A++ T +KPI++S+GH ISL++AV I
Sbjct: 138 --------IDKENNIIL--------NNIIVGKALK-TKKNVKPIYVSIGHKISLESAVNI 180
Query: 273 VKMTCKYRVPEPIRQA 288
KYR+PEP R A
Sbjct: 181 TLHFSKYRIPEPTRLA 196
>gi|294101329|ref|YP_003553187.1| Deoxyribonuclease V [Aminobacterium colombiense DSM 12261]
gi|293616309|gb|ADE56463.1| Deoxyribonuclease V [Aminobacterium colombiense DSM 12261]
Length = 229
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 23/205 (11%)
Query: 88 EEEEVLLKYIGGVDMSFSKE-DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
E+EE+LLK + GVD+++S+ + A IV ++ +T Q + +++ + PY+ G L+
Sbjct: 26 EDEEILLKIVAGVDVAYSRRGKEAWAIVGIVTMEWETFQPIEFVHAICPVSFPYLTGLLS 85
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
+RE PVL+ L+ ++ P + M DG G+ HPR GLASH GVL N TIGV K+
Sbjct: 86 YRELPVLIEALNKLQSA-----PDLWMFDGAGIAHPRKIGLASHFGVLTNSVTIGVAKS- 139
Query: 207 HHVDGLTHSGVRQLLDAKENNNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCI 264
R + + +E E + PL S GV +RS +KP+FIS GH I
Sbjct: 140 -----------RLVGEYEEPAIEKGSVSPLYFNSEQV-GVVLRSR-RAVKPLFISPGHRI 186
Query: 265 SLDTAVMIVKMTC-KYRVPEPIRQA 288
S++ A ++V C +YR+PEP R A
Sbjct: 187 SIEKAALLVLKACVRYRLPEPTRAA 211
>gi|383830222|ref|ZP_09985311.1| deoxyinosine 3'endonuclease (endonuclease V) [Saccharomonospora
xinjiangensis XJ-54]
gi|383462875|gb|EID54965.1| deoxyinosine 3'endonuclease (endonuclease V) [Saccharomonospora
xinjiangensis XJ-54]
Length = 246
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 116/217 (53%), Gaps = 13/217 (5%)
Query: 86 TKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFL 145
T ++ E ++ + GVD+++ ++ +A VVLD +L++V + + PY PG
Sbjct: 37 TVDDAEHAVRTVAGVDVAYERDGDRLAAAA-VVLDYASLEVVETSTVIATAEFPYEPGLF 95
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
AFRE P L+ L + P +++ DG+GL HPR FGLA H+G+LA++ T GV K
Sbjct: 96 AFRELPALVEALRELAT-----TPDLIVCDGHGLAHPRRFGLACHLGLLADVPTFGVAKT 150
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
+ + + + R +E G+G G +R T D +KP+F+SVGH IS
Sbjct: 151 VFVGEFVPPASRRGAWSPLTVGDEGW-----GNGENIGAVVR-TRDGVKPVFVSVGHRIS 204
Query: 266 LDTA-VMIVKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
LDTA + ++ R+PE R+AD SR+ L S
Sbjct: 205 LDTARAHTITLSRHARLPETTRRADHLSREVLAGRIS 241
>gi|428203083|ref|YP_007081672.1| deoxyinosine 3'endonuclease [Pleurocapsa sp. PCC 7327]
gi|427980515|gb|AFY78115.1| deoxyinosine 3'endonuclease (endonuclease V) [Pleurocapsa sp. PCC
7327]
Length = 221
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 44/249 (17%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
+PA + + EIQ +L+ +I E+ NL ++Y+ GVD+ F
Sbjct: 6 NPAWAQTIEEAIEIQKQLRHLVIVEN----NLGE---------------VRYVAGVDVGF 46
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
+++ ++ + VL LQ++ + + PY+PGFL+FRE P +L L+ +
Sbjct: 47 -EDNYTMTQAAVAVLSFPQLQLLESAIAQMPTTFPYIPGFLSFREIPAILKALEKL---- 101
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLL 221
+ P +++ DG G+ HPR FG+A H+GVL ++ TIGV K+L H + G Q L
Sbjct: 102 -NLVPDLILCDGQGIAHPRRFGIACHLGVLIDVPTIGVAKSLLVGKHEELSPEKGSWQPL 160
Query: 222 DAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYR 280
+ G GV +R T + P+++SVGH ISL TA+ +++ T KYR
Sbjct: 161 RDR--------------GDVVGVVLR-TRTNVNPVYVSVGHRISLSTAIDYVLRCTTKYR 205
Query: 281 VPEPIRQAD 289
+PE R AD
Sbjct: 206 LPETTRWAD 214
>gi|421503340|ref|ZP_15950289.1| endonuclease V [Pseudomonas mendocina DLHK]
gi|400345813|gb|EJO94174.1| endonuclease V [Pseudomonas mendocina DLHK]
Length = 237
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 112/201 (55%), Gaps = 26/201 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ + GVD+ F +E +I V+LD +TLQ + E + + +PYVPG L+FRE P L
Sbjct: 42 LRRLAGVDVGF-EEGGAITRAAAVLLDAETLQPLAECVARIPTSMPYVPGLLSFRELPAL 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVD 210
L L ++ + P ++ VDG+G+ HPRG G+A+H+GV++ TIGV K + HH +
Sbjct: 101 LRALADLPQE-----PDLVFVDGHGIAHPRGLGIAAHLGVVSGFATIGVAKKILTGHHAE 155
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G R + L+ G G +RS D ++P+ +S G+ +SL+ A
Sbjct: 156 LAETRGAR-------------VELLSRRGEQIGWVLRSK-DRVRPLIVSPGNRVSLERAS 201
Query: 271 MIVKMTC--KYRVPEPIRQAD 289
+V M C ++R+PEP R AD
Sbjct: 202 ELV-MACVRRHRLPEPTRLAD 221
>gi|290955886|ref|YP_003487068.1| endonuclease [Streptomyces scabiei 87.22]
gi|260645412|emb|CBG68498.1| putative endonuclease [Streptomyces scabiei 87.22]
Length = 236
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/250 (35%), Positives = 126/250 (50%), Gaps = 36/250 (14%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDP 109
A Q +QDEL+ R++ ++ T P + Y+ GVD+++ E
Sbjct: 19 ATAEQALAVQDELRGRVVLDE--TGPPPGT---------------GYVTGVDVAYDDER- 60
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
+ VVLD TL +V E + R+ PYVPG LAFRE P +L+ LD + P
Sbjct: 61 DVVAAAAVVLDAATLAVVAEATATGRVSFPYVPGLLAFREIPTVLAALDALP-----CDP 115
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+++ DG G HPR FGLA+H+GVL L TIGV KN TH +
Sbjct: 116 GLVVCDGYGRAHPRRFGLAAHLGVLTGLPTIGVAKNPFT---FTH-------EEPGTPRG 165
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQA 288
PL+ G+ G A+R T D +KP+F+SVGH + LD A + +T YR+PE R+A
Sbjct: 166 SAAPLLAGT-EEVGRALR-TRDGVKPVFVSVGHRVGLDNACAHTLALTPAYRLPETTRRA 223
Query: 289 DIRSRDYLQK 298
D R L++
Sbjct: 224 DSLCRRALRE 233
>gi|449090204|ref|YP_007422645.1| Endonuclease V [Bacillus thuringiensis serovar kurstaki str. HD73]
gi|449023961|gb|AGE79124.1| Endonuclease V [Bacillus thuringiensis serovar kurstaki str. HD73]
Length = 235
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 21/220 (9%)
Query: 76 LPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKED-PSIACGCIVVLDLQTLQIVYEDYSLL 134
LP NT EE ++++ GVD+++ + + + CIVV+D T ++V + YS
Sbjct: 21 LPKVQLRNTFELEE----IRFVAGVDLAYWELNGKTYGTCCIVVIDFSTHEVVEKVYSYG 76
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
+ +PY+ GFLAFRE P++ + + K+ P + M DGNG LH R G+A+H
Sbjct: 77 EITIPYISGFLAFRELPLIKAAAKKLTKQ-----PDIYMFDGNGYLHYRHMGIATHASFY 131
Query: 195 ANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLK 254
N TIGV K+ + G+ + + + +E + DII + +G A+R+T ++K
Sbjct: 132 LNKPTIGVAKSYLKIKGVDFT----MPENQEGSYTDIII----NNEIYGRALRTT-KSVK 182
Query: 255 PIFISVGHCISLDTAVMIVK--MTCKYRVPEPIRQADIRS 292
PIFIS G+ I L+T+ IV + + R+P P+R AD+ +
Sbjct: 183 PIFISCGNWIDLETSTEIVMRLINKESRLPIPVRLADLET 222
>gi|228953569|ref|ZP_04115611.1| Endonuclease V [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|423425351|ref|ZP_17402382.1| endonuclease V [Bacillus cereus BAG3X2-2]
gi|423504049|ref|ZP_17480641.1| endonuclease V [Bacillus cereus HD73]
gi|228806091|gb|EEM52668.1| Endonuclease V [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|401112566|gb|EJQ20444.1| endonuclease V [Bacillus cereus BAG3X2-2]
gi|402457740|gb|EJV89497.1| endonuclease V [Bacillus cereus HD73]
Length = 244
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 122/220 (55%), Gaps = 21/220 (9%)
Query: 76 LPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKED-PSIACGCIVVLDLQTLQIVYEDYSLL 134
LP NT EE ++++ GVD+++ + + + CIVV+D T ++V + YS
Sbjct: 30 LPKVQLRNTFELEE----IRFVAGVDLAYWELNGKTYGTCCIVVIDFSTHEVVEKVYSYG 85
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
+ +PY+ GFLAFRE P++ + + K+ P + M DGNG LH R G+A+H
Sbjct: 86 EITIPYISGFLAFRELPLIKAAAKKLTKQ-----PDIYMFDGNGYLHYRHMGIATHASFY 140
Query: 195 ANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLK 254
N TIGV K+ + G+ + + + +E + DII + +G A+R+T ++K
Sbjct: 141 LNKPTIGVAKSYLKIKGVDFT----MPENQEGSYTDIII----NNEIYGRALRTT-KSVK 191
Query: 255 PIFISVGHCISLDTAVMIVK--MTCKYRVPEPIRQADIRS 292
PIFIS G+ I L+T+ IV + + R+P P+R AD+ +
Sbjct: 192 PIFISCGNWIDLETSTEIVMRLINKESRLPIPVRLADLET 231
>gi|304399312|ref|ZP_07381177.1| Deoxyribonuclease V [Pantoea sp. aB]
gi|440758039|ref|ZP_20937217.1| Endonuclease V [Pantoea agglomerans 299R]
gi|304353168|gb|EFM17550.1| Deoxyribonuclease V [Pantoea sp. aB]
gi|436428233|gb|ELP25892.1| Endonuclease V [Pantoea agglomerans 299R]
Length = 222
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 116/216 (53%), Gaps = 26/216 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F +E ++ +V+L+ +L +V + + +PY+PGFL+FRE P L+
Sbjct: 29 RFIGGADVGFEQEG-TVTRAAMVILEYPSLTLVEHRIARVETTMPYIPGFLSFREYPALM 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 88 AAWQMLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKS-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G LDA+ + + +I G W +R P+F++ GH +SL+TA+ V+
Sbjct: 136 CGRFDDLDAQPGSRQPLIDKGEQIGWVWRSKLRC-----NPLFVATGHRVSLNTALQWVE 190
Query: 275 -MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
T YR+PEP R AD + + QRWQ
Sbjct: 191 NCTRGYRLPEPTRWADAVA-------SNRTAFQRWQ 219
>gi|428212740|ref|YP_007085884.1| deoxyinosine 3'endonuclease [Oscillatoria acuminata PCC 6304]
gi|428001121|gb|AFY81964.1| deoxyinosine 3'endonuclease (endonuclease V) [Oscillatoria
acuminata PCC 6304]
Length = 219
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 38/239 (15%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
+ + T IQ+EL+ ++I +D +LP ++Y+ GVD + +++
Sbjct: 13 VEEATAIQEELRGQVIVKD----DLPQ---------------VRYVAGVDAGYQEQE-QQ 52
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
+VVL LQ+ + + Q PY+PGFL+FRE P +L L+ + P +
Sbjct: 53 TQAAVVVLSFPDLQLCDQAIARCPTQFPYIPGFLSFREVPAVLEALEQLT-----ILPDL 107
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
L+ DG GL HPR FG+A H+GVL NL IGV K+ G ++L + + + +
Sbjct: 108 LLCDGQGLAHPRRFGIACHLGVLTNLPAIGVAKS-------RFIGTHEVLPPERGSWQPL 160
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+ G T G +RS + P++IS+GH ISL TA+ +++ T +YR+PE R +D
Sbjct: 161 L----DQGETVGAVLRSR-SHVNPLYISIGHRISLPTALDYVLRCTPQYRLPETTRMSD 214
>gi|148656875|ref|YP_001277080.1| deoxyribonuclease V [Roseiflexus sp. RS-1]
gi|254767279|sp|A5UWX7.1|NFI_ROSS1 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|148568985|gb|ABQ91130.1| Endonuclease V [Roseiflexus sp. RS-1]
Length = 222
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 126/247 (51%), Gaps = 54/247 (21%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
L + IQ ++ R+IT D ++ + GVD +S +
Sbjct: 12 SLAEARAIQQHIRTRIITHD-------------------AHGPIRTVAGVDTGYSGDS-- 50
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAPVLLSLLDNMKKRANHFY 168
A +VVL +L+++ DY++ R Q+ PYVPG+L+FREAP +L L +++
Sbjct: 51 -ALAAVVVLAFPSLEVL--DYAVARRQIDFPYVPGYLSFREAPAVLDALASLR-----IA 102
Query: 169 PQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNN 228
P +L+ DG+GL HPR G+ASH+GVL +L +IG K+ LL
Sbjct: 103 PDLLICDGHGLAHPRRCGIASHLGVLTDLPSIGCAKS--------------LLVGTHEPP 148
Query: 229 EDI----IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVP 282
D+ PL G G A+R+ P ++P+++S+GH ++L+TA+ V M C +YR+P
Sbjct: 149 PDVRGAWTPLH-DQGEVVGAALRTRPG-VRPVYVSIGHRVALETAIRFV-MACVTRYRLP 205
Query: 283 EPIRQAD 289
E R AD
Sbjct: 206 ETTRAAD 212
>gi|397685806|ref|YP_006523125.1| endonuclease V [Pseudomonas stutzeri DSM 10701]
gi|395807362|gb|AFN76767.1| endonuclease V [Pseudomonas stutzeri DSM 10701]
Length = 235
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 110/200 (55%), Gaps = 24/200 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F +E +I +V+LD +L+ + + + + +PY+PG L+FRE P +
Sbjct: 42 LRLIAGVDVGF-EEGGAITRAAMVLLDALSLEPIAQTLARIPTSMPYIPGLLSFRELPAV 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVD 210
L L+ + P ++ DG+G+ HPRG G+A+H+GV+ L TIGV K + HH
Sbjct: 101 LQALEALP-----HVPDLIFSDGHGIAHPRGLGIAAHLGVVTGLPTIGVAKKVLTGHH-- 153
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
+ D + L+ G G +RS D ++P+ IS G+ +SLDTA
Sbjct: 154 -----------EPLGEQRGDRVELLDRGGRVIGTVLRSK-DKVRPLIISPGNRVSLDTAP 201
Query: 271 -MIVKMTCKYRVPEPIRQAD 289
++++ +YR+PEP R AD
Sbjct: 202 RLVMQYVTRYRLPEPTRLAD 221
>gi|298243489|ref|ZP_06967296.1| Deoxyribonuclease V [Ktedonobacter racemifer DSM 44963]
gi|297556543|gb|EFH90407.1| Deoxyribonuclease V [Ktedonobacter racemifer DSM 44963]
Length = 235
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 121/231 (52%), Gaps = 28/231 (12%)
Query: 74 WNLPNSTTTNTSTKEEEEVLL-------KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI 126
WNL + + + ++L +YI GVDM+ +E ++A +V+L L+I
Sbjct: 7 WNLSSEAAIALQHELAQHIILEDQVGEVRYIAGVDMAIHEEH-NMAQAAVVLLSFPDLEI 65
Query: 127 VYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFG 186
V +Q+PYVPG L+FREAP +L + ++++ P ++MVDG G+ HPR G
Sbjct: 66 VERHIYEEPIQMPYVPGLLSFREAPSVLGAIRKLRQK-----PDLVMVDGQGIAHPRRIG 120
Query: 187 LASHIGVLANLTTIGVGKNL--HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGV 244
+ +H+G+ N+ TIG K+L H D ++ LD + + +I G
Sbjct: 121 IGAHLGLWLNIPTIGCAKSLLVGHYD-------KEALDEEAGSWVPLIYKKEVIG----- 168
Query: 245 AMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQADIRSRD 294
AM T + P+ IS GH ISL+T++ V K YR+PEP R AD S+D
Sbjct: 169 AMVRTRTRVNPMIISPGHLISLETSIRYVLACSKGYRLPEPTRLADKLSKD 219
>gi|383776034|ref|YP_005460600.1| putative endonuclease V [Actinoplanes missouriensis 431]
gi|381369266|dbj|BAL86084.1| putative endonuclease V [Actinoplanes missouriensis 431]
Length = 232
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 108/203 (53%), Gaps = 21/203 (10%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D+++ + A +VVLD L + L R PYVPG AFRE P LL
Sbjct: 34 VAGLDVAYDGDRLGAA---VVVLDYADLSVRDTAVVLGRPAFPYVPGLFAFREVPALLEA 90
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L+ + R P VL+ DG+G+ HPR FGLA+H+GVL +L GVGK
Sbjct: 91 LEKLTVR-----PDVLICDGHGVAHPRRFGLAAHLGVLTDLPAFGVGKTRL--------- 136
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKM 275
V + E D PL+ +G T G +R T +KP+F+S GH + LD+A M +++
Sbjct: 137 VGEFAPVGEERG-DRSPLI-DAGETVGAVLR-TRARVKPVFVSAGHRMDLDSACRMTLRL 193
Query: 276 TCKYRVPEPIRQADIRSRDYLQK 298
T +YR+PE R AD RD L +
Sbjct: 194 TPEYRLPETTRAADRACRDLLLR 216
>gi|432328498|ref|YP_007246642.1| O-6-methylguanine DNA methyltransferase [Aciduliprofundum sp.
MAR08-339]
gi|432135207|gb|AGB04476.1| O-6-methylguanine DNA methyltransferase [Aciduliprofundum sp.
MAR08-339]
Length = 305
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/249 (33%), Positives = 128/249 (51%), Gaps = 51/249 (20%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + E Q L+++++ ED F +L +GGVD+S+S
Sbjct: 108 LKKLREEQKALREKIVIEDDFHCDL--------------------VGGVDVSYSGR---Y 144
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
A G +V+++ + +IV + PY+P +LAFRE P++ SL+ K+ N+F +
Sbjct: 145 AYGALVIMN-ENFEIVELVKDKFIVNFPYIPTYLAFREGPIISSLV---KRSRNNF---I 197
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
LMVDGNG+LHP G GLASH+GV NL T+GV KNL LL E N I
Sbjct: 198 LMVDGNGILHPLGIGLASHVGVSNNLPTMGVAKNL-------------LLGKVEGGNILI 244
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
G G ++S + I+IS GH +SL ++ IVK KY+ PEP+R A +
Sbjct: 245 ------DGRIVGKYLKS--GIKRGIYISPGHRVSLKSSEFIVKKFLKYKNPEPLRIAHMM 296
Query: 292 SRDYLQKHQ 300
+ ++ + ++
Sbjct: 297 ANEFRRDNK 305
>gi|395212961|ref|ZP_10400039.1| endonuclease V [Pontibacter sp. BAB1700]
gi|394456928|gb|EJF11146.1| endonuclease V [Pontibacter sp. BAB1700]
Length = 227
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 132/252 (52%), Gaps = 50/252 (19%)
Query: 43 SPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDM 102
+PDPA A+L TE Q E++KR+I + + + LK I G D
Sbjct: 11 APDPALLARL---TEQQREMQKRIIIQ-------------------KPDFDLKLIAGCDS 48
Query: 103 SFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKK 162
SF ED ++ V+L L+++ + + +++PYVPGFL+FREAP LL + +++
Sbjct: 49 SFVGEDHILSV--FVLLSYPELEVLEKVWHYGEVELPYVPGFLSFREAPNLLKAYEKLQQ 106
Query: 163 RANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQ 219
+ P ++MVDG+G+ HPR G+A+H+G+ N T+GV K + + + T G
Sbjct: 107 K-----PDLIMVDGHGISHPRRLGIATHLGLQLNKPTMGVAKKVLVGKYKEPDTLKGSVS 161
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC-- 277
L+ K G G +R T D +KP+F+S GH + L +A I +TC
Sbjct: 162 PLEHK--------------GELVGNVLR-TKDNVKPVFVSPGHLMDLPSATEIA-LTCAT 205
Query: 278 KYRVPEPIRQAD 289
KY++PEP R AD
Sbjct: 206 KYKLPEPTRLAD 217
>gi|156742353|ref|YP_001432482.1| deoxyribonuclease V [Roseiflexus castenholzii DSM 13941]
gi|254767278|sp|A7NSC5.1|NFI_ROSCS RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|156233681|gb|ABU58464.1| Deoxyribonuclease V [Roseiflexus castenholzii DSM 13941]
Length = 222
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 127/242 (52%), Gaps = 46/242 (19%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + IQ+ ++ ++IT D F ++ + GVD +S +
Sbjct: 13 LGEARVIQERIRAQVITCDAFG-------------------PIRTVAGVDAGYSGDS--- 50
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
A +VVL +LQ + DY++ R Q+ PYVPG+L+FREAP +L L +++ P
Sbjct: 51 ALAAVVVLAFPSLQAL--DYAVARRQISFPYVPGYLSFREAPAVLDALASLR-----ITP 103
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+LM DG+GL HPR G+A H+GVL +L +IG K++ VR +++E
Sbjct: 104 DLLMCDGHGLAHPRRCGIACHLGVLTDLPSIGCAKSVLVGAHDPLPDVRGAWTPLRHDDE 163
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQ 287
+ G A+R+ P ++P+++SVGH +SL+TA+ V M C +YR+PE R
Sbjct: 164 IV-----------GAALRTRPG-VRPVYVSVGHRVSLETAIQFV-MACVTRYRLPETTRA 210
Query: 288 AD 289
AD
Sbjct: 211 AD 212
>gi|54026550|ref|YP_120792.1| endonuclease V [Nocardia farcinica IFM 10152]
gi|62286976|sp|Q5YQW3.1|NFI_NOCFA RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|54018058|dbj|BAD59428.1| putative endonuclease V [Nocardia farcinica IFM 10152]
Length = 226
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 119/241 (49%), Gaps = 38/241 (15%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QD+L+ R++ + + + GVD ++ +A +V
Sbjct: 18 VQDDLRARVVAAN------------------PRPPVFATVAGVDSAYDDAAGLVAT-AVV 58
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VLD TL+ + + ++ PYVPG LAFRE P LS L+ ++ P +L+ D
Sbjct: 59 VLDTATLEPIESAVAHGPVRFPYVPGLLAFRELPTTLSALEQLRT-----TPDLLVCDAQ 113
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
GL HPR FGLA H+GV L TIGV KN T G R + + E ++
Sbjct: 114 GLAHPRRFGLACHVGVRTGLPTIGVAKNAW--GAWTEPGRR-----RGDAAELVL----- 161
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSRDYL 296
G G+A+R T D +KP+F+SVGH I L TA ++ +T +YR PE RQAD R L
Sbjct: 162 DGEVVGLALR-TRDDVKPVFVSVGHHIDLPTAREQVLALTPRYRQPETTRQADRLCRAAL 220
Query: 297 Q 297
+
Sbjct: 221 R 221
>gi|302541377|ref|ZP_07293719.1| deoxyribonuclease V [Streptomyces hygroscopicus ATCC 53653]
gi|302458995|gb|EFL22088.1| deoxyribonuclease V [Streptomyces himastatinicus ATCC 53653]
Length = 243
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/182 (41%), Positives = 97/182 (53%), Gaps = 21/182 (11%)
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
LD +TL +V E ++ R+ PYVPG LAFRE P +L L + + + P V++ DG G
Sbjct: 71 LDARTLAVVGETTAVGRITFPYVPGLLAFREIPAVLDALGALDRLGHR--PDVVVCDGYG 128
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKN---LHHVDGLTHSGVRQLLDAKENNNEDIIPLM 235
L HPR FGLASH+GVL L TIGV KN H D D PL+
Sbjct: 129 LAHPRRFGLASHLGVLTGLPTIGVAKNPFTFRH-------------DPPGPRRGDWTPLL 175
Query: 236 GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA-VMIVKMTCKYRVPEPIRQADIRSRD 294
G G A+R T D +KP+F+SVGH ++LD A + + YR PE R+AD R
Sbjct: 176 DGDEEV-GRALR-TRDGVKPVFVSVGHRVTLDDACAYTLHLARDYRQPETTRRADALCRR 233
Query: 295 YL 296
L
Sbjct: 234 AL 235
>gi|428226720|ref|YP_007110817.1| Endonuclease V [Geitlerinema sp. PCC 7407]
gi|427986621|gb|AFY67765.1| Endonuclease V [Geitlerinema sp. PCC 7407]
Length = 222
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 110/196 (56%), Gaps = 19/196 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ GVD+ F +E+ + I VL L++V + PYVPGFL+FRE P +
Sbjct: 37 IRYVAGVDVGF-EENGATTRAAIAVLQFPELRLVETAIARRPTSFPYVPGFLSFREIPAV 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L+ +++ +P +L+ DG G HPR G+A H+GVL +L IGVGK+ + G T
Sbjct: 96 LDALEQVRQ-----WPDLLLCDGQGQAHPRRLGIACHLGVLTDLPAIGVGKS--RLVG-T 147
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
H V + +PL+ G G +RS T KP++ISVGH ISL TA+ +
Sbjct: 148 HPEV-------PDERGAWVPLV-DRGEVIGAVLRSRAKT-KPLYISVGHRISLPTALEYV 198
Query: 273 VKMTCKYRVPEPIRQA 288
+ T KYR+PE RQA
Sbjct: 199 MACTPKYRLPETTRQA 214
>gi|297569562|ref|YP_003690906.1| Deoxyribonuclease V [Desulfurivibrio alkaliphilus AHT2]
gi|296925477|gb|ADH86287.1| Deoxyribonuclease V [Desulfurivibrio alkaliphilus AHT2]
Length = 237
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 21/205 (10%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLR-LQVPYVPGFL 145
+E+ L+ + GVD +F + P AC VVL V E ++ R L PYVPG L
Sbjct: 30 QEQPAGELRLVAGVDAAFVTDPP--ACLAGVVLWDSASGTVLESHTARRPLLFPYVPGLL 87
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+FREAP +++ L +++ P L+VDG GL HPR FG+A H+G+L L ++G K+
Sbjct: 88 SFREAPAIIAALRRLRR-----TPDALLVDGQGLAHPRRFGIACHLGLLTGLPSVGCAKS 142
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
G Q+ K + L+ T G +R T D ++P+FIS+GH I
Sbjct: 143 -------RLIGSFQMPGEKRGDYS----LLVDRQDTIGAVLR-TRDHVRPLFISIGHAID 190
Query: 266 LDTAV-MIVKMTCKYRVPEPIRQAD 289
LD A+ + + C YR+PEP R AD
Sbjct: 191 LDHAIELTLACGCGYRLPEPTRLAD 215
>gi|290476986|ref|YP_003469897.1| endonuclease V [Xenorhabdus bovienii SS-2004]
gi|289176330|emb|CBJ83135.1| endonuclease V (deoxyinosine 3'endoduclease) [Xenorhabdus bovienii
SS-2004]
Length = 235
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 118/236 (50%), Gaps = 33/236 (13%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
Q E +++I D F TT+ ++ + + I G D+ F K ++ I V
Sbjct: 11 QIEKARQVIRHDSFM------TTSTSAMPASTPFMPELIAGADVGFEKNG-TVTRAAIAV 63
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
L +L+++ + + +PY+PG L+FRE P L++ + R P ++MVDG G
Sbjct: 64 LHYPSLELLEYQVARIDTVLPYIPGLLSFREYPALMAAWQKLSLR-----PDLVMVDGQG 118
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKNL----HHVDGLTHSGVRQLLDAKENNNEDIIPL 234
+ HPR FG+ASH G+LA++ TIGV K+ H G + L+D E
Sbjct: 119 IAHPRRFGVASHFGLLADIPTIGVAKSRLCGEHPPVGDAVGSYQSLMDHAEQI------- 171
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
GV RS P++IS+GH +SLD+AV V+ K YR+PEP R AD
Sbjct: 172 --------GVVWRSK-KRCNPLYISIGHKVSLDSAVFWVEQCMKGYRLPEPTRWAD 218
>gi|443288988|ref|ZP_21028082.1| Endonuclease V [Micromonospora lupini str. Lupac 08]
gi|385887996|emb|CCH16156.1| Endonuclease V [Micromonospora lupini str. Lupac 08]
Length = 260
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 121/238 (50%), Gaps = 29/238 (12%)
Query: 76 LPNSTTTNTSTKEEEEVLLKYIG----------GVDMSFSKEDPSIACGCIVVLDLQTLQ 125
+P S + +EE L+ +G G+D++++ E + + VLD +TL
Sbjct: 26 VPRSVAEAVAVQEELRPLVDLVGPGPTAPATVAGLDVAYA-ESGDLLAAAVTVLDARTLA 84
Query: 126 IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGF 185
+V S+ R YVPG AFRE P LL+ LD + P +L+ DG+GL HPR F
Sbjct: 85 VVDSAVSVGRPAFGYVPGLFAFRELPALLAALDTLTT-----IPDLLVCDGHGLAHPRRF 139
Query: 186 GLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVA 245
GLA H+GV+ L TIGVGK V V + + + ++++ G
Sbjct: 140 GLACHLGVVTGLPTIGVGKT-PLVGAWAPPPVDRGAWSALRDGDEVV----------GRV 188
Query: 246 MRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQKHQST 302
+R T +KP+F+SVGH +SL+ A ++ +T +YR+PE R AD RD L + +
Sbjct: 189 LR-TQAGVKPVFVSVGHRMSLENATAQVLALTPRYRLPETTRTADRLCRDALTRAAPS 245
>gi|392955356|ref|ZP_10320894.1| deoxyribonuclease V [Bacillus macauensis ZFHKF-1]
gi|391878622|gb|EIT87204.1| deoxyribonuclease V [Bacillus macauensis ZFHKF-1]
Length = 232
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 121/227 (53%), Gaps = 23/227 (10%)
Query: 76 LPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS-IACGCIVVLDLQTLQIVYEDYSLL 134
LP N EE ++YI GVD+++ D + CIV++D T +V + YS
Sbjct: 21 LPQINLENKFQVEE----IRYIAGVDLAYWDVDEAKYGTCCIVIIDYFTKDVVEKVYSYG 76
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
+ VPY+PGFLAFRE P+++ ++ + + P + + DGNG LH R G+A+H L
Sbjct: 77 EILVPYIPGFLAFRELPLVIEAVEKLTLQ-----PDLYIFDGNGYLHDRHMGIATHASFL 131
Query: 195 ANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLK 254
N TIGV K+ + + + + KE DI+ + +G +R+T + +K
Sbjct: 132 LNKPTIGVAKSYLKIQDVDF----MMPENKEGAYTDIVI----NNEVYGRTLRTTQN-VK 182
Query: 255 PIFISVGHCISLDTAVMIVKMTC---KYRVPEPIRQADIRSRDYLQK 298
PIF+S G+ I LDT+ IV M C + R+P P+R AD+ + +K
Sbjct: 183 PIFVSCGNWIDLDTSTEIV-MNCINNESRLPIPVRLADLETHKIRKK 228
>gi|433603551|ref|YP_007035920.1| Endonuclease V [Saccharothrix espanaensis DSM 44229]
gi|407881404|emb|CCH29047.1| Endonuclease V [Saccharothrix espanaensis DSM 44229]
Length = 210
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 109/204 (53%), Gaps = 20/204 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ G+D+S++ +D G +VVLD++TL V L PY+PG AFRE P L
Sbjct: 27 VRYVAGLDVSYADDD--RLAGAVVVLDVETLYTVDTAVVLGTADFPYLPGLFAFRELPPL 84
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ L+ + P +L+ DG GL HPR FGLA H+GV+ +L ++GV K T
Sbjct: 85 VRALEKLS-----VTPDLLVCDGQGLAHPRRFGLACHLGVVTDLPSVGVAK--------T 131
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G + + + D++ G G A+R T + +KP+F+SVGH I LD A V
Sbjct: 132 PMGRFEQPSEERGSVTDLVE----DGEVVGRALR-TREGVKPVFVSVGHKIDLDRACAEV 186
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQ 297
C R+PE R++D R L+
Sbjct: 187 LRLCVVRLPETTRRSDALGRAQLR 210
>gi|452944655|ref|YP_007500820.1| Endonuclease V [Hydrogenobaculum sp. HO]
gi|452883073|gb|AGG15777.1| Endonuclease V [Hydrogenobaculum sp. HO]
Length = 209
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 108/196 (55%), Gaps = 32/196 (16%)
Query: 97 IGGVDMSFSK-EDPSIACGCIVVLDLQTLQI---VYEDYSLLRLQVPYVPGFLAFREAPV 152
IGG+D++F K +D +I G +V+LD +I Y+DY + PY+PGFL++RE P+
Sbjct: 29 IGGIDLTFIKNKDKTIGIGALVILDKDKNKIYEHTYKDY----VDFPYIPGFLSYREFPI 84
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+ L++ K P + M+DGNG+LHPR GLASH GV + + GV K L D
Sbjct: 85 MEKLVNTSK-----VLPDIYMIDGNGMLHPRFCGLASHFGVNLDKISFGVAKKLLIGD-- 137
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+D + N + G A++ T +KPI++S+GH ISL++AV I
Sbjct: 138 --------IDKENNIIL--------NNIIVGKALK-TKKNVKPIYVSIGHKISLESAVNI 180
Query: 273 VKMTCKYRVPEPIRQA 288
KYR+PEP R A
Sbjct: 181 TLHFSKYRIPEPTRLA 196
>gi|451820616|ref|YP_007456817.1| endonuclease V [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
gi|451786595|gb|AGF57563.1| endonuclease V [Clostridium saccharoperbutylacetonicum N1-4(HMT)]
Length = 230
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 123/238 (51%), Gaps = 33/238 (13%)
Query: 57 EIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCI 116
EIQ LK +++ ++ F E E++ YI GVD+++ K+ A CI
Sbjct: 16 EIQANLKTKIVKDNTF---------------ELEDI--HYIAGVDLAYWKDAVEKAVCCI 58
Query: 117 VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDG 176
V+LD T +IV E + + PY+ G+LAFRE P+++ + + + P + + DG
Sbjct: 59 VILDYATGEIVEEVNCVGEINFPYISGYLAFRELPLVMKCNEKLSVK-----PDLYVFDG 113
Query: 177 NGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMG 236
NG LHPR G+A+H N TIGV KN + ++ + + + ++ DI+
Sbjct: 114 NGYLHPRHMGIATHASFYLNKPTIGVAKNYYKIEDVDFV----MPENEQGAFTDIVI--- 166
Query: 237 GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKY--RVPEPIRQADIRS 292
G +G A+R+ D +KPIFIS+G+ I L+T I+ + +P P R ADI +
Sbjct: 167 -DGEVYGRALRTCKD-VKPIFISIGNYIDLETTTSIINKLVRKDSHIPIPTRYADIAT 222
>gi|443622527|ref|ZP_21107049.1| putative endonuclease V [Streptomyces viridochromogenes Tue57]
gi|443343836|gb|ELS57956.1| putative endonuclease V [Streptomyces viridochromogenes Tue57]
Length = 248
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 111/204 (54%), Gaps = 19/204 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
++ GVD+++ E + VVLD TL+ V E ++ R+ PYVPG LAFRE P +L+
Sbjct: 44 HVTGVDVAYDDER-DVVAAAAVVLDAATLEAVAEATAVGRISFPYVPGLLAFREIPTVLA 102
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
LD + P +++ DG G HPR FGLASH+GVL L TIGV KN
Sbjct: 103 ALDALP-----CPPGLVVCDGYGRAHPRRFGLASHLGVLTGLPTIGVAKNPFTF------ 151
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVK 274
D + PL G G A+R T D++KP+F+SVGH +SLD A ++
Sbjct: 152 ----TYDDPDAPRGSCTPLTAGD-EVVGRALR-TRDSVKPVFVSVGHRVSLDNACAHVLA 205
Query: 275 MTCKYRVPEPIRQADIRSRDYLQK 298
+T YR+PE R+AD R L++
Sbjct: 206 LTPAYRLPETTRRADSLCRRALRE 229
>gi|291615776|ref|YP_003518518.1| Nfi [Pantoea ananatis LMG 20103]
gi|291150806|gb|ADD75390.1| Nfi [Pantoea ananatis LMG 20103]
Length = 222
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 113/200 (56%), Gaps = 27/200 (13%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F +E ++ +V+L+ ++++V + + +PY+PGFL+FRE P LL
Sbjct: 29 RFIGGADVGFEQEG-AVTRAALVILEYPSMKLVEYRIARIDTTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGL 212
+ + ++++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K HV+ L
Sbjct: 88 AAWNMLEQK-----PDLLFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKKRLCGHVETL 142
Query: 213 THS-GVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
+ G RQ L+D E G W R P+F++ GH +SLD+A+
Sbjct: 143 DETPGSRQPLMDKGEQ-----------IGWVWRSKARCN-----PLFVATGHRVSLDSAL 186
Query: 271 MIV-KMTCKYRVPEPIRQAD 289
V K T YR+PEP R AD
Sbjct: 187 EWVEKCTQGYRLPEPTRWAD 206
>gi|47204358|emb|CAF96052.1| unnamed protein product [Tetraodon nigroviridis]
gi|47204363|emb|CAF96031.1| unnamed protein product [Tetraodon nigroviridis]
Length = 183
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 92/181 (50%), Gaps = 35/181 (19%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
QD L++RL+ ED W + + L+ + GVD+S+ K D AC +VV
Sbjct: 2 QDRLRQRLLEEDTEAWQRDRNFSG-----------LERVAGVDLSYIKGDHVNACAQLVV 50
Query: 119 LDLQTL-----------------------QIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
L L Q+VYED ++ L PY+ GFLAFRE+ LL
Sbjct: 51 LSYPQLEVRTPEPRPPSPAGCVAMETVLVQVVYEDSQMVALTAPYLAGFLAFRESSALLE 110
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
L ++ H PQV+ VDGNGLLH R FGLA H+GVL+ L +GV KNL V G+ H
Sbjct: 111 RLQRLEHNQPHLLPQVVFVDGNGLLHHREFGLACHLGVLSGLPCVGVAKNLLQVQGV-HK 169
Query: 216 G 216
G
Sbjct: 170 G 170
>gi|163784266|ref|ZP_02179184.1| hypothetical protein HG1285_04638 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880468|gb|EDP74054.1| hypothetical protein HG1285_04638 [Hydrogenivirga sp. 128-5-R1-1]
Length = 229
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 118/211 (55%), Gaps = 25/211 (11%)
Query: 94 LKYIGGVDMSFSK--EDPSIACGCIVVLDLQ-TLQIVYEDYSLLRLQVPYVPGFLAFREA 150
+K + G+D +F+ E+P+ A CIVVLD++ + V ++ + PY+P FLA+RE
Sbjct: 33 IKLVAGIDTTFTNIWENPTTAISCIVVLDIEDNFKEVEVFFAEKIIDFPYIPTFLAYREL 92
Query: 151 PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
PV+L +K + P +VDG G++HPR G+A+H GV+ N ++GVGK
Sbjct: 93 PVILEAYKKLKIK-----PDAFLVDGMGIIHPRKMGIAAHFGVITNQISVGVGK------ 141
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
S + + EN P+ G G +R T + P+F+S G+ IS+++++
Sbjct: 142 ----SKLVGEFEMPENKKFSYKPVY-VDGELRGYVVR-TKENANPVFVSPGNNISVESSL 195
Query: 271 -MIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
+++K +Y++PEP R R+ +YLQK++
Sbjct: 196 KLVLKCVDRYKLPEPTR----RAHNYLQKYR 222
>gi|229151470|ref|ZP_04279673.1| Endonuclease V [Bacillus cereus m1550]
gi|228632013|gb|EEK88639.1| Endonuclease V [Bacillus cereus m1550]
Length = 238
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 121/220 (55%), Gaps = 21/220 (9%)
Query: 76 LPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKED-PSIACGCIVVLDLQTLQIVYEDYSLL 134
LP NT EE ++++ GVD+ + + + + CIVV+D T ++V + YS
Sbjct: 24 LPKVQLRNTFELEE----IRFVAGVDLVYWELNGKTYGTCCIVVIDFSTHEVVEKVYSYG 79
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
+ +PY+ GFLAFRE P++ + + K+ P + M DGNG LH R G+A+H
Sbjct: 80 EITIPYISGFLAFRELPLIKAAAKKLTKQ-----PDIYMFDGNGYLHYRHIGIATHASFY 134
Query: 195 ANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLK 254
N TIGV K+ + G+ + + + +E + DII + +G A+R+T ++K
Sbjct: 135 LNKPTIGVAKSYLKIKGVDFT----MPENQEGSYTDIII----NNEIYGRALRTT-KSVK 185
Query: 255 PIFISVGHCISLDTAVMIVK--MTCKYRVPEPIRQADIRS 292
PIFIS G+ I L+T+ IV + + R+P P+R AD+ +
Sbjct: 186 PIFISCGNWIDLETSTEIVMRLINKESRLPIPVRLADLET 225
>gi|49478135|ref|YP_037386.1| deoxyinosine 3'endonuclease [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|56404371|sp|Q6HGE0.1|NFI_BACHK RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|49329691|gb|AAT60337.1| deoxyinosine 3'endonuclease (endonuclease V) [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 235
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 132/254 (51%), Gaps = 42/254 (16%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS- 110
+ ++++IQ EL R+ E+ F + EE+ ++I GVD+++ + +
Sbjct: 13 IQEFSKIQSELSPRIKLENNF---------------QIEEI--QFIAGVDLAYWNVNKTK 55
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
CIV++D T ++V + YS + +PY+PGFLAFRE P+++ + + K+ P
Sbjct: 56 YGTCCIVIIDYGTKEVVEKVYSYGEIPIPYIPGFLAFRELPLIIEAVKKLTKQ-----PD 110
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN---LHHVDGLTHSGVRQLLDAKENN 227
+ DGNG LH R G+A+H L N TIGV K+ + VD + ++ N
Sbjct: 111 IYFFDGNGYLHYRHMGIATHASFLLNKPTIGVAKSYLKIRDVDFIMPENLKGSYTDIVIN 170
Query: 228 NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC---KYRVPEP 284
NE +G +R+T + +KPIF+S G+ I LDT+ IV M C + R+P P
Sbjct: 171 NE-----------VYGRTLRTTKN-VKPIFVSCGNWIDLDTSTEIV-MNCINNESRLPIP 217
Query: 285 IRQADIRSRDYLQK 298
+R AD+ + +K
Sbjct: 218 VRLADLETHKMRKK 231
>gi|423636019|ref|ZP_17611672.1| endonuclease V [Bacillus cereus VD156]
gi|401276007|gb|EJR81964.1| endonuclease V [Bacillus cereus VD156]
Length = 234
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 133/254 (52%), Gaps = 42/254 (16%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS- 110
+ ++++IQ EL R+ E+ F + EE+ ++I GVD+++ + +
Sbjct: 12 IQEFSKIQSELSPRIKLENNF---------------QIEEI--QFIAGVDLAYWDVNKTK 54
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
CIV++D T ++V + YS + +PY+PGFLAFRE P+++ + + K+ P
Sbjct: 55 YGTCCIVIIDYGTKEVVEKVYSYGEIPIPYIPGFLAFRELPLIIEAVKKLTKQ-----PD 109
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN---LHHVDGLTHSGVRQLLDAKENN 227
+ + DGNG LH R G+A+H L N TIGV K+ + VD + ++ N
Sbjct: 110 IYIFDGNGYLHYRHMGIATHASFLLNKPTIGVAKSYLKIRDVDFIMPENLKGSYTDIVIN 169
Query: 228 NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC---KYRVPEP 284
NE +G +R+T + +KPIF+S G+ I LDT+ IV M C + R+P P
Sbjct: 170 NE-----------VYGRTLRTTKN-VKPIFVSCGNWIDLDTSTEIV-MNCINNESRLPIP 216
Query: 285 IRQADIRSRDYLQK 298
+R AD+ + +K
Sbjct: 217 VRLADLETHKMRKK 230
>gi|398797802|ref|ZP_10557117.1| deoxyinosine 3'endonuclease (endonuclease V) [Pantoea sp. GM01]
gi|398101967|gb|EJL92163.1| deoxyinosine 3'endonuclease (endonuclease V) [Pantoea sp. GM01]
Length = 222
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 105/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F ++ I +V+L+ +L +V + + +PY+PGFL+FRE P LL
Sbjct: 29 RFIGGADVGF-EQGGEITRAALVILEYPSLTLVEHRIARIATTMPYIPGFLSFREMPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ +R P +L VDG+G+ HPR G+A+H G L ++ TIGV K
Sbjct: 88 EAWQQLSQR-----PDLLFVDGHGISHPRRLGVAAHFGSLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G LDA+ + + +I G W R P+FIS GH +SLD+A+ V+
Sbjct: 136 CGRFAELDAEPGSRQPLIDKGEQIGWVWRSKARCN-----PLFISTGHRVSLDSALHWVE 190
Query: 275 M-TCKYRVPEPIRQAD 289
+ T YR+PEP R AD
Sbjct: 191 VCTSGYRLPEPTRWAD 206
>gi|268593003|ref|ZP_06127224.1| deoxyribonuclease V [Providencia rettgeri DSM 1131]
gi|291311476|gb|EFE51929.1| deoxyribonuclease V [Providencia rettgeri DSM 1131]
Length = 224
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
LK IGG D+ F ++ +I + VL L++V + + Q+PY+PG L+FRE P L
Sbjct: 29 LKLIGGADVGFEQQG-AITRAVVAVLSWPQLELVEYQIARIPTQLPYIPGLLSFREVPGL 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ + ++ + P++++VDG G+ HPR FG+A H G+ AN+ TIGV K+ D +
Sbjct: 88 MAAWEKIQNK-----PELVLVDGQGIAHPRRFGVACHFGLQANIATIGVAKSRLCGDAVE 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
S E + PLM G G +RS KP+++S GH + +++ V
Sbjct: 143 LS----------EEPESVQPLMAGENQL-GWVLRSK-KRCKPLYVSPGHKVGFSSSLEWV 190
Query: 274 KMTCK-YRVPEPIRQAD 289
K K YR+PEP R AD
Sbjct: 191 KQCLKGYRLPEPTRFAD 207
>gi|332708189|ref|ZP_08428180.1| endonuclease V, partial [Moorea producens 3L]
gi|332353042|gb|EGJ32591.1| endonuclease V [Moorea producens 3L]
Length = 188
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 110/197 (55%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ GVD+ F +ED +I+ + V LQ+ + PYVPGFL+FRE PV+
Sbjct: 5 VQYVAGVDVGF-EEDGAISQAAVAVXSFPDLQLRENAIARRPTTFPYVPGFLSFREVPVV 63
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L+ + P +++ DG G+ HPR FGLA H+GVL ++ TIGV K+ D
Sbjct: 64 LDALEKIS-----IIPDLILCDGQGIAHPRRFGLACHLGVLTDIPTIGVAKSRFIGD--- 115
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
H QL + K N PL G G +R T +KP+++S+GH ISL TA+ +
Sbjct: 116 HE---QLPENKGNWQ----PLR-DDGEIIGAVVR-TRTGVKPVYVSIGHRISLPTAIDYV 166
Query: 273 VKMTCKYRVPEPIRQAD 289
++ T +YR+PE R AD
Sbjct: 167 LRCTSRYRLPETTRWAD 183
>gi|325295270|ref|YP_004281784.1| Endonuclease V [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065718|gb|ADY73725.1| Endonuclease V [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 223
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 112/207 (54%), Gaps = 22/207 (10%)
Query: 94 LKYIGGVDMSF--SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
+K I G D++F + P++ G VVL +L+++ Y +L ++VPY+P FLAFRE P
Sbjct: 27 VKLIAGCDLTFLNPYKTPTLGIGAFVVLSYPSLEVIEYAYEILEIKVPYIPSFLAFREIP 86
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
+L+ +K + P +++VDG+G+ HPR G+A+H G++ + TIG K
Sbjct: 87 LLIKTFRKLKNK-----PDIVIVDGHGIAHPRKLGIAAHFGIVEKVPTIGCAKK------ 135
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL-DTAV 270
+ ++ + K E P + G +R T + +KPI+IS G+ I+L DT
Sbjct: 136 PLYGNFKEPCEKKGCYEEIYDP---KTKEILGYVLR-TKNNVKPIYISPGNLITLTDTLS 191
Query: 271 MIVKMTCKYRVPEPIRQADIRSRDYLQ 297
+ + KYR+PEP R A +YLQ
Sbjct: 192 FMQTLKGKYRIPEPTRLA----HNYLQ 214
>gi|395774210|ref|ZP_10454725.1| endonuclease V [Streptomyces acidiscabies 84-104]
Length = 235
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 111/208 (53%), Gaps = 19/208 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I GVD+++ E + VVLD +L++V + ++ R+ PYVPG LAFRE P +++
Sbjct: 41 HITGVDVAYDDER-DVVAAAAVVLDAGSLEVVAQVTAVGRISFPYVPGLLAFRELPTVMA 99
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
LD + P +++ DG GL HPR FGLASH+GVL L TIGV KN
Sbjct: 100 ALDALP-----CAPGLVVCDGYGLAHPRRFGLASHLGVLTGLRTIGVAKNPFTFT----- 149
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVK 274
D E PL G G A+R T +KP+F+SVGH +LD A +
Sbjct: 150 -----YDEPEPARGASAPLRAGH-EEVGRALR-TRAGVKPVFVSVGHRTTLDAACAHTLA 202
Query: 275 MTCKYRVPEPIRQADIRSRDYLQKHQST 302
+T ++R+PE R+AD R LQ+ T
Sbjct: 203 LTPEFRLPETTRRADALCRRALQEATDT 230
>gi|300869118|ref|ZP_07113717.1| Endonuclease V [Oscillatoria sp. PCC 6506]
gi|300332887|emb|CBN58915.1| Endonuclease V [Oscillatoria sp. PCC 6506]
Length = 219
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 27/201 (13%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ GVD+++ +E +IA + VL LQ+ + + + PY+ GFL+FRE P +
Sbjct: 36 IRYVAGVDVAY-EEKTAIAQAAVAVLTFPDLQLKEQVVVQVPVSFPYIAGFLSFREVPAV 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHV 209
L+ L+N+ P +++ DG GL HPR FGLA H+GVL + TIGV K H
Sbjct: 95 LAALENLTTT-----PDLILCDGQGLAHPRRFGLACHLGVLTQVPTIGVAKTRFIGEHEP 149
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
R L D +E ++G A+ T + +KPI+IS+GH +SL+ A
Sbjct: 150 VPSERGSWRPLCDRQE--------IIG--------AVLRTQNGVKPIYISIGHKVSLNKA 193
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
+ +++ T KYR+PE R AD
Sbjct: 194 IDCVMRCTLKYRLPETTRYAD 214
>gi|297203797|ref|ZP_06921194.1| endonuclease V [Streptomyces sviceus ATCC 29083]
gi|197711847|gb|EDY55881.1| endonuclease V [Streptomyces sviceus ATCC 29083]
Length = 229
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 124/253 (49%), Gaps = 36/253 (14%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDP 109
A Q +QDEL+ R + ++ P T T GVD+++ E
Sbjct: 12 ATEEQARAVQDELRPRTVLDE---PGPPPGTGRVT--------------GVDVAYDDER- 53
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
+ VVLD TLQ+V E ++ R+ PYVPG LAFRE P +L+ LD + P
Sbjct: 54 DVVAAAAVVLDAATLQVVAEATAVGRISFPYVPGLLAFREIPTVLAALDALP-----CAP 108
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+++ DG G HPR FGLASH+GVL L TIGV KN D
Sbjct: 109 GLVVCDGYGRAHPRRFGLASHLGVLTGLPTIGVAKNPFTFT----------YDDPGARRG 158
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQA 288
PL+ GS G A+R T + +KP+F+SVGH + LD A + +T YR+PE R+A
Sbjct: 159 AWTPLLAGSEEV-GRALR-TREAVKPVFVSVGHRVILDNACAHTLALTPAYRLPETTRRA 216
Query: 289 DIRSRDYLQKHQS 301
D R L++ S
Sbjct: 217 DALCRQALREATS 229
>gi|237755908|ref|ZP_04584500.1| endonuclease V [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691933|gb|EEP60949.1| endonuclease V [Sulfurihydrogenibium yellowstonense SS-5]
Length = 226
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 117/208 (56%), Gaps = 18/208 (8%)
Query: 94 LKYIGGVDMSF--SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
++YI G+D +F ++P++A IVV+D+++ +IV + + + PYVP FLAFRE P
Sbjct: 30 IRYIAGIDTTFLNPYQNPTLAISSIVVIDIKSFEIVEKVLAEKEIDFPYVPTFLAFRELP 89
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
V+L ++ + + V ++DG G+LHPR G+ASH GV+ + +IG GK + G
Sbjct: 90 VILEAYKKLEIKVD-----VFILDGQGILHPRRMGIASHFGVITDTVSIGCGKTPLY--G 142
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV- 270
Q D N D + G A+R+ +T KPIFIS G+ IS++ ++
Sbjct: 143 KYQDPPNQ--DLAYNFIYD-----PKTNEKIGYALRTKKNT-KPIFISPGNNISIENSLY 194
Query: 271 MIVKMTCKYRVPEPIRQADIRSRDYLQK 298
+I+K Y++PEP+R A DY +K
Sbjct: 195 VIIKSLNGYKLPEPVRLAHNFLSDYRKK 222
>gi|456386707|gb|EMF52243.1| endonuclease [Streptomyces bottropensis ATCC 25435]
Length = 236
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 126/249 (50%), Gaps = 36/249 (14%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDP 109
A Q +QDEL+ ++ ++ P T Y+ GVD+++ E
Sbjct: 19 ATEEQALAVQDELRGEVVLDE---SGPPPGT--------------GYVTGVDVAYDDER- 60
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
+ VVLD +L +V E ++ ++ PYVPG LAFRE P +L+ LD + P
Sbjct: 61 DVVAAAAVVLDAVSLDVVAETTAVGQVSFPYVPGLLAFREIPTVLAALDALPCD-----P 115
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+++ DG GL HPR FGLA+H+GVL L TIGV KN TH D
Sbjct: 116 GLVVCDGYGLAHPRRFGLAAHLGVLTGLPTIGVAKNPFT---FTH-------DDPGTARG 165
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQA 288
PL+ G+ G A+R T D +KP+F+SVGH +SLD A + +T YR+PE R+A
Sbjct: 166 SAAPLLAGT-EEVGRALR-TRDGVKPVFVSVGHRVSLDNACAHTLALTPAYRLPETTRRA 223
Query: 289 DIRSRDYLQ 297
D R L+
Sbjct: 224 DSLCRRALR 232
>gi|284009057|emb|CBA76022.1| endonuclease V [Arsenophonus nasoniae]
Length = 222
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 109/197 (55%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F +E S+ +VV+ +L IV + + + PY+PG L+FRE P LL++
Sbjct: 30 IAGADVGF-EEKGSVTRAAMVVMHWPSLAIVEYHIARIPTEFPYIPGLLSFREYPALLAV 88
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLT 213
+ ++ + P ++M+DG G+ HPR FG+ASH+G+L ++ TIG+ K HH
Sbjct: 89 WEKLQHK-----PDLIMIDGQGIAHPRRFGVASHLGLLLDIPTIGIAKKRLCGHHEALDE 143
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G Q L+ +NNE I G RS KP++IS GH ISL+ +++ V
Sbjct: 144 RVGSSQPLN---DNNEQI-----------GWVFRSK-KRCKPLYISPGHKISLNASLLWV 188
Query: 274 KMTCK-YRVPEPIRQAD 289
K K YR+PEP R AD
Sbjct: 189 KHCIKGYRLPEPTRWAD 205
>gi|386813865|ref|ZP_10101089.1| deoxyribonuclease [planctomycete KSU-1]
gi|386403362|dbj|GAB63970.1| deoxyribonuclease [planctomycete KSU-1]
Length = 229
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 108/208 (51%), Gaps = 23/208 (11%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+S+ K+ G IV + L+ + E ++ + + PY+PG L+FREAP+LL
Sbjct: 39 IAGADVSYDKQSDYFFAGVIVFTLNKYLEQIEEATAIGKARFPYIPGLLSFREAPILLKA 98
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+K P +++ DG G+ HPR GLASH+G++ + TIG K S
Sbjct: 99 FRKLKNE-----PDIILFDGQGIAHPRHLGLASHMGLILDKPTIGCAK----------SR 143
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ EN L+ G A+R+ +T KP+FIS GH +L A+ IV +
Sbjct: 144 LVGEYSPVENAVGSYTKLL-YKNEVVGAALRTKINT-KPVFISPGHKTNLAFAIRIVMAS 201
Query: 277 C-KYRVPEPIRQA-----DIRSRDYLQK 298
C +YR+PEPIRQA +R +LQK
Sbjct: 202 CYRYRIPEPIRQAHLLVNKLRKESHLQK 229
>gi|254412018|ref|ZP_05025793.1| Endonuclease V superfamily [Coleofasciculus chthonoplastes PCC
7420]
gi|196180984|gb|EDX75973.1| Endonuclease V superfamily [Coleofasciculus chthonoplastes PCC
7420]
Length = 212
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 38/239 (15%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
+ + T IQ++L + +IT D + EV KY+ GVD+ F +++ +I
Sbjct: 3 VEEATAIQNQLSREIITSD-----------------QLGEV--KYVAGVDVGF-EDNYAI 42
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
+ + VL LQ++ + + PY+PGFL+FRE PV++ L +K P +
Sbjct: 43 SRAAVAVLSFPELQLIEQAIARRPTNFPYIPGFLSFREVPVVMDALSQIK-----ITPDL 97
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
++ DG G+ HPR FGLA H+G+L + TIGV K+ G + L ++ N +
Sbjct: 98 ILCDGQGIAHPRRFGLACHLGLLITVPTIGVAKS-------RLIGQHEELPPEKGNWQP- 149
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+ G G +RS +KP+++S GH ISL TA+ +++ T KYR+PE R AD
Sbjct: 150 ---LRHRGEVIGAVVRSR-TGVKPLYVSPGHRISLPTAIDYVLRCTPKYRLPETTRWAD 204
>gi|328953062|ref|YP_004370396.1| Endonuclease V [Desulfobacca acetoxidans DSM 11109]
gi|328453386|gb|AEB09215.1| Endonuclease V [Desulfobacca acetoxidans DSM 11109]
Length = 230
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 111/199 (55%), Gaps = 19/199 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + GVD+S+SK + I G IV+++ + +V + PY+PG L+FREAP+LL
Sbjct: 34 RLLAGVDVSYSKAERKI-FGSIVIMNFPEMTVVETAGMTGEERFPYIPGLLSFREAPILL 92
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L ++ R P++++VDG G+ HPRG GLASH+G+L+ + TIG K+ D
Sbjct: 93 EALAKIQHR-----PELILVDGQGIAHPRGLGLASHLGLLSGIPTIGCAKSRLWGD---- 143
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
D + PL G G +RS + +P+FIS GH +++ ++ IV+
Sbjct: 144 ------FDTLGDQAGSCRPL-SWHGQQLGWVLRSK-NNCRPLFISPGHLVTMAESLTIVR 195
Query: 275 MTC-KYRVPEPIRQADIRS 292
+ KYR+P P+R+A + S
Sbjct: 196 LCLRKYRLPLPLREAHLLS 214
>gi|296269642|ref|YP_003652274.1| deoxyribonuclease V [Thermobispora bispora DSM 43833]
gi|296092429|gb|ADG88381.1| Deoxyribonuclease V [Thermobispora bispora DSM 43833]
Length = 279
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 114/206 (55%), Gaps = 21/206 (10%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD++++ E +VVLD TL+++ + R+ YVPG LAFRE P L++
Sbjct: 93 VAGVDVAYAGER---LVAAVVVLDGATLEVLEQVAVPGRVAFDYVPGLLAFRELPGLITA 149
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L+ + + P++++ DG GL HPR FGLA H+GVL L TIGVGK +V G
Sbjct: 150 LERLTR-----TPELIVCDGYGLAHPRRFGLACHLGVLTGLPTIGVGKT-AYVGTYEMPG 203
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
R+ ++ +D++ G +R T D +KP+F+SVG+ I LDTA V
Sbjct: 204 RRRGSWSELRLGDDVV----------GRVLR-TQDDVKPVFVSVGNRIDLDTACANVLAL 252
Query: 277 C-KYRVPEPIRQADIRSRDYLQKHQS 301
C ++R+PE R AD SR L + +
Sbjct: 253 CPRHRLPETTRAADRLSRAVLTRGTT 278
>gi|330501900|ref|YP_004378769.1| endonuclease V [Pseudomonas mendocina NK-01]
gi|328916187|gb|AEB57018.1| endonuclease V [Pseudomonas mendocina NK-01]
Length = 237
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 127/250 (50%), Gaps = 34/250 (13%)
Query: 66 LITEDFFTWNLPNSTTTNTSTK-------EEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
L F W+ + T+ E++ L+ + GVD+ F +E +I V+
Sbjct: 7 LAASPFAGWDGSPAAARELQTQLARQVRLEDDYPPLRRVAGVDVGF-EEGGAITRAAAVL 65
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
LD TLQ + E + +PYVPG L+FRE P LL L ++ P ++ VDG+G
Sbjct: 66 LDADTLQPLAECVVRIPTSMPYVPGLLSFRELPALLRALADLP-----HVPDIVFVDGHG 120
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNNEDIIPLM 235
+ HPRG G+A+H+GV++ L TIGV K + HH + G R + L+
Sbjct: 121 IAHPRGLGIAAHLGVVSGLPTIGVAKKVLTGHHAELNELRGSR-------------VALL 167
Query: 236 GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQAD-IRS 292
G G +RS D ++P+ +S G+ +SL+ A +V M C ++R+PEP R AD + S
Sbjct: 168 SRRGERIGWVLRSK-DRVRPLIVSPGNRVSLERAPELV-MACVRRHRLPEPTRLADRLAS 225
Query: 293 RDYLQKHQST 302
R ++ Q +
Sbjct: 226 RRDARRDQPS 235
>gi|154249047|ref|YP_001409872.1| deoxyribonuclease V [Fervidobacterium nodosum Rt17-B1]
gi|154152983|gb|ABS60215.1| Deoxyribonuclease V [Fervidobacterium nodosum Rt17-B1]
Length = 225
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 108/195 (55%), Gaps = 23/195 (11%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVL--DLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
I GVD+S+ ++ A G +VVL DL+ + +VY S+ ++ PY+PGFLAFREAP++
Sbjct: 38 IAGVDVSYFEDK---ALGVVVVLNKDLELIDVVY---SIDKVTFPYIPGFLAFREAPIIF 91
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + R + P +++ DG+G+ HPRG G+ASHIGVL N+ TIGV K + +
Sbjct: 92 KCFEKL--REKNIVPDIVLFDGHGIAHPRGLGIASHIGVLLNIPTIGVAKRKLYGKCVEP 149
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
V Q PL G G ++ PI+IS GH S +T++ VK
Sbjct: 150 KRVGQS-----------TPLFDEEGKIIGYCYLPKKNS-HPIYISPGHLSSPETSLEFVK 197
Query: 275 -MTCKYRVPEPIRQA 288
+ K+++PEP R A
Sbjct: 198 SLIKKHKLPEPTRLA 212
>gi|172039482|ref|YP_001805983.1| endonuclease V [Cyanothece sp. ATCC 51142]
gi|354552251|ref|ZP_08971559.1| Deoxyribonuclease V [Cyanothece sp. ATCC 51472]
gi|171700936|gb|ACB53917.1| endonuclease V [Cyanothece sp. ATCC 51142]
gi|353555573|gb|EHC24961.1| Deoxyribonuclease V [Cyanothece sp. ATCC 51472]
Length = 169
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/187 (37%), Positives = 102/187 (54%), Gaps = 28/187 (14%)
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
+ VL L +L++V +L+ PY+PGFL+FRE P LL +++ + P +++
Sbjct: 4 AAVAVLKLPSLELVESQTALIPTTFPYIPGFLSFREIPALLKVIEKLT-----IIPDIIL 58
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHVDGLTHSGVRQLLDAKENNNE 229
DG G+ HPR G+ASH+GVL N+ TIGV K+L H L + L+D KE
Sbjct: 59 CDGQGIAHPRRLGIASHLGVLLNIPTIGVAKSLLIGKHEEVPLEKGSWKPLIDKKE---- 114
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQ 287
G +RS + +KPI++S+GH ISL TA+ V M C KYR+PE R
Sbjct: 115 -----------VIGAVLRSRTN-VKPIYVSIGHKISLPTALDYV-MACLTKYRLPETTRW 161
Query: 288 ADIRSRD 294
AD + D
Sbjct: 162 ADKLASD 168
>gi|307153647|ref|YP_003889031.1| deoxyribonuclease V [Cyanothece sp. PCC 7822]
gi|306983875|gb|ADN15756.1| Deoxyribonuclease V [Cyanothece sp. PCC 7822]
Length = 231
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/246 (33%), Positives = 124/246 (50%), Gaps = 44/246 (17%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + T IQ +L+ ++ITED + Y+ GVD+ F K++ +I
Sbjct: 16 LEEATLIQTKLRNQVITEDRLGD-------------------IHYVAGVDVGF-KDNYTI 55
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
+ VL LQ+V + L PY+PGFL+FRE P +L L+ + P +
Sbjct: 56 TQAAVAVLSFPDLQLVDSAITTLPTCFPYIPGFLSFREIPGILQALEKLT-----ITPDL 110
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNN 228
++ DG G+ HPR FG+A H+GVL ++ TIGV K++ H + G Q ++ K+
Sbjct: 111 IICDGQGIAHPRRFGIACHLGVLIDVPTIGVAKSILVGKHTELPPEKG--QWVELKDR-- 166
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQ 287
G G +RS + +KP+++SVGH ISL TA + K KYR+PE R
Sbjct: 167 ----------GEIIGAVVRSRTN-VKPLYVSVGHRISLATARDYVFKCLTKYRLPETTRL 215
Query: 288 ADIRSR 293
AD SR
Sbjct: 216 ADKLSR 221
>gi|441175132|ref|ZP_20969742.1| endonuclease V [Streptomyces rimosus subsp. rimosus ATCC 10970]
gi|440614814|gb|ELQ78052.1| endonuclease V [Streptomyces rimosus subsp. rimosus ATCC 10970]
Length = 242
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 101/184 (54%), Gaps = 21/184 (11%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
+L +V E ++ R+ PYVPG LAFRE P ++ L + + P +++ DG GL HP
Sbjct: 74 SLAVVEEATAVGRVSFPYVPGLLAFREIPTVVDALGRLGR-----TPDLVVCDGYGLAHP 128
Query: 183 RGFGLASHIGVLANLTTIGVGKN----LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGS 238
R FGLASH+GVL L TIGV KN + + G+ L+D + ++++
Sbjct: 129 RRFGLASHLGVLTGLPTIGVAKNPFTSRYELPGVERGESSPLVDGSGDEGDEVV------ 182
Query: 239 GSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQ 297
G A+R T +KP+F+SVGH I LD A + +T KYR+PE R AD R L
Sbjct: 183 ----GRALR-TQKGVKPVFVSVGHRIDLDRACAHTLHLTPKYRIPETTRAADALCRRALS 237
Query: 298 KHQS 301
+ ++
Sbjct: 238 EART 241
>gi|383786433|ref|YP_005471002.1| deoxyinosine 3'endonuclease [Fervidobacterium pennivorans DSM 9078]
gi|383109280|gb|AFG34883.1| deoxyinosine 3'endonuclease (endonuclease V) [Fervidobacterium
pennivorans DSM 9078]
Length = 223
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 113/200 (56%), Gaps = 26/200 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLD--LQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
I GVD+S+ + A G +VV++ + +++V+E L++ PY+PGFLAFREAPV+L
Sbjct: 43 IAGVDVSYVDDQ---ALGIVVVINKNFEIIEVVHER---LKVTFPYIPGFLAFREAPVIL 96
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ +K P V++ DG G+ HPR G+ASH+G+L N+ TIGV K + +
Sbjct: 97 KCFEKLKNT-----PDVILFDGQGIAHPRRLGIASHVGILLNIPTIGVAKTILYGKCEKP 151
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
S V Q + K+ N E I G S +T KPI IS G+ L++++ IVK
Sbjct: 152 SFVGQATELKDRNGEVI-----------GFCYLSKKNT-KPIVISPGYKTDLESSLHIVK 199
Query: 275 -MTCKYRVPEPIRQADIRSR 293
+ +++PEP+R A S+
Sbjct: 200 SLLNGFKLPEPVRLAHYYSQ 219
>gi|238062997|ref|ZP_04607706.1| endonuclease [Micromonospora sp. ATCC 39149]
gi|237884808|gb|EEP73636.1| endonuclease [Micromonospora sp. ATCC 39149]
Length = 228
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 111/201 (55%), Gaps = 19/201 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D+++++ +A + VL+ +TL +V + S+ R PYVPG AFRE P LL+
Sbjct: 40 VAGLDVAYAESGDRLAA-AVTVLEARTLAVVDQAVSVGRPAFPYVPGLFAFRELPALLAA 98
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
LD + R P++L+ DG+GL HPR FGLA H+GV+ L IGVGK +
Sbjct: 99 LDRLTVR-----PELLVCDGHGLAHPRRFGLACHLGVVTGLPAIGVGK----------TP 143
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKM 275
+ + PL G G G +R T D +KP+F+SVGH + L+ A ++ +
Sbjct: 144 LVGRWEPPAVARGAWSPLHDG-GEVVGRVLR-TRDGVKPVFVSVGHRMGLENASDRVLAL 201
Query: 276 TCKYRVPEPIRQADIRSRDYL 296
T ++R+PE R AD RD L
Sbjct: 202 TPRHRLPETTRTADRLCRDAL 222
>gi|268610620|ref|ZP_06144347.1| deoxyribonuclease V [Ruminococcus flavefaciens FD-1]
Length = 227
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 113/202 (55%), Gaps = 16/202 (7%)
Query: 94 LKYIGGVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
L+ GVD+++ K D A CIVV+D++T +++ + + R+ VPY+PGFLAFRE P+
Sbjct: 29 LETAAGVDLAYWKKGDDEYAVCCIVVIDIKTHEVIEKQHFSGRIDVPYMPGFLAFRELPL 88
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+L ++ ++ + P + + DGNG LHPR G+A+H + TIG+ K D
Sbjct: 89 VLKTVELLEVK-----PDIYVFDGNGYLHPRHMGIATHASFYLDKPTIGIAKTYFRADRK 143
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
T + + + DI+ G +G A+R+ D +KP+F+SVG+ I++DTA +
Sbjct: 144 TDF---IMPENEAGGYTDIVI----EGEVYGRALRTHKD-VKPVFVSVGNNITIDTACKL 195
Query: 273 VKMTC--KYRVPEPIRQADIRS 292
M + +P P R AD+ +
Sbjct: 196 AMMLTDKESHIPIPTRLADLET 217
>gi|383648247|ref|ZP_09958653.1| endonuclease V [Streptomyces chartreusis NRRL 12338]
Length = 230
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 127/253 (50%), Gaps = 36/253 (14%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDP 109
A Q +QDEL++R+I ++ P T T GVD+++ E
Sbjct: 12 ATEEQARAVQDELRERVILDE---PGPPPGTGRVT--------------GVDVAYDDER- 53
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
+ VVLD TL IV E ++ R+ PYVPG LAFRE P +L+ LD + P
Sbjct: 54 DVVAAAAVVLDAATLDIVAEATAVGRVSFPYVPGLLAFRELPTVLAALDALP-----CPP 108
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+++ DG GL HPR FGLA+H+GVL L TIGV KN D +
Sbjct: 109 GLVVCDGYGLAHPRRFGLAAHLGVLTGLPTIGVAKNPFTF----------TYDDPDAPRG 158
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQA 288
L+ GS G A+R T D +KP+F+SVGH ++L A + +T +YR+PE R+A
Sbjct: 159 STSALLAGS-EEVGRALR-TRDGVKPVFVSVGHRVTLANACAHTLALTPEYRLPETTRRA 216
Query: 289 DIRSRDYLQKHQS 301
D R L++ S
Sbjct: 217 DALCRKALRETYS 229
>gi|156937131|ref|YP_001434927.1| endonuclease V [Ignicoccus hospitalis KIN4/I]
gi|189029071|sp|A8A9B8.1|NFI_IGNH4 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|156566115|gb|ABU81520.1| Endonuclease V [Ignicoccus hospitalis KIN4/I]
Length = 211
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 27/204 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+GG+D+S+ + + + ++D +TL+ + Y + R+ +PYVPGFLAFREAP+ L+L
Sbjct: 33 VGGLDVSYKGD---VGVSALSLIDYKTLRPLKHYYVVARVPIPYVPGFLAFREAPLHLTL 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ +K +L+VDG+G HPRG G+ASH+GV + + T+GV K
Sbjct: 90 IKKVKGY------DLLLVDGHGRTHPRGLGIASHVGVTSGVPTVGVAK------------ 131
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
R+L+ +E E + G +R L ++SVGHC+SL+TA IVK
Sbjct: 132 -RRLVGEEERCGERE--CLVHEGKVVAYVIRRGKQKL---YVSVGHCVSLETAYQIVKRL 185
Query: 277 CKYRVPEPIRQADIRSRDYLQKHQ 300
R+PEPI AD SR + Q
Sbjct: 186 TVRRLPEPIAWADRISRSLARSLQ 209
>gi|146305934|ref|YP_001186399.1| endonuclease V [Pseudomonas mendocina ymp]
gi|145574135|gb|ABP83667.1| Endonuclease V [Pseudomonas mendocina ymp]
Length = 237
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 111/207 (53%), Gaps = 26/207 (12%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
E++ L+ + GVD+ F +E +I V+LD TLQ + E + +PYVPG L+F
Sbjct: 36 EDDHPPLRRLAGVDVGF-EEGGAITRAAAVLLDADTLQPLAECVVRIPTSMPYVPGLLSF 94
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL- 206
RE P LL L + + P ++ VDG+G+ HPRG G+A+H+GV++ TIGV K +
Sbjct: 95 RELPALLQALAGLPQE-----PDLIFVDGHGIAHPRGLGIAAHLGVVSGFATIGVAKKIL 149
Query: 207 --HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCI 264
HH + G R I L+ G G +RS D ++P+ +S G+ +
Sbjct: 150 TGHHAELAETRGAR-------------IELLSRRGEQIGWVLRSK-DRVRPLIVSPGNRV 195
Query: 265 SLDTAVMIVKMTC--KYRVPEPIRQAD 289
SL+ +V M C ++R+PEP R AD
Sbjct: 196 SLERVPELV-MACVRRHRLPEPTRLAD 221
>gi|423488330|ref|ZP_17465012.1| endonuclease V [Bacillus cereus BtB2-4]
gi|423494051|ref|ZP_17470695.1| endonuclease V [Bacillus cereus CER057]
gi|423499155|ref|ZP_17475772.1| endonuclease V [Bacillus cereus CER074]
gi|401152528|gb|EJQ59962.1| endonuclease V [Bacillus cereus CER057]
gi|401158128|gb|EJQ65522.1| endonuclease V [Bacillus cereus CER074]
gi|402435121|gb|EJV67157.1| endonuclease V [Bacillus cereus BtB2-4]
Length = 234
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 133/251 (52%), Gaps = 36/251 (14%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF-SKEDPS 110
+N++T+IQ+EL ++ NL N N +K I G+D+++ + +
Sbjct: 12 INEFTDIQNELLSKV--------NLENRFDVNE---------IKNIAGIDLAYWDVNNKT 54
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
CIV++D T ++V + YS + +PY+ GFLAFRE P+ +L+ KK +N P
Sbjct: 55 YGTCCIVMIDYYTKEVVEKVYSYGEISIPYISGFLAFRELPL---ILEAAKKLSNE--PD 109
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
+ M DGNG LH R G+A+H + N TIGV K+ ++ + + ++ + + D
Sbjct: 110 LYMFDGNGYLHYRHMGIATHAAMYLNKPTIGVAKSYLKIENVDATMPKEEVGSY----TD 165
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC---KYRVPEPIRQ 287
I+ G +G +R T +KPIF+S G+ I LDT+ +V M C + R+P P+R
Sbjct: 166 IVI----HGDIYGRVLR-TSYCVKPIFVSCGNWIDLDTSTEVV-MNCINNESRLPIPVRL 219
Query: 288 ADIRSRDYLQK 298
AD+ + +K
Sbjct: 220 ADLETHKMRKK 230
>gi|384567527|ref|ZP_10014631.1| deoxyinosine 3'endonuclease (endonuclease V) [Saccharomonospora
glauca K62]
gi|384523381|gb|EIF00577.1| deoxyinosine 3'endonuclease (endonuclease V) [Saccharomonospora
glauca K62]
Length = 232
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 109/209 (52%), Gaps = 19/209 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+++ + P +A +VVLD TL+++ + + PY PG AF E P +
Sbjct: 37 VRTVAGVDVAYDRNSPRLAA-AVVVLDHTTLEVLETSTVVTTTEFPYEPGLFAFWELPAV 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ L ++ P +L+ DG+GL HPR FGLA H+GVL + T GV K +
Sbjct: 96 VEALRRLRT-----TPDLLVCDGHGLAHPRRFGLACHLGVLTGVPTFGVAKTVF------ 144
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
V + + PL+ G G A+R T D +KP+F+S+GH I LDTA
Sbjct: 145 ---VGEFVPPASKRGS-WSPLV-ADGEVVGAAVR-TRDGVKPVFVSIGHRIDLDTARDHT 198
Query: 273 VKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
+ + KYR+PE R AD SR+ L S
Sbjct: 199 ITLCTKYRLPETTRHADHLSREVLAGRIS 227
>gi|354564783|ref|ZP_08983959.1| Endonuclease V [Fischerella sp. JSC-11]
gi|353549909|gb|EHC19348.1| Endonuclease V [Fischerella sp. JSC-11]
Length = 221
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 23/212 (10%)
Query: 86 TKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLR--LQVPYVPG 143
T ++ + ++Y+ GVDM F + D +I+ + VL L++ ++ SL R PY+PG
Sbjct: 29 TSDQLQQPVQYVAGVDMGF-EADGTISRAAVAVLSFPELEL--QETSLARRPTSFPYIPG 85
Query: 144 FLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVG 203
FL+FRE P +L L+ +K P +++ DG G+ HPR FG+A H+GV+ N+ +IGV
Sbjct: 86 FLSFREIPAVLDALEKIK-----ITPDLILCDGQGIAHPRRFGIACHLGVIVNIPSIGVA 140
Query: 204 KNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHC 263
K+L G + L + + +I G G +R T +KP+++S GH
Sbjct: 141 KSL-------LVGKHEELPDTRGSWQPLI----HKGEIVGAVLR-TRVGVKPVYVSSGHR 188
Query: 264 ISLDTAV-MIVKMTCKYRVPEPIRQADIRSRD 294
ISL TA+ +++ T KYR+PE R AD + D
Sbjct: 189 ISLPTAIDYVLRCTPKYRLPETTRIADKLASD 220
>gi|291279252|ref|YP_003496087.1| deoxyribonuclease V [Deferribacter desulfuricans SSM1]
gi|290753954|dbj|BAI80331.1| deoxyribonuclease V [Deferribacter desulfuricans SSM1]
Length = 216
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 106/202 (52%), Gaps = 24/202 (11%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G+D+SFS + C C +V+ + L+IV + ++ +PY+PG L+FRE P +
Sbjct: 28 IAGIDVSFSIKHS--LCFCSIVILNKNLEIVEISNAHRKINLPYIPGLLSFRELPAIFLA 85
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+K +P + ++D G+ HPR GLASH GV+ N+ TIG K+
Sbjct: 86 YKKLKS-----HPDIFILDSQGIAHPRKLGLASHFGVVFNVPTIGCAKS----------- 129
Query: 217 VRQLLDAKE--NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV- 273
+ + KE +N D L G +RS + +KPIFIS GH + ++ + IV
Sbjct: 130 -KLVGKYKEPGHNKGDYTKLY-HKNELVGYVLRSRTN-VKPIFISPGHLVDFESVLKIVL 186
Query: 274 KMTCKYRVPEPIRQADIRSRDY 295
TCKYR+PEP RQA I + Y
Sbjct: 187 STTCKYRIPEPTRQAHISAEKY 208
>gi|378581865|ref|ZP_09830506.1| endonuclease V (deoxyinosine 3'endoduclease) [Pantoea stewartii
subsp. stewartii DC283]
gi|377815510|gb|EHT98624.1| endonuclease V (deoxyinosine 3'endoduclease) [Pantoea stewartii
subsp. stewartii DC283]
Length = 222
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 109/196 (55%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D F +E ++ +V+L+ +L+++ + + +PY+PGFL+FRE P LL
Sbjct: 29 RFIGGADAGFEQEG-AVTRAALVILEYPSLKLLEHRIARIETTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + ++++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K
Sbjct: 88 AAWNMLEQK-----PDLLFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
G + LD + + ++ G W +R P+F++ GH +SLD+A+ +
Sbjct: 136 CGRFEPLDETPGSRQPLMDKGEQIGWVWRSKVRCN-----PLFVATGHRVSLDSALDWVE 190
Query: 274 KMTCKYRVPEPIRQAD 289
K T YR+PEP R AD
Sbjct: 191 KCTQGYRLPEPTRWAD 206
>gi|423469534|ref|ZP_17446278.1| endonuclease V [Bacillus cereus BAG6O-2]
gi|402438441|gb|EJV70452.1| endonuclease V [Bacillus cereus BAG6O-2]
Length = 234
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 132/251 (52%), Gaps = 36/251 (14%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF-SKEDPS 110
+N++T IQ+EL ++ E+ F N +K I G+D+++ + +
Sbjct: 12 INEFTNIQNELLSKVNLENRFDVNE-----------------IKTIAGIDLAYWDVNNKT 54
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
CIV++D T ++V + YS + +PY+ GFLAFRE P+ +L+ KK +N P
Sbjct: 55 YGTCCIVMIDYYTKEVVEKVYSYGEISIPYISGFLAFRELPL---ILEAAKKLSNE--PD 109
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
+ M DGNG LH R G+A+H + N TIGV K+ ++ + + ++ + + E
Sbjct: 110 LYMFDGNGYLHYRHMGIATHAAMYLNKPTIGVAKSYLKIENVDATMPKEEVGSY---TEI 166
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC---KYRVPEPIRQ 287
+I G +G +R T +KPIF+S G+ I LDT+ IV M C + R+P P+R
Sbjct: 167 VI-----HGDIYGRVLR-TSYCVKPIFVSCGNWIDLDTSTEIV-MNCINNESRLPIPVRL 219
Query: 288 ADIRSRDYLQK 298
AD+ + +K
Sbjct: 220 ADLETHKMRKK 230
>gi|431925913|ref|YP_007238947.1| deoxyinosine 3'endonuclease [Pseudomonas stutzeri RCH2]
gi|431824200|gb|AGA85317.1| deoxyinosine 3'endonuclease (endonuclease V) [Pseudomonas stutzeri
RCH2]
Length = 242
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 106/201 (52%), Gaps = 25/201 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F +E SI V+LD TL++V + + +PY+PG L+FRE P +
Sbjct: 42 LRLIAGVDVGF-EEGGSITRAAAVLLDADTLELVGSSLARIPTNMPYIPGLLSFRELPAV 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHV 209
L L + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K L H
Sbjct: 101 LQALAELPA-----VPDLIFSDGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKLLTGEHDE 155
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
LT L D K SG G +RS D ++P+ IS G+ +S+ TA
Sbjct: 156 LDLTRGAQVALRDKK-------------SGEVIGCVLRSK-DKVRPLIISPGNRVSIATA 201
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
++++ +YR+PEP R AD
Sbjct: 202 PELVMRYLTRYRLPEPTRLAD 222
>gi|224006528|ref|XP_002292224.1| dolichyl pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase [Thalassiosira pseudonana
CCMP1335]
gi|220971866|gb|EED90199.1| dolichyl pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase [Thalassiosira pseudonana
CCMP1335]
Length = 250
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 114/229 (49%), Gaps = 26/229 (11%)
Query: 97 IGGVDMSFSKEDPSI--ACGCIVVLDLQ---------TLQIVYEDYSLLRLQVPYVPGFL 145
+GG+D+SF K+D + A V+L T Q+VY + + +PY+ +L
Sbjct: 23 VGGLDVSFPKDDDNNQEAVAVYVILRYNNYPCTTITTTPQLVYRSHKFFKPTIPYIASYL 82
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
AFREA LL L+ + P VL VDGNG H R G+A +GV + T+GVGKN
Sbjct: 83 AFREAIPLLQLISTQIQAQPEITPNVLFVDGNGQWHERRAGIACFVGVETGIPTVGVGKN 142
Query: 206 LHHVDGLTHSGVRQL-----------LDAKENNNEDIIPL-MGGSGSTWGVAMRSTPDTL 253
+ +DG+ S L L + N D++ + G G +R +
Sbjct: 143 FYSLDGVITSMDEMLTSLHLIANGLSLPMLDRNTADVLAYALVGHGGNVCNGVRGVRN-- 200
Query: 254 KPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQST 302
PI+IS G I+L+ AV++ K RVPEP+R+AD R L++ ++T
Sbjct: 201 -PIYISAGSNITLEDAVVLSAHLSKSRVPEPVREADSYGRKLLREQRTT 248
>gi|440705705|ref|ZP_20886471.1| deoxyribonuclease V [Streptomyces turgidiscabies Car8]
gi|440272546|gb|ELP61430.1| deoxyribonuclease V [Streptomyces turgidiscabies Car8]
Length = 232
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 125/242 (51%), Gaps = 36/242 (14%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QDEL+ R++ ++ P T ++ GVD+++ E + V
Sbjct: 23 VQDELRLRVVLDE---PGPPPGT--------------GHVTGVDVAYDDER-DLVVAAAV 64
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VLD +L +V E + + PYVPG LAFRE P +L+ L+ + P +++ DG
Sbjct: 65 VLDAASLDVVAEATAAGHVPFPYVPGLLAFREIPAVLAALEALP-----VPPGIVVCDGY 119
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
G+ HPR FGLASH+GVL L TIGV KN G R PL+ G
Sbjct: 120 GVAHPRRFGLASHLGVLTRLPTIGVAKNPFAFTYEEPGGRRG----------SASPLLAG 169
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYL 296
+ G A+R T D +KP+F+SVGH +SLDTA + +T +YR+PE R+AD R L
Sbjct: 170 T-EEVGRALR-TRDAVKPVFVSVGHRVSLDTACAHTLALTPEYRLPETTRRADALCRRAL 227
Query: 297 QK 298
++
Sbjct: 228 KE 229
>gi|53802777|ref|YP_112585.1| endonuclease V [Methylococcus capsulatus str. Bath]
gi|62286977|sp|Q60CT7.1|NFI_METCA RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|53756538|gb|AAU90829.1| endonuclease V [Methylococcus capsulatus str. Bath]
Length = 222
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 121/229 (52%), Gaps = 37/229 (16%)
Query: 74 WNLPNSTTTNTSTKEEEEVL--------LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQ 125
W+L N T+ VL ++ + GVD+ F ++ I + VLD +L+
Sbjct: 11 WDLSPREAANLQTRLRPLVLAEDALPDEIRTVAGVDVGF-EDHGRITRAAVAVLDFPSLR 69
Query: 126 IVYEDYSLLR--LQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPR 183
D +++R + PYVPG L+FRE P LL L+ + + P +++VDG+G HPR
Sbjct: 70 --PSDQAIVRRPTRFPYVPGLLSFRELPALLEALERL-----NLLPGLILVDGHGYAHPR 122
Query: 184 GFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED---IIPLMGGSGS 240
FG+A H+GVL + TIGVGK +L+ ED IPL+ G
Sbjct: 123 RFGIACHLGVLTGIPTIGVGKT-------------RLVGTHGELAEDRGSWIPLIDGD-E 168
Query: 241 TWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
T G +R T ++P+++SVGH +SL TAV +++ T +YR+PE RQA
Sbjct: 169 TVGAVVR-TRRGVQPVYVSVGHRLSLPTAVDWVLRCTPRYRLPETTRQA 216
>gi|239992072|ref|ZP_04712736.1| putative endonuclease [Streptomyces roseosporus NRRL 11379]
gi|291449059|ref|ZP_06588449.1| endonuclease V [Streptomyces roseosporus NRRL 15998]
gi|291352006|gb|EFE78910.1| endonuclease V [Streptomyces roseosporus NRRL 15998]
Length = 230
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/260 (35%), Positives = 128/260 (49%), Gaps = 38/260 (14%)
Query: 42 ASPDPAAQ--AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
+SP PA + A + IQD L+ R+I ++ P T + G
Sbjct: 3 SSPAPAHETPADEAEGRAIQDRLRDRVILDEAG----PEPGT-------------GLVTG 45
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+++ E + VVLD TL+ V E ++ + PYVPG LAFRE P +L L+
Sbjct: 46 VDVAYDDEK-DVVVAAAVVLDAATLETVEEATAVGTIAFPYVPGLLAFREIPTVLEALEE 104
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
+ P +++ DG GL HPR FGLASH+GVL L IGVGKN
Sbjct: 105 LSAD-----PGLVVCDGYGLAHPRRFGLASHLGVLTGLPVIGVGKNPFTF---------- 149
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCK 278
+A D PL+ G G A+R+ +T P+F+SVGH ISLD A +++ +
Sbjct: 150 TYEAPGPRRGDSSPLLDGD-EVVGRALRTRENT-SPVFVSVGHRISLDNACAHTLRLAGR 207
Query: 279 YRVPEPIRQADIRSRDYLQK 298
YR PE R+AD R L++
Sbjct: 208 YRQPESTRRADALCRQTLRE 227
>gi|297190613|ref|ZP_06908011.1| endonuclease V [Streptomyces pristinaespiralis ATCC 25486]
gi|197717924|gb|EDY61832.1| endonuclease V [Streptomyces pristinaespiralis ATCC 25486]
Length = 231
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 101/180 (56%), Gaps = 21/180 (11%)
Query: 122 QTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLH 181
+TL +V E ++ R+ PYVPG LAFRE P +L+ L+++ P +++ DG GL H
Sbjct: 66 ETLTVVEEATAIGRITFPYVPGLLAFREIPTVLAALESLTAG-----PGLVLCDGYGLAH 120
Query: 182 PRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE--DIIPLMGGSG 239
PR FGLASH+GVL L +IGV KN + E E D+ PL+ G
Sbjct: 121 PRRFGLASHLGVLTGLPSIGVAKNPF------------VFTYGELGPERGDVAPLLADDG 168
Query: 240 STWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQK 298
G A+R T +KP+F+S GH ++LD+A +++ ++RVP+ R+AD R L +
Sbjct: 169 EEVGRALR-TQQGVKPVFVSAGHRVTLDSACAHTLRLAPEFRVPQTTRRADALCRRALAE 227
>gi|225850626|ref|YP_002730860.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Persephonella marina EX-H1]
gi|225646140|gb|ACO04326.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Persephonella marina EX-H1]
Length = 231
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 118/212 (55%), Gaps = 21/212 (9%)
Query: 94 LKYIGGVDMSFSK--EDPSIACGCIVVLDLQ-TLQIVYEDYSLLRLQVPYVPGFLAFREA 150
++Y+ GVD++F+ + ++A CI V+D++ + V +S + PY+P FLA+RE
Sbjct: 37 IRYVAGVDVTFTDIWKKETVAIACITVIDIKDNFKEVETVFSEREIDFPYIPTFLAYREL 96
Query: 151 PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
P +L + ++ + F ++DG G+LHPR G+ASH GV+ ++G GK
Sbjct: 97 PPVLDAYEKIRSEVDAF-----IIDGMGILHPRKMGIASHFGVITGEISVGCGK------ 145
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
S + + EN N P+ G G +R+ +T KPIF+S G+ IS+D+++
Sbjct: 146 ----SKLVGQFEEPENKNLSYRPVY-IDGEKRGYILRTKKNT-KPIFVSPGNNISVDSSL 199
Query: 271 -MIVKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
+++K Y++PEP R+A R ++Y +K +
Sbjct: 200 ELVIKCLNGYKLPEPTRKAHNRLQEYRRKKYA 231
>gi|414155507|ref|ZP_11411819.1| hypothetical protein HMPREF9186_00239 [Streptococcus sp. F0442]
gi|410873480|gb|EKS21415.1| hypothetical protein HMPREF9186_00239 [Streptococcus sp. F0442]
Length = 212
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 17/202 (8%)
Query: 94 LKYIGGVDMSFSKE-DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
++Y+ GVD+++ KE D CIVV++ +T++++ E + VPY+P +LAFRE P+
Sbjct: 16 IQYVAGVDLAYWKEGDKEYGVACIVVINRKTMEVLEEVSYSDEIHVPYLPSYLAFRELPL 75
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+L + + P + M DGNG LHPR G+A+H N TIGV KN +H+DG
Sbjct: 76 ILEAVKLLG-----VIPDLYMFDGNGYLHPRNMGIATHASFYLNKPTIGVAKNYYHIDGA 130
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
++ + + +E +I+ G +G +R+ D +KPI IS G+ I L+T
Sbjct: 131 QYT----VPENREGAYTNIVK----DGEIYGQVLRTHQD-VKPICISCGNWIDLETTREF 181
Query: 273 VK--MTCKYRVPEPIRQADIRS 292
V +T R+P R ADI +
Sbjct: 182 VLEFVTKDSRLPITTRFADIMT 203
>gi|386846010|ref|YP_006264023.1| deoxyribonuclease V [Actinoplanes sp. SE50/110]
gi|359833514|gb|AEV81955.1| deoxyribonuclease V [Actinoplanes sp. SE50/110]
Length = 215
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 108/204 (52%), Gaps = 25/204 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAPVLL 154
+ G+D+++ + G VV+ L T + D +L++ Q PYVPG AFRE P L+
Sbjct: 34 VAGLDVAYDGDR----LGAAVVV-LGTADLAVRDVALIKGQTTFPYVPGLFAFREVPALM 88
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ L+ + R P VL+ DG GL HPR FGLASH+GVL +L + GVGK
Sbjct: 89 AALEKLTVR-----PDVLICDGPGLAHPRRFGLASHLGVLTDLPSFGVGKT-------RL 136
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
G L + ++ +G T G +R T +KP+F+S GH I LD A + +
Sbjct: 137 VGEWAPLGESRGSRSALV----DAGETVGAVLR-TQSGVKPVFVSAGHRIDLDNACSLTL 191
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQ 297
++ +YR+PE R AD RD ++
Sbjct: 192 RLAARYRLPETTRAADRACRDLVR 215
>gi|423661922|ref|ZP_17637091.1| endonuclease V [Bacillus cereus VDM022]
gi|401299187|gb|EJS04786.1| endonuclease V [Bacillus cereus VDM022]
Length = 234
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 132/251 (52%), Gaps = 36/251 (14%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF-SKEDPS 110
+N++T+IQ+EL ++ NL N N +K I G+D+++ +
Sbjct: 12 INEFTDIQNELLSKV--------NLENRFDVNE---------IKNIAGIDLAYWDVNNKM 54
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
CIV++D T ++V + YS + +PY+ GFLAFRE P+ +L+ KK +N P
Sbjct: 55 YGTCCIVMIDYYTKEVVEKVYSYGEISIPYISGFLAFRELPL---ILEAAKKLSNE--PD 109
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
+ M DGNG LH R G+A+H + N TIGV K+ ++ + + ++ + + D
Sbjct: 110 LYMFDGNGYLHYRHMGIATHAAMYLNKPTIGVAKSYLKIENVDATMPKEEVGSY----TD 165
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC---KYRVPEPIRQ 287
I+ G +G +R T +KPIF+S G+ I LDT+ +V M C + R+P P+R
Sbjct: 166 IVI----HGDIYGRVLR-TSYCVKPIFVSCGNWIDLDTSTEVV-MNCINNESRLPIPVRL 219
Query: 288 ADIRSRDYLQK 298
AD+ + +K
Sbjct: 220 ADLETHKMRKK 230
>gi|226314023|ref|YP_002773919.1| endonuclease V [Brevibacillus brevis NBRC 100599]
gi|226096973|dbj|BAH45415.1| probable endonuclease V [Brevibacillus brevis NBRC 100599]
Length = 177
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 101/177 (57%), Gaps = 22/177 (12%)
Query: 116 IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVD 175
+V+LD +LQ+V ++ PY+PG +FRE P L+ +K PQ+++ D
Sbjct: 6 VVILDANSLQVVESVVIQDTVEFPYIPGLFSFRELPPLVRAFKELKTT-----PQLVVCD 60
Query: 176 GNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE--DIIP 233
G G+ HPR FGLASH+GVL ++ TIG GK R L + KE ++ P
Sbjct: 61 GQGIAHPRRFGLASHLGVLFDIPTIGCGKT------------RLLGEYKEPAHQRGAYSP 108
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQAD 289
L+ G G +R+ P+ +KPIF+S+GH ISL TA I K++ KYR+PE RQAD
Sbjct: 109 LI-DQGEIIGGVLRTQPN-IKPIFVSIGHGISLPTACTWITKLSPKYRLPETTRQAD 163
>gi|297559265|ref|YP_003678239.1| deoxyribonuclease V [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296843713|gb|ADH65733.1| Deoxyribonuclease V [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 258
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 12/201 (5%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + G+D+S+S ++ +++ VV+D++TL++V PY+ G FRE+P +
Sbjct: 46 VRLVAGLDVSYSTDNTALSAAA-VVMDVRTLEVVESVAISSEPSFPYISGLFGFRESPPV 104
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHV 209
L L +K P V + DG GL HPR FG+A H+GVL +L +G K++ H V
Sbjct: 105 LEALGQLK-----VTPDVYLCDGFGLAHPRRFGVACHLGVLLDLPVVGSAKSVLFGRHSV 159
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
G ++ + D L G +R T +KP+++SVGH + L+ A
Sbjct: 160 PGEERGSWTPMVAGRSEVVPDSFALADQGKEVLGRVLR-TRRGVKPVYVSVGHRVDLEGA 218
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
++++++ KYRVPEP+R AD
Sbjct: 219 AELVLRLSPKYRVPEPVRHAD 239
>gi|170078188|ref|YP_001734826.1| endonuclease V [Synechococcus sp. PCC 7002]
gi|169885857|gb|ACA99570.1| endonuclease V [Synechococcus sp. PCC 7002]
Length = 226
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 114/242 (47%), Gaps = 47/242 (19%)
Query: 49 QAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKED 108
Q L QW +QD+L TN T I GVD+ F
Sbjct: 21 QTSLGQWIVLQDDLP------------------TNVKT----------IAGVDVGFEARF 52
Query: 109 PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFY 168
SI +VVL L+I+ + PYVPG L+FRE P +L L+ +
Sbjct: 53 -SITRAAVVVLSFPDLEILETAIARCPTSFPYVPGLLSFREVPAILEALEKITH-----L 106
Query: 169 PQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNN 228
P +L DG G HPR GLASH+GVL +L TIGV K+ + G Q + ++
Sbjct: 107 PDLLFCDGQGYAHPRRLGLASHLGVLLDLPTIGVAKS-------RYIGTHQEVPLEKGQ- 158
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQ 287
+PL T G +RS ++P++ISVGH ISL TA+ ++ T KYR+PEP R
Sbjct: 159 --WVPLQ-DHDETIGAVLRSR-TKVRPLYISVGHRISLATALDFVLACTPKYRLPEPTRL 214
Query: 288 AD 289
AD
Sbjct: 215 AD 216
>gi|302555496|ref|ZP_07307838.1| endonuclease V [Streptomyces viridochromogenes DSM 40736]
gi|302473114|gb|EFL36207.1| endonuclease V [Streptomyces viridochromogenes DSM 40736]
Length = 230
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 125/253 (49%), Gaps = 36/253 (14%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDP 109
A Q +QDEL+ R+I ++ P T ++ GVD+++ E
Sbjct: 12 ATEEQARAVQDELRARVILDE---PGPPPGT--------------GHVTGVDVAYDDER- 53
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
+ VVLD +L +V E ++ R+ PYVPG LAFRE P + A P
Sbjct: 54 DVVAAAAVVLDASSLAVVAEATAVGRVSFPYVPGLLAFREIPAV-----LAALDAVACPP 108
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+++ DG GL HPR FGLASH+GVL L TIGV KN + + R A +E
Sbjct: 109 GLVVCDGYGLAHPRRFGLASHLGVLTGLPTIGVAKNPFTFEHDAPAAPRGSTSALLAGSE 168
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQA 288
++ G A+R T D +KP+F+SVGH ++L A + +T +YR+PE R+A
Sbjct: 169 EV-----------GRALR-TRDGVKPVFVSVGHRVTLPNACAHTLALTPRYRLPETTRRA 216
Query: 289 DIRSRDYLQKHQS 301
D R L++ S
Sbjct: 217 DALCRQALRQTYS 229
>gi|357389772|ref|YP_004904612.1| putative endonuclease V [Kitasatospora setae KM-6054]
gi|311896248|dbj|BAJ28656.1| putative endonuclease V [Kitasatospora setae KM-6054]
Length = 229
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 107/210 (50%), Gaps = 25/210 (11%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I GVD+++ E +A V+LD TL++V + ++ R+ PY+PG LAFRE P +L
Sbjct: 40 IAGVDVAYDDERDVVAAAA-VLLDYTTLEVVEQATAVGRVAFPYLPGLLAFRELPAVLDA 98
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN---LHHVDGLT 213
L + + P +++ DG GL HPR GLASH+GV L T+G+ KN H
Sbjct: 99 LARLTR-----TPDLVVCDGYGLAHPRRLGLASHLGVHTGLPTLGIAKNPFTFTHQPPGP 153
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI- 272
H G D PL+ G G A+R+ +KP+F+S GH I L A +
Sbjct: 154 HRG-------------DWTPLLDGPDPV-GRALRTR-QHVKPVFLSTGHRIGLPEATTVT 198
Query: 273 VKMTCKYRVPEPIRQADIRSRDYLQKHQST 302
+ +T YR+PE R+AD R L T
Sbjct: 199 LALTPTYRLPETTRRADALCRQALAATAPT 228
>gi|419953960|ref|ZP_14470102.1| endonuclease V [Pseudomonas stutzeri TS44]
gi|387969335|gb|EIK53618.1| endonuclease V [Pseudomonas stutzeri TS44]
Length = 237
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 113/198 (57%), Gaps = 19/198 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F +E I +V+LD QTL++V + + + +PY+PG L+FRE P +
Sbjct: 40 LRLIAGVDVGF-EEQGQITRAAVVLLDAQTLEVVAQSLTRIPTSMPYIPGLLSFRELPAV 98
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L + + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K + +
Sbjct: 99 LQALQALPE-----VPDLIFSDGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKILTGE--- 150
Query: 214 HSGVRQLLDAKENNNEDIIPLMG-GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-M 271
H +L DA+ +PL +G G +RS + ++P+ +S G+ +SL +A +
Sbjct: 151 HD---ELGDARGAQ----VPLRDRKTGEVLGTVLRSK-ERVRPLIVSPGNRVSLASAPQL 202
Query: 272 IVKMTCKYRVPEPIRQAD 289
+++ +YR+PEP R AD
Sbjct: 203 VMQYVTRYRLPEPTRLAD 220
>gi|452958483|gb|EME63836.1| deoxyribonuclease V [Amycolatopsis decaplanina DSM 44594]
Length = 226
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 116/250 (46%), Gaps = 45/250 (18%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
Q EIQ+ L+ + ED P T T G+D+++ ED +
Sbjct: 14 RQAIEIQETLRGLVDLED----RCPQEIVTVT--------------GLDVAYD-EDSGLI 54
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
V L+ ++V E + ++ PY PG AFRE P LL L RA P +L
Sbjct: 55 AAAAVTLETAGFRVVEERTVVSQVSFPYEPGLFAFRELPPLLDAL-----RALDHVPDLL 109
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHVDGLTHSGVRQLLDAKENNN 228
+ DG+GL HPR FGLA H+GV+ L +IGVGK H G LLD
Sbjct: 110 VCDGHGLAHPRRFGLACHVGVVTGLPSIGVGKTRFVGEHDEPGAERGSRAPLLD------ 163
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQ 287
G G +R T D +KP+++SVGH ISLD A ++++ +R PE R
Sbjct: 164 ---------DGEVVGAVLR-TQDGVKPVYVSVGHKISLDNACRQVLRLCPAFRQPETTRH 213
Query: 288 ADIRSRDYLQ 297
AD +RD L+
Sbjct: 214 ADRLARDALK 223
>gi|148262344|ref|YP_001229050.1| deoxyribonuclease V [Geobacter uraniireducens Rf4]
gi|189029070|sp|A5GD74.1|NFI_GEOUR RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|146395844|gb|ABQ24477.1| Endonuclease V [Geobacter uraniireducens Rf4]
Length = 234
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 29/198 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD +++ E+ V+ DL TL V + + R +PY+PGFL+FRE P L
Sbjct: 38 VAGVDAAYAGEE---IVAVAVLFDLATLTPVARSFVVARPALPYIPGFLSFREGPHLAEA 94
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLT 213
+ + KR P +L+VDG G+ H + FGLA H+GV + IG K+ +V+
Sbjct: 95 VRRLSKR-----PDLLIVDGQGIAHLKRFGLACHLGVELGIPAIGCAKSRLVGEYVEPAA 149
Query: 214 HSGVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-M 271
G R LLD KE G +R T ++P+F+S GH I++D AV M
Sbjct: 150 ERGSRTLLLDRKE---------------AVGAVLR-TRSNVRPVFVSPGHLITIDEAVAM 193
Query: 272 IVKMTCKYRVPEPIRQAD 289
+++ T +R+PEP R+AD
Sbjct: 194 VLRTTAGFRLPEPQREAD 211
>gi|238013666|gb|ACR37868.1| unknown [Zea mays]
gi|413943463|gb|AFW76112.1| hypothetical protein ZEAMMB73_945524 [Zea mays]
Length = 119
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
+W + QD LK +LI ED F W+LP + + E E LKYIGG D+SF KEDPS A
Sbjct: 20 QEWIKTQDMLKSKLILEDEFAWSLP---SVGSGLDEPEWCKLKYIGGTDISFLKEDPSTA 76
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA 150
C +VVL+ TL++V+E+++++RLQVPY+PGFLAFRE+
Sbjct: 77 CAAVVVLNADTLEVVHEEFNVVRLQVPYIPGFLAFRES 114
>gi|409397147|ref|ZP_11248085.1| endonuclease V [Pseudomonas sp. Chol1]
gi|409118307|gb|EKM94707.1| endonuclease V [Pseudomonas sp. Chol1]
Length = 237
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 112/198 (56%), Gaps = 19/198 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F +E I +V+LD QTL++V + + + +PY+PG L+FRE P +
Sbjct: 40 LRLIAGVDVGF-EEQGQITRAAVVLLDAQTLEVVAQSLTRIPTSMPYIPGLLSFRELPAV 98
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K + +
Sbjct: 99 LQALQALPA-----VPDLIFSDGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKILTGE--- 150
Query: 214 HSGVRQLLDAKENNNEDIIPLMG-GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-M 271
H +L DA+ +PL +G G +RS + ++P+ +S G+ +SL +A +
Sbjct: 151 HD---ELGDARGAQ----VPLRDRKTGEVLGTVLRSK-ERVRPLIVSPGNRVSLASAPQL 202
Query: 272 IVKMTCKYRVPEPIRQAD 289
+++ +YR+PEP R AD
Sbjct: 203 VMQYVTRYRLPEPTRLAD 220
>gi|354599538|ref|ZP_09017555.1| Endonuclease V [Brenneria sp. EniD312]
gi|353677473|gb|EHD23506.1| Endonuclease V [Brenneria sp. EniD312]
Length = 224
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 112/219 (51%), Gaps = 34/219 (15%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F ++D +I I VL +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGF-EQDGAITRAVIAVLRYPSLELVEYKIARVGTTMPYIPGFLSFRECPGLLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGL 212
++++ P +L VDG+G+ HPR G+ASH G+L N+ TIGV K+ H
Sbjct: 90 AWGMLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVNVPTIGVAKSRLCGHFAPLS 144
Query: 213 THSGVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
G R+ LLD E G W R P+F++ GH + LD+A++
Sbjct: 145 DQVGSREPLLDKGEQ-----------IGWVWRSKARCN-----PLFVATGHRVGLDSALL 188
Query: 272 IVKMTCK-YRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
V+ + YR+PEP R AD + D QRWQ
Sbjct: 189 WVQRCMRGYRLPEPTRWADAVASD-------RAAFQRWQ 220
>gi|226943431|ref|YP_002798504.1| endonuclease V [Azotobacter vinelandii DJ]
gi|259511729|sp|C1DQ77.1|NFI_AZOVD RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226718358|gb|ACO77529.1| endonuclease V [Azotobacter vinelandii DJ]
Length = 221
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 46/237 (19%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+Q EL R++ D F P+ L I GVD+ F +E I V
Sbjct: 19 LQQELAGRVVLRDDF----PD---------------LGLIAGVDVGF-EEGGGITRAAAV 58
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
+LD TL ++ E + +PY+PG L+FRE P +L L + + P ++ DG
Sbjct: 59 LLDANTLGVLAESLVRIPTSMPYIPGLLSFRELPAVLRALAELPR-----VPDLVFCDGQ 113
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNNEDIIPL 234
G+ HPR G+A+H+GV++ L TIGV K + H + +H G D +PL
Sbjct: 114 GIAHPRRLGIAAHLGVVSGLPTIGVAKKILVGTHAELGSHRG-------------DQVPL 160
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQAD 289
M G G +RS D ++P+ +S GH +SL +A +V M C +YR+PEP R AD
Sbjct: 161 M-YRGEVLGAVLRSK-DRVRPLIVSPGHRVSLASAPRLV-MACVTRYRLPEPTRLAD 214
>gi|455652243|gb|EMF30895.1| endonuclease V [Streptomyces gancidicus BKS 13-15]
Length = 234
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 109/204 (53%), Gaps = 19/204 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
++ GVD+++ E + VVLD TL +V E ++ R+ PYVPG LAFRE P +L+
Sbjct: 41 HVTGVDVAYDDER-DVVAAAAVVLDAATLDVVAEATAVGRISFPYVPGLLAFREIPTVLA 99
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
L+ + + P +++ DG GL HPR FGLASH+GVL L T+GV KN
Sbjct: 100 ALEALPR-----APGLVVCDGYGLAHPRRFGLASHLGVLTGLPTVGVAKNPFTFT----- 149
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVK 274
D PL+ G G A+R T +KP+F+SVGH +SLD A +
Sbjct: 150 -----YDEPAAPRGSTSPLLAGR-EEVGRALR-TRQGVKPVFVSVGHRVSLDNACAHTLA 202
Query: 275 MTCKYRVPEPIRQADIRSRDYLQK 298
+ YR+PE R+AD R L++
Sbjct: 203 LAPAYRLPETTRRADALCRRALRE 226
>gi|256391427|ref|YP_003112991.1| deoxyribonuclease V [Catenulispora acidiphila DSM 44928]
gi|256357653|gb|ACU71150.1| Deoxyribonuclease V [Catenulispora acidiphila DSM 44928]
Length = 223
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 19/204 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+YI G+D++++ + +A G +VVLD TL + +++ ++ PYV G LAFRE P L
Sbjct: 35 FRYIAGLDVAYAIDSSRVA-GAVVVLDADTLAVEDMATAVMDVEFPYVSGLLAFREMPAL 93
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ L + P VL+ DG G+ HPR FGLA H+GVLA +GV K V
Sbjct: 94 ITALGRLS-----VDPDVLVCDGYGIAHPRRFGLACHLGVLAGKPAMGVAKT-AFVGQAA 147
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL-DTAVMI 272
G+++ D++ G G +R+ T KP+F+S GH I+ D +
Sbjct: 148 EPGIQR------GEAADLV----HGGEVVGAVLRTQLST-KPVFVSPGHLITASDATRLA 196
Query: 273 VKMTCKYRVPEPIRQADIRSRDYL 296
+++ KYR+PE R AD SR L
Sbjct: 197 LRLATKYRLPETTRLADQLSRRAL 220
>gi|452746815|ref|ZP_21946625.1| endonuclease V [Pseudomonas stutzeri NF13]
gi|452009292|gb|EME01515.1| endonuclease V [Pseudomonas stutzeri NF13]
Length = 242
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 25/201 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F ++ SI V+LD TL++V + + +PY+PG L+FRE P +
Sbjct: 42 LRLIAGVDVGF-EDGGSITRATAVLLDADTLELVGSSLARIPTNMPYIPGLLSFRELPAV 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHV 209
L L + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K L H
Sbjct: 101 LQALGELPG-----VPDLIFSDGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKLLTGAHDE 155
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
LT +L D K +G G +RS D ++P+ IS G+ +S+ TA
Sbjct: 156 LDLTRGAQVELRDKK-------------TGEVIGCVLRSK-DKVRPLIISPGNRVSIATA 201
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
++++ +YR+PEP R AD
Sbjct: 202 PQLVMRYVTRYRLPEPTRLAD 222
>gi|158333970|ref|YP_001515142.1| endonuclease V [Acaryochloris marina MBIC11017]
gi|158304211|gb|ABW25828.1| endonuclease V [Acaryochloris marina MBIC11017]
Length = 229
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ GVD+ F + + I VL L++ + + PY+PG L+FRE P +
Sbjct: 36 VRFVAGVDVGFENQGKTTRAA-IAVLTWPELKLHETTIARQPTKFPYIPGLLSFREIPTV 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L ++ P +L+ DG GL HPR FG+A H+GVLA+L IGV K+
Sbjct: 95 LAALAQIQT-----TPDLLLCDGQGLAHPRRFGIACHLGVLADLPAIGVAKS-------R 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G + +D N + +I G +R+ P+T KP++IS+GH ISLD+A+ +
Sbjct: 143 LVGKHEPVDQTRGNWQPLI----DKDERIGAVLRTRPNT-KPLYISLGHRISLDSAIEYV 197
Query: 273 VKMTCKYRVPEPIRQAD 289
+ T +YR+PE R AD
Sbjct: 198 MSCTTRYRLPETTRWAD 214
>gi|397604719|gb|EJK58759.1| hypothetical protein THAOC_21086 [Thalassiosira oceanica]
Length = 338
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 153/331 (46%), Gaps = 90/331 (27%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK-------------YIG 98
+ W E+Q+ + ++ ++P S+ + +++ ++ + +G
Sbjct: 11 IEAWKEVQERISSQV--------SIPESSAYSRLSRDSQDERFRDVGPGPSSENRSLRVG 62
Query: 99 GVDMSFS--KEDPSIACGCIVVL---DLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
GVD+ FS ED ++A +V+L L++ ++V+ ++ L + Y+PG+LAFRE +
Sbjct: 63 GVDVGFSLIDEDRAVATYHVVLLYDSTLESAEVVHRAHTWYELTIDYLPGYLAFREIEPI 122
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG-L 212
++L++ + + P V++VDGNGL H R G+A+ +GV +N+ T+GVGK + +DG L
Sbjct: 123 MALIEEQMRVSPEMTPDVILVDGNGLWHQRRAGIATFVGVRSNIPTVGVGKTFYSIDGNL 182
Query: 213 THSGVRQ-----LLD---AKEN-----NNEDII--------------------------- 232
T + V + LLD +K N N+ II
Sbjct: 183 TKNQVHEQLEQALLDWHGSKPNEYHTFQNDRIIVDDRKIGELSSPRIRQTTDTTDQLQVL 242
Query: 233 ------------PLMGGSGSTW-----------GVAMRSTPDTLKPIFISVGHCISLDTA 269
P+ G G T G A S+ + PI+ISVG I+L A
Sbjct: 243 QLLHRSCRGFAVPMCGERGETLAYALVGHGGRGGRASASSRGSKNPIYISVGSGITLQDA 302
Query: 270 VMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
V I ++PEPIR+AD+ R +++ +
Sbjct: 303 VYICAKVSIAKIPEPIREADLYGRRLVRERE 333
>gi|386381914|ref|ZP_10067600.1| endonuclease V [Streptomyces tsukubaensis NRRL18488]
gi|385670634|gb|EIF93691.1| endonuclease V [Streptomyces tsukubaensis NRRL18488]
Length = 232
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 107/204 (52%), Gaps = 24/204 (11%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+++ E + V LD TL +V ++ R+ PYVPG LAFRE P +L+
Sbjct: 42 VTGVDVAYDDER-DLVAAAAVTLDAATLDVVARATAVGRVAFPYVPGLLAFRELPAVLAA 100
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN---LHHVDGLT 213
L+++ P +++ DG GL HPR FGLASH+GVL L TIGV KN H D
Sbjct: 101 LEDLGT-----PPGLVVCDGYGLAHPRRFGLASHLGVLTGLRTIGVAKNPFVFRHDDPGP 155
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-I 272
G PL G G G A+R+ D +KP+++SVGH LD A
Sbjct: 156 QRGA-------------TAPLTDGDGEEVGRALRTRTD-VKPVYVSVGHRTGLDAACAHT 201
Query: 273 VKMTCKYRVPEPIRQADIRSRDYL 296
+ +T +YRVPE R AD RD L
Sbjct: 202 LHLTPRYRVPETTRLADRLCRDAL 225
>gi|390595163|gb|EIN04570.1| hypothetical protein PUNSTDRAFT_122855 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 286
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 118/213 (55%), Gaps = 11/213 (5%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLL---RLQVPYVPGFLAFREA 150
L+ + G+D+SFS + A +V+L Y+ + ++ PY G+LAFR+
Sbjct: 78 LRTVAGIDISFSLTS-NRAVAALVLLPSPPSPSTPPLYTAVHRAEMREPYCAGYLAFRDV 136
Query: 151 PVLLSLLDNMKK-RANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHV 209
P+ +L +K R + + P V +VDG+G+ HPRG G+A+H+G ++ T+GV K +
Sbjct: 137 PLYTALFAMLKADRPDLYPPDVTLVDGHGVWHPRGLGVAAHLGASLDIRTVGVAKTFFAL 196
Query: 210 D--GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
G+ + R++ +++ + G G +G A+R T + K +F+S GH + L+
Sbjct: 197 REVGIDDAVFRRI---DGGGAGEVVEVRGTDGRVYGAAVR-TGGSRKHVFVSEGHGVDLE 252
Query: 268 TAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
+V +V+ YR+PEP+R+AD+ R +++ +
Sbjct: 253 GSVGVVRRCSTYRIPEPVRRADLEGRRVVREER 285
>gi|291009502|ref|ZP_06567475.1| deoxyribonuclease V [Saccharopolyspora erythraea NRRL 2338]
Length = 222
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 109/207 (52%), Gaps = 24/207 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ G+D+++ E + + VLD+ TL +V + + PYVPG AFREAP L
Sbjct: 37 IRTAAGLDVAYRDESDEL-VAAVTVLDVATLSVVDSAVVRGKAEFPYVPGLFAFREAPSL 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDG 211
L L + P VL+ DG GL HPR FGLA H+GVL ++ +IGVGK H+
Sbjct: 96 LQALAELS-----VEPDVLVCDGQGLAHPRRFGLACHLGVLTDVPSIGVGKTAMGHYEPP 150
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV- 270
G L +++++ G A+R T +KP+F+SVGH +LD A
Sbjct: 151 GEERGAWTPL----RLDDEVV----------GRALR-TQRGVKPVFVSVGHRFTLDAACD 195
Query: 271 MIVKMTCKYRVPEPIRQADIRSRDYLQ 297
+++++ KYR+PE R AD R L+
Sbjct: 196 LVLRLAPKYRLPETTRTADHLGRSALR 222
>gi|325680159|ref|ZP_08159724.1| deoxyribonuclease V [Ruminococcus albus 8]
gi|324108108|gb|EGC02359.1| deoxyribonuclease V [Ruminococcus albus 8]
Length = 231
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 128/246 (52%), Gaps = 33/246 (13%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKE-D 108
A+ ++ +IQ++L++++ ED F+ + LK + GVD+++ +E D
Sbjct: 3 AEEEKFAQIQNDLRQKISLEDSFSADA-----------------LKTVAGVDLAYWQEGD 45
Query: 109 PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFY 168
A CIVV D + +++ + + VPY+PG+LAFRE P++L + ++
Sbjct: 46 TERAVCCIVVTDAASGEVIEKKQCDGMIDVPYIPGYLAFRELPLVLKTVGLLENE----- 100
Query: 169 PQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNN 228
P + + DGNG LHPR G+A+H ++ +G+ K VD T DA +
Sbjct: 101 PDLFIFDGNGYLHPRHMGIATHAALVMGRPAMGIAKTYFRVDKKTDY-TEPAEDA--GSY 157
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VKMTCK-YRVPEPIR 286
DII G +G A+R T +KP+F+S G ISLDTA I +++T K +P P R
Sbjct: 158 TDIII----DGEVYGRALR-THKGVKPVFVSAGSGISLDTACDISLRLTSKESHIPIPTR 212
Query: 287 QADIRS 292
AD+ +
Sbjct: 213 LADLET 218
>gi|421618236|ref|ZP_16059214.1| endonuclease V [Pseudomonas stutzeri KOS6]
gi|409779790|gb|EKN59441.1| endonuclease V [Pseudomonas stutzeri KOS6]
Length = 242
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 33/205 (16%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F +E SI V+LD +TL++V + + +PYVPG L+FRE P +
Sbjct: 42 LRLIAGVDVGF-EEGGSITRAAAVLLDAETLELVGSSLARIPTNMPYVPGLLSFRELPAV 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K L LT
Sbjct: 101 LQALAELPA-----MPDLIFADGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKL-----LT 150
Query: 214 HSGVRQLLDAKENNNEDIIPLMGG--------SGSTWGVAMRSTPDTLKPIFISVGHCIS 265
++++ P G +G G +RS D ++P+ +S G+ +S
Sbjct: 151 ------------GEHDELDPARGAQVALRDRKTGEVIGCVLRSK-DRVRPLIVSPGNRVS 197
Query: 266 LDTA-VMIVKMTCKYRVPEPIRQAD 289
+ TA +++++ +YR+PEP R AD
Sbjct: 198 IATAPLLVMRYVTRYRLPEPTRLAD 222
>gi|209965970|ref|YP_002298885.1| endonuclease V [Rhodospirillum centenum SW]
gi|254767277|sp|B6IUZ1.1|NFI_RHOCS RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|209959436|gb|ACJ00073.1| endonuclease V, putative [Rhodospirillum centenum SW]
Length = 240
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 18/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIAC-GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
++ + GVD+S DPS +V+LD T +++ ++ +PYVPGFL FRE P
Sbjct: 39 VRTVAGVDVSQFGRDPSGRVFAAVVLLDAATREVLEVGTAMRVAPIPYVPGFLGFREVPA 98
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
LL+ + +R P +++VDG+G HPRG G+A+H+GVL ++ IGV K++ L
Sbjct: 99 LLAAFGALSRR-----PDLVLVDGHGTSHPRGLGIAAHLGVLLDIPAIGVAKSI-----L 148
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-M 271
+ +L + + +PL+ G T +RS D + P+++S GH I + AV
Sbjct: 149 VGAPAGELGGTRGSR----VPLV-WQGRTIATVLRSK-DRVAPLYVSTGHRIDEEAAVDW 202
Query: 272 IVKMTCKYRVPEPIRQA 288
+++ +YR+PEP R+A
Sbjct: 203 TLRLGGRYRLPEPTRRA 219
>gi|300714860|ref|YP_003739663.1| endonuclease V [Erwinia billingiae Eb661]
gi|299060696|emb|CAX57803.1| Endonuclease V [Erwinia billingiae Eb661]
Length = 222
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 109/196 (55%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ I +V+L+ +LQ+V + + +PY+PG+L+FRE P L+
Sbjct: 29 RYIGGADVGF-EQGGEITRAALVILEYPSLQLVEHRVARIATTMPYIPGYLSFREYPALV 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++ R P +LMVDG G+ HPR G+ASH G+L ++ T+GV K+
Sbjct: 88 AAWQQLEHR-----PDLLMVDGQGIAHPRRLGVASHFGLLVDVPTLGVAKS-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L + ++ PLM G G +RS P+FIS GH +S TA+ +V+
Sbjct: 136 CGTFEPLADEPGASQ---PLM-DKGEQIGFVLRSK-IRCNPLFISPGHRMSPATALSLVE 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 SCLKGYRLPEPTRWAD 206
>gi|282164128|ref|YP_003356513.1| endonuclease V [Methanocella paludicola SANAE]
gi|282156442|dbj|BAI61530.1| endonuclease V [Methanocella paludicola SANAE]
Length = 219
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 113/212 (53%), Gaps = 33/212 (15%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+K +GGVD S+ +D I G +VVLD TL+ +Y + + RL PY+PG LA+REA +
Sbjct: 26 IKRVGGVDCSYL-DDKFIIAG-LVVLDYGTLKPIYRTFDIQRLTFPYIPGLLAYREAEAM 83
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ ++ K R P ++MVDG G HPR G+A+HIG+ ++ IGVGK+
Sbjct: 84 MGVIKKAKVR-----PDLIMVDGFGTNHPRRCGIATHIGIKLDVPAIGVGKSFL------ 132
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
E + II G G +R+ KP+++S GH ISL TAV +V
Sbjct: 133 ---------CGEVQGQRIIQ----DGEETGRLVRAISGQ-KPVYVSPGHKISLKTAVKVV 178
Query: 274 K-MTCKYRVPEPIRQA-----DIRSRDYLQKH 299
K +R PEP RQA I++R L+++
Sbjct: 179 KHCMAGHRQPEPTRQAHEYVTSIKNRSLLREN 210
>gi|269137539|ref|YP_003294239.1| hypothetical protein ETAE_0181 [Edwardsiella tarda EIB202]
gi|387866300|ref|YP_005697769.1| Endonuclease V [Edwardsiella tarda FL6-60]
gi|267983199|gb|ACY83028.1| hypothetical protein ETAE_0181 [Edwardsiella tarda EIB202]
gi|304557613|gb|ADM40277.1| Endonuclease V [Edwardsiella tarda FL6-60]
Length = 228
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++D ++ + VL L +V + + Q+PY+PGFL+FRE P LL
Sbjct: 29 IAGADVGF-EQDGAVTRAALAVLCYPELTLVEYQVARIETQMPYIPGFLSFREYPALLQS 87
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
++ R PQ++MVDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 88 WGQLRHR-----PQLVMVDGHGIAHPRRLGIASHFGLLVDVPTIGVAKR-------RLCG 135
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
LD + + LM G G G +RS P+FIS GH +S D+A+ V+
Sbjct: 136 QFAPLDETPGST---VALMDG-GEQLGWVLRSKARC-NPLFISGGHRVSTDSALAWVQRC 190
Query: 277 CK-YRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 191 LRGYRLPEPTRWAD 204
>gi|423469480|ref|ZP_17446224.1| endonuclease V [Bacillus cereus BAG6O-2]
gi|402439218|gb|EJV71226.1| endonuclease V [Bacillus cereus BAG6O-2]
Length = 229
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 120/220 (54%), Gaps = 21/220 (9%)
Query: 76 LPNSTTTNTSTKEEEEVLLKYIGGVDMSFSK-EDPSIACGCIVVLDLQTLQIVYEDYSLL 134
LP NT EE ++++ GVD+++ + + CIVV+D T +++ + YS
Sbjct: 21 LPKVKLKNTFQLEE----IRFVAGVDLAYWEVSGETYGTCCIVVIDFHTHEVIEKVYSYG 76
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
+ +PY+ GFLAFRE P++ + + ++ P + M DGNG LH R G+A+H
Sbjct: 77 EITIPYISGFLAFRELPLIKAAAKKLSEQ-----PDIYMFDGNGYLHYRHMGIATHASFY 131
Query: 195 ANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLK 254
N TIGV K+ ++ + + + + ++ + DII + +G A+R+T ++K
Sbjct: 132 LNRPTIGVAKSYLKINNVDFT----MPEDQKGSYTDIII----NNEIYGRALRTT-QSVK 182
Query: 255 PIFISVGHCISLDTAVMIVK--MTCKYRVPEPIRQADIRS 292
PIFIS G+ I L+T IV + + R+P P+R AD+ +
Sbjct: 183 PIFISCGNWIDLETCTEIVMRFINKESRLPIPVRLADLET 222
>gi|238760267|ref|ZP_04621411.1| Endonuclease V [Yersinia aldovae ATCC 35236]
gi|238701531|gb|EEP94104.1| Endonuclease V [Yersinia aldovae ATCC 35236]
Length = 234
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 116/222 (52%), Gaps = 38/222 (17%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRL--QVPYVPGFLAFREAP 151
+++I G D+ F ++ + + VL +L++V +Y L R+ +PY+PG L+FRE P
Sbjct: 29 VRFIAGADVGFEQQG-EVTRAAVAVLRYPSLELV--EYQLARVATSLPYIPGLLSFREYP 85
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHV 209
LL+ + +++R PQ++ VDG G+ HPR FG+ASH G+L ++ TIGV K+ H
Sbjct: 86 ALLAAWEQLQQR-----PQLVFVDGQGIAHPRRFGVASHFGLLVDVPTIGVAKSRLCGHF 140
Query: 210 D--GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
G + ++ L+DA E G W R P+FIS GH +S+
Sbjct: 141 QPLGSENGALQPLVDADEQ-----------LGWVWRSKKRCN-----PLFISPGHRVSVS 184
Query: 268 TAVMIVKM-TCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
+A+ V+ YR+PEP R AD + + Q QRW
Sbjct: 185 SALAWVQACMAGYRLPEPTRWADAIASNRPQ-------FQRW 219
>gi|37524499|ref|NP_927843.1| endonuclease V [Photorhabdus luminescens subsp. laumondii TTO1]
gi|56404393|sp|Q7N959.1|NFI_PHOLL RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|36783923|emb|CAE12785.1| endonuclease V [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 222
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
K I G D+ F ++ +I I VL L++V + + +PY+PG L+FRE P L+
Sbjct: 28 KLIAGADVGFERQG-AITRAAIAVLSYPALELVEYQIARIETTLPYIPGLLSFREYPALM 86
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ +K + P ++MVDG+G+ HPR G+ASH G+LAN+ TIGV K
Sbjct: 87 AAWQLLK-----YKPDLVMVDGHGIAHPRRLGVASHFGLLANVPTIGVAKR-------RL 134
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G +LL + + + ++ G W R P++IS GH ISLD+A++ V+
Sbjct: 135 CGESELLGEQPGSCQPLLDKEEQIGWVWRSKKRCN-----PLYISTGHRISLDSALLWVE 189
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PE R AD
Sbjct: 190 RCMKGYRLPETTRWAD 205
>gi|260891968|ref|YP_003238065.1| Deoxyribonuclease V [Ammonifex degensii KC4]
gi|260864109|gb|ACX51215.1| Deoxyribonuclease V [Ammonifex degensii KC4]
Length = 226
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 106/200 (53%), Gaps = 19/200 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ + G D+SFS+ + +VVL + ++ E + L PY+PG LAFRE P L
Sbjct: 38 LRLVAGCDVSFSQAR-GMLYAAVVVLKVPDFEVAEESTACLPATFPYIPGLLAFREIPAL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
LS L+ +K P +++ DG G+ HPRG G+ASH+GVL +L TIGV K T
Sbjct: 97 LSALEKIKS-----TPDLILCDGQGIAHPRGMGIASHLGVLFDLPTIGVAK--------T 143
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI- 272
R E + + G G +R T +KP+F+S GH +S+D A I
Sbjct: 144 CLVGRWKTPGPERGS---FSYLRYRGRVVGTVLR-TRTGVKPVFVSPGHRVSVDLAREIA 199
Query: 273 VKMTCKYRVPEPIRQADIRS 292
+ + +YR+PEP+R A + S
Sbjct: 200 LYLAPRYRLPEPLRLAHLLS 219
>gi|182434791|ref|YP_001822510.1| endonuclease [Streptomyces griseus subsp. griseus NBRC 13350]
gi|178463307|dbj|BAG17827.1| putative endonuclease [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 230
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TL+ V E ++ R+ PYVPG LAFRE P L L+ + P +++ DG GL HP
Sbjct: 68 TLETVDEATAVGRITFPYVPGLLAFREIPTALEALEGLS-----VDPGLVICDGYGLAHP 122
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLASH+GVL L IGVGKN +A D PL+ G
Sbjct: 123 RRFGLASHLGVLTGLPVIGVGKNPFTFT----------YEAPGPRRGDFSPLLDGE-EVV 171
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQK 298
G A+R+ +T P+F+SVGH ISLD A +++ ++R PE R+AD R L++
Sbjct: 172 GRALRTQENT-NPVFVSVGHRISLDNACAHTLRLAGRFRQPESTRRADALCRQTLRE 227
>gi|418469121|ref|ZP_13039792.1| endonuclease [Streptomyces coelicoflavus ZG0656]
gi|371550279|gb|EHN77755.1| endonuclease [Streptomyces coelicoflavus ZG0656]
Length = 230
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 122/241 (50%), Gaps = 36/241 (14%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QDEL+ R++ ++ P T + GVD+++ E + V
Sbjct: 22 VQDELRARVVLDE---PGPPPGT--------------GRVTGVDVAYDDER-DVVAAAAV 63
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VLD TL +V E ++ R+ PYVPG LAFRE P + + L+ + P +++ DG
Sbjct: 64 VLDAATLAVVAEATAVGRISFPYVPGLLAFREIPTVRAALEALP-----CPPGLVVCDGY 118
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
GL HPR FGLASH+GVL L TIGV KN TH D + PL+ G
Sbjct: 119 GLAHPRRFGLASHLGVLTGLPTIGVAKNPFT---FTH-------DDPDAPRGSTSPLLAG 168
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYL 296
+ G A+R T D +KP+F+SVGH +SL A + + YR+PE R+AD R L
Sbjct: 169 A-EEVGRALR-TRDGVKPVFVSVGHRVSLSNACAHTLALAPAYRLPETTRRADSLCRAAL 226
Query: 297 Q 297
+
Sbjct: 227 R 227
>gi|302522920|ref|ZP_07275262.1| endonuclease V [Streptomyces sp. SPB78]
gi|318060523|ref|ZP_07979246.1| endonuclease V [Streptomyces sp. SA3_actG]
gi|318080072|ref|ZP_07987404.1| endonuclease V [Streptomyces sp. SA3_actF]
gi|302431815|gb|EFL03631.1| endonuclease V [Streptomyces sp. SPB78]
Length = 230
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 104/205 (50%), Gaps = 27/205 (13%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD+++ +A VVLD ++ ++ R+ PYVPG LAFRE P +L+ LD
Sbjct: 44 GVDVAYDDARDLVAAAA-VVLDPGGRTVLGRATAVGRVAFPYVPGLLAFRELPAVLAALD 102
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN----LHHVDGLTH 214
+ P V++ DG G+ HPR FGLA+H+GVL L GV KN + G
Sbjct: 103 RLP-----VAPGVVVCDGYGVAHPRRFGLAAHLGVLTGLPVFGVAKNPFLFTYEAPGEER 157
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IV 273
LLD E G A+R T +KP+++S GH ++LDTA +
Sbjct: 158 GARAPLLDGAEE---------------VGAALR-TRTGVKPVYVSAGHRVTLDTACAHTL 201
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQK 298
+T +YR+PE R+AD R L++
Sbjct: 202 ALTPRYRLPETTRRADALCRAALKE 226
>gi|345297415|ref|YP_004826773.1| endonuclease V [Enterobacter asburiae LF7a]
gi|345091352|gb|AEN62988.1| Endonuclease V [Enterobacter asburiae LF7a]
Length = 223
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ + +VVL +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 QYIGGADVGF-EQGGEVTRAAMVVLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWELLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ + PLM G RS P+FI+ GH +SLD+A+ V+
Sbjct: 136 CGAFEPLSAEAGA---LGPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSLDSALAWVQ 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 RCTKGYRLPEPTRWAD 206
>gi|333023240|ref|ZP_08451304.1| putative endonuclease V [Streptomyces sp. Tu6071]
gi|332743092|gb|EGJ73533.1| putative endonuclease V [Streptomyces sp. Tu6071]
Length = 230
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 105/205 (51%), Gaps = 27/205 (13%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD+++ +A VVLD ++ + ++ R+ PYVPG LAFRE P +L+ LD
Sbjct: 44 GVDVAYDDARDLVAAAA-VVLDPGGRTVLGQATAVGRVAFPYVPGLLAFRELPAVLAALD 102
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN----LHHVDGLTH 214
+ P V++ DG G+ HPR FGLA+H+GVL L GV KN + G
Sbjct: 103 RLP-----VAPGVVVCDGYGVAHPRRFGLAAHLGVLTGLPVFGVAKNPFLFTYAAPGEER 157
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IV 273
LLD E G A+R T +KP+++S GH ++LDTA +
Sbjct: 158 GARAPLLDGAEE---------------VGAALR-TRTGVKPVYVSAGHRVTLDTACAHTL 201
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQK 298
+T +YR+PE R+AD R L++
Sbjct: 202 ALTPRYRLPETTRRADALCRAALKE 226
>gi|418293846|ref|ZP_12905748.1| endonuclease V [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379065231|gb|EHY77974.1| endonuclease V [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 246
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 106/201 (52%), Gaps = 25/201 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F +E SI V+LD TL++V + + +PY+PG L+FRE P +
Sbjct: 42 LRLIAGVDVGF-EEGGSITRAAAVLLDADTLELVGSSLARIPTNMPYIPGLLSFRELPAV 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHV 209
L L + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K L H
Sbjct: 101 LQALGELPA-----VPDLIFSDGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKLLTGEHDE 155
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
L +L D K +G G +RS D ++P+ IS G+ +S+ TA
Sbjct: 156 LDLMRGAQVELRDKK-------------TGEVIGCVLRSK-DKVRPLIISPGNRVSIATA 201
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
++++ +YR+PEP R AD
Sbjct: 202 PQLVMRYLTRYRLPEPTRLAD 222
>gi|365863661|ref|ZP_09403370.1| putative endonuclease [Streptomyces sp. W007]
gi|364006897|gb|EHM27928.1| putative endonuclease [Streptomyces sp. W007]
Length = 230
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TL+ V E ++ R+ PYVPG LAFRE P L L+ + P +++ DG GL HP
Sbjct: 68 TLETVDEATAVGRITFPYVPGLLAFREIPTALEALEGLS-----VDPGLVICDGYGLAHP 122
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLASH+GVL L IGVGKN +A D PL+ G
Sbjct: 123 RRFGLASHLGVLTGLPVIGVGKNPFTF----------TYEAPGPRRGDFSPLLDGD-EVV 171
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQK 298
G A+R+ +T P+F+SVGH ISLD A +++ ++R PE R+AD R L++
Sbjct: 172 GRALRTQENT-NPVFVSVGHRISLDNACAHTLRLAGRFRQPESTRRADALCRQTLRE 227
>gi|300115391|ref|YP_003761966.1| deoxyribonuclease V [Nitrosococcus watsonii C-113]
gi|299541328|gb|ADJ29645.1| Deoxyribonuclease V [Nitrosococcus watsonii C-113]
Length = 224
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 26/225 (11%)
Query: 73 TWNLPNSTTTNTSTKEEEEVL-------LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQ 125
+WNL + +V+ ++++ GVD+ F +E I +VVL L L
Sbjct: 7 SWNLSPKEAVALQRRLAGQVITEDRLGRVRFVAGVDVGF-EEQGKITRAAVVVLQLADLS 65
Query: 126 IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGF 185
+V + + PY+PG L+FRE P +L+ L+ + P +L+ DG G+ HPR F
Sbjct: 66 LVEQVVARRPTHFPYIPGLLSFRECPTVLAALEKLT-----VTPNLLLCDGQGIAHPRRF 120
Query: 186 GLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVA 245
G+A H+GVL L +IGV K + G H + PL G T G
Sbjct: 121 GIACHLGVLTGLPSIGVAKT--RLTG-QHG-------PAPDERGGWTPL-ADKGETIGAV 169
Query: 246 MRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQAD 289
+R T ++P+FIS+GH ISL TA+ ++ T +YR+PE R AD
Sbjct: 170 LR-TRLKVRPVFISIGHRISLLTAIQYVMACTTRYRLPETTRLAD 213
>gi|320451082|ref|YP_004203178.1| endonuclease V [Thermus scotoductus SA-01]
gi|320151251|gb|ADW22629.1| endonuclease V [Thermus scotoductus SA-01]
Length = 225
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 111/217 (51%), Gaps = 39/217 (17%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI---VYEDYSLLRLQVPYVPGFLAFREA 150
+K I +D S + P +A + L+ L + V + +L PY+PGFL+FREA
Sbjct: 33 VKRIAALDASHKRGKPLVAVAVLYHLEKGPLAVGVGVVPEEALF----PYIPGFLSFREA 88
Query: 151 PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
P L L+ + + P+ L+VDG G+ HPRG G+ASH+GV +L +IGV K+L +
Sbjct: 89 PAYLQALEALPEP-----PEALLVDGQGIAHPRGLGIASHLGVHLDLPSIGVAKSLLY-- 141
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGS--------GSTWGVAMRSTPDTLKPIFISVGH 262
E +PL GS G G A RS +KP+FIS GH
Sbjct: 142 ---------------GRLEAPLPLEAGSAVRILSPEGRPLGYAYRSR-KGVKPLFISPGH 185
Query: 263 CISLDTAVMIVK-MTCKYRVPEPIRQADIRSRDYLQK 298
+ L+ A+ VK + ++R+PEP+R A + + L++
Sbjct: 186 RVGLEEALAFVKHLPTRFRLPEPLRLAHLEAGKALRR 222
>gi|408682124|ref|YP_006881951.1| Endonuclease V [Streptomyces venezuelae ATCC 10712]
gi|328886453|emb|CCA59692.1| Endonuclease V [Streptomyces venezuelae ATCC 10712]
Length = 231
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 97/181 (53%), Gaps = 18/181 (9%)
Query: 122 QTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLH 181
+TL++V E ++ R+ PYVPG LAFRE P +L+ LD + P +L+ DG GL H
Sbjct: 66 RTLEVVEEATAVGRVSFPYVPGLLAFREIPTVLAALDRLSAD-----PGLLVCDGYGLAH 120
Query: 182 PRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGST 241
PR FGLASH+GVL ++GV KN + D PL+ G
Sbjct: 121 PRRFGLASHLGVLTGRPSVGVAKNPFTFT----------YEQPGPARGDFAPLL-AEGEE 169
Query: 242 WGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
G A+R T +KP+F+SVGH +SL A + ++ +YR+PE R AD R L++ Q
Sbjct: 170 VGRALR-TQAGVKPVFVSVGHRVSLAHACAHTLHLSPRYRIPETTRHADSLCRRALKEAQ 228
Query: 301 S 301
Sbjct: 229 G 229
>gi|326775308|ref|ZP_08234573.1| Deoxyribonuclease V [Streptomyces griseus XylebKG-1]
gi|326655641|gb|EGE40487.1| Deoxyribonuclease V [Streptomyces griseus XylebKG-1]
Length = 230
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 95/177 (53%), Gaps = 18/177 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TL+ V E ++ R+ PYVPG LAFRE P L L+ + P +++ DG GL HP
Sbjct: 68 TLETVDEATAVGRITFPYVPGLLAFREIPTALEALEGLS-----VDPGLVICDGYGLAHP 122
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLASH+GVL L IGVGKN +A D PL+ G
Sbjct: 123 RRFGLASHLGVLTGLPVIGVGKNPFTFT----------YEAPGPRRGDFSPLLDGE-EVV 171
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQK 298
G A+R+ +T P+F+SVGH ISLD A +++ ++R PE R+AD R L++
Sbjct: 172 GRALRTQENT-NPVFVSVGHRISLDNACAHTLRLARRFRQPESTRRADALCRQTLRE 227
>gi|217077944|ref|YP_002335662.1| endonuclease V [Thermosipho africanus TCF52B]
gi|419760535|ref|ZP_14286810.1| endonuclease V [Thermosipho africanus H17ap60334]
gi|217037799|gb|ACJ76321.1| endonuclease V [Thermosipho africanus TCF52B]
gi|407514373|gb|EKF49200.1| endonuclease V [Thermosipho africanus H17ap60334]
Length = 221
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 30/212 (14%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
Y+ GVD+S+ + IVV+D +V Y + +++ PY+PG LAFRE PV L
Sbjct: 34 YVAGVDLSYVNNK---SLAVIVVID-SKFNVVEITYHIDKIKYPYIPGLLAFREGPVFLK 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+K + ++M DG+G+ HPR G+ASH+G+ TIG+ K
Sbjct: 90 AWQKIKTNVD-----LVMFDGHGIAHPRKLGIASHMGLWIKKPTIGIAK----------- 133
Query: 216 GVRQLLDAKE--NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
++L+ + +N + + +G G+ ++S +T KPIFIS GH I LD+++ IV
Sbjct: 134 --KKLVGTYDEPSNTKFSSSYLWYNGEKIGIVLKSRENT-KPIFISPGHLIDLDSSLNIV 190
Query: 274 K-MTCKYRVPEPIRQADIRSRDYLQKHQSTCL 304
K KY++PEP R A I Y QK ++ +
Sbjct: 191 KKYITKYKLPEPTRLAHI----YTQKLKNKII 218
>gi|226192789|pdb|3GOC|A Chain A, Crystal Structure Of The Endonuclease V (Sav1684) From
Streptomyces Avermitilis. Northeast Structural Genomics
Consortium Target Svr196
gi|226192790|pdb|3GOC|B Chain B, Crystal Structure Of The Endonuclease V (Sav1684) From
Streptomyces Avermitilis. Northeast Structural Genomics
Consortium Target Svr196
Length = 237
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 124/245 (50%), Gaps = 36/245 (14%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QDEL+ R+I ++ P T T GVD+++ E + V
Sbjct: 20 VQDELRGRVILDE---PGPPPGTGRVT--------------GVDVAYDDER-DVVVAAAV 61
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VLD TL +V E ++ + PYVPG LAFRE P +L+ LD + P +++ DG
Sbjct: 62 VLDAATLDVVAEATAVGEVSFPYVPGLLAFREIPTVLAALDALP-----CPPGLIVCDGY 116
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
G+ HPR FGLASH+GVL L TIGV KN T S + PL+ G
Sbjct: 117 GVAHPRRFGLASHLGVLTGLPTIGVAKNP-----FTFS-----YEDPGAPRGSAAPLLAG 166
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYL 296
+ G A+R T +KP+F+SVGH + LD A + +T KYR+PE R+AD R L
Sbjct: 167 ADEV-GRALR-TQSGVKPVFVSVGHRVDLDHACAHTLALTPKYRIPETTRRADSLCRRAL 224
Query: 297 QKHQS 301
++ +
Sbjct: 225 KEATA 229
>gi|453052096|gb|EME99586.1| endonuclease V [Streptomyces mobaraensis NBRC 13819 = DSM 40847]
Length = 235
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 108/207 (52%), Gaps = 27/207 (13%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD+++ E + V LD +TL++V E ++ R+ PYVPG LAFRE P +L+ LD
Sbjct: 51 GVDVAYDDEH-DLVAAAAVALDTRTLRVVAEATAVGRVAFPYVPGLLAFREIPTVLAALD 109
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN----LHHVDGLTH 214
+ P +++ DG GL HPR FGLA+H+GVL L TIGV KN H G
Sbjct: 110 RLPA-----SPDLVVCDGYGLAHPRRFGLAAHLGVLTGLPTIGVAKNPFTFRHAPPGPAR 164
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IV 273
LLD E G A+R T + +KP+++SVGH ++LD A +
Sbjct: 165 GDTAPLLDGDEE---------------VGRALR-TREGVKPVYVSVGHRVNLDRACAHTL 208
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQKHQ 300
+ YR+PE R AD R L + +
Sbjct: 209 GLARAYRLPETTRAADALCRRALAEAR 235
>gi|29828226|ref|NP_822860.1| endonuclease V [Streptomyces avermitilis MA-4680]
gi|56404406|sp|Q82MH6.1|NFI_STRAW RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|29605328|dbj|BAC69395.1| putative endonuclease V [Streptomyces avermitilis MA-4680]
Length = 229
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 124/245 (50%), Gaps = 36/245 (14%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QDEL+ R+I ++ P T T GVD+++ E + V
Sbjct: 20 VQDELRGRVILDE---PGPPPGTGRVT--------------GVDVAYDDER-DVVVAAAV 61
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VLD TL +V E ++ + PYVPG LAFRE P +L+ LD + P +++ DG
Sbjct: 62 VLDAATLDVVAEATAVGEVSFPYVPGLLAFREIPTVLAALDALP-----CPPGLIVCDGY 116
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
G+ HPR FGLASH+GVL L TIGV KN T S + PL+ G
Sbjct: 117 GVAHPRRFGLASHLGVLTGLPTIGVAKNP-----FTFS-----YEDPGAPRGSAAPLLAG 166
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYL 296
+ G A+R T +KP+F+SVGH + LD A + +T KYR+PE R+AD R L
Sbjct: 167 ADEV-GRALR-TQSGVKPVFVSVGHRVDLDHACAHTLALTPKYRIPETTRRADSLCRRAL 224
Query: 297 QKHQS 301
++ +
Sbjct: 225 KEATA 229
>gi|406981045|gb|EKE02566.1| hypothetical protein ACD_20C00358G0003 [uncultured bacterium]
Length = 222
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 41/240 (17%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMS---FSKEDP 109
+ ++Q EL ++I ++ F + YI GVD+S F ++
Sbjct: 6 KEAIKLQKELADKIIEQNMFEK-------------------IDYIAGVDVSQPAFMQQGI 46
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
A CI L L++V + + PY+PG LAFREAPV+++ L+ +K + P
Sbjct: 47 LYAAVCI--LSFPELELVEQVHHFQETDFPYIPGLLAFREAPVIINALEKVKTK-----P 99
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+++ DG+G+ HPR G+ASHIGVL TIG K++ L ++L K +
Sbjct: 100 DIIIADGHGISHPRKLGIASHIGVLTGHITIGCAKSI-----LVGKPEKELPPKKGS--- 151
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-KMTCKYRVPEPIRQA 288
+PL+ G +R T D + P+++S+G+ I+LD A IV T KYR+PEP R A
Sbjct: 152 -YVPLI-YHNKIIGNVLR-TKDKVNPVYVSIGNKITLDKATEIVLACTTKYRLPEPTRLA 208
>gi|339495674|ref|YP_004715967.1| endonuclease V [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|338803046|gb|AEJ06878.1| endonuclease V [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 241
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 23/200 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F ++ ++ V+LD TL++V + + +PYVPG L+FRE P +
Sbjct: 42 LRLIAGVDVGF-EDGGTVTRAAAVLLDADTLELVGSSLARIPTNMPYVPGLLSFRELPAV 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVD 210
L L + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K L H +
Sbjct: 101 LQALAELPA-----VPDLIFSDGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKLLTGEHDE 155
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G R L K+ +G G +RS D ++P+ IS G+ +SL TA
Sbjct: 156 LDLQRGARVALRDKK------------TGDVIGCVLRSK-DKVRPLIISPGNRVSLATAP 202
Query: 271 -MIVKMTCKYRVPEPIRQAD 289
++++ +YR+PEP R AD
Sbjct: 203 ELVMRYVTRYRLPEPTRLAD 222
>gi|429198938|ref|ZP_19190721.1| deoxyribonuclease V [Streptomyces ipomoeae 91-03]
gi|428665307|gb|EKX64547.1| deoxyribonuclease V [Streptomyces ipomoeae 91-03]
Length = 210
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 124/241 (51%), Gaps = 36/241 (14%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QDEL+ +++ ++ T P + ++ GVD+++ E + V
Sbjct: 1 MQDELRGKVVRDE--TGPPPGT---------------GHVTGVDVAYDDER-DVVAAAAV 42
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VLD TL +V E ++ ++ PYVPG LAFRE P +L+ LD + P +++ DG
Sbjct: 43 VLDAATLDVVAEATAIGQVSFPYVPGLLAFREIPTVLAALDALP-----CDPGLVVCDGY 97
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
GL HPR FGLASH+GVL L TIGV KN D + PL+ G
Sbjct: 98 GLAHPRRFGLASHLGVLTGLPTIGVAKNPFTF----------TYDDPDAPRGSASPLLSG 147
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYL 296
+ G A+R T +KP+F+SVGH +SLD A + +T YR+PE R+AD R L
Sbjct: 148 T-EEVGRALR-TRAGVKPVFVSVGHRVSLDNACAHTLALTPDYRLPESTRRADALCRRAL 205
Query: 297 Q 297
+
Sbjct: 206 R 206
>gi|238918148|ref|YP_002931662.1| endonuclease V [Edwardsiella ictaluri 93-146]
gi|238867716|gb|ACR67427.1| endonuclease V [Edwardsiella ictaluri 93-146]
Length = 228
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F ++D + + VL L +V + + Q+PY+PGFL+FRE P LL
Sbjct: 28 FIAGADVGF-EQDGLVTRAALAVLRYPELTLVEYQVARIETQMPYIPGFLSFREYPALLQ 86
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ R PQ++MVDG+G+ HPR G+ASH G+LA++ TIG+ K
Sbjct: 87 AWGLLQHR-----PQLVMVDGHGIAHPRRLGIASHFGLLADVPTIGIAKR-------RLC 134
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G LD + + LM G+ G +RS P+FIS GH +S D+A+ V+
Sbjct: 135 GQSAPLDETPGSA---VALMDGTEQL-GWVLRSKARC-HPLFISGGHRVSTDSALTWVQR 189
Query: 276 TCK-YRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 190 CLRGYRLPEPTRWAD 204
>gi|150019182|ref|YP_001311436.1| deoxyribonuclease V [Clostridium beijerinckii NCIMB 8052]
gi|149905647|gb|ABR36480.1| Deoxyribonuclease V [Clostridium beijerinckii NCIMB 8052]
Length = 236
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 125/248 (50%), Gaps = 34/248 (13%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF-SKEDPSIA 112
+++ IQ +L K +I ++ F NS T GVD+++ +E+ A
Sbjct: 16 EFSSIQSDLAKNIILKNSF-----NSKHIETC------------AGVDLAYWMEEEKEYA 58
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
CIVV++ + +++ + YS ++ PY+PG+LAFRE P+++ ++ ++ P +
Sbjct: 59 ACCIVVINYISKEVIEKVYSYGKINEPYIPGYLAFRELPLIIKAVEKLETE-----PNIF 113
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
M DGNG LH G+A+H N TIGV K+ + G + + A DI+
Sbjct: 114 MFDGNGYLHFNHMGVATHASFFLNSPTIGVAKSYLKIKGSDFEMPKDEVGAY----SDIV 169
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV--KMTCKYRVPEPIRQADI 290
+G A+RS +T KPIFIS G+ I LDT+ I+ ++ R+P P R AD+
Sbjct: 170 I----DNEVYGRALRSRKNT-KPIFISCGNYIDLDTSTDIILNLLSMDSRIPIPTRLADL 224
Query: 291 RSRDYLQK 298
+ QK
Sbjct: 225 ETHIVRQK 232
>gi|334123931|ref|ZP_08497943.1| deoxyribonuclease V [Enterobacter hormaechei ATCC 49162]
gi|419959777|ref|ZP_14475827.1| endonuclease V [Enterobacter cloacae subsp. cloacae GS1]
gi|295095114|emb|CBK84204.1| Endonuclease V [Enterobacter cloacae subsp. cloacae NCTC 9394]
gi|333389667|gb|EGK60827.1| deoxyribonuclease V [Enterobacter hormaechei ATCC 49162]
gi|388605299|gb|EIM34519.1| endonuclease V [Enterobacter cloacae subsp. cloacae GS1]
Length = 223
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ + +VVL +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 RYIGGADVGF-EQGGEVTRAAMVVLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ +I W R P+FI+ GH +S+D+A+ V+
Sbjct: 136 CGAFEPLSAEPGALAPLIHKGEQLAWVWRSKARCN-----PLFIATGHRVSMDSALAWVQ 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 RCMKGYRLPEPTRWAD 206
>gi|169832324|ref|YP_001718306.1| deoxyribonuclease V [Candidatus Desulforudis audaxviator MP104C]
gi|169639168|gb|ACA60674.1| Deoxyribonuclease V [Candidatus Desulforudis audaxviator MP104C]
Length = 226
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 106/200 (53%), Gaps = 19/200 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ GVD+S ++ D + VV L++V ++L PYVPG L+FRE PVL
Sbjct: 37 VRHVCGVDVSSARTDNRLYAAA-VVFSFPELELVEAATAVLPAAFPYVPGLLSFREGPVL 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L +++ P V++ DG G HPRG G+ASH+G+ + T+GV K + D
Sbjct: 96 LEALQHLR-----VTPDVVLCDGQGTAHPRGVGIASHLGLFLDRPTLGVAKTVLVGD--- 147
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
+ + PL+ G G +R T +KP+FIS GH + DTAV +
Sbjct: 148 -------YNPPGPEPGAVSPLV-HQGRVVGTVLR-TKRGVKPVFISPGHLVDPDTAVELA 198
Query: 274 KMTCK-YRVPEPIRQADIRS 292
C+ YR+PEP+RQA + S
Sbjct: 199 LACCQGYRLPEPVRQAHLLS 218
>gi|295835573|ref|ZP_06822506.1| deoxyribonuclease [Streptomyces sp. SPB74]
gi|197699681|gb|EDY46614.1| deoxyribonuclease [Streptomyces sp. SPB74]
Length = 230
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
Q +Q+ L+ RL+ ++ P + + GVD+++ +A
Sbjct: 15 TQARAVQEALRARLVRDE--AGPAPGTVP---------------LTGVDVAYDDARDLVA 57
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
VVL ++ + ++ R+ PYVPG LAFRE P +L L+ ++ P ++
Sbjct: 58 AAA-VVLGPGGRTVLGQATAVGRVSFPYVPGLLAFRELPTVLVALERLR-----VAPGIV 111
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN----LHHVDGLTHSGVRQLLDAKENNN 228
+ DG GL HPR FGLA+H+GVL L + GV KN H G LLD E
Sbjct: 112 VCDGYGLAHPRRFGLAAHLGVLTGLPSFGVAKNPFLFTHAAPGAERGARAPLLDGTEE-- 169
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQ 287
G A+R T +KP+++S GH ++LDTA + +T +YR+PE R+
Sbjct: 170 -------------VGAALR-TRTGVKPVYVSAGHRVTLDTACAHTLALTPRYRLPETTRR 215
Query: 288 ADIRSRDYLQ 297
AD R L+
Sbjct: 216 ADALCRAALK 225
>gi|271498811|ref|YP_003331836.1| Deoxyribonuclease V [Dickeya dadantii Ech586]
gi|270342366|gb|ACZ75131.1| Deoxyribonuclease V [Dickeya dadantii Ech586]
Length = 224
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 112/219 (51%), Gaps = 36/219 (16%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F +E ++ + VL +LQ+V + + +PY+PGFL+FRE P L++
Sbjct: 31 IAGADVGFEQEG-AVTRAAVAVLAYPSLQLVEYQIARIPTVMPYIPGFLSFREYPALMAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLTH 214
+ ++ R P +L VDG+G+ HPR G+ASH G+L N+ TIGV K L
Sbjct: 90 WEQLQHR-----PDLLFVDGHGVSHPRRLGVASHFGLLVNVPTIGVAKRRLCGQFSPLAD 144
Query: 215 -SGVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+G RQ LLD NE I G W +R P+F+S GH + +D+A+
Sbjct: 145 AAGSRQPLLD----KNEQI-------GWVWRSKVRCN-----PLFVSTGHRVGMDSALQW 188
Query: 273 VKMTC--KYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
V M C YR+PEP R AD + + QRWQ
Sbjct: 189 V-MRCMNGYRLPEPTRWADAVA-------SNRPAFQRWQ 219
>gi|401678988|ref|ZP_10810937.1| endonuclease V [Enterobacter sp. SST3]
gi|400213783|gb|EJO44720.1| endonuclease V [Enterobacter sp. SST3]
Length = 223
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ + +VVL +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 QYIGGADVGF-EQGGDVTRAAMVVLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ +I W R P+FI+ GH +S+D+A+ V+
Sbjct: 136 CGAFEPLSAQPGALAPLIHKGEQLAWVWRSKARCN-----PLFIATGHRVSMDSALAWVQ 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 RCMKGYRLPEPTRWAD 206
>gi|411002021|ref|ZP_11378350.1| endonuclease V [Streptomyces globisporus C-1027]
Length = 230
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 128/260 (49%), Gaps = 38/260 (14%)
Query: 42 ASPDPAAQ--AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGG 99
+SP PA + A + +QD L+ R+I ++ P T + G
Sbjct: 3 SSPAPAHETPADEAEGRAVQDRLRDRVILDEAG----PEPGT-------------GLVTG 45
Query: 100 VDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
VD+++ E + VVLD TL+ V E ++ + PYVPG LAFRE P +L L+
Sbjct: 46 VDVAYDDEK-DVVVAAAVVLDAATLETVEEATAVGTIAFPYVPGLLAFREIPTVLQALEE 104
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
+ P +++ DG GL HPR FGLASH+GVL L IGVGKN
Sbjct: 105 LS-----VDPGLVVCDGYGLAHPRRFGLASHLGVLTGLPVIGVGKNPFTF---------- 149
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCK 278
+A D PL+ G G A+R+ +T P+F+SVGH ISLD A +++ +
Sbjct: 150 TYEAPGPLRGDSSPLLDGD-EVVGRALRTRENT-SPVFVSVGHRISLDNACAHTLRLAGR 207
Query: 279 YRVPEPIRQADIRSRDYLQK 298
YR PE R+AD R L++
Sbjct: 208 YRQPESTRRADALCRRTLRE 227
>gi|421781233|ref|ZP_16217701.1| endonuclease V [Serratia plymuthica A30]
gi|407756621|gb|EKF66736.1| endonuclease V [Serratia plymuthica A30]
Length = 228
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 25/211 (11%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E ++ I +L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-AVTRAAIAILRYPSLELVEYQIARVATTMPYIPGFLSFREYPALLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++++ P+++ VDG+G+ HPR G+ASH G+L N+ TIGV K
Sbjct: 90 AWEQLQQK-----PELVFVDGHGISHPRRLGVASHFGLLVNVPTIGVAKKRLCGKFAPLD 144
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-K 274
L E+ E + G W +R P+FI+ GH +S D+A+ V +
Sbjct: 145 VAAGALAPLEDKGEQL-------GWVWRSKVRCN-----PLFIATGHRVSTDSALAWVQR 192
Query: 275 MTCKYRVPEPIRQAD-IRSR-----DYLQKH 299
YR+PEP R AD I SR +LQ+H
Sbjct: 193 CMAGYRLPEPTRWADAIASRRPAFQRWLQQH 223
>gi|292493510|ref|YP_003528949.1| deoxyribonuclease V [Nitrosococcus halophilus Nc4]
gi|291582105|gb|ADE16562.1| Deoxyribonuclease V [Nitrosococcus halophilus Nc4]
Length = 221
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 106/194 (54%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+ F +E I +VVL L L +V + + + PY+PG L+FRE P +L+
Sbjct: 38 VAGVDVGF-EEQGKITRAAVVVLRLADLSLVEQAVARQPTRFPYIPGLLSFRECPAVLAA 96
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L+ + P +L+ DG G+ HPR FG+A H+GVL +L +IGV K + G H
Sbjct: 97 LEKLT-----VMPDLLLCDGQGVAHPRRFGIACHLGVLTDLPSIGVAKT--RLVG-QHGP 148
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM- 275
V + IPL+ G T G +R T + PIFISVGH ISL TA+ V +
Sbjct: 149 V-------PDERGGWIPLV-DKGETVGAVLR-TRTGVNPIFISVGHRISLVTALHYVMVC 199
Query: 276 TCKYRVPEPIRQAD 289
T +YR+PE R AD
Sbjct: 200 TTRYRLPETTRAAD 213
>gi|270265436|ref|ZP_06193695.1| endonuclease V [Serratia odorifera 4Rx13]
gi|270040629|gb|EFA13734.1| endonuclease V [Serratia odorifera 4Rx13]
Length = 228
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 110/211 (52%), Gaps = 25/211 (11%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E ++ I +L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-AVTRAAIAILRYPSLELVEYQIARVATTMPYIPGFLSFREYPALLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++++ P+++ VDG+G+ HPR G+ASH G+L N+ TIGV K
Sbjct: 90 AWEQLQQK-----PELVFVDGHGISHPRRLGVASHFGLLVNVPTIGVAKKRLCGKFAPLD 144
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-K 274
L E+ E + G W +R P+FI+ GH +S D+A+ V +
Sbjct: 145 VAAGALAPLEDKGEQL-------GWVWRSKVRCN-----PLFIATGHRVSTDSALAWVQR 192
Query: 275 MTCKYRVPEPIRQAD-IRSR-----DYLQKH 299
YR+PEP R AD I SR +LQ+H
Sbjct: 193 CMAGYRLPEPTRWADAIASRRPAFQRWLQQH 223
>gi|386022299|ref|YP_005940324.1| endonuclease V [Pseudomonas stutzeri DSM 4166]
gi|327482272|gb|AEA85582.1| endonuclease V [Pseudomonas stutzeri DSM 4166]
Length = 241
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 107/200 (53%), Gaps = 23/200 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F ++ +I V+LD TL++V + + +PYVPG L+FRE P +
Sbjct: 42 LRLIAGVDVGF-EDGGTITRAAAVLLDADTLELVGSSLARIPTNMPYVPGLLSFRELPAV 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVD 210
L L + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K L H +
Sbjct: 101 LQALAELPA-----IPDLIFSDGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKLLTGEHDE 155
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G R L K+ +G G +RS D ++P+ IS G+ +S+ TA
Sbjct: 156 LDLQRGARVALRDKK------------TGEVIGCVLRSK-DKVRPLIISPGNRVSIATAP 202
Query: 271 -MIVKMTCKYRVPEPIRQAD 289
++++ +YR+PEP R AD
Sbjct: 203 ELVMRYVTRYRLPEPTRLAD 222
>gi|354721502|ref|ZP_09035717.1| endonuclease V [Enterobacter mori LMG 25706]
Length = 223
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ + +VVL +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 QYIGGADVGF-EQGGEVTRAAMVVLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ +I W R P+FI+ GH +S+D+A+ V+
Sbjct: 136 CGAFEPLSAEPGALAPLIHKGEQLAWVWRSKARCN-----PLFIATGHRVSMDSALAWVQ 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 RCMKGYRLPEPTRWAD 206
>gi|375258394|ref|YP_005017564.1| endonuclease V [Klebsiella oxytoca KCTC 1686]
gi|397655336|ref|YP_006496038.1| endonuclease V [Klebsiella oxytoca E718]
gi|365907872|gb|AEX03325.1| endonuclease V [Klebsiella oxytoca KCTC 1686]
gi|394344057|gb|AFN30178.1| Endonuclease V [Klebsiella oxytoca E718]
Length = 223
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 108/200 (54%), Gaps = 25/200 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L IGG D+ F +E + +V+L +L++V + + +PY+PGFL+FRE P L
Sbjct: 28 LTLIGGADVGFEQEG-EVTRAAMVLLSYPSLELVEYQVARVATTMPYIPGFLSFRETPAL 86
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 87 LAAWEQLSQK-----PNLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAK--------- 132
Query: 214 HSGVRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
++L E ++ + PL+ G +RS P+F+S GH + LD+A+
Sbjct: 133 ----KRLCGKFEPLGDEPGALAPLL-DKGEQLAWVLRSK-TRCNPLFVSTGHRVGLDSAL 186
Query: 271 MIVKMTCK-YRVPEPIRQAD 289
M V+ K YR+PEP R AD
Sbjct: 187 MWVERCLKGYRLPEPTRWAD 206
>gi|402841655|ref|ZP_10890099.1| deoxyribonuclease V [Klebsiella sp. OBRC7]
gi|402282480|gb|EJU31022.1| deoxyribonuclease V [Klebsiella sp. OBRC7]
Length = 223
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EVTRAAMVLLSYPSLELVEYQVARVATTMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WEQLSQK-----PNLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
++L E ++ + PL+ G +RS P+F+S GH + LD+A+M V
Sbjct: 133 -KRLCGKYEPLGDEPGALAPLL-DKGEQLAWVLRSK-TRCNPLFVSTGHRVGLDSALMWV 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ K YR+PEP R AD
Sbjct: 190 ERCLKGYRLPEPTRWAD 206
>gi|374985405|ref|YP_004960900.1| endonuclease V [Streptomyces bingchenggensis BCW-1]
gi|297156057|gb|ADI05769.1| endonuclease V [Streptomyces bingchenggensis BCW-1]
Length = 243
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 103/203 (50%), Gaps = 24/203 (11%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD+++ E + V LD + L +V E ++ + PYVPG LAFRE P +L L
Sbjct: 57 GVDVAYDDER-GVVAAAAVALDPRGLVVVGEATAVGPVTFPYVPGLLAFREIPAVLDALG 115
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN----LHHVDGLTH 214
+ + + P V++ DG GL HPR FGLASH+GVL L TIGV KN H G
Sbjct: 116 TLDRLGHR--PDVVVCDGYGLAHPRRFGLASHLGVLTGLPTIGVAKNPFTFAHDAPGPRR 173
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL-DTAVMIV 273
LLD E G A+R T D +KP+F+SVGH ++L D +
Sbjct: 174 GQWSPLLDGAEE---------------VGRALR-TQDGVKPVFVSVGHRVTLADACAYAL 217
Query: 274 KMTCKYRVPEPIRQADIRSRDYL 296
+ YR+PE R+AD R L
Sbjct: 218 HLARDYRLPETTRRADALCRRAL 240
>gi|373497120|ref|ZP_09587658.1| hypothetical protein HMPREF0402_01531 [Fusobacterium sp. 12_1B]
gi|404367132|ref|ZP_10972506.1| hypothetical protein FUAG_02002 [Fusobacterium ulcerans ATCC 49185]
gi|313689652|gb|EFS26487.1| hypothetical protein FUAG_02002 [Fusobacterium ulcerans ATCC 49185]
gi|371964142|gb|EHO81679.1| hypothetical protein HMPREF0402_01531 [Fusobacterium sp. 12_1B]
Length = 235
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 117/213 (54%), Gaps = 20/213 (9%)
Query: 94 LKYIGGVDMSFSKE-DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+KY+ G+D+++ E + A CI ++D+ T +IV E + + PY+ G+L+FRE P+
Sbjct: 37 IKYVAGIDLAYWMENEKETAVCCITIIDIDTKEIVEEANTKGDITFPYIAGYLSFRELPL 96
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+L ++ +K + P + + DGNG LHPR G+A+H +IGV K+ + +DG+
Sbjct: 97 ILEIVKKLKIQ-----PDLYVFDGNGYLHPRNMGIATHASFYLKKPSIGVAKSYYKIDGV 151
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+ + KE +I+ G ++R T +KP+F+SVG+ + L+ AV I
Sbjct: 152 EFV----MPEDKEGAYTEIVI----ENKVCGASLR-THKGVKPVFVSVGNYMKLERAVEI 202
Query: 273 VKMTC--KYRVPEPIRQADI---RSRDYLQKHQ 300
+ + + +P P R ADI + RD+ + ++
Sbjct: 203 IMLLVGKESHIPLPTRYADIATHKMRDFYKNNK 235
>gi|422020066|ref|ZP_16366607.1| endonuclease V [Providencia alcalifaciens Dmel2]
gi|414102160|gb|EKT63755.1| endonuclease V [Providencia alcalifaciens Dmel2]
Length = 222
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 19/203 (9%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
++E V +IGG D+ F ++D ++ IVVL LQ+V + + Q+PY+PG L+F
Sbjct: 21 QDEFVSPHFIGGADVGF-EQDGTVTRAVIVVLSWPDLQLVEYQIARVPTQLPYIPGLLSF 79
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE P L++ + ++++ P +++VDG G+ HPR FG+A H G+LAN+ TIGV K+
Sbjct: 80 REVPGLMAAWEKIQQK-----PDLVLVDGQGIAHPRRFGVACHFGLLANVPTIGVAKSRL 134
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
D D + N + + ++ G RS P+++S GH +S
Sbjct: 135 CGD-----------DVELNAEPESVQILKVGQEQLGWVYRSK-KRCNPLYVSPGHKVSFI 182
Query: 268 TAVMIVKMTCK-YRVPEPIRQAD 289
+++ VK + YR+PEP R AD
Sbjct: 183 SSLEWVKRCIQGYRLPEPTRFAD 205
>gi|317494902|ref|ZP_07953312.1| endonuclease V [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917090|gb|EFV38439.1| endonuclease V [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 229
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + I VL +L++V + + Q+PY+PGFL+FRE P L+
Sbjct: 31 IAGADVGF-EQGGDVTRAAIAVLRYPSLELVEYQIARIETQMPYIPGFLSFREYPALIKA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLTH 214
+ ++ R PQ+++VDG G+ HPR G+ASH G+LA++ TIGV K+ L+
Sbjct: 90 WEMLQHR-----PQLVVVDGQGISHPRRLGVASHFGLLADVPTIGVAKSRLCGQFASLSD 144
Query: 215 S-GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
S G Q L+ K+ E I G W R P+FIS GH ISL TA+ +
Sbjct: 145 SVGAIQPLNDKQ---EQI-------GWVWRSKARCN-----PLFISTGHRISLPTALHFI 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ + YR+PEP R AD
Sbjct: 190 QSCMRGYRLPEPTRWAD 206
>gi|443706447|gb|ELU02495.1| hypothetical protein CAPTEDRAFT_122997 [Capitella teleta]
Length = 236
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 122/235 (51%), Gaps = 40/235 (17%)
Query: 70 DFFTWNLPNSTTTNTSTKEEEEVL-------LKYIGGVDMSFSKEDPSIACGCIVVLDLQ 122
+ W+L + T +V+ ++Y+ GVD+ F +E S+ + VL
Sbjct: 8 NLHRWDLSYAEARALQTTLARQVIQHGDLPEIRYVAGVDVGF-EEKGSVTRAAVAVLAFP 66
Query: 123 TLQIVYEDYSLLRL--QVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLL 180
L+++ DY++ ++ Q+PY+PG L+FRE P +L+ L + + P +L DG G+
Sbjct: 67 GLELL--DYAVAKVPTQMPYIPGLLSFRECPAILAALSRLTVQ-----PDLLFCDGQGIA 119
Query: 181 HPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT-----HSGVRQLLDAKENNNEDIIPLM 235
HPR FG+A HIGVL L IGV K+ + G + G R L +NNE I
Sbjct: 120 HPRRFGVACHIGVLTGLPAIGVAKS--RLCGKSAVLPEQKGARAEL---WDNNELI---- 170
Query: 236 GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT-CKYRVPEPIRQAD 289
G +RS ++P++IS+GH ISL+TAV V+ +YR+PE R AD
Sbjct: 171 -------GNVVRSR-TAVRPLYISIGHRISLNTAVHYVEACLTRYRLPETTRWAD 217
>gi|146283944|ref|YP_001174097.1| endonuclease V [Pseudomonas stutzeri A1501]
gi|145572149|gb|ABP81255.1| endonuclease V [Pseudomonas stutzeri A1501]
Length = 241
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 23/200 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F ++ ++ V+LD TL++V + + +PYVPG L+FRE P +
Sbjct: 42 LRLIAGVDVGF-EDGGTVTRAAAVLLDADTLELVGSSLARIPTNMPYVPGLLSFRELPAV 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVD 210
L L + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K L H +
Sbjct: 101 LQALAELPA-----IPDLIFSDGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKLLTGEHDE 155
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G R L K+ +G G +RS D ++P+ IS G+ +S+ TA
Sbjct: 156 LDLQRGARVALRDKK------------TGEVIGCVLRSK-DKVRPLIISPGNRVSIATAP 202
Query: 271 -MIVKMTCKYRVPEPIRQAD 289
++++ +YR+PEP R AD
Sbjct: 203 ELVMRYVTRYRLPEPTRLAD 222
>gi|222099774|ref|YP_002534342.1| Endonuclease V [Thermotoga neapolitana DSM 4359]
gi|254767281|sp|B9K7P3.1|NFI_THENN RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|221572164|gb|ACM22976.1| Endonuclease V [Thermotoga neapolitana DSM 4359]
Length = 225
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 113/226 (50%), Gaps = 28/226 (12%)
Query: 74 WNLPNSTTTNTSTKEEEEVLLK-------YIGGVDMSFSKEDPSIACGCIVVLDLQTLQI 126
W+L E++L K Y+ GVD+SF K + +A IVV++ T +I
Sbjct: 9 WDLSPEEAMKIQNVLREKILFKPFEGEPKYVAGVDLSFPKREEGLAV--IVVMEYPTFKI 66
Query: 127 VYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFG 186
V ++ PY+PG LAFRE P+ L + +K + P V++ DG G+ HPR G
Sbjct: 67 VELVSERGKVDFPYIPGLLAFREGPLFLKAWEKLKTK-----PDVVVFDGQGIAHPRKLG 121
Query: 187 LASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAM 246
+ASH+G+ + TIGV K+ + R+ + +NE+II G M
Sbjct: 122 IASHMGLFIEIPTIGVAKSRLY-GTYREPENRRCSWSYLYDNEEII----------GCVM 170
Query: 247 RSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQADI 290
R T + PIF+S GH I +++++ +VK R+PEP R A I
Sbjct: 171 R-TREGSAPIFVSPGHLIDVESSIRLVKSFTLPGRRLPEPTRMAHI 215
>gi|398795089|ref|ZP_10555018.1| deoxyinosine 3'endonuclease (endonuclease V) [Pantoea sp. YR343]
gi|398207217|gb|EJM93970.1| deoxyinosine 3'endonuclease (endonuclease V) [Pantoea sp. YR343]
Length = 222
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F ++ I +V+L+ +L +V + + +PY+PGFL+FRE P LL
Sbjct: 29 RFIGGADVGF-EQGGEITRAALVILEYPSLTLVEHRIARVATTMPYIPGFLSFREMPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ P +L VDG+G+ HPR G+A+H G L ++ TIGV K
Sbjct: 88 EAWQQLSH-----MPDLLFVDGHGISHPRRLGVAAHFGSLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G LDA+ + + ++ G W R P+FIS GH +S+D+A+ V+
Sbjct: 136 CGRFAELDAEPGSRQPLLDKGEQIGWVWRSKARCN-----PLFISTGHRVSMDSALHWVE 190
Query: 275 M-TCKYRVPEPIRQAD 289
T YR+PEP R AD
Sbjct: 191 ACTAGYRLPEPTRWAD 206
>gi|291435843|ref|ZP_06575233.1| endonuclease V [Streptomyces ghanaensis ATCC 14672]
gi|291338738|gb|EFE65694.1| endonuclease V [Streptomyces ghanaensis ATCC 14672]
Length = 230
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 120/251 (47%), Gaps = 44/251 (17%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
Q +QD L+ R++ ++ P T + GVD+++ E +
Sbjct: 15 EQARAVQDALRARVVLDE---PGPPPGT--------------GRVTGVDVAYDDER-DVV 56
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
VVLD +L +V E ++ R+ PYVPG LAFRE P +L+ LD + P ++
Sbjct: 57 AAAAVVLDAASLDVVAEATAVGRISFPYVPGLLAFRELPTVLAALDALP-----CPPGLV 111
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN----LHHVDGLTHSGVRQLLDAKENNN 228
+ DG G HPR FGLASH+GVL L TIGV KN H LLD +E
Sbjct: 112 VCDGYGRAHPRRFGLASHLGVLTGLPTIGVAKNPFTFAHDTPDAPRGSTAPLLDGREE-- 169
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQ 287
G A+R T D +KP+F+SVGH LD A + +T +R+PE R+
Sbjct: 170 -------------VGRALR-TRDAVKPVFVSVGHRTDLDNACAHTLALTPAHRLPETTRR 215
Query: 288 ADIRSRDYLQK 298
AD R L++
Sbjct: 216 ADALCRRALRE 226
>gi|423126794|ref|ZP_17114473.1| endonuclease V [Klebsiella oxytoca 10-5250]
gi|376396788|gb|EHT09427.1| endonuclease V [Klebsiella oxytoca 10-5250]
Length = 223
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EVTRAAMVLLSYPSLELVEYQVARVATTMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WEQLSQK-----PNLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKR---------- 134
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ +A + + PL+ G +RS P+F+S GH + LD+A+M V+
Sbjct: 135 LCGKFEALGDEPGALAPLL-DKGDQLAWVLRSK-TRCNPLFVSTGHRVGLDSALMWVERC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 LKGYRLPEPTRWAD 206
>gi|242241108|ref|YP_002989289.1| endonuclease V [Dickeya dadantii Ech703]
gi|242133165|gb|ACS87467.1| Deoxyribonuclease V [Dickeya dadantii Ech703]
Length = 224
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 114/219 (52%), Gaps = 34/219 (15%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F ++ + +VVL +L++V + + +PY+PGFL+FRE+P LL+
Sbjct: 30 FIAGADVGF-EQGGDVTRAALVVLAYPSLELVEYRVARIPTVMPYIPGFLSFRESPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + R P++L VDG+G+ HPR G+ASH G+L N+ TIGV K
Sbjct: 89 AWEMLSHR-----PELLFVDGHGVSHPRRLGVASHFGLLVNVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
G L A+ + + PLM S G W R P+F+S GH +++D+A++
Sbjct: 137 GQVAPLAAEVGSQQ---PLMDRSEQIGWVWRSKARCN-----PLFVSTGHRVAIDSALLW 188
Query: 273 VKMTC--KYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
V M C YR+PEP R AD + + QRWQ
Sbjct: 189 V-MRCMRGYRLPEPTRWADAVA-------SNRPAFQRWQ 219
>gi|212709047|ref|ZP_03317175.1| hypothetical protein PROVALCAL_00079 [Providencia alcalifaciens DSM
30120]
gi|212688336|gb|EEB47864.1| hypothetical protein PROVALCAL_00079 [Providencia alcalifaciens DSM
30120]
Length = 223
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 111/203 (54%), Gaps = 19/203 (9%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
++E V +IGG D+ F ++D ++ IVVL LQ+V + + Q+PY+PG L+F
Sbjct: 22 QDEFVPPHFIGGADVGF-EQDGTVTRAVIVVLSWPDLQLVEYQIARVPTQLPYIPGLLSF 80
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE P L++ + ++++ P +++VDG G+ HPR FG+A H G+LAN+ TIGV K+
Sbjct: 81 REVPGLMAAWEKIQQK-----PDLVLVDGQGIAHPRRFGVACHFGLLANVPTIGVAKSRL 135
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
D D + N + + ++ G RS P+++S GH +S
Sbjct: 136 CGD-----------DVELNAEPESVQILKVGQEQLGWVYRSK-KRCNPLYVSPGHKVSFI 183
Query: 268 TAVMIVKMTCK-YRVPEPIRQAD 289
+++ VK + YR+PEP R AD
Sbjct: 184 SSLEWVKRCIQGYRLPEPTRFAD 206
>gi|434393047|ref|YP_007127994.1| Endonuclease V [Gloeocapsa sp. PCC 7428]
gi|428264888|gb|AFZ30834.1| Endonuclease V [Gloeocapsa sp. PCC 7428]
Length = 222
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 112/206 (54%), Gaps = 29/206 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLR--LQVPYVPGFLAFREAP 151
++Y+ GVDM F +I+ + VL LQ+ ++Y++ R PY+PG L+FRE P
Sbjct: 37 VRYVAGVDMGFESAG-TISRAAVAVLSFPALQL--QEYAIARRPTSFPYIPGLLSFREIP 93
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HH 208
LL L+ + P +++ DG G+ HPR G+ASH+G++ ++ TIGV K+L H
Sbjct: 94 ALLDALEKINTT-----PDLILCDGQGIAHPRRLGIASHLGLILDMPTIGVAKSLLVGKH 148
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
+ G Q L ++ T G A+R+ T KP++IS GH +SL T
Sbjct: 149 QEVPNIKGSWQPLIHRQE--------------TIGAALRTRVGT-KPVYISSGHRVSLLT 193
Query: 269 AV-MIVKMTCKYRVPEPIRQADIRSR 293
A+ +++ T KYR+PE R AD S+
Sbjct: 194 AIDYVLQCTPKYRLPETTRIADKLSK 219
>gi|90022767|ref|YP_528594.1| endonuclease V [Saccharophagus degradans 2-40]
gi|89952367|gb|ABD82382.1| Endonuclease V [Saccharophagus degradans 2-40]
Length = 260
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 23/198 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L I G D+S +K P I G IVVL+ +TL+I+ + PY+PG+L+FRE P L
Sbjct: 60 LTLIAGADISCNKNSPVIYAG-IVVLNAETLEIIERASVITETAFPYIPGYLSFREVPAL 118
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L + + P +M+DG+G++HPR G+A+H G+ AN+ T+G K
Sbjct: 119 LQAWQKLTTK-----PDAVMLDGHGVMHPRKVGVATHFGLAANVATLGCAK--------- 164
Query: 214 HSGVRQLLDAKEN--NNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
++L+ ++ +D + + G G RS +KPIFIS G ++ + A+
Sbjct: 165 ----KRLIGRFDDPAPAQDSVTELTYQGEMRGYVYRSRAG-IKPIFISPGTGMNYEDALS 219
Query: 272 IVKMTCK-YRVPEPIRQA 288
I + TC YR+PEP R A
Sbjct: 220 ITRQTCAGYRLPEPTRLA 237
>gi|392977127|ref|YP_006475715.1| endonuclease V [Enterobacter cloacae subsp. dissolvens SDM]
gi|392323060|gb|AFM58013.1| endonuclease V [Enterobacter cloacae subsp. dissolvens SDM]
Length = 223
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 QYIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ +I W R P+FI+ GH +S+D+A+ V+
Sbjct: 136 CGAFEPLSAEPGALAPLIDKGEQLAWVWRSKARCN-----PLFIATGHRVSMDSALTWVQ 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 RCTKGYRLPEPTRWAD 206
>gi|119719592|ref|YP_920087.1| deoxyribonuclease V [Thermofilum pendens Hrk 5]
gi|166233963|sp|A1RY04.1|NFI_THEPD RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|119524712|gb|ABL78084.1| Endonuclease V [Thermofilum pendens Hrk 5]
Length = 232
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 111/208 (53%), Gaps = 29/208 (13%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAP 151
++ GVD++F + A VV++ + +V DYS+ R +V PYVP LAFRE
Sbjct: 36 VRRAAGVDVAFKGD---YAFAAAVVVEYPSFSVV--DYSVTRTEVRFPYVPTLLAFREVW 90
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
+ L +K P VL+VDGNG LHP G A H+GVL + TIGV K L
Sbjct: 91 PAYTALKRLKSE-----PDVLLVDGNGRLHPFKAGFACHLGVLVDKPTIGVAKKL----- 140
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
L+ + + P++ G G+A++ T + KP+F+S+GH ISL+TAV
Sbjct: 141 --------LVGEVGSWKSGVAPVL-YRGEVLGMAVK-TSERSKPVFVSIGHKISLNTAVW 190
Query: 272 IVKMTCK--YRVPEPIRQADIRSRDYLQ 297
IV+M K R+PEP+R A + + Y +
Sbjct: 191 IVRMFTKRGLRLPEPLRLAHLYATAYAR 218
>gi|261340910|ref|ZP_05968768.1| deoxyribonuclease V [Enterobacter cancerogenus ATCC 35316]
gi|288316965|gb|EFC55903.1| deoxyribonuclease V [Enterobacter cancerogenus ATCC 35316]
Length = 223
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ + +VVL +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 QYIGGADVGF-EQGGEVTRAAMVVLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ +I W R P+FI+ GH +S+D+A+ V+
Sbjct: 136 CGKFEPLSAEPGALAPLIDKGEQLAWVWRSKARCN-----PLFIATGHRVSMDSALAWVQ 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 RCMKGYRLPEPTRWAD 206
>gi|421725175|ref|ZP_16164374.1| endonuclease V [Klebsiella oxytoca M5al]
gi|410374071|gb|EKP28753.1| endonuclease V [Klebsiella oxytoca M5al]
Length = 223
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EVTRAAMVLLSYPSLELVEYQVARVATTMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + +R P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WELLSRR-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
++L E ++ + PL+ G +RS P+F+S GH + LD+A+M V
Sbjct: 133 -KRLCGKFEPLGDEPGALAPLL-DKGDQLAWVLRSK-TRCNPLFVSTGHRVGLDSALMWV 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ K YR+PEP R AD
Sbjct: 190 ERCLKGYRLPEPTRWAD 206
>gi|365834034|ref|ZP_09375484.1| deoxyribonuclease V [Hafnia alvei ATCC 51873]
gi|364570532|gb|EHM48141.1| deoxyribonuclease V [Hafnia alvei ATCC 51873]
Length = 229
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + I VL +L++V + + Q+PY+PGFL+FRE P L++
Sbjct: 31 IAGADVGF-EQGGDVTRAAIAVLRYPSLELVEYQIARIETQMPYIPGFLSFREYPALINA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLTH 214
+ ++ R PQ+++VDG G+ HPR G+ASH G+LA++ TIGV K+ L+
Sbjct: 90 WEMLQHR-----PQLVVVDGQGISHPRRLGVASHFGLLADVPTIGVAKSRLCGQFAPLSD 144
Query: 215 S-GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
S G Q L+ K+ E I G W R P+FIS GH ISL TA+ +
Sbjct: 145 SVGAIQPLNDKQ---EQI-------GWVWRSKARCN-----PLFISTGHRISLPTALHFI 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ + YR+PEP R AD
Sbjct: 190 QSCMRGYRLPEPTRWAD 206
>gi|320539742|ref|ZP_08039405.1| putative endonuclease V [Serratia symbiotica str. Tucson]
gi|320030207|gb|EFW12223.1| putative endonuclease V [Serratia symbiotica str. Tucson]
Length = 228
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 108/211 (51%), Gaps = 25/211 (11%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E ++ I +L +L++V + + +PY+PGFL+FRE+P LL+
Sbjct: 31 FIAGADVGFEQEG-AVTRAAIAILRYPSLELVEYQVARIATTMPYIPGFLSFRESPALLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K +
Sbjct: 90 AWQQLWQK-----PDLIFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGEFAPLD 144
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-K 274
L E+ E + G W R P+FI+ GH IS D+A+ V +
Sbjct: 145 AAAGSLAPLEDKGEQL-------GWVWRSKARCN-----PLFIATGHRISADSALAWVQR 192
Query: 275 MTCKYRVPEPIRQAD-IRSR-----DYLQKH 299
YR+PEP R AD I SR +LQ+H
Sbjct: 193 CMAGYRLPEPTRWADAIASRRPAFQHWLQQH 223
>gi|423105882|ref|ZP_17093583.1| endonuclease V [Klebsiella oxytoca 10-5242]
gi|376379743|gb|EHS92494.1| endonuclease V [Klebsiella oxytoca 10-5242]
Length = 223
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EVTRAAMVLLSYPSLELVEYQVARVATTMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WEQLSQK-----PNLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
++L E ++ + PL+ G +RS P+F+S GH + LD+A+M V
Sbjct: 133 -KRLCGKFEPLGDEPGALAPLL-DKGEQLAWVLRSK-TRCNPLFVSTGHRVGLDSALMWV 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ K YR+PEP R AD
Sbjct: 190 ERCLKGYRLPEPTRWAD 206
>gi|157368537|ref|YP_001476526.1| endonuclease V [Serratia proteamaculans 568]
gi|172047443|sp|A8G8F8.1|NFI_SERP5 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|157320301|gb|ABV39398.1| Deoxyribonuclease V [Serratia proteamaculans 568]
Length = 228
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 108/211 (51%), Gaps = 25/211 (11%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E ++ I +L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-AVTRAAIAILRYPSLELVEYQVARVATTMPYIPGFLSFREYPALLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + H P +++VDG+G+ HPR G+ASH G+L N+ TIGV K
Sbjct: 90 AWEQL-----HQKPDLVLVDGHGISHPRRLGVASHFGLLVNVPTIGVAKK-------RLC 137
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-K 274
G LD D + + G G RS P+FIS GH + D+A+ V +
Sbjct: 138 GKFAPLD----EATDALAPLEDKGEQLGWVWRSK-ARCNPLFISTGHRVGADSALAWVQR 192
Query: 275 MTCKYRVPEPIRQAD-IRSR-----DYLQKH 299
YR+PEP R AD I SR +LQ+H
Sbjct: 193 CMAGYRLPEPTRWADAIASRRPAFQRWLQQH 223
>gi|333925142|ref|YP_004498721.1| endonuclease V [Serratia sp. AS12]
gi|333930095|ref|YP_004503673.1| endonuclease V [Serratia plymuthica AS9]
gi|386326966|ref|YP_006023136.1| Endonuclease V [Serratia sp. AS13]
gi|333471702|gb|AEF43412.1| Endonuclease V [Serratia plymuthica AS9]
gi|333489202|gb|AEF48364.1| Endonuclease V [Serratia sp. AS12]
gi|333959299|gb|AEG26072.1| Endonuclease V [Serratia sp. AS13]
Length = 228
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 109/211 (51%), Gaps = 25/211 (11%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E ++ I +L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-AVTRAAIAILRYPSLELVEYQIARVATTMPYIPGFLSFREYPALLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++++ P ++ VDG+G+ HPR G+ASH G+L N+ TIGV K
Sbjct: 90 AWEQLQQK-----PDLVFVDGHGISHPRRLGVASHFGLLVNVPTIGVAKKRLCGKFAPLD 144
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
L E+ E + G W +R P+FI+ GH +S D+A+ V+
Sbjct: 145 VAAGALAPLEDKGEQL-------GWVWRSKVRCN-----PLFIATGHRVSTDSALAWVRR 192
Query: 276 -TCKYRVPEPIRQAD-IRSR-----DYLQKH 299
YR+PEP R AD I SR +LQ+H
Sbjct: 193 CMAGYRLPEPTRWADAIASRRPAFQRWLQQH 223
>gi|296100629|ref|YP_003610775.1| endonuclease V [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295055088|gb|ADF59826.1| endonuclease V [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 222
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 QYIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ +I W R P+FI+ GH +S+D+A+ V+
Sbjct: 136 CGAFEPLSAEPGALAPLIDKGEQLAWVWRSKARCN-----PLFIATGHRVSMDSALAWVQ 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 RCMKGYRLPEPTRWAD 206
>gi|394988083|ref|ZP_10380921.1| hypothetical protein SCD_00484 [Sulfuricella denitrificans skB26]
gi|393792541|dbj|GAB70560.1| hypothetical protein SCD_00484 [Sulfuricella denitrificans skB26]
Length = 223
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 108/199 (54%), Gaps = 25/199 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ GVD+ F +E I + VL TL++V + + PYVPG L+FRE P +
Sbjct: 36 VRHVAGVDVGF-EEGGGITRAAVAVLAFPTLELVEHAIFRIPTRFPYVPGLLSFREVPAV 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ L+ + P +L+ DG G+ HPR FG+ASH+G+L+ + +IGV K
Sbjct: 95 IGALERLT-----VIPDLLLCDGQGIAHPRRFGIASHLGLLSGIPSIGVAKT-------- 141
Query: 214 HSGVRQLLDAKE--NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
R + + E + +PL G T G +RS P +KP++IS+GH ISL TA+
Sbjct: 142 ----RLIGEQVEPPDRRGAFVPLR-YHGETIGAILRSRPG-VKPLYISIGHRISLATALD 195
Query: 272 IVKMTC--KYRVPEPIRQA 288
V M C +YR+PE R A
Sbjct: 196 FV-MACVTRYRLPETTRWA 213
>gi|291301449|ref|YP_003512727.1| Deoxyribonuclease V [Stackebrandtia nassauensis DSM 44728]
gi|290570669|gb|ADD43634.1| Deoxyribonuclease V [Stackebrandtia nassauensis DSM 44728]
Length = 223
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 19/213 (8%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
+E V + GVD+++ K D +A V +L +L +V + R++ PY PG L
Sbjct: 26 REGVRVAPGVVAGVDIAYDK-DSELAAAAAVAFELGSLAVVATATVVGRVEFPYRPGLLG 84
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P+ +L+ + A ++++ DG+GL HPRGFG+A H+GV N T+G+ KN
Sbjct: 85 FREVPLSSQVLERLDVAA-----ELVVCDGHGLAHPRGFGMACHLGVHMNQPTMGIAKNP 139
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
+ G R+ N +D++ G +R T D +KP+++SVGH I L
Sbjct: 140 PEF-AVNEPGKRRGSSTLIFNGDDVV----------GACLR-TQDNVKPVYVSVGHRIGL 187
Query: 267 DTAVMI-VKMTCKYRVPEPIRQADIRSRDYLQK 298
D AV + ++++ ++R+P R AD SRD L +
Sbjct: 188 DEAVEVALRLSPRFRLPATTRAADRLSRDTLAE 220
>gi|227536565|ref|ZP_03966614.1| deoxyribonuclease V [Sphingobacterium spiritivorum ATCC 33300]
gi|227243642|gb|EEI93657.1| deoxyribonuclease V [Sphingobacterium spiritivorum ATCC 33300]
Length = 235
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 122/241 (50%), Gaps = 43/241 (17%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + T+IQ +L+ +L ++ P++ T IGG D+S++K D I
Sbjct: 8 LPEATDIQQDLRHKL------RFDRPDTQAIYT------------IGGADISYNK-DSEI 48
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
IV+LD + + + PY+PG+LAFRE P LL+ + R P V
Sbjct: 49 LFAAIVILDYPDMTLRSYALATGHSSFPYIPGYLAFREVPALLNAWSLLPVR-----PDV 103
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNN 228
L++DG G+LHPR G+ASH GVL TIG KN H D + G
Sbjct: 104 LVLDGQGILHPRQMGIASHFGVLTGQATIGCAKNSLYGRHADLTPNRGAST--------- 154
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM-TCKYRVPEPIRQ 287
P++ G+ T G +R T + +KP++IS G+ +S++ ++ +++ T +YR+PEP R
Sbjct: 155 ----PIVEGT-KTIGHLLR-TKEAVKPVYISPGYGLSVEKSLEVIRQCTGRYRIPEPTRL 208
Query: 288 A 288
A
Sbjct: 209 A 209
>gi|427421096|ref|ZP_18911279.1| deoxyinosine 3'endonuclease (endonuclease V) [Leptolyngbya sp. PCC
7375]
gi|425756973|gb|EKU97827.1| deoxyinosine 3'endonuclease (endonuclease V) [Leptolyngbya sp. PCC
7375]
Length = 240
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 117/233 (50%), Gaps = 38/233 (16%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
IQ+ L+ ++IT D F S TT + G+D F ++D +I +V
Sbjct: 19 IQNRLRSQVITTDQFA-----SITT--------------VAGIDAGF-EQDGTITRAAVV 58
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VL L L ++ + + PYVP L+FRE P +L L + P +++ DG
Sbjct: 59 VLQLPELTLLEQAIAYRPTTFPYVPSLLSFREMPTVLDALRRLT-----LEPDLILCDGA 113
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
G+ HPR G+ASH+GVL + TIGV K+ G L A + +PLM
Sbjct: 114 GIAHPRRLGIASHLGVLIDKPTIGVAKS-------RLLGTHGELPADKGG---WVPLM-D 162
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
G G +RS T KP+F+S GH ISL+TAV +++ T KYR+PE R AD
Sbjct: 163 RGERIGAVLRSRTGT-KPLFVSAGHRISLETAVDYVLQCTPKYRLPETTRLAD 214
>gi|372487649|ref|YP_005027214.1| deoxyinosine 3'endonuclease [Dechlorosoma suillum PS]
gi|359354202|gb|AEV25373.1| deoxyinosine 3'endonuclease (endonuclease V) [Dechlorosoma suillum
PS]
Length = 217
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ + GVD+ F ++ ++ + VLD L + + + PYVPG L+FRE P +
Sbjct: 31 LRRVAGVDVGF-EDGGAVTRAAVAVLDFPALTPAAQAVARVPTTFPYVPGLLSFREGPGV 89
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L+ ++ P +L+ DG G+ HPR G+ASH+GVL ++ +IGVGK
Sbjct: 90 LAALEQLEA-----LPDLLLCDGQGIAHPRRLGIASHLGVLLDVPSIGVGK--------- 135
Query: 214 HSGVRQLLDAKENNNEDIIPLM---GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
S + +A D +PL GGS G +RS L P++IS+GH +SL TA+
Sbjct: 136 -SRLTGWHEAVGPEKGDWVPLWDRRGGS-EVIGAVLRSRRGCL-PLYISIGHRVSLATAI 192
Query: 271 -MIVKMTCKYRVPEPIRQA 288
+++ T +YR+PE RQA
Sbjct: 193 ELVLACTPRYRLPETTRQA 211
>gi|254168478|ref|ZP_04875322.1| Endonuclease V family [Aciduliprofundum boonei T469]
gi|197622533|gb|EDY35104.1| Endonuclease V family [Aciduliprofundum boonei T469]
Length = 303
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 119/244 (48%), Gaps = 54/244 (22%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + + Q+EL+K++I ED IGGVD+S+S + +
Sbjct: 108 LKKLRKEQEELRKKVILEDAHA---------------------SLIGGVDVSYSSRNAYV 146
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
A +V++ +++ E +R+ PY+P +LAFRE P++ +L + +
Sbjct: 147 A---LVIMRDGKYEVIGEK---MRVDFPYIPTYLAFREEPIISEILKKVDDDI------L 194
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
LM+DGNG+LHPR GLA+++GV N+ TIGV K L L+ N I
Sbjct: 195 LMIDGNGILHPRFMGLATYVGVKNNIATIGVAKKL-------------LMGEIREGNIYI 241
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIR 291
M G G K I++S+GH I+LD+AV +VK KY+ PEPIR A I
Sbjct: 242 GSQMVGQYIPSG--------RKKGIYVSLGHRITLDSAVRVVKKYLKYKNPEPIRLAHIY 293
Query: 292 SRDY 295
+ +
Sbjct: 294 ANKF 297
>gi|238752800|ref|ZP_04614268.1| Endonuclease V [Yersinia rohdei ATCC 43380]
gi|238708998|gb|EEQ01248.1| Endonuclease V [Yersinia rohdei ATCC 43380]
Length = 234
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 114/219 (52%), Gaps = 32/219 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F ++ +I I VL +L++V + + +PY+PG L+FRE P L
Sbjct: 29 VRFIAGADVGFEQQG-AITRAAIAVLRYPSLELVEYHIARVVTSLPYIPGLLSFREYPAL 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ D +++R P ++ VDG G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 88 LAAWDKLQQR-----PDLVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKS-------R 135
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G Q L N+N + PL+ G+ G W R P+FIS GH +S+ +A+
Sbjct: 136 LCGHFQPLG---NDNGALQPLVEGNEQLGWVWRSKARCN-----PLFISPGHRVSVGSAL 187
Query: 271 MIVK-MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
V+ YR+PEP R AD + + Q QRW
Sbjct: 188 EWVQHCMAGYRLPEPTRWADAIASNRAQ-------FQRW 219
>gi|392419731|ref|YP_006456335.1| endonuclease V [Pseudomonas stutzeri CCUG 29243]
gi|390981919|gb|AFM31912.1| endonuclease V [Pseudomonas stutzeri CCUG 29243]
Length = 242
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 106/201 (52%), Gaps = 25/201 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ I GVD+ F ++ +I V+LD TL++V + + +PY+PG L+FRE P +
Sbjct: 42 LRLIAGVDVGF-EDGGTITRAAAVLLDADTLELVGSSLARIPTNMPYIPGLLSFRELPAV 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHV 209
L L + P ++ DG+G+ HPR G+A+H+GV+ L TIGV K L H
Sbjct: 101 LQALGELPA-----VPDLIFSDGHGIAHPRRLGIAAHLGVVTGLPTIGVAKKLLTGAHDE 155
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
L +L D K +G G +RS D ++P+ IS G+ +S+ TA
Sbjct: 156 LELARGAQVELRDKK-------------TGEVIGCVLRSK-DKVRPLIISPGNRVSIVTA 201
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
++++ +YR+PEP R AD
Sbjct: 202 PQLVMRYVTRYRLPEPTRLAD 222
>gi|302537924|ref|ZP_07290266.1| endonuclease V [Streptomyces sp. C]
gi|302446819|gb|EFL18635.1| endonuclease V [Streptomyces sp. C]
Length = 229
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 129/254 (50%), Gaps = 38/254 (14%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
PA +A+ IQDEL+ R++ ++ P + GVD+++
Sbjct: 7 PANEAEARA---IQDELRGRVVLDE--AGPPPGQ---------------GLVAGVDVAYD 46
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
E + VVLD TL++V E + + PYVPG LAFRE P +L+ L+ +
Sbjct: 47 DER-DLVAAAAVVLDAATLEVVAESTAAGSVSFPYVPGLLAFRELPTVLAALEALP---- 101
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE 225
P +++ DG GL HPRGFGLA H+GV+ L ++GV KN T + E
Sbjct: 102 -VTPDLVVCDGYGLAHPRGFGLACHLGVVTGLPSMGVAKNP-----FTFTCEEPGAPRGE 155
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEP 284
++ PL+ G+ G A+R T +KP+++SVGH +SLD A + ++ ++R+PE
Sbjct: 156 SS-----PLLAPDGAVVGRALR-TQHGIKPVYVSVGHRVSLDNACAHALALSPRFRIPET 209
Query: 285 IRQADIRSRDYLQK 298
R AD R L++
Sbjct: 210 TRHADSLCRRALRE 223
>gi|423118021|ref|ZP_17105705.1| endonuclease V [Klebsiella oxytoca 10-5246]
gi|376402469|gb|EHT15062.1| endonuclease V [Klebsiella oxytoca 10-5246]
Length = 223
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 44/238 (18%)
Query: 57 EIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCI 116
E Q EL +I ED + P + IGG D+ F +E + I
Sbjct: 8 ERQQELAASVIREDRLDRDPP-----------------RLIGGADVGFEQEG-EVTRAAI 49
Query: 117 VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDG 176
V+L +L++V + + +PY+PGFL+FRE P LL+ + ++ P +L VDG
Sbjct: 50 VLLAYPSLELVEYQVARVATTMPYIPGFLSFRETPALLAAWQQLAQK-----PDLLFVDG 104
Query: 177 NGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHVDGLTHSGVRQLLDAKENNNEDII 232
+G+ HPR G+ASH G+L ++ TIGV K + G + L+D NE +
Sbjct: 105 HGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGQFMLPGDEPGALAPLMD----KNEQL- 159
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
W R P+F+S GH ++LD+A+ V+ K YR+PEP R AD
Sbjct: 160 ------AWVWRSKARCN-----PLFVSTGHRVALDSALTWVQRCIKGYRLPEPTRWAD 206
>gi|77163752|ref|YP_342277.1| deoxyribonuclease V [Nitrosococcus oceani ATCC 19707]
gi|254435472|ref|ZP_05048979.1| Endonuclease V superfamily [Nitrosococcus oceani AFC27]
gi|76882066|gb|ABA56747.1| Endonuclease V [Nitrosococcus oceani ATCC 19707]
gi|207088583|gb|EDZ65855.1| Endonuclease V superfamily [Nitrosococcus oceani AFC27]
Length = 219
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 111/229 (48%), Gaps = 34/229 (14%)
Query: 73 TWNLPNSTTTNTSTKEEEEVL-------LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQ 125
+WNL + ++V+ + ++ GVD+ F +E I +VVL L L
Sbjct: 5 SWNLSPKEAVALQRRLADQVVAEDRLGQVHFVAGVDVGF-EEQGKITRAAVVVLRLADLS 63
Query: 126 IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGF 185
+V + + PY+PG L+FRE P +L+ L+ + P +L+ DG G+ HPR F
Sbjct: 64 LVEQVVARRPTHFPYIPGLLSFRECPTVLAALEKLT-----VTPNLLLCDGQGIAHPRRF 118
Query: 186 GLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI----IPLMGGSGST 241
G+A H+GVL L +IGV K L K D PL G T
Sbjct: 119 GIACHLGVLTGLPSIGVAKT--------------RLVGKHGPAPDKRGGWTPLT-DKGET 163
Query: 242 WGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQAD 289
GV +R T + P+F+S GH ISL TA+ ++ T +YR+PE R AD
Sbjct: 164 IGVVLR-TRIKVNPVFVSTGHRISLLTAIQYVMACTTRYRLPETTRLAD 211
>gi|220936336|ref|YP_002515235.1| endonuclease V [Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|219997646|gb|ACL74248.1| Deoxyribonuclease V [Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 240
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 33/212 (15%)
Query: 86 TKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFL 145
+E+ LK + GVD+ F ++ I + VL L V + + PYVPG L
Sbjct: 28 VREDRLGPLKRVAGVDVGF-EDSGQITRAVVSVLSWPDLVPVEDAVARRPTSFPYVPGLL 86
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+FRE P +L L+ + P +L+ DG G+ HPR G+A+H+GVL +L IGVGK
Sbjct: 87 SFRELPAVLEALERLSA-----LPDLLLCDGQGIAHPRRLGIAAHLGVLTDLPAIGVGKT 141
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW-------GVAMRSTPDTLKPIFI 258
+L+ A D +P G+ S G +R T +KP+++
Sbjct: 142 -------------RLIGA-----HDEVPSARGAWSALRDGDEVIGAVLR-TRAGVKPVYV 182
Query: 259 SVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
S+GH +SL+T V ++++ +YR+PEPIR+AD
Sbjct: 183 SIGHRVSLETTVELVLQAAPRYRLPEPIRRAD 214
>gi|345010445|ref|YP_004812799.1| endonuclease V [Streptomyces violaceusniger Tu 4113]
gi|344036794|gb|AEM82519.1| Endonuclease V [Streptomyces violaceusniger Tu 4113]
Length = 246
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Query: 124 LQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPR 183
L +V E ++ R+ PYVPG LAFRE P +L L ++ +R P +++ DG GL HPR
Sbjct: 75 LAVVAEATAVGRVTFPYVPGLLAFREIPAVLDALGDLDRRLGR-RPDLVVCDGYGLAHPR 133
Query: 184 GFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWG 243
FGLASH+GVL L TIGV KN G H+ L D PL+ G+ G
Sbjct: 134 RFGLASHLGVLTGLPTIGVAKNPF---GFRHADPGPL-------RGDWSPLLDGAEEV-G 182
Query: 244 VAMRSTPDTLKPIFISVGHCISL-DTAVMIVKMTCKYRVPEPIRQADIRSR 293
A+R T D +KP+F+SVGH +++ D + + +R PE R+AD R
Sbjct: 183 RALR-TRDGVKPLFVSVGHRVTIADACAYTLHLARDFRQPETTRRADALCR 232
>gi|307129000|ref|YP_003881016.1| endonuclease V [Dickeya dadantii 3937]
gi|306526529|gb|ADM96459.1| endonuclease V (deoxyinosine 3'endoduclease) [Dickeya dadantii
3937]
Length = 224
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/221 (36%), Positives = 113/221 (51%), Gaps = 40/221 (18%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQ--VPYVPGFLAFREAPVLL 154
I G D+ F ++D ++ + VL +LQ+V +Y + R+ +PY+PGFL+FRE P LL
Sbjct: 31 IAGADVGF-EQDGAVTRAALAVLTYPSLQLV--EYQIARIPTIMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGL 212
+ + ++ R P +L VDG+G+ HPR G+ASH G+L N+ TIGV K L
Sbjct: 88 AAWEQLQHR-----PDLLFVDGHGVSHPRRLGVASHFGLLVNVPTIGVAKRRLCGQFAPL 142
Query: 213 THS-GVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
+ G RQ LLD E G W R P+F+S GH I +D+A+
Sbjct: 143 EDAVGSRQPLLDKDEQ-----------IGWVWRSKARCN-----PLFVSTGHRIGVDSAL 186
Query: 271 MIVKMTC--KYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
V M C YR+PEP R AD + + QRWQ
Sbjct: 187 QWV-MRCMNGYRLPEPTRWADAVA-------SNRPAFQRWQ 219
>gi|15893654|ref|NP_347003.1| deoxyinosine 3'endonuclease [Clostridium acetobutylicum ATCC 824]
gi|337735576|ref|YP_004635023.1| deoxyinosine 3'endonuclease [Clostridium acetobutylicum DSM 1731]
gi|384457087|ref|YP_005669507.1| Deoxyinosine 3'endonuclease [Clostridium acetobutylicum EA 2018]
gi|56404422|sp|Q97M37.1|NFI_CLOAB RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|15023211|gb|AAK78343.1|AE007551_2 Deoxyinosine 3'endonuclease [Clostridium acetobutylicum ATCC 824]
gi|325507776|gb|ADZ19412.1| Deoxyinosine 3'endonuclease [Clostridium acetobutylicum EA 2018]
gi|336290064|gb|AEI31198.1| deoxyinosine 3'endonuclease [Clostridium acetobutylicum DSM 1731]
Length = 234
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 20/209 (9%)
Query: 87 KEEEEVLLKYIGGVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFL 145
KEE+ +K GVD+++ +K + CI+V+D T +I+ + Y ++VPY+PGFL
Sbjct: 35 KEED---IKLCAGVDLAYWTKGEKQYGVCCIIVIDYNTGEIIEKAYDYGEIEVPYMPGFL 91
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
AFRE P+++ + +K P + M DGNG LH G+A+H N TIGV K+
Sbjct: 92 AFRELPLVIKTVKKLKNE-----PDIFMFDGNGYLHYNHMGIATHASFFLNKPTIGVAKS 146
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
V G+ ++ ++ E +DI+ + +G +R+ D +KPIF+S G+ I
Sbjct: 147 YLKVAGVDF----EMPESFEGAFKDIVI----NEEVYGRVLRTKKD-VKPIFVSCGNYID 197
Query: 266 LDTAVMIVK--MTCKYRVPEPIRQADIRS 292
L+T I + R+P +R AD+ +
Sbjct: 198 LETCTKICSKLINNDSRLPITVRLADLET 226
>gi|228998015|ref|ZP_04157616.1| Endonuclease V [Bacillus mycoides Rock3-17]
gi|229005572|ref|ZP_04163282.1| Endonuclease V [Bacillus mycoides Rock1-4]
gi|228755672|gb|EEM05007.1| Endonuclease V [Bacillus mycoides Rock1-4]
gi|228761748|gb|EEM10693.1| Endonuclease V [Bacillus mycoides Rock3-17]
Length = 238
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 34/242 (14%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF-SKEDPSIA 112
+++EIQD+L R+ ++ F E+V L I GVD+++ K+D
Sbjct: 16 EFSEIQDKLIHRIELKNNFHL---------------EDVSL--IAGVDLAYWEKDDKHYG 58
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
CIVV+D T + V + YS + VPY+PGFLAFRE P+++ + P +
Sbjct: 59 TCCIVVIDYHTKKEVEKVYSYGEVTVPYIPGFLAFRELPLVIEAAKKLTSN-----PDIF 113
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
M DGNG LH + G+A+H TIGV K+ + + + + K DI+
Sbjct: 114 MFDGNGYLHYKHMGIATHASFFLQKPTIGVAKSYLKIKDVDFI----MPENKAFTFSDIM 169
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK--MTCKYRVPEPIRQADI 290
+G +R+ D +KPIF+S G+ I LDT++ IV + + R+P P+R AD+
Sbjct: 170 I----DDEVYGRVLRTKED-VKPIFVSCGNNIDLDTSIQIVSNLIGKESRLPIPVRLADL 224
Query: 291 RS 292
+
Sbjct: 225 ET 226
>gi|325103387|ref|YP_004273041.1| deoxyribonuclease V [Pedobacter saltans DSM 12145]
gi|324972235|gb|ADY51219.1| Deoxyribonuclease V [Pedobacter saltans DSM 12145]
Length = 232
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 112/214 (52%), Gaps = 24/214 (11%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+SF+K + ++ G IV+L L+I+ + + + PY+ G LAFRE P LL +
Sbjct: 37 IGGADISFNKYEDTVYAG-IVILSYPDLKIIEQATVIGKSNFPYISGLLAFREVPTLLEV 95
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ +K + P V+++DG G+ H R G+ASH GVL N +TIG GK+ + G
Sbjct: 96 YEKLKNK-----PDVMVLDGQGIAHRRRTGIASHFGVLTNTSTIGCGKS--RLFGTFIEP 148
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
Q E LM + G +RS + KP+FIS G+ ++ A+ I+K
Sbjct: 149 ANQKFAESE--------LMDKT-ERIGTVLRSKINC-KPLFISPGNLLTNQEAIEIIKNC 198
Query: 277 CK-YRVPEPIRQA-----DIRSRDYLQKHQSTCL 304
K YR+PEP R A DIR ++ Q + T
Sbjct: 199 IKSYRIPEPTRLAHLLVNDIRIKNSKQDNTQTLF 232
>gi|392553618|ref|ZP_10300755.1| endonuclease V [Pseudoalteromonas spongiae UST010723-006]
Length = 221
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 27/208 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIV----YEDYSLLRLQVPYVPGFLAFRE 149
++YI G+D++F + + IVVL +L++V YE ++ +PY+PG L+FRE
Sbjct: 36 VRYIAGIDVAFPNKGKTTRA-AIVVLSFPSLEVVELTVYEAPTV----IPYIPGVLSFRE 90
Query: 150 APVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHV 209
+LS L +K P VLM DG G+ HP G G+ASHIGV+ N+ T+G+ K
Sbjct: 91 GGAILSALAQLKT-----LPDVLMFDGQGIAHPLGLGVASHIGVILNVPTLGIAK----- 140
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
S + D E I L+ + G +RS D +KP+F+S GH I+ + A
Sbjct: 141 -----SCLVGKFDEPELTKGSISDLVINYKKS-GYVVRSR-DKVKPLFVSPGHLITKEQA 193
Query: 270 V-MIVKMTCKYRVPEPIRQADIRSRDYL 296
+ + ++ KYR+PEP R AD S++ +
Sbjct: 194 LQLALQCVTKYRLPEPTRLADKLSKNQM 221
>gi|402813779|ref|ZP_10863374.1| endonuclease V [Paenibacillus alvei DSM 29]
gi|402509722|gb|EJW20242.1| endonuclease V [Paenibacillus alvei DSM 29]
Length = 243
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 115/216 (53%), Gaps = 23/216 (10%)
Query: 94 LKYIGGVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+K+I G+D+++ + + A CIV +D ++ QIV Y + VPY+ G+L+FRE P+
Sbjct: 42 IKFISGIDLAYWENNNETYAVCCIVTIDYESHQIVETKYLSGEITVPYIAGYLSFRELPL 101
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+L ++ P ++M DGNG LH R G+A+H + TIGV K+ ++ +
Sbjct: 102 ILETYKLLEIE-----PDIIMFDGNGFLHYRNMGIATHASFYLHKPTIGVAKSYLKIENV 156
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+ LD + II + +G +R +KPIFIS G+ I +DTA I
Sbjct: 157 EY---HMPLDEDRAFTDIII-----HSTVYGRTLRPHKG-VKPIFISCGNWIDIDTATDI 207
Query: 273 VKMTC---KYRVPEPIRQADIRSRD----YLQKHQS 301
V + C + R P PIR ADI +R ++++H+S
Sbjct: 208 V-LNCINQESRQPIPIRLADIETRKMREVFMREHKS 242
>gi|359458262|ref|ZP_09246825.1| endonuclease V [Acaryochloris sp. CCMEE 5410]
Length = 229
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 103/197 (52%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ GVD+ F + + I VL L++ + PY+PG L+FRE P +
Sbjct: 36 VRFVAGVDVGFEDQGKTTRAA-IAVLTWPELKLHETTIARQPTSFPYIPGLLSFREIPTV 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L ++ P +L+ DG GL HPR FG+A H+GVL +L IGV K+
Sbjct: 95 LAALAQIQT-----TPDLLLCDGQGLAHPRRFGIACHLGVLVDLPAIGVAKS-------R 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G + +D N + +I G +R+ P T KP++IS+GH ISLD A+ +
Sbjct: 143 LVGKHEPVDQTRGNWQPLI----DKDERIGAVLRTRPKT-KPLYISLGHRISLDCAIEYV 197
Query: 273 VKMTCKYRVPEPIRQAD 289
+ T +YR+PE R AD
Sbjct: 198 MSCTTRYRLPETTRWAD 214
>gi|401761759|ref|YP_006576766.1| endonuclease V [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400173293|gb|AFP68142.1| endonuclease V [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 223
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 27/200 (13%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ + +VVL +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 QYIGGADVGF-EQGGEVTRAAMVVLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWKQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAK---------- 132
Query: 215 SGVRQLLDAKENNNED---IIPLM-GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
++L A E + + + PL+ G W + + P+FI+ GH +S+D+A+
Sbjct: 133 ---KRLCGAFEPLSPEPGALAPLIHKGEQLAW---VWRSKARCNPLFIATGHRVSMDSAL 186
Query: 271 MIVKMTCK-YRVPEPIRQAD 289
V+ K YR+PEP R AD
Sbjct: 187 AWVQRCMKGYRLPEPTRWAD 206
>gi|345852482|ref|ZP_08805421.1| endonuclease V [Streptomyces zinciresistens K42]
gi|345636055|gb|EGX57623.1| endonuclease V [Streptomyces zinciresistens K42]
Length = 232
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 120/245 (48%), Gaps = 36/245 (14%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIV 117
+QD L+ RL+ ++ P T T GVD+++ E + V
Sbjct: 20 VQDGLRARLVLDE---PGPPPGTGRVT--------------GVDVAYDDER-DVVAAAAV 61
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
VLD +L++V E ++ R+ PYVPG LAFRE P +L+ LD + P +++ DG
Sbjct: 62 VLDAASLEVVAEATAVGRIPFPYVPGLLAFREIPAVLAALDALP-----CPPGLVVCDGY 116
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
GL HPR FGLASH+GVL L TIGV KN D PL+ G
Sbjct: 117 GLAHPRRFGLASHLGVLTGLPTIGVAKNPFTFT----------CDPPGPGRGASSPLLAG 166
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYL 296
G A+R T D +KP+++SVGH +L A + +T YR+PE R+AD R L
Sbjct: 167 E-EEVGRALR-TRDGVKPVYVSVGHRTTLSGACAHTLALTPAYRLPETTRRADALCRRAL 224
Query: 297 QKHQS 301
+ +
Sbjct: 225 RTATA 229
>gi|312170811|emb|CBX79072.1| endonuclease V (deoxyinosine 3'endoduclease) [Erwinia amylovora
ATCC BAA-2158]
Length = 221
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 20/201 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F + + +V+L+ +LQ++ + + +PY+PGFL+FRE P L
Sbjct: 29 RFIGGADVGFEQSG-EVTRAALVILEYPSLQLIEHQVARIATTMPYIPGFLSFREIPALE 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + +R P +L+VDG+G+ HPR G+ASH G+LA++ TIGV K
Sbjct: 88 AAWQQLAQR-----PDLLLVDGHGIAHPRRLGVASHFGLLADVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
G DA + + PLM + G +RS P+FIS GH +S TA+ +
Sbjct: 136 CGQFTPPDADPGSCQ---PLM-DTAQQLGWVLRSK-SRCNPLFISPGHRVSQATALDWVQ 190
Query: 274 KMTCKYRVPEPIRQAD-IRSR 293
K YR+PEP R AD I SR
Sbjct: 191 KCLHGYRLPEPTRWADAIASR 211
>gi|254166814|ref|ZP_04873668.1| Endonuclease V family [Aciduliprofundum boonei T469]
gi|289596132|ref|YP_003482828.1| methylated-DNA/protein-cysteine methyltransferase [Aciduliprofundum
boonei T469]
gi|197624424|gb|EDY36985.1| Endonuclease V family [Aciduliprofundum boonei T469]
gi|289533919|gb|ADD08266.1| methylated-DNA/protein-cysteine methyltransferase [Aciduliprofundum
boonei T469]
Length = 303
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 124/236 (52%), Gaps = 39/236 (16%)
Query: 65 RLITEDFFTWNLPNSTTTNTSTKEEEEVLLK-----YIGGVDMSFSKEDPSIACGCIVVL 119
+++ EDF T + P + ++V+L+ IGGVD+S+S + +A +V++
Sbjct: 96 KVLFEDFKT-DYPLKKLRKEQEELRKKVILEDAHPSLIGGVDVSYSSRNAYVA---LVIM 151
Query: 120 DLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGL 179
+++ E +R+ PY+P +LAFRE P++L +L + +LM+DGNG+
Sbjct: 152 RDGKYEVIGEK---MRVDFPYIPTYLAFREEPIILEILKKVDDDI------LLMIDGNGI 202
Query: 180 LHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSG 239
LHPR GLA+++GV N+ TIGV K+L + ++ + K ++ SG
Sbjct: 203 LHPRFMGLATYVGVKNNVATIGVAKSLL---------MGEVREGKVYIGSQLVGQYIQSG 253
Query: 240 STWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDY 295
G I++S GH I+LD+AV +VK KY+ PEP+R A I + +
Sbjct: 254 RKKG------------IYVSPGHRITLDSAVRVVKKYLKYKNPEPLRLAHIYANKF 297
>gi|126179875|ref|YP_001047840.1| deoxyribonuclease V [Methanoculleus marisnigri JR1]
gi|125862669|gb|ABN57858.1| Endonuclease V [Methanoculleus marisnigri JR1]
Length = 234
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ + G D S++K I +V L L +V + PY+PG L FRE P L
Sbjct: 36 VSLVAGTDASYAKGSDVIHA-VVVALSYPDLTVVERVSAAAVTTFPYIPGLLTFREGPAL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L ++ P V+ DG G+ HPRG G+ASH+GVL + IGV K+L
Sbjct: 95 LEAFRRLRSE-----PDVVFFDGQGIAHPRGLGIASHMGVLLDRPAIGVAKSLLLGTAAE 149
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
+G R ++E T G+A+R T + +KP+++SVGH I L AV +V
Sbjct: 150 PAGERGSTAPILRDDE-----------TIGMAVR-TRERVKPVYVSVGHRIDLAQAVDLV 197
Query: 274 KMTCK-YRVPEPIRQADI 290
T + YR+PEP RQA +
Sbjct: 198 LATARGYRLPEPTRQAHL 215
>gi|223975613|gb|ACN31994.1| unknown [Zea mays]
Length = 94
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%), Gaps = 4/89 (4%)
Query: 164 ANHFYP----QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
A+ FY Q+LMVDGNGLLHPRGFGLA H+GVLA++ TIGVGKNLH VDGL S VR+
Sbjct: 6 AHRFYHSALLQLLMVDGNGLLHPRGFGLACHLGVLADIPTIGVGKNLHQVDGLNQSEVRR 65
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRS 248
LL +KEN N +++ L G SG+ WG+ + S
Sbjct: 66 LLGSKENCNRELVLLTGQSGTKWGMVILS 94
>gi|294508831|ref|YP_003572890.1| endonuclease V [Salinibacter ruber M8]
gi|294345160|emb|CBH25938.1| Endonuclease V [Salinibacter ruber M8]
Length = 291
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 118/244 (48%), Gaps = 36/244 (14%)
Query: 53 NQWTEIQDELKK--RLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
+ W DE K+ R + + LP+ T + G+D+S +
Sbjct: 78 HDWNVSTDEAKRIQRRLASEVTERALPDGVET--------------VAGIDVSVRDD--- 120
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
A + VL L L +V E + PYVPG L+FRE P +L L+ + H P
Sbjct: 121 TAQAAVSVLRLPELDVVDEATHRCEVPFPYVPGLLSFREMPAVLPALERL-----HSTPD 175
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
V + D +G HPR FGLA H+GVL + IGV K++ L + +L K +
Sbjct: 176 VFVTDSHGAAHPRRFGLACHLGVLLDAPAIGVAKSI-----LVGAPQGELGPEKGSR--- 227
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+PL+ G T G +R+ D + P+++SVGH +LD A +++ + +Y++PEP RQA
Sbjct: 228 -VPLV-DDGETVGTVLRTRTD-VNPVYVSVGHRCTLDGAADLMLDCSPRYKIPEPTRQAH 284
Query: 290 IRSR 293
SR
Sbjct: 285 KLSR 288
>gi|365968525|ref|YP_004950086.1| endonuclease V [Enterobacter cloacae EcWSU1]
gi|365747438|gb|AEW71665.1| Endonuclease V [Enterobacter cloacae EcWSU1]
Length = 224
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YIGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL
Sbjct: 31 QYIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 89
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 AAWEQLSQK-----PNLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 137
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ +I W R P+FI+ GH +S D+A+ V+
Sbjct: 138 CGAFEPLSAEPGALAPLIDKGEQLAWVWRSKARCN-----PLFIATGHRVSTDSALAWVQ 192
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 RCMKGYRLPEPTRWAD 208
>gi|238785561|ref|ZP_04629542.1| Endonuclease V [Yersinia bercovieri ATCC 43970]
gi|238713546|gb|EEQ05577.1| Endonuclease V [Yersinia bercovieri ATCC 43970]
Length = 239
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 111/221 (50%), Gaps = 36/221 (16%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F ++ + I +L +L++V + + +PY+PG L+FRE P L
Sbjct: 34 VRFIAGADVGFEQQG-EVTRAAIAILRYPSLELVEYQIARVETSLPYIPGLLSFREYPAL 92
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDG 211
L+ +++R P+++ VDG G+ HPR G+ASH G+L ++ TIGV K+ H
Sbjct: 93 LAAWAQLQQR-----PELVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGHFQP 147
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
L E+ N + PL+ G G W R P+FIS GH +S+ +
Sbjct: 148 L------------ESANGAVQPLIDGDEQLGWVWRSKTRCN-----PLFISPGHRVSVAS 190
Query: 269 AVMIV-KMTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
A+ V + YR+PEP R AD + + Q QRW
Sbjct: 191 ALTWVQRCMAGYRLPEPTRWADAIASNRPQ-------FQRW 224
>gi|397779499|ref|YP_006543972.1| deoxyribonuclease V [Methanoculleus bourgensis MS2]
gi|396938001|emb|CCJ35256.1| deoxyribonuclease V [Methanoculleus bourgensis MS2]
Length = 233
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 104/218 (47%), Gaps = 31/218 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ + G D S++K I V L L +V + PY+PG L FRE P L
Sbjct: 36 ISLMAGADASYTKGSNEIYA-VAVALRYPDLTVVERVSARTTTSFPYIPGLLTFREGPAL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ ++ P V+ DG G+ HPRG G+ASH+GVL + T+GV K+L
Sbjct: 95 IEAFGRLQSE-----PDVIFFDGQGIAHPRGLGIASHMGVLLDRPTVGVAKSL------- 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGS------GSTWGVAMRSTPDTLKPIFISVGHCISLD 267
D P G + G T G+A+R+ T KP+++SVGH I+L
Sbjct: 143 ----------LVGTAADPGPARGSASPVRRDGETIGMAVRTKAGT-KPVYVSVGHRIALA 191
Query: 268 TAVMIVKMTCK-YRVPEPIRQADIRSRDYLQKHQSTCL 304
AV +V T + YR+PEP RQA + + + + + T L
Sbjct: 192 QAVDLVLATTRGYRLPEPTRQAHLFANEVRRGGRQTTL 229
>gi|238765542|ref|ZP_04626456.1| Endonuclease V [Yersinia kristensenii ATCC 33638]
gi|238696237|gb|EEP89040.1| Endonuclease V [Yersinia kristensenii ATCC 33638]
Length = 224
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 112/220 (50%), Gaps = 34/220 (15%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F ++ + I +L +L++V + + +PY+PG L+FRE P L
Sbjct: 29 VRFIAGADVGFEQQG-EVTRAAIAILHYPSLELVEYQVARVATSLPYIPGLLSFREYPAL 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVD- 210
L+ +++R PQ++ VDG G+ HPR G+ASH G+L ++ TIGV K+ H +
Sbjct: 88 LAAWKLLQQR-----PQLVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGHFEP 142
Query: 211 -GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
G + ++ L DA E G W R P+FIS GH +S+ +A
Sbjct: 143 LGNDNGALQPLFDADEQ-----------LGWVWRSKARCN-----PLFISPGHRVSVGSA 186
Query: 270 VMIVKM-TCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
+ V++ YR+PEP R AD + + Q QRW
Sbjct: 187 LEWVQLCMAGYRLPEPTRWADAIASNRPQ-------FQRW 219
>gi|354585355|ref|ZP_09004243.1| Deoxyribonuclease V [Paenibacillus lactis 154]
gi|353188830|gb|EHB54348.1| Deoxyribonuclease V [Paenibacillus lactis 154]
Length = 225
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 116/215 (53%), Gaps = 19/215 (8%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
KE+ ++Y+ GVD+++S+++ + + +L+ +L +V + PY+PG +
Sbjct: 29 KEDALEPVRYVAGVDVAYSEQNDKL-IAAVAILEADSLTLVDTVMVEESVSFPYIPGLFS 87
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P ++ + + PQ+++ DG GL HPR FGLA H+GVL ++ TIG GK
Sbjct: 88 FRELPPIMKAFEQIS-----ILPQLIVCDGQGLAHPRRFGLACHLGVLYDIPTIGCGKT- 141
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
L+ S V D + + PLM G +R T D + P+F+S+GH ISL
Sbjct: 142 ----KLSGSYVEP--DIQRGSYS---PLM-DQHEIIGNVLR-TQDGVNPVFVSIGHRISL 190
Query: 267 DTAV-MIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
TA I+K++ +R+PE RQAD R L+ Q
Sbjct: 191 ATACEWILKLSPTFRLPETTRQADQIVRKGLKLTQ 225
>gi|292486745|ref|YP_003529615.1| endonuclease V [Erwinia amylovora CFBP1430]
gi|292897976|ref|YP_003537345.1| endonuclease V [Erwinia amylovora ATCC 49946]
gi|428783673|ref|ZP_19001167.1| endonuclease V (deoxyinosine 3'endoduclease) [Erwinia amylovora
ACW56400]
gi|291197824|emb|CBJ44919.1| endonuclease V [Erwinia amylovora ATCC 49946]
gi|291552162|emb|CBA19199.1| endonuclease V (deoxyinosine 3'endoduclease) [Erwinia amylovora
CFBP1430]
gi|426277848|gb|EKV55572.1| endonuclease V (deoxyinosine 3'endoduclease) [Erwinia amylovora
ACW56400]
Length = 221
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 20/201 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F + + +V+L+ +LQ++ + + +PY+PGFL+FRE P L
Sbjct: 29 RFIGGADVGFEQSG-EVTRAALVILEYPSLQLIEHQVARIATTMPYIPGFLSFREIPALE 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + +R P +L+VDG+G+ HPR G+ASH G+LA++ TIGV K
Sbjct: 88 AAWQQLAQR-----PDLLLVDGHGIAHPRRLGVASHFGLLADVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
G DA + + PLM + G +RS P+FIS GH +S TA+ +
Sbjct: 136 CGQFTPPDADPGSCQ---PLM-DTDQQLGWVLRSK-SRCNPLFISPGHRVSQATALDWVQ 190
Query: 274 KMTCKYRVPEPIRQAD-IRSR 293
K YR+PEP R AD I SR
Sbjct: 191 KCLHGYRLPEPTRWADAIASR 211
>gi|421494709|ref|ZP_15942052.1| hypothetical protein MU9_3223 [Morganella morganii subsp. morganii
KT]
gi|455737864|ref|YP_007504130.1| Endonuclease V [Morganella morganii subsp. morganii KT]
gi|400191052|gb|EJO24205.1| hypothetical protein MU9_3223 [Morganella morganii subsp. morganii
KT]
gi|455419427|gb|AGG29757.1| Endonuclease V [Morganella morganii subsp. morganii KT]
Length = 247
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 25/199 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YI GVD+ F ++ ++ +V+L L++ + + Q+PY+PG L+FRE P L
Sbjct: 30 RYIAGVDIGF-EDGGNVTRAAVVILTWPELEVAEYQTARIPTQLPYIPGLLSFREIPAAL 88
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGL 212
+ + + + P +++VDG G HPR G+A H+GVL +L IGV K+ + L
Sbjct: 89 AAWEKLTLK-----PDLVLVDGQGRAHPRRLGVAGHLGVLLDLPAIGVAKSRLCGTFEPL 143
Query: 213 T-HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
T +G + LL K G G RS + P+FIS GH +S+DTA+
Sbjct: 144 TEEAGAQSLLTDK--------------GEPLGWVWRSK-NRCNPLFISPGHHMSIDTALT 188
Query: 272 IVK-MTCKYRVPEPIRQAD 289
VK +T YR+PEP R AD
Sbjct: 189 WVKALTRGYRLPEPTRWAD 207
>gi|448240067|ref|YP_007404120.1| endonuclease V [Serratia marcescens WW4]
gi|445210431|gb|AGE16101.1| endonuclease V [Serratia marcescens WW4]
Length = 225
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 107/211 (50%), Gaps = 25/211 (11%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E ++ I +L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 28 FIAGADVGFEQEG-AVTRAAIAILRYPSLELVEYQVARIATVMPYIPGFLSFREYPALLA 86
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 87 AWAQLRQK-----PGLIFVDGHGVSHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFAPLD 141
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-K 274
L E+ E + G W R P+FIS GH + D+A++ V +
Sbjct: 142 AAVGALAPLEDKGEQL-------GWVWRSKARCN-----PLFISTGHRVGADSALVWVQR 189
Query: 275 MTCKYRVPEPIRQAD-IRSR-----DYLQKH 299
YR+PEP R AD I SR +LQ+H
Sbjct: 190 CMAGYRLPEPTRWADAIASRRPAFQRWLQQH 220
>gi|83814646|ref|YP_446892.1| endonuclease V [Salinibacter ruber DSM 13855]
gi|83756040|gb|ABC44153.1| endonuclease V [Salinibacter ruber DSM 13855]
Length = 222
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 118/244 (48%), Gaps = 36/244 (14%)
Query: 53 NQWTEIQDELKK--RLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
+ W DE K+ R + + LP+ T + G+D+S +
Sbjct: 9 HDWNVSTDEAKRIQRRLASEVTERALPDGGET--------------VAGIDVSVRDD--- 51
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
A + VL L L +V E + PYVPG L+FRE P +L L+ + H P
Sbjct: 52 TAQAAVSVLRLPELDVVDEATHRCEVPFPYVPGLLSFREMPAVLPALERL-----HSTPD 106
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
V + D +G HPR FGLA H+GVL + IGV K++ L + +L K +
Sbjct: 107 VFVTDSHGAAHPRRFGLACHLGVLLDAPAIGVAKSI-----LVGAPQGELGPEKGSR--- 158
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+PL+ G T G +R+ D + P+++SVGH +LD A +++ + +Y++PEP RQA
Sbjct: 159 -VPLV-DDGETVGTVLRTRTD-VNPVYVSVGHRCTLDGAADLMLDCSPRYKIPEPTRQAH 215
Query: 290 IRSR 293
SR
Sbjct: 216 KLSR 219
>gi|444912848|ref|ZP_21233007.1| Endonuclease V [Cystobacter fuscus DSM 2262]
gi|444716541|gb|ELW57387.1| Endonuclease V [Cystobacter fuscus DSM 2262]
Length = 234
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 113/237 (47%), Gaps = 37/237 (15%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
Q +Q ELK+R++ W + + + G D+S S+ + A
Sbjct: 14 TQAVALQRELKERVVLRPPRGWKV------------------ERVAGADISMSRGE-DWA 54
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
G VVLD +T + V ++ RL PYVPG L+FRE PVL+ ++ R P V+
Sbjct: 55 SGGFVVLDAETREPVARASAVTRLGFPYVPGLLSFRELPVLMEAWARLEVR-----PDVI 109
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
+ DG G HPR GLA H G+L + +IG K+L G L + DI+
Sbjct: 110 IFDGQGTAHPRRLGLACHGGLLFGVPSIGCAKSL-------LVGKHGPLGEERGAVADIL 162
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
G G A+R+ L P+++S GH + L TAV +++MT +YR PE R A
Sbjct: 163 ----HQGEVVGRAVRTRRGVL-PVYVSPGHLMDLPTAVEWVLRMTSRYREPETTRHA 214
>gi|329296842|ref|ZP_08254178.1| endonuclease V [Plautia stali symbiont]
Length = 222
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 104/197 (52%), Gaps = 21/197 (10%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F ++ + +V+L+ +L +V + + +PY+PGFL+FRE P L
Sbjct: 29 RFIGGADVGF-EQGGEVTRAALVILEYPSLTLVEHRIARVATTMPYIPGFLSFREVPALQ 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + +R P +L VDG+G+ HPR G+A+H G L ++ TIGV K
Sbjct: 88 AAWQQLSQR-----PDLLFVDGHGISHPRRLGVAAHFGSLLDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMG-GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G LDA + + PLM G W + + P+F+S GH +SLD+A+ V
Sbjct: 136 CGRFAELDAAPGSRQ---PLMDKGEQIAW---VWRSKTRCNPLFVSTGHRVSLDSALHWV 189
Query: 274 KM-TCKYRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 190 EACMAGYRLPEPTRWAD 206
>gi|134097929|ref|YP_001103590.1| deoxyribonuclease V [Saccharopolyspora erythraea NRRL 2338]
gi|133910552|emb|CAM00665.1| deoxyribonuclease V [Saccharopolyspora erythraea NRRL 2338]
Length = 178
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 104/199 (52%), Gaps = 24/199 (12%)
Query: 102 MSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMK 161
M++ E + + VLD+ TL +V + + PYVPG AFREAP LL L +
Sbjct: 1 MAYRDESDEL-VAAVTVLDVATLSVVDSAVVRGKAEFPYVPGLFAFREAPSLLQALAELS 59
Query: 162 KRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDGLTHSGVRQ 219
P VL+ DG GL HPR FGLA H+GVL ++ +IGVGK H+ G
Sbjct: 60 -----VEPDVLVCDGQGLAHPRRFGLACHLGVLTDVPSIGVGKTAMGHYEPPGEERGAWT 114
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCK 278
L +++++ G A+R T +KP+F+SVGH +LD A +++++ K
Sbjct: 115 PL----RLDDEVV----------GRALR-TQRGVKPVFVSVGHRFTLDAACDLVLRLAPK 159
Query: 279 YRVPEPIRQADIRSRDYLQ 297
YR+PE R AD R L+
Sbjct: 160 YRLPETTRTADHLGRSALR 178
>gi|453066193|gb|EMF07144.1| endonuclease V [Serratia marcescens VGH107]
Length = 228
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 106/211 (50%), Gaps = 25/211 (11%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E ++ I +L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-AVTRAAIAILRYPSLELVEYQVARIATVMPYIPGFLSFREYPALLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 AWAQLRQK-----PGLIFVDGHGVSHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFAPLD 144
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-K 274
L E+ E + G W R P+FIS GH + D+A+ V +
Sbjct: 145 AAVGALAPLEDKGEQL-------GWVWRSKARCN-----PLFISTGHRVGADSALAWVQR 192
Query: 275 MTCKYRVPEPIRQAD-IRSR-----DYLQKH 299
YR+PEP R AD I SR +LQ+H
Sbjct: 193 CMAGYRLPEPTRWADAIASRRPAFQRWLQQH 223
>gi|451335585|ref|ZP_21906152.1| Endonuclease V [Amycolatopsis azurea DSM 43854]
gi|449421990|gb|EMD27381.1| Endonuclease V [Amycolatopsis azurea DSM 43854]
Length = 226
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 115/251 (45%), Gaps = 45/251 (17%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
Q EIQ+ L+ + ED P T T G+D+++ + IA
Sbjct: 14 GQAIEIQETLRGLVDPED----RCPQEIATVT--------------GLDVAYDEGSGLIA 55
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
V L++ ++V + + + PY PG AFRE P LL L RA P +L
Sbjct: 56 AAA-VTLEIAGFRVVEKRTVVSEVSFPYEPGLFAFRELPPLLDAL-----RALDHVPDLL 109
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHVDGLTHSGVRQLLDAKENNN 228
+ DG+GL HPR FGLA H+GV+ L +IGVGK H G LLD
Sbjct: 110 VCDGHGLAHPRRFGLACHVGVVTGLPSIGVGKTRFIGEHDEPGAERGSRAPLLD------ 163
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQ 287
G G +R T +KP+++SVGH ISLD A ++++ +R PE R
Sbjct: 164 ---------DGEVIGAVLR-TQGGVKPVYVSVGHKISLDNACRQVLRLCPAFRQPETTRH 213
Query: 288 ADIRSRDYLQK 298
AD RD L++
Sbjct: 214 ADRLCRDALKE 224
>gi|228991901|ref|ZP_04151837.1| Endonuclease V [Bacillus pseudomycoides DSM 12442]
gi|228767630|gb|EEM16257.1| Endonuclease V [Bacillus pseudomycoides DSM 12442]
Length = 238
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 122/242 (50%), Gaps = 34/242 (14%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF-SKEDPSIA 112
+++EIQD+L R+ ++ F E+V L I GVD+++ K+D
Sbjct: 16 EFSEIQDKLIHRIELKNNFHL---------------EDVSL--IAGVDLAYWEKDDKHYG 58
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
CIVV++ T + V + YS + VPY+PGFLAFRE P+++ + P +
Sbjct: 59 TCCIVVIEYHTKKEVEKVYSYGEVTVPYIPGFLAFRELPLVIEAAKKLTSN-----PDIF 113
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDII 232
M DGNG LH + G+A+H TIGV K+ + + + + K DI+
Sbjct: 114 MFDGNGYLHYKHMGIATHASFFLQKPTIGVAKSYLKIKDVDFI----MPENKAFTFSDIM 169
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK--MTCKYRVPEPIRQADI 290
+G +R T + +KPIF+S G+ I LDT++ IV + + R+P P+R AD+
Sbjct: 170 I----DDEVYGRVLR-TKENVKPIFVSCGNNIDLDTSIQIVSNLIGKESRLPIPVRLADL 224
Query: 291 RS 292
+
Sbjct: 225 ET 226
>gi|256375594|ref|YP_003099254.1| deoxyribonuclease V [Actinosynnema mirum DSM 43827]
gi|255919897|gb|ACU35408.1| Deoxyribonuclease V [Actinosynnema mirum DSM 43827]
Length = 232
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 92/174 (52%), Gaps = 27/174 (15%)
Query: 130 DYSLLRLQV--PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGL 187
D S++R PYVPG AFRE P LL+ LD + P +L+ DG GL HPR FGL
Sbjct: 80 DTSVVRATADFPYVPGLFAFRELPSLLTALDRLAT-----TPDLLVCDGQGLAHPRRFGL 134
Query: 188 ASHIGVLANLTTIGVGKN-LHHVD--GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGV 244
A H+GVLA+L ++GV K + H + G LLD G G
Sbjct: 135 ACHLGVLADLPSVGVAKTPMGHFERPGPARGASTDLLD---------------DGEVVGR 179
Query: 245 AMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQADIRSRDYLQ 297
A+R T +KP+F+SVGH I LD A V C+ YR+PE R+AD R +L+
Sbjct: 180 ALR-TRAGVKPVFVSVGHRIDLDRACAEVLRLCRDYRLPETTRRADALGRRHLR 232
>gi|147918940|ref|YP_687334.1| putative endonuclease V [Methanocella arvoryzae MRE50]
gi|110622730|emb|CAJ38008.1| putative endonuclease V [Methanocella arvoryzae MRE50]
Length = 206
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 106/201 (52%), Gaps = 38/201 (18%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
LKY+ G+D S+ ++ + G VV+DL TL+ + + + LL+L PY+PG LA+REA +
Sbjct: 26 LKYVAGIDCSYYED---LIIGGAVVIDLNTLEPIEKAHVLLKLDFPYIPGLLAYREANAM 82
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+S + + VLM+DG G HPR G+A+ IGV + +IGVGK+ D
Sbjct: 83 ISAFKKLDTVVD-----VLMIDGFGTNHPRRCGIATQIGVRLEMPSIGVGKSFLCGD--- 134
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS-----TPDTLKPIFISVGHCISLDT 268
+G G + A R+ +P + KPI++S GH ISL+T
Sbjct: 135 ---------------------IGDDGYVYQGAERTGKLIYSPRSKKPIYVSPGHRISLET 173
Query: 269 AVMIVKMTCKY-RVPEPIRQA 288
+V +VK K R+PEP R A
Sbjct: 174 SVELVKKCMKSGRIPEPTRLA 194
>gi|256423068|ref|YP_003123721.1| deoxyribonuclease V [Chitinophaga pinensis DSM 2588]
gi|256037976|gb|ACU61520.1| Deoxyribonuclease V [Chitinophaga pinensis DSM 2588]
Length = 232
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 110/201 (54%), Gaps = 29/201 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAP 151
L I G D+SF+K ++ G I++ L I YSL++ +V PYVPG+LAFRE P
Sbjct: 34 LSIIAGADISFNKFSTTVYAGIILLSFPDLLPI---GYSLIKKEVLFPYVPGYLAFREVP 90
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HH 208
L+ +N+ ++ P +L+VDG+G+ HPR G+ASH GV A+ TIG K L +
Sbjct: 91 PLMDAWENLPQK-----PDLLVVDGHGIAHPRRMGIASHFGVSADTPTIGCAKTLLCGQY 145
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
+ + +G L K NE + G +R T + +KP+F+S GH I +
Sbjct: 146 EEPASTTGSSSPLIYK---NEVV-----------GAVLR-TKNAVKPVFVSPGHKIDVPD 190
Query: 269 AVMIVKMTC-KYRVPEPIRQA 288
+V I+K +YR+PEP R A
Sbjct: 191 SVDIIKQCIGRYRIPEPTRLA 211
>gi|293394034|ref|ZP_06638338.1| deoxyribonuclease V [Serratia odorifera DSM 4582]
gi|291423474|gb|EFE96699.1| deoxyribonuclease V [Serratia odorifera DSM 4582]
Length = 228
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 106/200 (53%), Gaps = 20/200 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E ++ I +L +L +V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGCDVGFEQEG-AVTRAAIAILRYPSLALVEYQIARVATTMPYIPGFLSFREYPALLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 AWQQLQQK-----PDLIFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKR--------- 135
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
+ +A E+ + PL+ G G RS P+FI+ GH +S D+A+ VK
Sbjct: 136 -LCGTFEALEDVQGALEPLL-DKGEQLGWVWRSK-ARCNPLFIATGHRVSADSALAWVKR 192
Query: 276 -TCKYRVPEPIRQAD-IRSR 293
YR+PEP R AD I SR
Sbjct: 193 CMAGYRLPEPTRWADAIASR 212
>gi|311281447|ref|YP_003943678.1| Deoxyribonuclease V [Enterobacter cloacae SCF1]
gi|308750642|gb|ADO50394.1| Deoxyribonuclease V [Enterobacter cloacae SCF1]
Length = 223
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 115/223 (51%), Gaps = 21/223 (9%)
Query: 70 DFFTWNLPNSTTTNTSTKEEEEVL--LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIV 127
D T L T ++ +E+ + ++IGG D+ F ++ I +VVL L++V
Sbjct: 2 DLATLRLQQQTLASSVIREDRLDVDPPRWIGGADVGF-EQGGEITRAAMVVLSYPALELV 60
Query: 128 YEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGL 187
+ + +PY+PGFL+FRE P LL+ + + ++ P +L VDG+G+ HPR G+
Sbjct: 61 EYKVARIATTMPYIPGFLSFREYPALLAAWEQLAQK-----PDLLFVDGHGISHPRRLGV 115
Query: 188 ASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR 247
ASH G+L ++ TIGV K G + L A+ + PL+ G R
Sbjct: 116 ASHFGLLVDVPTIGVAKK-------RLCGKFEPLSAEPGA---LAPLL-DKGEPLAWVWR 164
Query: 248 STPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
S P+F+S GH +S D+A+ V+ + YR+PEP R AD
Sbjct: 165 SK-ARCNPLFVSTGHRVSQDSALAWVQRCMRGYRLPEPTRWAD 206
>gi|319788948|ref|YP_004090263.1| Deoxyribonuclease V [Ruminococcus albus 7]
gi|315450815|gb|ADU24377.1| Deoxyribonuclease V [Ruminococcus albus 7]
Length = 240
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 115/221 (52%), Gaps = 35/221 (15%)
Query: 94 LKYIGGVDMSF---SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA 150
+K + G+D+++ D C CIV++D T +++ + ++ VPY+PGFLAFRE
Sbjct: 40 IKTVAGIDLAYWQNENGDEQAVC-CIVIIDFTTHEVIERQHFSGKINVPYMPGFLAFREL 98
Query: 151 PVLL---SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
P++L LL+N+ P + + DGNG LHPR G+ASH + T G+ K
Sbjct: 99 PLILETVKLLENI--------PDIYIFDGNGYLHPRHMGIASHASFYLDRPTFGIAKTYF 150
Query: 208 HVDGLTHSGVRQLLDAKENNNE-----DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGH 262
D T D E + E DI+ G +G A+R T ++P+F+SVG+
Sbjct: 151 RADKKT--------DYTEPSPESGSFTDIVI----GGEVYGRALR-THTGVRPVFVSVGN 197
Query: 263 CISLDTAVMI-VKMTCK-YRVPEPIRQADIRSRDYLQKHQS 301
ISLDTA I + +T K +P P R AD+ + +K +S
Sbjct: 198 NISLDTACNIALTLTDKESHIPIPTRLADLDTHVMREKLRS 238
>gi|317046453|ref|YP_004114101.1| deoxyribonuclease V [Pantoea sp. At-9b]
gi|316948070|gb|ADU67545.1| Deoxyribonuclease V [Pantoea sp. At-9b]
Length = 222
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 81 TTNTSTKEEEEVLL-KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVP 139
+ +++ EVL + I G D+ F ++ ++ +V+L+ +LQ+V + + +P
Sbjct: 14 AADVVRQDDFEVLPPRLIAGADVGF-EQGGAVTRAALVILEYPSLQLVEHQIARISTTMP 72
Query: 140 YVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTT 199
Y+PGFL+FRE P LL+ ++ + P +L VDG+G+ HPR G+A+H G+L ++ T
Sbjct: 73 YIPGFLSFREVPALLAAWQQLQHQ-----PDLLFVDGHGISHPRRLGVAAHFGLLVDVPT 127
Query: 200 IGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFIS 259
IGV K G LD + + ++ G W R P+FIS
Sbjct: 128 IGVAKR-------RLCGQFAALDDAPGSRQPLLDKGEQLGWVWRSKARCN-----PLFIS 175
Query: 260 VGHCISLDTAVMIVK-MTCKYRVPEPIRQAD 289
GH +S D+A+ V+ YR+PEP R AD
Sbjct: 176 SGHRVSTDSALQWVENCMAGYRLPEPTRWAD 206
>gi|213609698|ref|ZP_03369524.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
Length = 215
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 22 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 80
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 81 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 128
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + L A+ + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 129 GKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQR 183
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 184 CMKGYRLPEPTRWAD 198
>gi|427723949|ref|YP_007071226.1| Endonuclease V [Leptolyngbya sp. PCC 7376]
gi|427355669|gb|AFY38392.1| Endonuclease V [Leptolyngbya sp. PCC 7376]
Length = 225
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 114/241 (47%), Gaps = 51/241 (21%)
Query: 57 EIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCI 116
E+Q+ L++ +I +D F + +K + GVD F + +I C +
Sbjct: 19 EVQENLRQYVICQDQF------------------QEPIKLVAGVDAGFENKFETI-CVAV 59
Query: 117 VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDG 176
VL L+++ PYVPG+L+FRE P ++ L ++ +P +++ DG
Sbjct: 60 AVLSFPELEVIETKVIRRPTTFPYVPGYLSFRELPTIVEALGEIEN-----FPDLILCDG 114
Query: 177 NGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMG 236
G HPR FGLA H+GVL + TIGV K+ + D +PL
Sbjct: 115 QGYAHPRRFGLACHLGVLLDCPTIGVAKS------------------RYIGEHDELPLEK 156
Query: 237 G-------SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQA 288
G G +RS ++P++ISVGH ISL+TA+ ++ T KYR+PE R A
Sbjct: 157 GEWVNLMDKDERIGAVLRSR-KKVRPLYISVGHRISLETAIAYVLACTPKYRLPETTRIA 215
Query: 289 D 289
D
Sbjct: 216 D 216
>gi|428162980|gb|EKX32078.1| hypothetical protein GUITHDRAFT_91096 [Guillardia theta CCMP2712]
Length = 108
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 72/102 (70%)
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
++ +++++YE +R+ +PY+ GFLAFRE+P L+ +++ ++ PQ++++DGNG
Sbjct: 1 MEFPSMKVLYEKRKSVRIDLPYISGFLAFRESPPLVQMIEEIRADKPALLPQIVLIDGNG 60
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQL 220
+LHPRG G+ASHIGV+ ++ TIGV KNL DGL VR +
Sbjct: 61 ILHPRGCGVASHIGVVTDIPTIGVAKNLICFDGLNRDAVRSI 102
>gi|238794948|ref|ZP_04638545.1| Endonuclease V [Yersinia intermedia ATCC 29909]
gi|238725706|gb|EEQ17263.1| Endonuclease V [Yersinia intermedia ATCC 29909]
Length = 234
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 111/219 (50%), Gaps = 32/219 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ +I G D+ F ++ I I +L +L++V + + +PY+PG L+FRE P L
Sbjct: 29 VHFIAGADVGFEQQG-EITRAAIAILRYPSLELVEYQVARVATSLPYIPGLLSFREYPAL 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ ++++ PQ++ VDG G+ HPR G+ASH G+L ++ TIGV K+ L
Sbjct: 88 LAAWGQLQQQ-----PQLVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGHSLP 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
E++N + PL+ G G W +R P+FIS GH +S+ +A+
Sbjct: 143 ----------LESDNGALQPLIDGDEQLGWVWRSKIRCN-----PLFISPGHRVSVSSAL 187
Query: 271 MIVKM-TCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
V+ YR+PEP R AD + + Q QRW
Sbjct: 188 AWVQACMAGYRLPEPTRWADAIASNRPQ-------FQRW 219
>gi|332159923|ref|YP_004296500.1| endonuclease V [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|386310949|ref|YP_006007005.1| endonuclease V [Yersinia enterocolitica subsp. palearctica Y11]
gi|418243581|ref|ZP_12870052.1| endonuclease V [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433549234|ref|ZP_20505279.1| Endonuclease V [Yersinia enterocolitica IP 10393]
gi|318607526|emb|CBY29024.1| endonuclease V [Yersinia enterocolitica subsp. palearctica Y11]
gi|325664153|gb|ADZ40797.1| endonuclease V [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|351776931|gb|EHB19195.1| endonuclease V [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431789870|emb|CCO68319.1| Endonuclease V [Yersinia enterocolitica IP 10393]
Length = 234
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 112/221 (50%), Gaps = 36/221 (16%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F ++ + I VL +L++V + + +PY+PG L+FRE P L
Sbjct: 29 VRFIAGADVGFEQQG-EVTRAAIAVLRYPSLELVEYQVARVATSLPYIPGLLSFREYPAL 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGK-----NLHH 208
L+ + +++R PQ++ VDG G+ HPR G+ASH G+L ++ TIGV K N
Sbjct: 88 LAAWEQIQQR-----PQLVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGNFEP 142
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
+ G + ++ L+DA E G W R P+FIS GH +S+ +
Sbjct: 143 L-GDDNGALQPLVDADEQ-----------LGWVWRSKSRCN-----PLFISPGHRVSVGS 185
Query: 269 AVMIVK-MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
A+ V+ YR+PEP R AD + + Q QRW
Sbjct: 186 ALGWVQHCMAGYRLPEPTRWADAIASNRPQ-------FQRW 219
>gi|16762289|ref|NP_457906.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|16767422|ref|NP_463037.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29143777|ref|NP_807119.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62182619|ref|YP_219036.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|167994969|ref|ZP_02576059.1| endonuclease V [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168264576|ref|ZP_02686549.1| endonuclease V [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168823118|ref|ZP_02835118.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|197251241|ref|YP_002149076.1| endonuclease V [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197264605|ref|ZP_03164679.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198243306|ref|YP_002218084.1| endonuclease V [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|213051530|ref|ZP_03344408.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213428481|ref|ZP_03361231.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213580638|ref|ZP_03362464.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
gi|213647194|ref|ZP_03377247.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|213854791|ref|ZP_03383031.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
gi|224585708|ref|YP_002639507.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|238913746|ref|ZP_04657583.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289826725|ref|ZP_06545690.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|374981555|ref|ZP_09722881.1| Endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|375116970|ref|ZP_09762140.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|375121610|ref|ZP_09766777.1| endonuclease V [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|378447493|ref|YP_005235125.1| putative endonuclease V [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|378453090|ref|YP_005240450.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378702015|ref|YP_005183973.1| putative endonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378961629|ref|YP_005219115.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
gi|378986845|ref|YP_005250001.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378991440|ref|YP_005254604.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379703405|ref|YP_005245133.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383498755|ref|YP_005399444.1| endonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|409247864|ref|YP_006888557.1| endonuclease V (deoxyinosine 3'endoduclease) [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|418514715|ref|ZP_13080911.1| endonuclease V [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|422028405|ref|ZP_16374710.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422033458|ref|ZP_16379529.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427557121|ref|ZP_18930032.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427574951|ref|ZP_18934623.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427596567|ref|ZP_18939541.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427621149|ref|ZP_18944423.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427644919|ref|ZP_18949311.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427658419|ref|ZP_18954031.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427663685|ref|ZP_18958935.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427681360|ref|ZP_18963828.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|440762672|ref|ZP_20941725.1| endonuclease V [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|440770343|ref|ZP_20949294.1| endonuclease V [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|440771112|ref|ZP_20950036.1| endonuclease V [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|445144452|ref|ZP_21387130.1| endonuclease V [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|445155054|ref|ZP_21392143.1| endonuclease V [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
gi|56405067|sp|P68737.1|NFI_SALTI RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|56405068|sp|P68738.1|NFI_SALTY RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|73921212|sp|Q57H57.1|NFI_SALCH RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730062|sp|B5F1I1.1|NFI_SALA4 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730063|sp|B5FQL3.1|NFI_SALDC RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|254767280|sp|C0Q2T0.1|NFI_SALPC RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|25326904|pir||AB0932 probable endonuclease nfi [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|6960342|gb|AAF33502.1| 95% identity over 218 of 233 amino acids with E. coli endonuclease
V (NFI) (SW:P32679) [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16422726|gb|AAL22996.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|16504593|emb|CAD09476.1| putative endonuclease [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29139412|gb|AAO70979.1| putative endonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|62130252|gb|AAX67955.1| endonuclease V (deoxyinosine 3'endoduclease) [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|197214944|gb|ACH52341.1| endonuclease V [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|197242860|gb|EDY25480.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197937822|gb|ACH75155.1| endonuclease V [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|205327264|gb|EDZ14028.1| endonuclease V [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205340585|gb|EDZ27349.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205346989|gb|EDZ33620.1| endonuclease V [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|224470236|gb|ACN48066.1| putative endonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261249272|emb|CBG27134.1| putative endonuclease V [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996469|gb|ACY91354.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160664|emb|CBW20195.1| hypothetical endonuclease [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915274|dbj|BAJ39248.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320088598|emb|CBY98357.1| endonuclease V (deoxyinosine 3'endoduclease) [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321223368|gb|EFX48435.1| Endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|322717116|gb|EFZ08687.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|323132504|gb|ADX19934.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|326625877|gb|EGE32222.1| endonuclease V [Salmonella enterica subsp. enterica serovar Dublin
str. SD3246]
gi|332990987|gb|AEF09970.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|366078067|gb|EHN42073.1| endonuclease V [Salmonella enterica subsp. enterica serovar Pomona
str. ATCC 10729]
gi|374355501|gb|AEZ47262.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. P-stx-12]
gi|380465576|gb|AFD60979.1| putative endonuclease [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|414011570|gb|EKS95521.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414013013|gb|EKS96915.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414013047|gb|EKS96948.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414027001|gb|EKT10254.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414027589|gb|EKT10813.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414030224|gb|EKT13351.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414041015|gb|EKT23605.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414041707|gb|EKT24266.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414046284|gb|EKT28626.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414055291|gb|EKT37205.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|436411813|gb|ELP09760.1| endonuclease V [Salmonella enterica subsp. enterica serovar Agona
str. SH08SF124]
gi|436422567|gb|ELP20400.1| endonuclease V [Salmonella enterica subsp. enterica serovar Agona
str. SH11G1113]
gi|436422785|gb|ELP20612.1| endonuclease V [Salmonella enterica subsp. enterica serovar Agona
str. SH10GFN094]
gi|444846791|gb|ELX71945.1| endonuclease V [Salmonella enterica subsp. enterica serovar Dublin
str. SL1438]
gi|444849993|gb|ELX75100.1| endonuclease V [Salmonella enterica subsp. enterica serovar Dublin
str. HWS51]
Length = 223
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + L A+ + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 137 GKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|423112105|ref|ZP_17099799.1| endonuclease V [Klebsiella oxytoca 10-5243]
gi|423117375|ref|ZP_17105066.1| endonuclease V [Klebsiella oxytoca 10-5245]
gi|376375163|gb|EHS87959.1| endonuclease V [Klebsiella oxytoca 10-5243]
gi|376376120|gb|EHS88903.1| endonuclease V [Klebsiella oxytoca 10-5245]
Length = 223
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 105/198 (53%), Gaps = 27/198 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EVTRAAMVLLSYPSLELVEYQVARVATTMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WELLSQK-----PNLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED----IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+ L K D + PL+ G +RS P+F+S GH + LD+A+M
Sbjct: 133 --KRLCGKFGPLGDEPGALAPLLD-KGEQLAWVLRSK-TRCNPLFVSTGHRVGLDSALMW 188
Query: 273 VKMTCK-YRVPEPIRQAD 289
V+ K YR+PEP R AD
Sbjct: 189 VERCLKGYRLPEPTRWAD 206
>gi|253686626|ref|YP_003015816.1| Deoxyribonuclease V [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|259511733|sp|C6DHT0.1|NFI_PECCP RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|251753204|gb|ACT11280.1| Deoxyribonuclease V [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 229
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 107/199 (53%), Gaps = 27/199 (13%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E S+ I V+ +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-SVTRAAIAVMRYPSLELVEYKIARISTTMPYIPGFLSFRECPGLLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLT 213
++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+ + LT
Sbjct: 90 AWALLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKSRLCGRFEPLT 144
Query: 214 HS-GVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
S G +Q LLD E G W R P+F++ GH +S D+A+
Sbjct: 145 ESVGSQQPLLDKGEQ-----------IGWVWRSKARCN-----PLFVATGHRVSQDSALH 188
Query: 272 IVKMTCK-YRVPEPIRQAD 289
V+ + YR+PEP R AD
Sbjct: 189 WVQSCMRGYRLPEPTRWAD 207
>gi|197286602|ref|YP_002152474.1| endonuclease V [Proteus mirabilis HI4320]
gi|226730061|sp|B4EYT7.1|NFI_PROMH RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|194684089|emb|CAR45474.1| endonuclease V [Proteus mirabilis HI4320]
Length = 222
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
YI G D+ F ++ IVV+ + +IV + + +PY+PG L+FRE P LL
Sbjct: 29 YIAGADVGFENSG-AVTRAAIVVMHYPSFEIVEYQIARIATLLPYIPGLLSFRECPALLK 87
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+K++ PQ++ VDG G+ HPR G+ASH G+LA++ TIGV K+
Sbjct: 88 AWQGIKQK-----PQLVFVDGQGIAHPRRLGVASHFGLLADIPTIGVAKS-------RLC 135
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + LD + E ++ G RS KP++IS G+ +S+++A+ VK
Sbjct: 136 GDDKKLDDDVGSTEKLM----DKDEQLGWIYRSK-KRCKPLYISPGYKVSMESALAWVKR 190
Query: 276 TCK-YRVPEPIRQAD 289
YR+PEP R AD
Sbjct: 191 CINGYRLPEPTRWAD 205
>gi|238892473|ref|YP_002917207.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|402783011|ref|YP_006638557.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|238544789|dbj|BAH61140.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|402543850|gb|AFQ67999.1| Endonuclease V [Klebsiella pneumoniae subsp. pneumoniae 1084]
Length = 223
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 33/201 (16%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E I +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EITRAAMVLLTWPELELVEYQVARVATSMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K
Sbjct: 90 WEQLSQK-----PNLLFVDGHGISHPRRLGVASHFGLMIDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED----IIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
+ L K + D + PLM + W +R P+FIS GH + +D+A
Sbjct: 133 --KRLCGKIGDLGDEPGALAPLMDKNEQLAWVWRSKVRCN-----PLFISTGHRVGMDSA 185
Query: 270 VMIVKMTCK-YRVPEPIRQAD 289
+M V+ + YR+PEP R AD
Sbjct: 186 LMWVERCMRGYRLPEPTRWAD 206
>gi|422021571|ref|ZP_16368083.1| endonuclease V [Providencia sneebia DSM 19967]
gi|414099429|gb|EKT61072.1| endonuclease V [Providencia sneebia DSM 19967]
Length = 223
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 109/203 (53%), Gaps = 19/203 (9%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
+++E +IGG D+ F ++ S+ IVVL LQ+V + + ++PY+PG L+F
Sbjct: 22 QDDEQQPHFIGGADVGFEQQG-SVTRAVIVVLSWPDLQLVEYQIARVPTELPYIPGLLSF 80
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE P L++ + +R P +++VDG G+ HPR FG+A H G+ AN+ TIGV K+
Sbjct: 81 REVPGLMAAWSQLNQR-----PDLVLVDGQGIAHPRRFGVACHFGLQANVPTIGVAKSKL 135
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
+ D L L + + + ++ G +RS P+FIS GH +S
Sbjct: 136 YGDYLA-------LGEEPGSCQQLV----HEAEQLGWVLRSK-KRCNPLFISPGHKMSYT 183
Query: 268 TAVMIVKMTCK-YRVPEPIRQAD 289
+++ V+ + YR+PEP R AD
Sbjct: 184 SSLEWVERCLRGYRLPEPTRFAD 206
>gi|238798676|ref|ZP_04642150.1| Endonuclease V [Yersinia mollaretii ATCC 43969]
gi|238717494|gb|EEQ09336.1| Endonuclease V [Yersinia mollaretii ATCC 43969]
Length = 238
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 39/225 (17%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F ++ + I +L +L++V + + +PY+PG L+FRE P L
Sbjct: 28 VRFIAGADVGFEQQG-EVTRAAIAILRYPSLELVEYQIARVETSLPYIPGLLSFREYPAL 86
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-------- 205
L+ +++R P ++ VDG G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 87 LAAWAQLQQR-----PDLVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGHFQP 141
Query: 206 LHHVDGLTHS-GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCI 264
L + +G S V+ L+D E G W R P+FIS GH +
Sbjct: 142 LENNNGAVQSLAVQPLIDGDEQ-----------LGWVWRSKARCN-----PLFISPGHRV 185
Query: 265 SLDTAVMIV-KMTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
S+ +A+ V + YR+PEP R AD + + Q QRW
Sbjct: 186 SVASALTWVQRCMAGYRLPEPTRWADAIASNRPQ-------FQRW 223
>gi|261819580|ref|YP_003257686.1| endonuclease V [Pectobacterium wasabiae WPP163]
gi|261603593|gb|ACX86079.1| Deoxyribonuclease V [Pectobacterium wasabiae WPP163]
gi|385869846|gb|AFI88366.1| Endonuclease V [Pectobacterium sp. SCC3193]
Length = 229
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 106/199 (53%), Gaps = 27/199 (13%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E S+ I V+ +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-SVTRAAIAVMRYPSLELVEYKIARISTTMPYIPGFLSFRECPGLLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLT 213
++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+ + L
Sbjct: 90 AWALLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKSRLCGRFEPLA 144
Query: 214 HS-GVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
S G RQ LLD E G W R P+F++ GH +S D+A+
Sbjct: 145 ESVGSRQPLLDKGEQ-----------IGWVWRSKARCN-----PLFVATGHRVSQDSALH 188
Query: 272 IVKMTCK-YRVPEPIRQAD 289
V+ + YR+PEP R AD
Sbjct: 189 WVQCCMRGYRLPEPTRWAD 207
>gi|152972860|ref|YP_001338006.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|365145665|ref|ZP_09349090.1| endonuclease V [Klebsiella sp. 4_1_44FAA]
gi|378976376|ref|YP_005224517.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|386037493|ref|YP_005957406.1| endonuclease V [Klebsiella pneumoniae KCTC 2242]
gi|419976643|ref|ZP_14492036.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419982371|ref|ZP_14497632.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419987848|ref|ZP_14502959.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419993747|ref|ZP_14508681.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419999638|ref|ZP_14514408.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420005453|ref|ZP_14520074.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420011069|ref|ZP_14525531.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420017125|ref|ZP_14531406.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420022604|ref|ZP_14536768.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420028409|ref|ZP_14542386.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420034295|ref|ZP_14548084.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420039839|ref|ZP_14553465.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420045696|ref|ZP_14559158.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420051479|ref|ZP_14564763.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420057207|ref|ZP_14570350.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420062547|ref|ZP_14575516.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420068526|ref|ZP_14581303.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420074306|ref|ZP_14586917.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420080066|ref|ZP_14592499.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420085174|ref|ZP_14597410.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421910621|ref|ZP_16340399.1| Endonuclease V [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421914611|ref|ZP_16344252.1| Endonuclease V [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424833321|ref|ZP_18258049.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|424935619|ref|ZP_18353991.1| Endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|425078927|ref|ZP_18482030.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425079330|ref|ZP_18482427.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425089705|ref|ZP_18492795.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425094144|ref|ZP_18497227.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428150410|ref|ZP_18998184.1| Endonuclease V [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428933544|ref|ZP_19007094.1| endonuclease V [Klebsiella pneumoniae JHCK1]
gi|428940201|ref|ZP_19013292.1| endonuclease V [Klebsiella pneumoniae VA360]
gi|449058824|ref|ZP_21736766.1| endonuclease V [Klebsiella pneumoniae hvKP1]
gi|166233960|sp|A6TGQ5.1|NFI_KLEP7 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|150957709|gb|ABR79739.1| endonuclease V (deoxyinosine 3'endoduclease) [Klebsiella pneumoniae
subsp. pneumoniae MGH 78578]
gi|339764621|gb|AEK00842.1| endonuclease V [Klebsiella pneumoniae KCTC 2242]
gi|363645682|gb|EHL84943.1| endonuclease V [Klebsiella sp. 4_1_44FAA]
gi|364515787|gb|AEW58915.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397340103|gb|EJJ33319.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397340627|gb|EJJ33825.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397342955|gb|EJJ36108.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397357666|gb|EJJ50412.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397357815|gb|EJJ50555.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397361675|gb|EJJ54334.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397373963|gb|EJJ66332.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397376934|gb|EJJ69179.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397383820|gb|EJJ75952.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397391688|gb|EJJ83519.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397392816|gb|EJJ84593.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397401842|gb|EJJ93459.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397409066|gb|EJK00396.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397409160|gb|EJK00486.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397419731|gb|EJK10859.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397426281|gb|EJK17111.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397427793|gb|EJK18553.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397435895|gb|EJK26498.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397442659|gb|EJK33005.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397449488|gb|EJK39622.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|405589335|gb|EKB62903.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405598905|gb|EKB72093.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405607842|gb|EKB80794.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405610193|gb|EKB83003.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|407809806|gb|EKF81057.1| Endonuclease V [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|410115500|emb|CCM83024.1| Endonuclease V [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410123027|emb|CCM86877.1| Endonuclease V [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|414710771|emb|CCN32475.1| endonuclease V [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|426302715|gb|EKV64908.1| endonuclease V [Klebsiella pneumoniae VA360]
gi|426305030|gb|EKV67160.1| endonuclease V [Klebsiella pneumoniae JHCK1]
gi|427539625|emb|CCM94322.1| Endonuclease V [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|448875246|gb|EMB10269.1| endonuclease V [Klebsiella pneumoniae hvKP1]
Length = 223
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 33/201 (16%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E I +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EITRAAMVLLTWPELELVEYQVARVATSMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K
Sbjct: 90 WEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLMIDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED----IIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
+ L K + D + PLM + W +R P+FIS GH + +D+A
Sbjct: 133 --KRLCGKIGDLGDEPGALAPLMDKNEQLAWVWRSKVRCN-----PLFISTGHRVGMDSA 185
Query: 270 VMIVKMTCK-YRVPEPIRQAD 289
+M V+ + YR+PEP R AD
Sbjct: 186 LMWVERCMRGYRLPEPTRWAD 206
>gi|420260914|ref|ZP_14763580.1| endonuclease V [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404511626|gb|EKA25495.1| endonuclease V [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 234
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 36/221 (16%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F ++ + I VL +L++V + + +PY+PG L+FRE P L
Sbjct: 29 VRFIAGADVGFEQQG-EVTRAAIAVLRYPSLELVEYQVARVATSLPYIPGLLSFREYPAL 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGK-----NLHH 208
L+ +++R PQ++ VDG G+ HPR G+ASH G+L ++ TIGV K N
Sbjct: 88 LAAWAQIQQR-----PQLVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGNFEP 142
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
+ G + ++ L+DA E G W R P+FIS GH +S+ +
Sbjct: 143 L-GDDNGALQPLVDADEQ-----------LGWVWRSKSRCN-----PLFISPGHRVSVGS 185
Query: 269 AVMIVK-MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
A+ V+ YR+PEP R AD + + Q QRW
Sbjct: 186 ALEWVRHCMAGYRLPEPTRWADAIASNRPQ-------FQRW 219
>gi|425071115|ref|ZP_18474221.1| endonuclease V [Proteus mirabilis WGLW4]
gi|404599940|gb|EKB00393.1| endonuclease V [Proteus mirabilis WGLW4]
Length = 235
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
YI G D+ F ++ IVV+ + +IV + + +PY+PG L+FRE P LL
Sbjct: 42 YIAGADVGFENSG-AVTRAAIVVMHYPSFEIVEYQIARIATLLPYIPGLLSFRECPALLE 100
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+K++ PQ++ VDG G+ HPR G+ASH G+LA++ TIGV K+
Sbjct: 101 AWQGIKQK-----PQLVFVDGQGIAHPRRLGVASHFGLLADIPTIGVAKS-------RLC 148
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + LD + E ++ G RS KP++IS G+ +S+++A+ VK
Sbjct: 149 GDDKKLDDDVGSTEKLM----DKNEQLGWIYRSK-KRCKPLYISPGYKVSMESALAWVKR 203
Query: 276 TCK-YRVPEPIRQAD 289
YR+PEP R AD
Sbjct: 204 CINGYRLPEPTRWAD 218
>gi|206579247|ref|YP_002241061.1| endonuclease V [Klebsiella pneumoniae 342]
gi|290513214|ref|ZP_06552575.1| endonuclease V [Klebsiella sp. 1_1_55]
gi|226730059|sp|B5XYE0.1|NFI_KLEP3 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|206568305|gb|ACI10081.1| endonuclease V [Klebsiella pneumoniae 342]
gi|289774311|gb|EFD82318.1| endonuclease V [Klebsiella sp. 1_1_55]
Length = 223
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 29/199 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E + +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EVTRAAMVLLTWPELELVEYQVARVATTMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K
Sbjct: 90 WEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLMIDVPTIGVAKK----------- 133
Query: 217 VRQLLDAKENNNED--IIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
R E +E + PLM + W +R P+FIS GH + +D+A+M
Sbjct: 134 -RLCGKIGELGDEPGALAPLMDKNEQLAWVWRSKVRCN-----PLFISTGHRVGMDSALM 187
Query: 272 IVKMTCK-YRVPEPIRQAD 289
V+ + YR+PEP R AD
Sbjct: 188 WVERCMRGYRLPEPTRWAD 206
>gi|326801489|ref|YP_004319308.1| endonuclease V [Sphingobacterium sp. 21]
gi|326552253|gb|ADZ80638.1| Endonuclease V [Sphingobacterium sp. 21]
Length = 239
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 27/204 (13%)
Query: 89 EEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLA 146
E+E+ K I G D+S ++ I G IV LD TL+ + YSL++ + PYVPGFLA
Sbjct: 33 EQEI--KTIAGADISLNRFSDIIYAG-IVTLDFNTLKPL--AYSLVKSKTSFPYVPGFLA 87
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P L+ M + P V+MVDG+G+ HPR G+A+H+G L N+ T+G K
Sbjct: 88 FREVPALVEAFLQMTVK-----PDVIMVDGHGIAHPRRLGIAAHLGALINIPTLGCAKKK 142
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
+ + S V+ ++ E G +R T + +KP++IS G+ +S+
Sbjct: 143 LYGNFEEPSAVKYSFSPLKHKEE-----------LLGYVLR-TKNYVKPVYISPGNHLSI 190
Query: 267 DTAVMIVKMTC--KYRVPEPIRQA 288
+ ++ I M C YR+PEP R+A
Sbjct: 191 EDSLRIA-MHCIGTYRLPEPTRKA 213
>gi|359781628|ref|ZP_09284852.1| endonuclease V [Pseudomonas psychrotolerans L19]
gi|359370692|gb|EHK71259.1| endonuclease V [Pseudomonas psychrotolerans L19]
Length = 233
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 115/231 (49%), Gaps = 27/231 (11%)
Query: 68 TEDFFTWNLPNSTTTNTSTKEEEEVLL-------KYIGGVDMSFSKEDPSIACGCIVVLD 120
++ F W+ + + +VLL + GVD+ F +E I V+LD
Sbjct: 3 SDPFAEWDGSPAQARILQKQLATQVLLHDDFGAPRRYAGVDVGF-EEGGEITRAVAVLLD 61
Query: 121 LQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLL 180
+TLQ + + + +PYVPG L+FRE P LL L + + P+++ DG+G+
Sbjct: 62 AETLQPLAHAVARIPTVMPYVPGLLSFRELPALLQALAELPE-----TPELVFCDGHGIA 116
Query: 181 HPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGS 240
HPR G+A+H+GV+ L TIGV K + +G L + D L G
Sbjct: 117 HPRRLGIAAHLGVVTGLPTIGVAKKI-------LTGNHGELAETRGSQVD---LRDREGG 166
Query: 241 TWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQAD 289
G +RS D +KP+ +S GH +SL +A +V M C ++R+PEP R AD
Sbjct: 167 VIGTVLRSK-DRVKPLIVSPGHRVSLASAPALV-MACVRRHRLPEPTRLAD 215
>gi|123440687|ref|YP_001004679.1| endonuclease V [Yersinia enterocolitica subsp. enterocolitica 8081]
gi|166233964|sp|A1JIJ2.1|NFI_YERE8 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|122087648|emb|CAL10430.1| endonuclease V [Yersinia enterocolitica subsp. enterocolitica 8081]
Length = 234
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 36/221 (16%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F ++ + I VL +L++V + + +PY+PG L+FRE P L
Sbjct: 29 VRFIAGADVGFEQQG-EVTRAAIAVLRYPSLELVEYQVARVATSLPYIPGLLSFREYPAL 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGK-----NLHH 208
L+ +++R PQ++ VDG G+ HPR G+ASH G+L ++ TIGV K N
Sbjct: 88 LAAWAQIQQR-----PQLVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGNFEP 142
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
+ G + ++ L+DA E G W R P+FIS GH +S+ +
Sbjct: 143 L-GDDNGALQPLVDADEQ-----------LGWVWRSKSRCN-----PLFISPGHRVSVGS 185
Query: 269 AVMIVK-MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
A+ V+ YR+PEP R AD + + Q QRW
Sbjct: 186 ALEWVQHCIAGYRLPEPTRWADAIASNRPQ-------FQRW 219
>gi|262043762|ref|ZP_06016865.1| deoxyribonuclease V [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259038886|gb|EEW40054.1| deoxyribonuclease V [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 223
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 105/201 (52%), Gaps = 33/201 (16%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E I +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EITRAAMVLLTWPELELVEYQVARVATSMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K
Sbjct: 90 WEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLMIDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED----IIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
+ L K + D + PLM + W +R P+FIS GH + +D+A
Sbjct: 133 --KRLCGKIGDLGDEPGALAPLMDKNEQLAWVWRSKVRCN-----PLFISTGHRVGMDSA 185
Query: 270 VMIVKMTCK-YRVPEPIRQAD 289
+M V+ + YR+PEP R AD
Sbjct: 186 LMWVERCMRGYRLPEPTRWAD 206
>gi|399911766|ref|ZP_10780080.1| deoxyribonuclease V [Halomonas sp. KM-1]
Length = 231
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 113/209 (54%), Gaps = 24/209 (11%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVL-----DLQTLQIVYEDYSLLRLQVPYV 141
+E+ V +++I GVD+ F +E+ I +VVL + ++V + ++PY+
Sbjct: 27 REDRLVPVRHIAGVDIGF-EENGEITRAAVVVLAWPDDPMAGFEVVEQVVHREPTRMPYI 85
Query: 142 PGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIG 201
PG L+FRE P L+ D + R P+++MVDG G+ HPR G+ASH+G+ +L TIG
Sbjct: 86 PGLLSFREIPAALAAFDMLATR-----PELVMVDGQGIAHPRRLGVASHLGLWLDLPTIG 140
Query: 202 VGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVG 261
V K+ GV D + PL G T G +R T +KP+F+S+G
Sbjct: 141 VAKS-------RLCGVH---DEVPEARGEWTPLR-HRGETIGAVLR-TRVGVKPVFVSLG 188
Query: 262 HCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
H ISL T++ +VK + ++PEP R AD
Sbjct: 189 HRISLATSLDWVVKCLGRTKLPEPTRLAD 217
>gi|167391590|ref|XP_001739849.1| endonuclease V [Entamoeba dispar SAW760]
gi|165896299|gb|EDR23755.1| endonuclease V, putative [Entamoeba dispar SAW760]
Length = 193
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 107/244 (43%), Gaps = 65/244 (26%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
QW + Q K +I ED W L L+++GG+D+SFS P+
Sbjct: 4 QWEKYQILHSKDVILEDSHEWTLDT---------------LRHVGGLDISFSTNHPN--- 45
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
LA + P L YP+V++
Sbjct: 46 -------------------------------LAIEKYPEL--------------YPEVVL 60
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDGNG HPR FG A+H+G+ ++ +IGV K + VDG+ + + + I
Sbjct: 61 VDGNGYYHPRRFGSATHVGIYCDIPSIGVAKTVLCVDGIGKKEINIVTSQIKAGESTTIS 120
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
SG +RS ++ PI +S GH +SL TAV+I K C +++PEPIR AD+ SR
Sbjct: 121 T--SSGEVLCGVIRSRGGSINPIVVSCGHKVSLSTAVIICKECCLHKIPEPIRLADLISR 178
Query: 294 DYLQ 297
+ L+
Sbjct: 179 NLLR 182
>gi|227355205|ref|ZP_03839614.1| deoxyribonuclease V [Proteus mirabilis ATCC 29906]
gi|227164714|gb|EEI49568.1| deoxyribonuclease V [Proteus mirabilis ATCC 29906]
Length = 222
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
YI G D+ F ++ IV++ + +IV + + +PY+PG L+FRE P LL
Sbjct: 29 YIAGADVGFENSG-AVTRAAIVIMHYPSFEIVEYQIARIATLLPYIPGLLSFRECPALLE 87
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+K++ PQ++ VDG G+ HPR G+ASH G+LA++ TIGV K+
Sbjct: 88 AWQGIKQK-----PQLVFVDGQGIAHPRRLGVASHFGLLADIPTIGVAKS-------RLC 135
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + LD + E ++ G RS KP++IS G+ +S+++A+ VK
Sbjct: 136 GDDKKLDDDVGSTEKLM----DKDEQLGWIYRSK-KRCKPLYISPGYKVSMESALAWVKR 190
Query: 276 TCK-YRVPEPIRQAD 289
YR+PEP R AD
Sbjct: 191 CINGYRLPEPTRWAD 205
>gi|335420186|ref|ZP_08551226.1| endonuclease V [Salinisphaera shabanensis E1L3A]
gi|334895232|gb|EGM33411.1| endonuclease V [Salinisphaera shabanensis E1L3A]
Length = 236
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 118/216 (54%), Gaps = 20/216 (9%)
Query: 75 NLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLL 134
N+ + TT+ +T ++ + +++GGVD+ F ++ + VVL+ QTL++V + +
Sbjct: 34 NVQKTLTTHVNTVDDLPPV-RWLGGVDIGF-EDGGNTTRAAAVVLNAQTLEVVDTALARV 91
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
++PY+PG L+FRE P L+ L+ + P +++VDG+G+ HPR G+A+H+G++
Sbjct: 92 PTRMPYIPGLLSFREIPGALAALEQLAT-----LPDLILVDGHGIAHPRRLGVATHLGLV 146
Query: 195 ANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLK 254
L TIGV K LT S A+ + + G T G +RS +K
Sbjct: 147 TGLPTIGVAKKR-----LTGS------HAEVPDKRGAWVELTDRGETIGAVLRSRVG-VK 194
Query: 255 PIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
PIFIS GH I L +A+ + +YR+PE R AD
Sbjct: 195 PIFISPGHRIGLASALSFTMSALTRYRLPETTRVAD 230
>gi|425069662|ref|ZP_18472777.1| endonuclease V [Proteus mirabilis WGLW6]
gi|404596814|gb|EKA97332.1| endonuclease V [Proteus mirabilis WGLW6]
Length = 235
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
YI G D+ F ++ IVV+ + +IV + + +PY+PG L+FRE P LL
Sbjct: 42 YIAGADVGFENSG-AVTRAAIVVMHYPSFEIVEYQIARIATLLPYIPGLLSFRECPALLE 100
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+K++ PQ++ VDG G+ HPR G+ASH G+LA++ TIGV K+
Sbjct: 101 AWQGIKQK-----PQLVFVDGQGIAHPRRLGVASHFGLLADIPTIGVAKS-------RLC 148
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + LD + E ++ G RS KP++IS G+ +S+++A+ VK
Sbjct: 149 GDDKKLDDDVGSTEKLM----DKDEQLGWIYRSK-KRCKPLYISPGYKVSMESALAWVKR 203
Query: 276 TCK-YRVPEPIRQAD 289
YR+PEP R AD
Sbjct: 204 CINGYRLPEPTRWAD 218
>gi|56415994|ref|YP_153069.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197364921|ref|YP_002144558.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|62286969|sp|Q5PKA2.1|NFI_SALPA RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730068|sp|B5BJR7.1|NFI_SALPK RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|56130251|gb|AAV79757.1| putative endonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197096398|emb|CAR62003.1| putative endonuclease [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 223
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTWAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + L + + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|336248133|ref|YP_004591843.1| endonuclease V [Enterobacter aerogenes KCTC 2190]
gi|334734189|gb|AEG96564.1| endonuclease V [Enterobacter aerogenes KCTC 2190]
Length = 223
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 100/194 (51%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E I +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EITRAAMVLLTYPGLELVEYQVARVATTMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ ++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 90 WQQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L A+ +I W R P+FIS GH + +D+A+M V+
Sbjct: 138 KFEPLGAEPGALAPLIDKGDQLAWVWRSKARCN-----PLFISTGHRVGIDSALMWVERC 192
Query: 277 CK-YRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 193 MQGYRLPEPTRWAD 206
>gi|219849907|ref|YP_002464340.1| deoxyribonuclease V [Chloroflexus aggregans DSM 9485]
gi|219544166|gb|ACL25904.1| Deoxyribonuclease V [Chloroflexus aggregans DSM 9485]
Length = 223
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 104/201 (51%), Gaps = 29/201 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAP 151
L+ + GVD F E ++ +VVL L V DY+L+R V PYVPG LAFRE P
Sbjct: 34 LRLVAGVDAGFENEG-TVIRAAVVVLRFPDLAPV--DYALVRQPVTFPYVPGLLAFREVP 90
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HH 208
+++ D + H P +++ DG+G+ HPR G+A H+GVL NL TIG K +
Sbjct: 91 AMIAAFDRL-----HTEPDMVICDGHGIAHPRRCGIACHLGVLLNLPTIGCAKQRLIGRY 145
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
V T G R PL GS G +R+ D +P+F+S GH +SLD
Sbjct: 146 VTPPTVRGARS-------------PLYDGS-EQIGWVLRTRADA-QPVFVSPGHRVSLDR 190
Query: 269 AVMIV-KMTCKYRVPEPIRQA 288
A +V T ++R+PE R A
Sbjct: 191 ATEVVMACTTRFRLPETTRFA 211
>gi|330005093|ref|ZP_08305103.1| deoxyribonuclease V [Klebsiella sp. MS 92-3]
gi|328536426|gb|EGF62779.1| deoxyribonuclease V [Klebsiella sp. MS 92-3]
Length = 223
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 105/201 (52%), Gaps = 33/201 (16%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E + +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EVTRAAMVLLTWPELELVEYQVARVATSMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K
Sbjct: 90 WEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLMIDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED----IIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
+ L K + D + PLM + W +R P+FIS GH + +D+A
Sbjct: 133 --KRLCGKIGDLGDEPGALAPLMDKNEQLAWVWRSKVRCN-----PLFISTGHRVGMDSA 185
Query: 270 VMIVKMTCK-YRVPEPIRQAD 289
+M V+ + YR+PEP R AD
Sbjct: 186 LMWVERCMRGYRLPEPTRWAD 206
>gi|319789791|ref|YP_004151424.1| Deoxyribonuclease V [Thermovibrio ammonificans HB-1]
gi|317114293|gb|ADU96783.1| Deoxyribonuclease V [Thermovibrio ammonificans HB-1]
Length = 234
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 114/222 (51%), Gaps = 30/222 (13%)
Query: 95 KYIGGVDMSF--SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
K I G D++F ++P+ G VVL L++V + Y L++++PYV GFLAFRE
Sbjct: 29 KLIAGCDLTFLDPFKNPTTGIGAFVVLTYPELEVVEKHYETLKVEIPYVAGFLAFRE--- 85
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHH---V 209
L + P +++VDG+G+ HPR G+ASH+GV+ + T+G K +
Sbjct: 86 --LPLLLKTLKRLKHTPDLIVVDGHGITHPRKLGIASHLGVVTGIPTVGCAKKPLYGEFQ 143
Query: 210 DGLTHSGVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
+ G R + D K +G+ G A+R T +KP+++S GH ++ +
Sbjct: 144 EPCRERGCRSPITDPK-------------TGTVLGYALR-TKRNVKPVYVSPGHLVTPEE 189
Query: 269 AVMIVKMTC-KYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
A +V +C KYR+PEP R A +YLQ + + + Q
Sbjct: 190 AAELVLSSCTKYRLPEPTRLA----HNYLQSVRKVIIQGKSQ 227
>gi|440229034|ref|YP_007342827.1| deoxyinosine 3'endonuclease (endonuclease V) [Serratia marcescens
FGI94]
gi|440050739|gb|AGB80642.1| deoxyinosine 3'endonuclease (endonuclease V) [Serratia marcescens
FGI94]
Length = 231
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 20/200 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E ++ I +L +L +V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGCDVGFEQEG-AVTRAAIAILRYPSLALVEYQVARIATTMPYIPGFLSFREYPALLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 AWEQLRQK-----PDLIFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 137
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-K 274
G + L A+ ++ G W R P+FI+ GH +S D A+ V +
Sbjct: 138 GKFEPLSAEVGAKSALMDKGEQLGWVWRSKARCN-----PLFIATGHRVSADGALAWVQR 192
Query: 275 MTCKYRVPEPIRQAD-IRSR 293
YR+PEP R AD I SR
Sbjct: 193 CMAGYRLPEPTRWADAIASR 212
>gi|333898976|ref|YP_004472849.1| Endonuclease V [Pseudomonas fulva 12-X]
gi|333114241|gb|AEF20755.1| Endonuclease V [Pseudomonas fulva 12-X]
Length = 235
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 108/201 (53%), Gaps = 26/201 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ + GVD+ F +E I ++LD ++LQ V E + + +PYVPG L+FRE P L
Sbjct: 42 LRLLAGVDVGF-EEGGEITRAAAILLDAESLQPVAECVARIPTSMPYVPGLLSFRELPAL 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVD 210
LS L + P +++VDG+G+ HPRG G+A+H+GV+ TIGV K + HH +
Sbjct: 101 LSALAGLPNE-----PDLIVVDGHGIAHPRGLGIAAHLGVVTGRPTIGVAKKILTGHHCE 155
Query: 211 GLTHSGVR-QLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
G + +LLD N I G +RS ++P+ +S G+ +S+ A
Sbjct: 156 LGEERGDKVELLD---RQNRQI-----------GWVLRSK-RKVRPLIVSPGNRVSMHKA 200
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
+++ YR+PEP R AD
Sbjct: 201 AELVLSWDRGYRLPEPTRLAD 221
>gi|161505344|ref|YP_001572456.1| endonuclease V [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|189029073|sp|A9MHD1.1|NFI_SALAR RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|160866691|gb|ABX23314.1| hypothetical protein SARI_03489 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 223
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K S
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLS 143
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
L A + E + W R P+FI+ GH +S D+A+ V+
Sbjct: 144 AEPGALSALMDKGEQL-------AWVWRSKARCN-----PLFIATGHRVSTDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|200389108|ref|ZP_03215720.1| endonuclease V [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
gi|199606206|gb|EDZ04751.1| endonuclease V [Salmonella enterica subsp. enterica serovar Virchow
str. SL491]
Length = 223
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 VWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + L + + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|390562021|ref|ZP_10244280.1| Endonuclease V [Nitrolancetus hollandicus Lb]
gi|390173404|emb|CCF83581.1| Endonuclease V [Nitrolancetus hollandicus Lb]
Length = 227
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 108/195 (55%), Gaps = 21/195 (10%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + +DM + + +A G V L L V E+ + + PY+PG L+FREAPV L
Sbjct: 35 RIVAAIDMHVADK---LALGSAVELTYPELTPVDENVAAQLVTFPYIPGLLSFREAPVCL 91
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++ ++ + P +++VDG G HPR FG+A HIG + TIGV K++ + H
Sbjct: 92 AAVEGLETK-----PDLVLVDGQGRAHPRRFGIACHIGHELGIPTIGVAKSIL----VGH 142
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
G D E PL+ G G+A+R+ P T KP+++SVG I+L+ AV ++
Sbjct: 143 YG-----DLGEERG-STAPLI-DRGEVVGMAVRTRPGT-KPVYVSVGDLITLEDAVDWVL 194
Query: 274 KMTCKYRVPEPIRQA 288
+ T +YR+PEP R A
Sbjct: 195 RTTGRYRLPEPSRLA 209
>gi|398781023|ref|ZP_10545210.1| endonuclease V [Streptomyces auratus AGR0001]
gi|396997764|gb|EJJ08711.1| endonuclease V [Streptomyces auratus AGR0001]
Length = 238
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 92/175 (52%), Gaps = 18/175 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TL +V E ++ ++ PYVPG LAFRE P +L L + + P +++ DG GL HP
Sbjct: 78 TLAVVDEATAVGQVSFPYVPGLLAFREIPTVLDALACLAR-----VPDLVVCDGYGLAHP 132
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLASH+GVL L TIGV KN + D PL+ G+
Sbjct: 133 RRFGLASHLGVLTGLPTIGVAKNPFTFR----------YAPPGPDRGDTSPLLDGA-EEV 181
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYL 296
G A+R T +KP+F+SVGH + LD A +++ YR+PE R AD R L
Sbjct: 182 GRALR-TQKGVKPVFVSVGHRVDLDRACAHTLRLAAHYRLPETTRAADALCRKAL 235
>gi|284040977|ref|YP_003390907.1| deoxyribonuclease V [Spirosoma linguale DSM 74]
gi|283820270|gb|ADB42108.1| Deoxyribonuclease V [Spirosoma linguale DSM 74]
Length = 230
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 21/196 (10%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
K I G D+SF+K + ++ G IVVL L TL+ + E + PY+PG L+FRE P LL
Sbjct: 38 KTIAGCDISFNKFEETVYAG-IVVLQLDTLETIEEAGVVSTAPFPYIPGLLSFREIPSLL 96
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+K P V+M DG+G HPR G+ASH G+ N T G GK++
Sbjct: 97 EAWQKLKTE-----PDVVMFDGHGTAHPRRIGIASHAGLFLNRPTFGCGKSVLVGKYDEP 151
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
+ R + NE I G A+R T + + P+++S G+ I L+TA+ +
Sbjct: 152 APERGNWSPMRHYNEVI-----------GAALR-TKNKVNPVYVSPGNLIDLETAISLT- 198
Query: 275 MTCK--YRVPEPIRQA 288
+ C YR+PEP R+A
Sbjct: 199 LACDGGYRIPEPTRRA 214
>gi|294499425|ref|YP_003563125.1| Endonuclease V [Bacillus megaterium QM B1551]
gi|294349362|gb|ADE69691.1| Endonuclease V [Bacillus megaterium QM B1551]
Length = 239
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 18/209 (8%)
Query: 98 GGVDMSFSKEDPSIACGC-IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
GVD+++ +E+ C IVV+D QT +V + +S+ + VPY+PGFLAFRE P++L
Sbjct: 43 AGVDVAYWEENGVSYGACSIVVVDYQTKNVVEKVHSVGEVTVPYLPGFLAFRELPLILEA 102
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
++ P V + DGNG LH G+A+H N T+G+GK+ + G +
Sbjct: 103 AKKLQVE-----PDVFLFDGNGYLHYEHMGVATHASFFLNKPTVGIGKSYLKIKGYDYV- 156
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA--VMIVK 274
+ + EDI+ G +G +R T +KPIF+S G+ I LD + +M+
Sbjct: 157 ---MPEDAAGAYEDIVI----DGEVYGRVVR-TAKGVKPIFLSCGNYIDLDMSYQLMMHF 208
Query: 275 MTCKYRVPEPIRQADIRSRDYLQKH-QST 302
++ + ++P P+R AD+ + + +++ QST
Sbjct: 209 ISKESKLPIPVRLADLHTHELRKRYRQST 237
>gi|421451389|ref|ZP_15900754.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|396063438|gb|EJI71831.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
Length = 223
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAVVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + L + + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|288937706|ref|YP_003441765.1| deoxyribonuclease V [Klebsiella variicola At-22]
gi|288892415|gb|ADC60733.1| Deoxyribonuclease V [Klebsiella variicola At-22]
Length = 223
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 29/199 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E + +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGFEQEG-EVTRAAMVLLTWPELELVEYQVARVATTMPYIPGFLSFRETPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K
Sbjct: 90 WEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLMIDVPTIGVAKK----------- 133
Query: 217 VRQLLDAKENNNED--IIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
R E +E + PLM + W +R P+FIS GH + +D+A+M
Sbjct: 134 -RLCGKIGELGDEPGALAPLMDKNEQLAWVWRSKVRCN-----PLFISSGHRVGMDSALM 187
Query: 272 IVKMTCK-YRVPEPIRQAD 289
V+ + YR+PEP R AD
Sbjct: 188 WVERCMRGYRLPEPTRWAD 206
>gi|309790805|ref|ZP_07685349.1| Deoxyribonuclease V [Oscillochloris trichoides DG-6]
gi|308227092|gb|EFO80776.1| Deoxyribonuclease V [Oscillochloris trichoides DG6]
Length = 218
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 106/196 (54%), Gaps = 19/196 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ + GVD F ++D +A +VVL L L + + +PY+PG L+FREAP +
Sbjct: 29 LRSVAGVDAGF-EDDGRVARAAVVVLRLPDLTPIAYAVARQPAPLPYIPGLLSFREAPAI 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L+ + P +L+ DG G+ HPR FG+ASH+GV+ +++IG K L +
Sbjct: 88 LAALEQLAT-----PPDLLICDGQGIAHPRRFGIASHLGVVTGISSIGCAKTLLIGE--- 139
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
H V + + L+ G G+ +R+ T KP+F+S GH +S++ A ++
Sbjct: 140 HDAVPDVRGGRV--------LLVDRGEPVGMVLRTRSGT-KPVFVSPGHLVSIEQAADLV 190
Query: 273 VKMTCKYRVPEPIRQA 288
+ T +YR+PE R A
Sbjct: 191 LACTTRYRLPETTRYA 206
>gi|297567407|ref|YP_003686379.1| Deoxyribonuclease V [Meiothermus silvanus DSM 9946]
gi|296851856|gb|ADH64871.1| Deoxyribonuclease V [Meiothermus silvanus DSM 9946]
Length = 234
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 42/248 (16%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMS----FSKE 107
L + IQ E+++R+I + V ++Y+ G+D S FS++
Sbjct: 12 LAEAARIQKEMRERVIVAG-------------------DPVPVRYVAGLDASHPTRFSRQ 52
Query: 108 DPSIACGCIVVLDLQTLQIVYEDYSLLRLQ--VPYVPGFLAFREAPVLLSLLDNMKKRAN 165
++ V+ D Q ++V ++L + PYVPGFL+FREAP L+ + + +
Sbjct: 53 Q-GLSVAVAVLWDRQEQRVVEVAQAVLDAEKLFPYVPGFLSFREAPSYLAAVARLSRP-- 109
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE 225
P++L+VDG G+ HPRG G+A+H+GV +L IGV K+ L + + L A+
Sbjct: 110 ---PELLLVDGQGIAHPRGLGIAAHLGVHLDLPAIGVAKS------LLYGKPQGQLPAEA 160
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK-MTCKYRVPEP 284
+ IPL+ G G RS ++P+++S GH + L ++ V+ + K R+PEP
Sbjct: 161 GSA---IPLLDRWGQPMGYIYRSR-TGVQPLYVSPGHRVGLVESLEFVRSLPTKVRLPEP 216
Query: 285 IRQADIRS 292
+R A I +
Sbjct: 217 LRIAHIEA 224
>gi|444353755|ref|YP_007389899.1| Endonuclease V (EC 3.1.21.7) [Enterobacter aerogenes EA1509E]
gi|443904585|emb|CCG32359.1| Endonuclease V (EC 3.1.21.7) [Enterobacter aerogenes EA1509E]
Length = 224
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 100/194 (51%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F +E I +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 32 IGGADVGFEQEG-EITRAAMVLLTYPGLELVEYQVARVATTMPYIPGFLSFRETPALLAA 90
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ ++ P +L VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 91 WQQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RLCG 138
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L A+ +I W R P+FIS GH + +D+A+M V+
Sbjct: 139 KFEPLGAEPGALAPLIDKGDQLAWVWRSKARCN-----PLFISTGHRVGIDSALMWVERC 193
Query: 277 CK-YRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 194 MQGYRLPEPTRWAD 207
>gi|238790627|ref|ZP_04634392.1| Endonuclease V [Yersinia frederiksenii ATCC 33641]
gi|238721296|gb|EEQ12971.1| Endonuclease V [Yersinia frederiksenii ATCC 33641]
Length = 234
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 110/221 (49%), Gaps = 36/221 (16%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F ++ + I VL +L++V + + +PY+PG L+FRE P L
Sbjct: 29 VRFIAGADVGFEQQG-EVTRAAIAVLRYPSLELVEYQIARVATSLPYIPGLLSFREYPAL 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDG 211
L+ +++R P ++ VDG G+ HPR G+ASH G+L ++ TIGV K+ H
Sbjct: 88 LAAWQQLQQR-----PDLVFVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGHFQP 142
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
L E+ + + PL+ G G W R P+FIS GH +S++
Sbjct: 143 L------------ESESGALQPLVDGDEQLGWVWRSKARCN-----PLFISPGHRVSVNR 185
Query: 269 AVMIVK-MTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
A+ V+ YR+PEP R AD + + Q QRW
Sbjct: 186 ALEWVQHCMAGYRLPEPTRWADAIASNRPQ-------FQRW 219
>gi|163847901|ref|YP_001635945.1| deoxyribonuclease V [Chloroflexus aurantiacus J-10-fl]
gi|222525777|ref|YP_002570248.1| deoxyribonuclease V [Chloroflexus sp. Y-400-fl]
gi|163669190|gb|ABY35556.1| Deoxyribonuclease V [Chloroflexus aurantiacus J-10-fl]
gi|222449656|gb|ACM53922.1| Deoxyribonuclease V [Chloroflexus sp. Y-400-fl]
Length = 230
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 29/201 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAP 151
L+ + GVD F + D ++ +VV+ L L V DY+L+R V PYVPG LAFREAP
Sbjct: 34 LQLVAGVDAGF-EADGTLIRAAVVVVRLPDLAPV--DYALVRQPVTFPYVPGLLAFREAP 90
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HH 208
+++ + ++ P +++ DG+G+ HPR G+A HIGVL +L IG K
Sbjct: 91 AIIAAIRQLRT-----TPDLIICDGHGIAHPRRCGIACHIGVLLDLPAIGCAKQRLIGRF 145
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
+ L G R L + +D+I W V R+ T +P+FIS GH +SL+
Sbjct: 146 TEPLPERGDRSPL----YDGDDLI--------GWVVRTRA---TARPVFISPGHRVSLER 190
Query: 269 AV-MIVKMTCKYRVPEPIRQA 288
A +++ T ++R+PEP R A
Sbjct: 191 APDLVMACTTRFRLPEPTRLA 211
>gi|260596101|ref|YP_003208672.1| endonuclease V [Cronobacter turicensis z3032]
gi|429102869|ref|ZP_19164843.1| Endonuclease V [Cronobacter turicensis 564]
gi|260215278|emb|CBA27201.1| Endonuclease V [Cronobacter turicensis z3032]
gi|426289518|emb|CCJ90956.1| Endonuclease V [Cronobacter turicensis 564]
Length = 223
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYQVARIPTTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WEMLSRK-----PDLLFVDGHGISHPRRLGVASHFGMLVDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
++L E +++ + PLM G RS P+F+S GH +S+DTA+ V
Sbjct: 133 -KRLCGKFEPLSDEPGAVSPLM-DKGEQLAWVWRSK-ARCNPLFVSTGHRVSIDTALGWV 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ K YR+PEP R AD
Sbjct: 190 QRCTKGYRLPEPTRWAD 206
>gi|449096067|ref|YP_007428558.1| anion transporter [Bacillus subtilis XF-1]
gi|449029982|gb|AGE65221.1| anion transporter [Bacillus subtilis XF-1]
Length = 237
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 32/215 (14%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C CI+V+D T +I+ + +S+ R+ VPYV GFLAFRE P+++
Sbjct: 42 AGVDLAYWEQDGEPYGVC-CIIVIDADTKEIIEKVHSMGRISVPYVSGFLAFRELPLIIE 100
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H N TIG+ K + G
Sbjct: 101 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLNKPTIGIAKTYLKIKG---- 151
Query: 216 GVRQLLDAKENNNE-----DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
D NE DII G +G A+R+ D +KPIF+S G+ I L+++
Sbjct: 152 -----CDFVTPENEVGEYTDIII----DGEVYGRALRTRRD-VKPIFLSCGNNIDLESSY 201
Query: 271 MIV--KMTCKYRVPEPIRQADIRS---RDYLQKHQ 300
I + + R+P P+R AD+ + R + QK+
Sbjct: 202 QITLSLLNQESRLPIPVRLADLETHVLRTFYQKNH 236
>gi|423142655|ref|ZP_17130293.1| deoxyribonuclease V [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379049246|gb|EHY67141.1| deoxyribonuclease V [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 223
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K S
Sbjct: 89 AWEQLSQK-----PGLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLS 143
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
L A + E + W R P+FI+ GH +S D+A+ V+
Sbjct: 144 AEPGALSALMDKGEQL-------AWVWRSKARCN-----PLFIATGHRVSTDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|421080464|ref|ZP_15541387.1| Putative deoxyribonuclease V [Pectobacterium wasabiae CFBP 3304]
gi|401704804|gb|EJS95004.1| Putative deoxyribonuclease V [Pectobacterium wasabiae CFBP 3304]
Length = 229
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 27/199 (13%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E S+ I V+ +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-SVTRAAIAVMRYPSLELVEYKIARISTTMPYIPGFLSFRECPGLLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLT 213
++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+ + L
Sbjct: 90 AWALLEQK-----PDLLFVDGHGITHPRRLGVASHFGLLVDVPTIGVAKSRLCGRFEPLA 144
Query: 214 HS-GVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
S G +Q LLD E G W +R P+F++ GH +S D+A+
Sbjct: 145 ESVGSQQPLLDKGEQ-----------IGWVWRSKVRCN-----PLFVATGHRVSQDSALH 188
Query: 272 IVKMTCK-YRVPEPIRQAD 289
V+ + YR+PEP R AD
Sbjct: 189 WVQCCMRGYRLPEPTRWAD 207
>gi|183597475|ref|ZP_02958968.1| hypothetical protein PROSTU_00750 [Providencia stuartii ATCC 25827]
gi|188023225|gb|EDU61265.1| deoxyribonuclease V [Providencia stuartii ATCC 25827]
Length = 223
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ ++ I VL LQ+V + + Q+PY+PG L+FRE P L++
Sbjct: 30 FIGGADVGFEQQG-TVTRAVIAVLSWPDLQLVEYQIARVPTQLPYIPGLLSFREVPGLMA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ H P++++VDG G+ HPR FG+A H G+ A++ TIGV K+ + D
Sbjct: 89 AWQQL-----HHKPELVLVDGQGIAHPRRFGVACHFGLQADVPTIGVAKSRLYGD----- 138
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
+A PL G G +RS P+FIS GH +S+ + V+
Sbjct: 139 -----YEAVNEAPGSFQPLRHGENQL-GWVLRSK-KRCNPLFISPGHKMSVSASREWVER 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CLKGYRLPEPTRLAD 206
>gi|115372350|ref|ZP_01459659.1| endonuclease V [Stigmatella aurantiaca DW4/3-1]
gi|310819557|ref|YP_003951915.1| endonuclease v [Stigmatella aurantiaca DW4/3-1]
gi|115370563|gb|EAU69489.1| endonuclease V [Stigmatella aurantiaca DW4/3-1]
gi|309392629|gb|ADO70088.1| Endonuclease V [Stigmatella aurantiaca DW4/3-1]
Length = 227
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 19/193 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+S ++ ++ G VVLD +L+ V E + + L+ PYVPG L+FRE PVL++
Sbjct: 42 IAGADIS-TESGNALGYGGFVVLDAVSLRPVAEAGAAVELRFPYVPGLLSFRELPVLMAA 100
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
D ++++ P VL+ DG G+ HPR FGLA H G+L + +IG K+ L
Sbjct: 101 WDRLEQK-----PDVLIFDGQGIAHPRRFGLACHGGLLLGVPSIGCAKS------LLVGK 149
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKM 275
V L +A+ +E + G G+A+R T + P+++S GH + L TAV ++++
Sbjct: 150 VGPLGEARGETSE-----IQHRGEVVGMAVR-TRRGVSPVYVSPGHLMDLTTAVEWVLRV 203
Query: 276 TCKYRVPEPIRQA 288
+ +YR PE R A
Sbjct: 204 SPRYREPETTRHA 216
>gi|429089193|ref|ZP_19151925.1| Endonuclease V [Cronobacter universalis NCTC 9529]
gi|426508996|emb|CCK17037.1| Endonuclease V [Cronobacter universalis NCTC 9529]
Length = 223
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYQVARIPTTMPYIPGFLSFREYPALLTA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WEMLSRK-----PDLLFVDGHGISHPRRLGVASHFGMLVDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
++L E +++ + PLM G RS P+F+S GH +S+DTA+ V
Sbjct: 133 -KRLCGKFEPLSDEPGAVSPLM-DKGEQLAWVWRSK-ARCNPLFVSTGHRVSIDTALGWV 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ K YR+PEP R AD
Sbjct: 190 QRCTKGYRLPEPTRWAD 206
>gi|422015910|ref|ZP_16362502.1| endonuclease V [Providencia burhodogranariea DSM 19968]
gi|414096434|gb|EKT58092.1| endonuclease V [Providencia burhodogranariea DSM 19968]
Length = 223
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 110/198 (55%), Gaps = 25/198 (12%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ ++ IVVL LQ+V + + ++PY+PG L+FRE P L++
Sbjct: 30 FIGGADVGFEQQG-AVTRAVIVVLSWPDLQLVEYQIARVPTELPYIPGLLSFREVPGLIA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++ P +++VDG G+ HPR FG+A H G+ A++ TIGV K+ + D +S
Sbjct: 89 AWSQLNQK-----PDLVLVDGQGIAHPRRFGVACHFGLQADVPTIGVAKSRLYGD---YS 140
Query: 216 GVRQLLDAKE---NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
V + + + + +N E + G +RS P+FIS GH IS ++++
Sbjct: 141 QVDEEVGSTQPLVHNQEQL-----------GWVLRSK-KRCNPLFISPGHKISFESSLKW 188
Query: 273 VKMTCK-YRVPEPIRQAD 289
V+ + YR+PEP R AD
Sbjct: 189 VERCLQGYRLPEPTRFAD 206
>gi|238756049|ref|ZP_04617372.1| Endonuclease V [Yersinia ruckeri ATCC 29473]
gi|238705716|gb|EEP98110.1| Endonuclease V [Yersinia ruckeri ATCC 29473]
Length = 232
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 104/213 (48%), Gaps = 26/213 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ ++ I +L +L++V + + +PY+PG L+FRE P LL+
Sbjct: 32 IAGADVGFEQQG-AVTRAAIAILHYPSLELVEYQIAQVATTLPYIPGLLSFREYPALLAA 90
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+++R P +L+VDG G+ HPR G+ASH G+L ++ TIGV K+ G
Sbjct: 91 WAQLRQR-----PDLLLVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKS-------RLCG 138
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-KM 275
L + ++ G W R P+FIS GH I +++A+ V K
Sbjct: 139 QFSPLATAAGALQPLVDASAQLGWVWRSKARC-----NPLFISPGHRIGMESALAWVQKC 193
Query: 276 TCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
YR+PEP R AD + D LQRW
Sbjct: 194 MAGYRLPEPTRWADAIASD-------RPALQRW 219
>gi|204931280|ref|ZP_03222040.1| endonuclease V [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|452122072|ref|YP_007472320.1| endonuclease V [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
gi|204319895|gb|EDZ05102.1| endonuclease V [Salmonella enterica subsp. enterica serovar Javiana
str. GA_MM04042433]
gi|451911076|gb|AGF82882.1| endonuclease V [Salmonella enterica subsp. enterica serovar Javiana
str. CFSAN001992]
Length = 223
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PNLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + L + + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|145600978|ref|YP_001165054.1| endonuclease V [Yersinia pestis Pestoides F]
gi|162420980|ref|YP_001605065.1| endonuclease V [Yersinia pestis Angola]
gi|165928330|ref|ZP_02224162.1| endonuclease V [Yersinia pestis biovar Orientalis str. F1991016]
gi|165938138|ref|ZP_02226697.1| endonuclease V [Yersinia pestis biovar Orientalis str. IP275]
gi|166012047|ref|ZP_02232945.1| endonuclease V [Yersinia pestis biovar Antiqua str. E1979001]
gi|166214414|ref|ZP_02240449.1| endonuclease V [Yersinia pestis biovar Antiqua str. B42003004]
gi|167402420|ref|ZP_02307880.1| endonuclease V [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167422939|ref|ZP_02314692.1| endonuclease V [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167426828|ref|ZP_02318581.1| endonuclease V [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|170022610|ref|YP_001719115.1| endonuclease V [Yersinia pseudotuberculosis YPIII]
gi|186893652|ref|YP_001870764.1| endonuclease V [Yersinia pseudotuberculosis PB1/+]
gi|270488929|ref|ZP_06206003.1| deoxyribonuclease V [Yersinia pestis KIM D27]
gi|384123873|ref|YP_005506493.1| endonuclease V (deoxyinosine 3endoduclease) [Yersinia pestis
D106004]
gi|21957195|gb|AAM84086.1|AE013650_11 endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
KIM10+]
gi|45437716|gb|AAS63266.1| endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
biovar Microtus str. 91001]
gi|108774046|gb|ABG16565.1| Endonuclease V [Yersinia pestis Nepal516]
gi|108781510|gb|ABG15568.1| Endonuclease V [Yersinia pestis Antiqua]
gi|145212674|gb|ABP42081.1| Endonuclease V [Yersinia pestis Pestoides F]
gi|162353795|gb|ABX87743.1| endonuclease V [Yersinia pestis Angola]
gi|165913799|gb|EDR32417.1| endonuclease V [Yersinia pestis biovar Orientalis str. IP275]
gi|165919669|gb|EDR37002.1| endonuclease V [Yersinia pestis biovar Orientalis str. F1991016]
gi|165989042|gb|EDR41343.1| endonuclease V [Yersinia pestis biovar Antiqua str. E1979001]
gi|166204418|gb|EDR48898.1| endonuclease V [Yersinia pestis biovar Antiqua str. B42003004]
gi|166957150|gb|EDR55171.1| endonuclease V [Yersinia pestis biovar Orientalis str. MG05-1020]
gi|167048200|gb|EDR59608.1| endonuclease V [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054210|gb|EDR64035.1| endonuclease V [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|169749144|gb|ACA66662.1| Deoxyribonuclease V [Yersinia pseudotuberculosis YPIII]
gi|186696678|gb|ACC87307.1| Endonuclease V [Yersinia pseudotuberculosis PB1/+]
gi|262363469|gb|ACY60190.1| endonuclease V (deoxyinosine 3endoduclease) [Yersinia pestis
D106004]
gi|270337433|gb|EFA48210.1| deoxyribonuclease V [Yersinia pestis KIM D27]
Length = 246
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 42/224 (18%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F + I I +L +L +V + + +PY+PG L+FRE P L
Sbjct: 41 VRFIAGADVGFEQHG-EITRAAIAILRYPSLALVEYQVARVATSLPYIPGLLSFREYPAL 99
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-------- 205
L+ +++R P +++VDG G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 100 LAAWAQLQQR-----PDLILVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGDFLP 154
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
LH G V+ L D N+E + G W +R P+FIS GH +S
Sbjct: 155 LHQDVG----AVQPLFD----NDEQL-------GWVWRSKIRCN-----PLFISPGHRVS 194
Query: 266 LDTAVMIV-KMTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
+ +A+ V + YR+PEP R AD + + Q QRW
Sbjct: 195 VGSALAWVQRCMAGYRLPEPTRWADAIASNRPQ-------FQRW 231
>gi|161617307|ref|YP_001591272.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|167553828|ref|ZP_02347572.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|168234410|ref|ZP_02659468.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168245124|ref|ZP_02670056.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168467900|ref|ZP_02701737.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|194444563|ref|YP_002043416.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194451186|ref|YP_002048153.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194469140|ref|ZP_03075124.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205354430|ref|YP_002228231.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207859346|ref|YP_002245997.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375125312|ref|ZP_09770476.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378957019|ref|YP_005214506.1| putative endonuclease V [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|386589498|ref|YP_006085898.1| Endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|418759886|ref|ZP_13316062.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|418764392|ref|ZP_13320491.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|418769317|ref|ZP_13325349.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|418773542|ref|ZP_13329516.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|418782323|ref|ZP_13338188.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|418786266|ref|ZP_13342083.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|418789998|ref|ZP_13345779.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|418792567|ref|ZP_13348309.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|418800326|ref|ZP_13355985.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|418802165|ref|ZP_13357795.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|418807365|ref|ZP_13362926.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|418811528|ref|ZP_13367055.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|418818414|ref|ZP_13373889.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|418823847|ref|ZP_13379245.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|418827792|ref|ZP_13382908.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|418829233|ref|ZP_13384218.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|418835411|ref|ZP_13390305.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|418838994|ref|ZP_13393835.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|418847595|ref|ZP_13402346.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|418849569|ref|ZP_13404299.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|418854369|ref|ZP_13409046.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|418856892|ref|ZP_13411527.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|418864849|ref|ZP_13419368.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|418870651|ref|ZP_13425064.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|419730172|ref|ZP_14257122.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735318|ref|ZP_14262199.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419740985|ref|ZP_14267698.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419744947|ref|ZP_14271594.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419749948|ref|ZP_14276418.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419789778|ref|ZP_14315457.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|419795507|ref|ZP_14321105.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|421356405|ref|ZP_15806732.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421362945|ref|ZP_15813191.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421368319|ref|ZP_15818511.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421371946|ref|ZP_15822099.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421374721|ref|ZP_15824843.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421383005|ref|ZP_15833048.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385768|ref|ZP_15835787.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421391327|ref|ZP_15841297.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421395287|ref|ZP_15845225.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421397156|ref|ZP_15847077.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405480|ref|ZP_15855311.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421410169|ref|ZP_15859952.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421414706|ref|ZP_15864444.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421419625|ref|ZP_15869316.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421422819|ref|ZP_15872486.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421424571|ref|ZP_15874212.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421432364|ref|ZP_15881937.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421433363|ref|ZP_15882926.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421437875|ref|ZP_15887383.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421442393|ref|ZP_15891847.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421568866|ref|ZP_16014575.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421573656|ref|ZP_16019290.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421580999|ref|ZP_16026549.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421583115|ref|ZP_16028640.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|421887749|ref|ZP_16318893.1| hypothetical protein SS209_04882 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|436614405|ref|ZP_20514092.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|436703298|ref|ZP_20518425.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|436801918|ref|ZP_20525201.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436805456|ref|ZP_20526197.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436816331|ref|ZP_20533776.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436846577|ref|ZP_20539364.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436852513|ref|ZP_20542751.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436858596|ref|ZP_20547067.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436865764|ref|ZP_20551705.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436874696|ref|ZP_20556995.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436879480|ref|ZP_20559613.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436889406|ref|ZP_20565313.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436892625|ref|ZP_20566790.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436899954|ref|ZP_20571125.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436912962|ref|ZP_20578591.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436916698|ref|ZP_20580444.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436923133|ref|ZP_20584981.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436936749|ref|ZP_20592141.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436944417|ref|ZP_20596959.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436954989|ref|ZP_20602083.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436963283|ref|ZP_20605769.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436970142|ref|ZP_20608819.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436977659|ref|ZP_20612376.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436995444|ref|ZP_20619210.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437009084|ref|ZP_20623655.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437022208|ref|ZP_20628244.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437031757|ref|ZP_20631626.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437046247|ref|ZP_20638161.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437047138|ref|ZP_20638707.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437054558|ref|ZP_20643118.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437070018|ref|ZP_20651406.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437071479|ref|ZP_20652152.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437084278|ref|ZP_20659635.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437087494|ref|ZP_20661150.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437099774|ref|ZP_20665772.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437124064|ref|ZP_20673153.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437133305|ref|ZP_20678398.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437140954|ref|ZP_20682890.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437149303|ref|ZP_20688139.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437150108|ref|ZP_20688596.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437161430|ref|ZP_20695435.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437168227|ref|ZP_20699103.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437178400|ref|ZP_20704648.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437183419|ref|ZP_20707767.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437202012|ref|ZP_20711922.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|437257898|ref|ZP_20716230.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437266009|ref|ZP_20720764.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437273685|ref|ZP_20724833.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437285957|ref|ZP_20729950.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437305057|ref|ZP_20734129.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437333997|ref|ZP_20742665.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437340454|ref|ZP_20744367.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437350864|ref|ZP_20747416.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437413690|ref|ZP_20753567.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437444271|ref|ZP_20758252.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437469107|ref|ZP_20764706.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437485687|ref|ZP_20769681.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437499948|ref|ZP_20774135.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437516745|ref|ZP_20778235.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437532690|ref|ZP_20780929.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437561729|ref|ZP_20786379.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437576162|ref|ZP_20790512.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437597627|ref|ZP_20796667.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437603747|ref|ZP_20798735.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437613124|ref|ZP_20801403.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437640629|ref|ZP_20807788.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437662659|ref|ZP_20813543.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437680508|ref|ZP_20818399.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437692476|ref|ZP_20821204.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437704825|ref|ZP_20824793.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437725914|ref|ZP_20829831.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437787056|ref|ZP_20836933.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437806638|ref|ZP_20839604.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437834392|ref|ZP_20844980.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|437887545|ref|ZP_20849118.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438082326|ref|ZP_20857746.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438103074|ref|ZP_20865231.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438116666|ref|ZP_20871016.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438122871|ref|ZP_20872355.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445134717|ref|ZP_21383025.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445172875|ref|ZP_21396663.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445190090|ref|ZP_21399527.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445230880|ref|ZP_21405579.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445241648|ref|ZP_21407718.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445335200|ref|ZP_21415441.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445348437|ref|ZP_21419642.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445363079|ref|ZP_21424483.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|189029074|sp|A9N0L0.1|NFI_SALPB RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730064|sp|B5QYF3.1|NFI_SALEP RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730065|sp|B5RFI6.1|NFI_SALG2 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730066|sp|B4TCT7.1|NFI_SALHS RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730067|sp|B4T100.1|NFI_SALNS RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|161366671|gb|ABX70439.1| hypothetical protein SPAB_05158 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403226|gb|ACF63448.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
gi|194409490|gb|ACF69709.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455504|gb|EDX44343.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|195629001|gb|EDX48393.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|205274211|emb|CAR39229.1| putative endonuclease V [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205321818|gb|EDZ09657.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205331647|gb|EDZ18411.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205336109|gb|EDZ22873.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|206711149|emb|CAR35523.1| putative endonuclease V [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326629562|gb|EGE35905.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|357207630|gb|AET55676.1| putative endonuclease V [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|379982681|emb|CCF91166.1| hypothetical protein SS209_04882 [Salmonella enterica subsp.
enterica serovar Senftenberg str. SS209]
gi|381293340|gb|EIC34510.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381294827|gb|EIC35955.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381295191|gb|EIC36310.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381307240|gb|EIC48102.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381307959|gb|EIC48805.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383796542|gb|AFH43624.1| Endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392612598|gb|EIW95068.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. Levine 15]
gi|392614902|gb|EIW97343.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. Levine 1]
gi|392739975|gb|EIZ97102.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21539]
gi|392743205|gb|EJA00280.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35199]
gi|392744344|gb|EJA01398.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35188]
gi|392745024|gb|EJA02060.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35185]
gi|392748724|gb|EJA05708.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21559]
gi|392753227|gb|EJA10164.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 33953]
gi|392759264|gb|EJA16118.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19447]
gi|392761242|gb|EJA18069.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19567]
gi|392767432|gb|EJA24199.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19449]
gi|392778531|gb|EJA35208.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22513]
gi|392778549|gb|EJA35225.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 35202]
gi|392779572|gb|EJA36237.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21550]
gi|392784546|gb|EJA41143.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22425]
gi|392785496|gb|EJA42068.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21538]
gi|392796706|gb|EJA53035.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 22462]
gi|392803637|gb|EJA59826.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM N1543]
gi|392804704|gb|EJA60851.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM N18486]
gi|392807288|gb|EJA63365.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19443]
gi|392814168|gb|EJA70130.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 21554]
gi|392820910|gb|EJA76745.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 37978]
gi|392824783|gb|EJA80550.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19593]
gi|392829643|gb|EJA85311.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19536]
gi|392829937|gb|EJA85596.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 4176]
gi|392835617|gb|EJA91209.1| endonuclease V [Salmonella enterica subsp. enterica serovar Newport
str. CVM 19470]
gi|395985268|gb|EJH94440.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395988730|gb|EJH97877.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395994191|gb|EJI03269.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395996415|gb|EJI05463.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396002033|gb|EJI11039.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396007306|gb|EJI16263.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396012027|gb|EJI20926.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396012809|gb|EJI21701.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015708|gb|EJI24581.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396022836|gb|EJI31644.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396023723|gb|EJI32518.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396034641|gb|EJI43329.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035169|gb|EJI43846.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396035220|gb|EJI43895.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396039112|gb|EJI47741.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396050323|gb|EJI58851.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396059759|gb|EJI68208.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396062477|gb|EJI70889.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396073943|gb|EJI82236.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396074909|gb|EJI83189.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|402518543|gb|EJW25921.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402527109|gb|EJW34373.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402529185|gb|EJW36426.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402532371|gb|EJW39567.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|434943030|gb|ELL49217.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434957719|gb|ELL51338.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434968054|gb|ELL60813.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434970260|gb|ELL62887.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434972496|gb|ELL64952.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434977672|gb|ELL69777.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434984831|gb|ELL76545.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434988977|gb|ELL80557.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434994635|gb|ELL85972.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|434994682|gb|ELL86007.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE30663]
gi|434996794|gb|ELL88090.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435006566|gb|ELL97452.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435007752|gb|ELL98592.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435020564|gb|ELM10962.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435022621|gb|ELM12928.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435025034|gb|ELM15217.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435032750|gb|ELM22674.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435037489|gb|ELM27294.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435040299|gb|ELM30057.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435042197|gb|ELM31925.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435046353|gb|ELM35969.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435048972|gb|ELM38517.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435058378|gb|ELM47717.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435063114|gb|ELM52280.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435067347|gb|ELM56397.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435070323|gb|ELM59314.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435077179|gb|ELM65945.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435078275|gb|ELM67008.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435080257|gb|ELM68940.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435091568|gb|ELM79954.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435099699|gb|ELM87893.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435101467|gb|ELM89619.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435106770|gb|ELM94786.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435111533|gb|ELM99427.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435118018|gb|ELN05700.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435120633|gb|ELN08203.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435120990|gb|ELN08549.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435125710|gb|ELN13148.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435129505|gb|ELN16799.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435130483|gb|ELN17722.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435145246|gb|ELN32066.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435146685|gb|ELN33476.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435150288|gb|ELN36967.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435153246|gb|ELN39859.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435162758|gb|ELN48917.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435166913|gb|ELN52861.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435177044|gb|ELN62389.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435177314|gb|ELN62645.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435184891|gb|ELN69806.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435187312|gb|ELN72087.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435187572|gb|ELN72326.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435194567|gb|ELN79004.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435202859|gb|ELN86668.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435210512|gb|ELN93767.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435213321|gb|ELN96229.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435214305|gb|ELN97125.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435215201|gb|ELN97915.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435215917|gb|ELN98400.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435223143|gb|ELO05178.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435228579|gb|ELO10004.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435237561|gb|ELO18229.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435242890|gb|ELO23192.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435243995|gb|ELO24238.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435248761|gb|ELO28613.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435258082|gb|ELO37351.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435264627|gb|ELO43533.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435267411|gb|ELO46114.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435271590|gb|ELO50045.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435276806|gb|ELO54800.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435279840|gb|ELO57583.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435292284|gb|ELO69056.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435292869|gb|ELO69611.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435296387|gb|ELO72773.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435301265|gb|ELO77303.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435301283|gb|ELO77320.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435320739|gb|ELO93245.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435323343|gb|ELO95405.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435327546|gb|ELO99219.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435329287|gb|ELP00729.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|444846576|gb|ELX71740.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444860094|gb|ELX85022.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444863959|gb|ELX88771.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444868700|gb|ELX93317.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444874501|gb|ELX98742.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444876191|gb|ELY00374.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444883854|gb|ELY07715.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444890944|gb|ELY14234.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 223
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + L + + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|392969625|ref|ZP_10335040.1| Deoxyribonuclease V [Fibrisoma limi BUZ 3]
gi|387841819|emb|CCH57098.1| Deoxyribonuclease V [Fibrisoma limi BUZ 3]
Length = 229
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 19/196 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ I G D+SF+K + ++ G IVVL L TL++V E + PYVPG L+FRE P L
Sbjct: 37 VETIAGCDISFNKFEETVYAG-IVVLQLDTLEVVEEVGVISTATFPYVPGLLSFREGPAL 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L +K P V+M DG G+ HPR G+ASH+G+ + G K++
Sbjct: 96 LDAWAKLK-----IEPDVVMFDGQGIAHPRRIGIASHMGLFIDRPAFGCAKSV------- 143
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
+ D + P++ G A+R T D + P+++S GH I ++TA+ +
Sbjct: 144 ---LVGKYDEPAPERGNWSPMVHYR-EVIGAALR-TKDKVNPVYVSPGHLIDMETAIDLT 198
Query: 273 VKMTCKYRVPEPIRQA 288
++ YR+PEP R+A
Sbjct: 199 LRCNGGYRIPEPTRRA 214
>gi|253987883|ref|YP_003039239.1| endonuclease V (deoxyinosine 3'endoduclease) [Photorhabdus
asymbiotica]
gi|253779333|emb|CAQ82494.1| endonuclease V (deoxyinosine 3'endoduclease) [Photorhabdus
asymbiotica]
Length = 222
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 101/202 (50%), Gaps = 31/202 (15%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
K I G D+ F ++ I IVVL L++V + + +PY+PG L+FRE P L+
Sbjct: 28 KLIAGADVGFEQQG-RITRAAIVVLSYPELELVEYQMARIETTLPYIPGLLSFREYPALM 86
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ +K P ++MVDG+G+ HPR G+ASH G+L N+ TIGV K
Sbjct: 87 AAWQLLKHT-----PDLVMVDGHGIAHPRRLGVASHFGLLTNVPTIGVAK---------- 131
Query: 215 SGVRQLLDAKENNNE---DIIPLMGGS---GSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
R+L E E PLM G W R P++IS GH ISL++
Sbjct: 132 ---RRLCGESEPLGEQPGSCQPLMDKEEQIGWVWRSKKRCN-----PLYISTGHKISLNS 183
Query: 269 AVMIVKMTCK-YRVPEPIRQAD 289
A++ V+ K YR+PE R AD
Sbjct: 184 ALLWVERCVKGYRLPETTRWAD 205
>gi|384127733|ref|YP_005510347.1| endonuclease V [Yersinia pestis D182038]
gi|262367397|gb|ACY63954.1| endonuclease V [Yersinia pestis D182038]
Length = 246
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 42/224 (18%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F + I I +L +L +V + + +PY+PG L+FRE P L
Sbjct: 41 VRFIAGADVGFEQHG-EITRAAIAILRYPSLALVEYQVARVATSLPYIPGLLSFREYPAL 99
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-------- 205
L+ +++R P +++VDG G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 100 LAAWAQLQQR-----PDLILVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGDFLP 154
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
LH G V+ L D N+E + G W +R P+FIS GH +S
Sbjct: 155 LHQDVG----AVQPLFD----NDEQL-------GWVWRSKIRCN-----PLFISPGHRVS 194
Query: 266 LDTAVMIV-KMTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
+ +A+ V + YR+PEP R AD + + Q QRW
Sbjct: 195 VGSALAWVQRCMAGYRLPEPTRWADAIASNRPQ-------FQRW 231
>gi|365846034|ref|ZP_09386542.1| deoxyribonuclease V [Yokenella regensburgei ATCC 43003]
gi|364574580|gb|EHM52032.1| deoxyribonuclease V [Yokenella regensburgei ATCC 43003]
Length = 223
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 102/196 (52%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
K IGG D+ F +E + +V+L +L++V + + +PY+PGFL+FREAP L+
Sbjct: 29 KIIGGADVGF-EEGGEVTRAAMVLLKYPSLELVEYQVARIATTMPYIPGFLSFREAPALM 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
++ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AVWQLLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L + +I W R P+FIS GH +S D+A+ V+
Sbjct: 136 CGKFEPLSPEPGALAPLIDKGEQLAWVWRSKARCN-----PLFISTGHRVSQDSALAWVQ 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 RCMKGYRLPEPTRWAD 206
>gi|168239594|ref|ZP_02664652.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194735033|ref|YP_002117069.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|375004040|ref|ZP_09728376.1| deoxyribonuclease V [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|416422401|ref|ZP_11690264.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416435121|ref|ZP_11698002.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416436166|ref|ZP_11698207.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416448234|ref|ZP_11706241.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416454223|ref|ZP_11710194.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416461343|ref|ZP_11715262.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416464738|ref|ZP_11716439.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416475696|ref|ZP_11720791.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416487906|ref|ZP_11725709.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416497274|ref|ZP_11729617.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416510744|ref|ZP_11737294.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416518376|ref|ZP_11739779.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416531456|ref|ZP_11745599.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416539399|ref|ZP_11749950.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416547571|ref|ZP_11754638.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416554423|ref|ZP_11758258.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416560470|ref|ZP_11761248.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416567686|ref|ZP_11764358.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|416575461|ref|ZP_11768440.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416583011|ref|ZP_11773059.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416594803|ref|ZP_11780618.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416596167|ref|ZP_11781216.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416609157|ref|ZP_11789827.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416609882|ref|ZP_11789894.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416622527|ref|ZP_11797020.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416626592|ref|ZP_11798689.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416643340|ref|ZP_11806013.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416649877|ref|ZP_11810131.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416658641|ref|ZP_11814403.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416665682|ref|ZP_11816888.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416678607|ref|ZP_11822695.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416694882|ref|ZP_11827418.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416705733|ref|ZP_11831097.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416711248|ref|ZP_11835091.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416717288|ref|ZP_11839548.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416725473|ref|ZP_11845823.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416728534|ref|ZP_11847596.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416738896|ref|ZP_11853574.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416747347|ref|ZP_11858219.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416755523|ref|ZP_11862097.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416765970|ref|ZP_11869092.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416772604|ref|ZP_11873388.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418482292|ref|ZP_13051313.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418492930|ref|ZP_13059405.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418493004|ref|ZP_13059473.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418500378|ref|ZP_13066775.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418502140|ref|ZP_13068515.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418510280|ref|ZP_13076563.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418526611|ref|ZP_13092584.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|226730069|sp|B4TQK8.1|NFI_SALSV RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|194710535|gb|ACF89756.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197287726|gb|EDY27117.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|322616277|gb|EFY13187.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322617280|gb|EFY14182.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625948|gb|EFY22763.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626654|gb|EFY23456.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322631489|gb|EFY28246.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635202|gb|EFY31920.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642593|gb|EFY39189.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646804|gb|EFY43308.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650802|gb|EFY47195.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322655898|gb|EFY52199.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657297|gb|EFY53576.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322665559|gb|EFY61744.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669742|gb|EFY65887.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322670979|gb|EFY67111.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322679197|gb|EFY75250.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322679355|gb|EFY75402.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322688122|gb|EFY84086.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323193390|gb|EFZ78600.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323200690|gb|EFZ85763.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323202179|gb|EFZ87235.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323211615|gb|EFZ96452.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218047|gb|EGA02760.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221336|gb|EGA05758.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323225737|gb|EGA09958.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230975|gb|EGA15092.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235757|gb|EGA19839.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240071|gb|EGA24117.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323242596|gb|EGA26618.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249696|gb|EGA33603.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323252579|gb|EGA36420.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323256927|gb|EGA40639.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323262050|gb|EGA45614.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323263944|gb|EGA47458.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323268443|gb|EGA51913.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|353073918|gb|EHB39682.1| deoxyribonuclease V [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|363548547|gb|EHL32916.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363549357|gb|EHL33712.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363559212|gb|EHL43386.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363560488|gb|EHL44632.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363561362|gb|EHL45483.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363574862|gb|EHL58723.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|363578520|gb|EHL62326.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|366054529|gb|EHN18880.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366064103|gb|EHN28308.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366065611|gb|EHN29798.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366069024|gb|EHN33153.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366075964|gb|EHN40007.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366076969|gb|EHN40997.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366828579|gb|EHN55463.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372205462|gb|EHP18973.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 223
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + L + + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|251791424|ref|YP_003006145.1| endonuclease V [Dickeya zeae Ech1591]
gi|247540045|gb|ACT08666.1| Deoxyribonuclease V [Dickeya zeae Ech1591]
Length = 224
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 89 EEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFR 148
E+ VL I G D+ F +E ++ + VL +LQ+V + + +PY+PGFL+FR
Sbjct: 26 EQPVL---IAGADVGFEQEG-AVTRAAVAVLAYPSLQLVEYQIARIPTVMPYIPGFLSFR 81
Query: 149 EAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHH 208
E P LL+ ++ + P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 82 EYPALLAAWKQLQHQ-----PDLLFVDGHGVSHPRRLGVASHFGLLVDVPTIGVAKR--- 133
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
G L +++ ++ G W R P+F+S GH + +D+
Sbjct: 134 ----RLCGQFSPLADAVGSHQPLLDKDEQIGWVWRSKARCN-----PLFVSTGHRVGMDS 184
Query: 269 AVMIVKMTC--KYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
A+ V M C YR+PEP R AD + D QRWQ
Sbjct: 185 ALQWV-MRCMRGYRLPEPTRWADAVASD-------RPAFQRWQ 219
>gi|429082256|ref|ZP_19145342.1| Endonuclease V [Cronobacter condimenti 1330]
gi|426549063|emb|CCJ71383.1| Endonuclease V [Cronobacter condimenti 1330]
Length = 223
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L +L+++ + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPSLELLEYQVARIPTTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WEMLSRK-----PDLLFVDGHGISHPRRLGVASHFGMLVDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
++L E +++ + PLM G RS P+F+S GH +S+DTA+ V
Sbjct: 133 -KRLCGKFEPLSDEPGAVAPLM-DKGEQLAWVWRSK-ARCNPLFVSTGHRVSIDTALGWV 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ K YR+PEP R AD
Sbjct: 190 QRCTKGYRLPEPTRWAD 206
>gi|429092125|ref|ZP_19154770.1| Endonuclease V [Cronobacter dublinensis 1210]
gi|429099095|ref|ZP_19161201.1| Endonuclease V [Cronobacter dublinensis 582]
gi|426285435|emb|CCJ87314.1| Endonuclease V [Cronobacter dublinensis 582]
gi|426743181|emb|CCJ80883.1| Endonuclease V [Cronobacter dublinensis 1210]
Length = 223
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 106/197 (53%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYQVARIPTTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + + P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WEMLSTK-----PDLLFVDGHGISHPRRLGVASHFGMLVDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
++L E +++ + PLM G RS P+F+S GH +S+DTA+ V
Sbjct: 133 -KRLCGKFEPLSDEPGAVAPLM-DKGEQLAWVWRSK-ARCNPLFVSTGHRVSIDTALGWV 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ K YR+PEP R AD
Sbjct: 190 QRCTKGYRLPEPTRWAD 206
>gi|300773543|ref|ZP_07083412.1| deoxyribonuclease V [Sphingobacterium spiritivorum ATCC 33861]
gi|300759714|gb|EFK56541.1| deoxyribonuclease V [Sphingobacterium spiritivorum ATCC 33861]
Length = 235
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 119/241 (49%), Gaps = 43/241 (17%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + TEIQ++L+ +L ++ P++ T IGG D+S++K I
Sbjct: 8 LPEATEIQEDLRHKL------RFDRPDAQVIYT------------IGGADISYNKGS-EI 48
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
IV+L+ + + + PY+PG+LAFRE P LL+ + R P V
Sbjct: 49 LYAAIVILNYPDMTLRSYALATGHSSFPYIPGYLAFREVPALLNAWSLLPVR-----PDV 103
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNN 228
L++DG G+LHPR G+ASH GVL TIG KN H D G
Sbjct: 104 LVLDGQGILHPRQMGIASHFGVLTGQATIGCAKNSLYGRHADLARFKGSST--------- 154
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM-TCKYRVPEPIRQ 287
P++ G G +R T + +KP+FIS G+ +S++ ++ +++ T +YR+PEP R
Sbjct: 155 ----PIVDGV-KHIGHLLR-TKEAVKPVFISPGYGLSVNKSLEVIRQSTGRYRIPEPTRL 208
Query: 288 A 288
A
Sbjct: 209 A 209
>gi|221632829|ref|YP_002522051.1| endonuclease V [Thermomicrobium roseum DSM 5159]
gi|221156278|gb|ACM05405.1| endonuclease V [Thermomicrobium roseum DSM 5159]
Length = 242
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 99/203 (48%), Gaps = 26/203 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVL---------DLQTLQIVYEDYSLLRLQVPYVPGFL 145
++I G DM E C +L D L+ V + ++ PY+PGFL
Sbjct: 42 RFIAGADMHLRGERAVAVAVCFELLSEPTSDEATDFLPLREVERAIAEQKVTFPYIPGFL 101
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+FREAPV++ + RA P +L+VDG G HPR GLASH+GVL +L TIG K+
Sbjct: 102 SFREAPVIIEAV-----RALEQTPDLLVVDGQGRAHPRRCGLASHVGVLLDLPTIGAAKS 156
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
+ G + E+II G A+R+ P +P+ +SVGH I+
Sbjct: 157 RLY-GSYREPGPNRGAWTPLVAEEEII----------GAAVRTRPSA-RPLIVSVGHRIT 204
Query: 266 LDTAVMIVKMTCKYRVPEPIRQA 288
L A+ V +YR+PEP R A
Sbjct: 205 LLEAIRWVLRLSRYRIPEPTRWA 227
>gi|51594650|ref|YP_068841.1| endonuclease V [Yersinia pseudotuberculosis IP 32953]
gi|153950857|ref|YP_001402799.1| endonuclease V [Yersinia pseudotuberculosis IP 31758]
gi|56404347|sp|Q66FP0.1|NFI_YERPS RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|167016290|sp|A7FNH1.1|NFI_YERP3 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|51587932|emb|CAH19535.1| endonuclease V [Yersinia pseudotuberculosis IP 32953]
gi|152962352|gb|ABS49813.1| endonuclease V [Yersinia pseudotuberculosis IP 31758]
Length = 234
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 110/221 (49%), Gaps = 34/221 (15%)
Query: 93 LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+++I G D+ F + I I +L +L +V + + +PY+PG L+FRE P
Sbjct: 28 FVRFIAGADVGFEQHG-EITRAAIAILRYPSLALVEYQVARVATSLPYIPGLLSFREYPA 86
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
LL+ +++R P +++VDG G+ HPR G+ASH G+L ++ TIGV K+ D L
Sbjct: 87 LLAAWAQLQQR-----PDLILVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGDFL 141
Query: 213 TH----SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
V+ L D N+E + G W +R P+FIS GH +S+ +
Sbjct: 142 PLHQDVGAVQPLFD----NDEQL-------GWVWRSKIRCN-----PLFISPGHRVSVGS 185
Query: 269 AVMIV-KMTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
A+ V + YR+PEP R AD + + Q QRW
Sbjct: 186 ALAWVQRCMAGYRLPEPTRWADAIASNRPQ-------FQRW 219
>gi|365102044|ref|ZP_09332582.1| endonuclease V [Citrobacter freundii 4_7_47CFAA]
gi|363646543|gb|EHL85785.1| endonuclease V [Citrobacter freundii 4_7_47CFAA]
Length = 226
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + IV+L TL++V + + +PY+PGFL+FRE P L++
Sbjct: 31 IGGADVGF-EQGGEVTRAAIVLLKYPTLELVEYKVARIATTMPYIPGFLSFRETPALMAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ F P +L VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WQLLS-----FKPDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L A+ + PL+ G RS P+FIS GH +S+D+A+ V+
Sbjct: 138 KFEPLAAEPGA---LAPLL-DKGEQLAWVWRSK-ARCNPLFISTGHRVSMDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
YR+PEP R AD
Sbjct: 193 MNGYRLPEPTRWAD 206
>gi|383319596|ref|YP_005380437.1| Endonuclease V [Methanocella conradii HZ254]
gi|379320966|gb|AFC99918.1| Endonuclease V [Methanocella conradii HZ254]
Length = 211
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 104/201 (51%), Gaps = 38/201 (18%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+K IGG D S+ D + G +VVLD + L+ VY +S+ RL PYVPG LA+REA L
Sbjct: 26 VKRIGGADCSYL--DDELVIGGLVVLDYEGLKPVYRTFSVQRLAFPYVPGLLAYREAGAL 83
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDG 211
+ + K + VLMVDG G HPR G+A+HIGV ++ IGVGK+ + G
Sbjct: 84 MEAVQEAKVGFD-----VLMVDGFGANHPRRCGIATHIGVKLDVPAIGVGKSFLCGEIKG 138
Query: 212 --LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLK-PIFISVGHCISLDT 268
+ G R VA P LK PI++S GH ISL+T
Sbjct: 139 EYVYQDGER-------------------------VAKMLYPKGLKRPIYVSPGHRISLET 173
Query: 269 AVMIVKMTCKY-RVPEPIRQA 288
A IV ++ K R+PEP+R A
Sbjct: 174 AAGIVLVSIKKGRLPEPLRLA 194
>gi|377579839|ref|ZP_09808799.1| endonuclease V [Escherichia hermannii NBRC 105704]
gi|377538845|dbj|GAB53964.1| endonuclease V [Escherichia hermannii NBRC 105704]
Length = 223
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 25/199 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 RLIAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYQVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
D + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 KAWDMLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAK---------- 132
Query: 215 SGVRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
++L E +E+ + PLM G RS P+FI+ GH +S D+A++
Sbjct: 133 ---KRLCGKFEPLDEELGALAPLM-DKGEQLAWVWRSK-KRCNPLFIATGHRVSQDSALL 187
Query: 272 IV-KMTCKYRVPEPIRQAD 289
V + YR+PEP R AD
Sbjct: 188 WVQRCMAGYRLPEPTRWAD 206
>gi|340001554|ref|YP_004732438.1| endonuclease [Salmonella bongori NCTC 12419]
gi|339514916|emb|CCC32687.1| putative endonuclease [Salmonella bongori NCTC 12419]
Length = 223
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 110/212 (51%), Gaps = 21/212 (9%)
Query: 79 STTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV 138
S+ T E++ L IGG D+ F ++ + +V+L +L++V + + +
Sbjct: 15 SSVCRTDQFEKDPPAL--IGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTM 71
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PY+PGFL+FRE P LL+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++
Sbjct: 72 PYIPGFLSFREYPALLAAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVP 126
Query: 199 TIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
TIGV K G L A+ + PLM G RS P+F+
Sbjct: 127 TIGVAKK-------RLCGKFAPLSAEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFV 174
Query: 259 SVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
+ GH +S D+A+ V+ K YR+PEP R AD
Sbjct: 175 ATGHRVSTDSALAWVQRCMKGYRLPEPTRWAD 206
>gi|227328379|ref|ZP_03832403.1| endonuclease V [Pectobacterium carotovorum subsp. carotovorum
WPP14]
Length = 229
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 23/197 (11%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E S+ I V+ +L+++ + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-SVTRAAIAVMRYPSLELIEYKIARISTTMPYIPGFLSFRECPGLLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 90 AWALLEQK-----PDLLFVDGHGVSHPRRLGVASHFGLLVDVPTIGVAKS---------- 134
Query: 216 GVRQLLDAKENNNEDIIP--LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
+L E ED+ L+ G G RS P+F++ GH +S D+A+ V
Sbjct: 135 ---RLCGRFEPLAEDVGSQQLLLDKGEQIGWVWRSKARC-NPLFVATGHRVSQDSALHWV 190
Query: 274 KMTCK-YRVPEPIRQAD 289
+ + YR+PEP R AD
Sbjct: 191 QSCMRGYRLPEPTRWAD 207
>gi|153997233|ref|ZP_02022340.1| endonuclease V [Yersinia pestis CA88-4125]
gi|161484889|ref|NP_667835.2| endonuclease V [Yersinia pestis KIM10+]
gi|161511335|ref|NP_994389.2| endonuclease V [Yersinia pestis biovar Microtus str. 91001]
gi|162100156|ref|YP_653513.2| endonuclease V [Yersinia pestis Antiqua]
gi|162139452|ref|YP_646165.2| endonuclease V [Yersinia pestis Nepal516]
gi|167470605|ref|ZP_02335309.1| endonuclease V [Yersinia pestis FV-1]
gi|218930738|ref|YP_002348613.1| endonuclease V [Yersinia pestis CO92]
gi|229837481|ref|ZP_04457643.1| endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
Pestoides A]
gi|229839416|ref|ZP_04459575.1| endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229899978|ref|ZP_04515118.1| endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
biovar Orientalis str. India 195]
gi|229900573|ref|ZP_04515699.1| endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
Nepal516]
gi|384138410|ref|YP_005521112.1| endonuclease V [Yersinia pestis A1122]
gi|384413162|ref|YP_005622524.1| endonuclease V [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|420548911|ref|ZP_15046672.1| endonuclease V [Yersinia pestis PY-01]
gi|420554271|ref|ZP_15051454.1| endonuclease V [Yersinia pestis PY-02]
gi|420559888|ref|ZP_15056330.1| endonuclease V [Yersinia pestis PY-03]
gi|420565270|ref|ZP_15061170.1| endonuclease V [Yersinia pestis PY-04]
gi|420570302|ref|ZP_15065744.1| endonuclease V [Yersinia pestis PY-05]
gi|420575973|ref|ZP_15070873.1| endonuclease V [Yersinia pestis PY-06]
gi|420581275|ref|ZP_15075693.1| endonuclease V [Yersinia pestis PY-07]
gi|420586676|ref|ZP_15080581.1| endonuclease V [Yersinia pestis PY-08]
gi|420591758|ref|ZP_15085152.1| endonuclease V [Yersinia pestis PY-09]
gi|420597136|ref|ZP_15089988.1| endonuclease V [Yersinia pestis PY-10]
gi|420602834|ref|ZP_15095047.1| endonuclease V [Yersinia pestis PY-11]
gi|420608225|ref|ZP_15099939.1| endonuclease V [Yersinia pestis PY-12]
gi|420613628|ref|ZP_15104779.1| endonuclease V [Yersinia pestis PY-13]
gi|420618976|ref|ZP_15109442.1| endonuclease V family protein [Yersinia pestis PY-14]
gi|420624283|ref|ZP_15114224.1| endonuclease V [Yersinia pestis PY-15]
gi|420629268|ref|ZP_15118747.1| endonuclease V [Yersinia pestis PY-16]
gi|420634484|ref|ZP_15123421.1| endonuclease V [Yersinia pestis PY-19]
gi|420639705|ref|ZP_15128123.1| endonuclease V [Yersinia pestis PY-25]
gi|420645150|ref|ZP_15133102.1| endonuclease V [Yersinia pestis PY-29]
gi|420650468|ref|ZP_15137894.1| endonuclease V [Yersinia pestis PY-32]
gi|420656092|ref|ZP_15142957.1| endonuclease V [Yersinia pestis PY-34]
gi|420661537|ref|ZP_15147815.1| endonuclease V [Yersinia pestis PY-36]
gi|420666894|ref|ZP_15152642.1| endonuclease V [Yersinia pestis PY-42]
gi|420671742|ref|ZP_15157064.1| endonuclease V family protein [Yersinia pestis PY-45]
gi|420677087|ref|ZP_15161927.1| endonuclease V [Yersinia pestis PY-46]
gi|420682653|ref|ZP_15166945.1| endonuclease V [Yersinia pestis PY-47]
gi|420688062|ref|ZP_15171758.1| endonuclease V [Yersinia pestis PY-48]
gi|420693318|ref|ZP_15176358.1| endonuclease V [Yersinia pestis PY-52]
gi|420699050|ref|ZP_15181406.1| endonuclease V [Yersinia pestis PY-53]
gi|420704933|ref|ZP_15186056.1| endonuclease V family protein [Yersinia pestis PY-54]
gi|420710208|ref|ZP_15190784.1| endonuclease V [Yersinia pestis PY-55]
gi|420715714|ref|ZP_15195666.1| endonuclease V [Yersinia pestis PY-56]
gi|420721263|ref|ZP_15200407.1| endonuclease V [Yersinia pestis PY-58]
gi|420726692|ref|ZP_15205205.1| endonuclease V [Yersinia pestis PY-59]
gi|420732186|ref|ZP_15210146.1| endonuclease V [Yersinia pestis PY-60]
gi|420737185|ref|ZP_15214662.1| endonuclease V [Yersinia pestis PY-61]
gi|420742667|ref|ZP_15219589.1| endonuclease V [Yersinia pestis PY-63]
gi|420748549|ref|ZP_15224532.1| endonuclease V [Yersinia pestis PY-64]
gi|420753812|ref|ZP_15229264.1| endonuclease V [Yersinia pestis PY-65]
gi|420759790|ref|ZP_15234040.1| endonuclease V [Yersinia pestis PY-66]
gi|420764965|ref|ZP_15238640.1| endonuclease V [Yersinia pestis PY-71]
gi|420770198|ref|ZP_15243323.1| endonuclease V [Yersinia pestis PY-72]
gi|420775179|ref|ZP_15247843.1| endonuclease V [Yersinia pestis PY-76]
gi|420780811|ref|ZP_15252788.1| endonuclease V [Yersinia pestis PY-88]
gi|420786429|ref|ZP_15257694.1| endonuclease V [Yersinia pestis PY-89]
gi|420791456|ref|ZP_15262222.1| endonuclease V family protein [Yersinia pestis PY-90]
gi|420797027|ref|ZP_15267235.1| endonuclease V [Yersinia pestis PY-91]
gi|420802125|ref|ZP_15271813.1| endonuclease V [Yersinia pestis PY-92]
gi|420807461|ref|ZP_15276655.1| endonuclease V [Yersinia pestis PY-93]
gi|420812858|ref|ZP_15281484.1| endonuclease V family protein [Yersinia pestis PY-94]
gi|420818324|ref|ZP_15286445.1| endonuclease V [Yersinia pestis PY-95]
gi|420823675|ref|ZP_15291226.1| endonuclease V [Yersinia pestis PY-96]
gi|420828739|ref|ZP_15295791.1| endonuclease V [Yersinia pestis PY-98]
gi|420834329|ref|ZP_15300837.1| endonuclease V [Yersinia pestis PY-99]
gi|420839271|ref|ZP_15305301.1| endonuclease V [Yersinia pestis PY-100]
gi|420844465|ref|ZP_15310016.1| endonuclease V [Yersinia pestis PY-101]
gi|420850114|ref|ZP_15315089.1| endonuclease V [Yersinia pestis PY-102]
gi|420855852|ref|ZP_15319921.1| endonuclease V [Yersinia pestis PY-103]
gi|420860942|ref|ZP_15324417.1| endonuclease V [Yersinia pestis PY-113]
gi|421765252|ref|ZP_16202038.1| endonuclease V [Yersinia pestis INS]
gi|56404418|sp|Q8ZAQ8.1|NFI_YERPE RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|115349349|emb|CAL22320.1| endonuclease V [Yersinia pestis CO92]
gi|149289341|gb|EDM39420.1| endonuclease V [Yersinia pestis CA88-4125]
gi|229682393|gb|EEO78483.1| endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
Nepal516]
gi|229686963|gb|EEO79039.1| endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
biovar Orientalis str. India 195]
gi|229695782|gb|EEO85829.1| endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704169|gb|EEO91180.1| endonuclease V (deoxyinosine 3'endoduclease) [Yersinia pestis
Pestoides A]
gi|320013666|gb|ADV97237.1| endonuclease V [Yersinia pestis biovar Medievalis str. Harbin 35]
gi|342853539|gb|AEL72092.1| endonuclease V [Yersinia pestis A1122]
gi|391421514|gb|EIQ84199.1| endonuclease V [Yersinia pestis PY-01]
gi|391421678|gb|EIQ84347.1| endonuclease V [Yersinia pestis PY-02]
gi|391421831|gb|EIQ84484.1| endonuclease V [Yersinia pestis PY-03]
gi|391436524|gb|EIQ97470.1| endonuclease V [Yersinia pestis PY-04]
gi|391437733|gb|EIQ98562.1| endonuclease V [Yersinia pestis PY-05]
gi|391441400|gb|EIR01892.1| endonuclease V [Yersinia pestis PY-06]
gi|391453541|gb|EIR12846.1| endonuclease V [Yersinia pestis PY-07]
gi|391453717|gb|EIR13002.1| endonuclease V [Yersinia pestis PY-08]
gi|391455719|gb|EIR14815.1| endonuclease V [Yersinia pestis PY-09]
gi|391469429|gb|EIR27208.1| endonuclease V [Yersinia pestis PY-10]
gi|391470056|gb|EIR27758.1| endonuclease V [Yersinia pestis PY-11]
gi|391471529|gb|EIR29083.1| endonuclease V [Yersinia pestis PY-12]
gi|391485284|gb|EIR41447.1| endonuclease V [Yersinia pestis PY-13]
gi|391486806|gb|EIR42808.1| endonuclease V [Yersinia pestis PY-15]
gi|391486899|gb|EIR42888.1| endonuclease V family protein [Yersinia pestis PY-14]
gi|391501427|gb|EIR55833.1| endonuclease V [Yersinia pestis PY-16]
gi|391501584|gb|EIR55970.1| endonuclease V [Yersinia pestis PY-19]
gi|391506445|gb|EIR60364.1| endonuclease V [Yersinia pestis PY-25]
gi|391517415|gb|EIR70226.1| endonuclease V [Yersinia pestis PY-29]
gi|391518540|gb|EIR71247.1| endonuclease V [Yersinia pestis PY-34]
gi|391519324|gb|EIR71967.1| endonuclease V [Yersinia pestis PY-32]
gi|391531830|gb|EIR83288.1| endonuclease V [Yersinia pestis PY-36]
gi|391534620|gb|EIR85784.1| endonuclease V [Yersinia pestis PY-42]
gi|391536957|gb|EIR87889.1| endonuclease V family protein [Yersinia pestis PY-45]
gi|391550199|gb|EIR99837.1| endonuclease V [Yersinia pestis PY-46]
gi|391550380|gb|EIS00001.1| endonuclease V [Yersinia pestis PY-47]
gi|391550674|gb|EIS00266.1| endonuclease V [Yersinia pestis PY-48]
gi|391564890|gb|EIS13051.1| endonuclease V [Yersinia pestis PY-52]
gi|391566275|gb|EIS14286.1| endonuclease V [Yersinia pestis PY-53]
gi|391569979|gb|EIS17504.1| endonuclease V family protein [Yersinia pestis PY-54]
gi|391579867|gb|EIS25935.1| endonuclease V [Yersinia pestis PY-55]
gi|391581514|gb|EIS27389.1| endonuclease V [Yersinia pestis PY-56]
gi|391591908|gb|EIS36415.1| endonuclease V [Yersinia pestis PY-58]
gi|391595472|gb|EIS39515.1| endonuclease V [Yersinia pestis PY-60]
gi|391596146|gb|EIS40110.1| endonuclease V [Yersinia pestis PY-59]
gi|391609940|gb|EIS52287.1| endonuclease V [Yersinia pestis PY-61]
gi|391610294|gb|EIS52598.1| endonuclease V [Yersinia pestis PY-63]
gi|391611793|gb|EIS53933.1| endonuclease V [Yersinia pestis PY-64]
gi|391623322|gb|EIS64135.1| endonuclease V [Yersinia pestis PY-65]
gi|391626404|gb|EIS66762.1| endonuclease V [Yersinia pestis PY-66]
gi|391633721|gb|EIS73087.1| endonuclease V [Yersinia pestis PY-71]
gi|391635361|gb|EIS74532.1| endonuclease V [Yersinia pestis PY-72]
gi|391645712|gb|EIS83561.1| endonuclease V [Yersinia pestis PY-76]
gi|391648726|gb|EIS86206.1| endonuclease V [Yersinia pestis PY-88]
gi|391653097|gb|EIS90102.1| endonuclease V [Yersinia pestis PY-89]
gi|391658690|gb|EIS95069.1| endonuclease V family protein [Yersinia pestis PY-90]
gi|391666332|gb|EIT01815.1| endonuclease V [Yersinia pestis PY-91]
gi|391675571|gb|EIT10072.1| endonuclease V [Yersinia pestis PY-93]
gi|391675984|gb|EIT10450.1| endonuclease V [Yersinia pestis PY-92]
gi|391676170|gb|EIT10608.1| endonuclease V family protein [Yersinia pestis PY-94]
gi|391689749|gb|EIT22842.1| endonuclease V [Yersinia pestis PY-95]
gi|391691866|gb|EIT24757.1| endonuclease V [Yersinia pestis PY-96]
gi|391693564|gb|EIT26301.1| endonuclease V [Yersinia pestis PY-98]
gi|391707126|gb|EIT38507.1| endonuclease V [Yersinia pestis PY-99]
gi|391710072|gb|EIT41181.1| endonuclease V [Yersinia pestis PY-100]
gi|391710511|gb|EIT41562.1| endonuclease V [Yersinia pestis PY-101]
gi|391722863|gb|EIT52620.1| endonuclease V [Yersinia pestis PY-102]
gi|391723060|gb|EIT52798.1| endonuclease V [Yersinia pestis PY-103]
gi|391726244|gb|EIT55619.1| endonuclease V [Yersinia pestis PY-113]
gi|411173682|gb|EKS43724.1| endonuclease V [Yersinia pestis INS]
Length = 234
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 42/224 (18%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F + I I +L +L +V + + +PY+PG L+FRE P L
Sbjct: 29 VRFIAGADVGFEQHG-EITRAAIAILRYPSLALVEYQVARVATSLPYIPGLLSFREYPAL 87
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-------- 205
L+ +++R P +++VDG G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 88 LAAWAQLQQR-----PDLILVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGDFLP 142
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
LH G V+ L D N+E + G W +R P+FIS GH +S
Sbjct: 143 LHQDVG----AVQPLFD----NDEQL-------GWVWRSKIRCN-----PLFISPGHRVS 182
Query: 266 LDTAVMIV-KMTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
+ +A+ V + YR+PEP R AD + + Q QRW
Sbjct: 183 VGSALAWVQRCMAGYRLPEPTRWADAIASNRPQ-------FQRW 219
>gi|312880941|ref|ZP_07740741.1| Endonuclease V [Aminomonas paucivorans DSM 12260]
gi|310784232|gb|EFQ24630.1| Endonuclease V [Aminomonas paucivorans DSM 12260]
Length = 225
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 113/252 (44%), Gaps = 45/252 (17%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMS 103
PDPA L+ +Q EL R+I ED F P+ L+ +GG+D +
Sbjct: 6 PDPALPRDLSALAALQRELASRVIREDRF----PDP--------------LRLLGGLDCA 47
Query: 104 FSKED-PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKK 162
+ D + VVL + L V + + L PY+PGFL+FRE P LL ++
Sbjct: 48 APRRDGKTFLVAAAVVLRAEDLTPVEQVTATLPAPFPYIPGFLSFRELPALLEAAGRLRH 107
Query: 163 RANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN----LHHVDGLTHSGVR 218
P + +VDG G+ HPR GLA+H G ++ +IGV K+ + G
Sbjct: 108 -----VPDLWLVDGAGIAHPRRLGLAAHFGAALDVPSIGVAKSRLMGTYQEPGWERGSAS 162
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC- 277
L D G G +RS +KP+F+S GH +SL +++ C
Sbjct: 163 PLWD---------------RGEALGWVLRSR-RGVKPLFVSPGHRVSLTGSLLWTLRACG 206
Query: 278 KYRVPEPIRQAD 289
+ R+PEP R AD
Sbjct: 207 RCRLPEPTRLAD 218
>gi|392406591|ref|YP_006443199.1| deoxyinosine 3'endonuclease [Anaerobaculum mobile DSM 13181]
gi|390619727|gb|AFM20874.1| deoxyinosine 3'endonuclease (endonuclease V) [Anaerobaculum mobile
DSM 13181]
Length = 222
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 106/199 (53%), Gaps = 24/199 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ +GGVD+++ + S AC VV D + +++ Y+ + PY+PG L+FRE PV+
Sbjct: 33 VRLVGGVDVAYLGKGASQACAVAVVWDRLSGEVLESVYAQDEVIFPYIPGLLSFRELPVV 92
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ + + + V MVDG G+ HPR G+A+H GVL + +IGV K+
Sbjct: 93 MKACEGLSSNVD-----VWMVDGAGIAHPRRLGIAAHFGVLLDRPSIGVAKS-------- 139
Query: 214 HSGVRQLLDAK---ENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
+L+ + + +PL G G +R+ D +KP++IS GH +SL AV
Sbjct: 140 -----RLIGSHLPVPRSKGSWVPLR-HDGEVVGHVLRTRND-VKPLYISPGHKVSLRQAV 192
Query: 271 MIVKMTC-KYRVPEPIRQA 288
+V C KYR+PEP R A
Sbjct: 193 ELVLACCTKYRLPEPTRMA 211
>gi|448639980|ref|ZP_21677128.1| endonuclease V [Haloarcula sinaiiensis ATCC 33800]
gi|445762507|gb|EMA13728.1| endonuclease V [Haloarcula sinaiiensis ATCC 33800]
Length = 271
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 129/257 (50%), Gaps = 35/257 (13%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
D AA A+ ++ E R T + P+ T ST ++ +I GVD +F
Sbjct: 27 DIAAAARFEDEMDVLPEAITR-------TGDAPDVDQTTLSTSADDRTEPPFIAGVDQAF 79
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
+ A IVVL Q +++ ++ R ++PY+PG L+FRE +L+ ++
Sbjct: 80 VDDK---AVSAIVVL--QNGEVIERVSAVERTEIPYIPGLLSFREGGAILAAFAELETD- 133
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVR 218
P V++VDG+G +H R GLA+HIGV ++ +GV KNL +D G R
Sbjct: 134 ----PDVVLVDGSGRIHFREAGLATHIGVTLDVPAVGVAKNLLCGTPEQSLDERYPEGTR 189
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAVMIV 273
+ A +++ + P G+ G A+++ +P+ + P+ +S GH +S TA IV
Sbjct: 190 IPIPA--DDSVETCP----DGTVIGHALQTRQYDSPNRHINPLIVSPGHRVSASTAADIV 243
Query: 274 KMTCK-YRVPEPIRQAD 289
++T Y++PEP R AD
Sbjct: 244 EVTADGYKLPEPTRLAD 260
>gi|383817197|ref|ZP_09972576.1| endonuclease V [Serratia sp. M24T3]
gi|383293938|gb|EIC82293.1| endonuclease V [Serratia sp. M24T3]
Length = 226
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 26/215 (12%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F ++ I I VL ++++V + + Q+PY+PGFL+FRE P L+
Sbjct: 31 FIAGADIGF-EQGGEITRAAIAVLRYPSMELVEYQIARIPTQIPYIPGFLSFRECPALIE 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ R P +LMVDG G+ HPR G+ASH G++ ++ TIG+ K+ L
Sbjct: 90 AWQMLQHR-----PDLLMVDGQGIAHPRRLGVASHFGLMIDVPTIGIAKSRLCGHFLPLG 144
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
A + +E + G W +R P+FIS G+ IS+ +++ VK
Sbjct: 145 DAVGSTQALWDKDEQL-------GWVWRSKLRCN-----PLFISPGNGISVASSLYWVKQ 192
Query: 276 TCK-YRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
+ YR+PEP R AD + + QRWQ
Sbjct: 193 CSRGYRLPEPTRWADAVASN-------RPAFQRWQ 220
>gi|403056665|ref|YP_006644882.1| endonuclease V [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402803991|gb|AFR01629.1| endonuclease V [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 229
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 27/199 (13%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E S+ I V+ +L+++ + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-SVTRAAIAVMRYPSLELIEYKIARISTTMPYIPGFLSFRECPGLLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLT 213
++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+ + L
Sbjct: 90 AWALLEQK-----PDLLFVDGHGISHPRCLGVASHFGLLVDVPTIGVAKSRLCGRFEPLA 144
Query: 214 HS-GVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
S G +Q LLD E G W R P+F++ GH +S D+A+
Sbjct: 145 ESVGSQQPLLDKGEQ-----------IGWVWRSKARCN-----PLFVATGHRVSQDSALH 188
Query: 272 IVKMTCK-YRVPEPIRQAD 289
V+ + YR+PEP R AD
Sbjct: 189 WVQSCMRGYRLPEPTRWAD 207
>gi|436838549|ref|YP_007323765.1| Deoxyribonuclease V [Fibrella aestuarina BUZ 2]
gi|384069962|emb|CCH03172.1| Deoxyribonuclease V [Fibrella aestuarina BUZ 2]
Length = 229
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 19/193 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+SF+K + ++ G IVVL L TL+ + E ++ YVPG L+FRE P LL
Sbjct: 38 IAGCDISFNKFEETVYAG-IVVLRLDTLETIAEATAITTTSFSYVPGLLSFREIPALLEA 96
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
D + P V++ DG+G+ HPR G+A+H G+ + T+G GK++
Sbjct: 97 WDKLT-----VMPDVVVFDGHGIAHPRRMGIATHAGLFLDRPTLGCGKSV---------- 141
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKM 275
+ D P++ G G A+R T + + P+++S GH I L+T++ ++++
Sbjct: 142 LVGRYDEPAPERGAWSPMLH-RGEVIGAALR-TKNRINPVYVSPGHLIDLETSIDLMLRC 199
Query: 276 TCKYRVPEPIRQA 288
YR+PEP R+A
Sbjct: 200 DGGYRLPEPTRRA 212
>gi|255036846|ref|YP_003087467.1| Deoxyribonuclease V [Dyadobacter fermentans DSM 18053]
gi|254949602|gb|ACT94302.1| Deoxyribonuclease V [Dyadobacter fermentans DSM 18053]
Length = 239
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 113/218 (51%), Gaps = 27/218 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAPV 152
K I G D+S + ++ G +VVL LQ + +SL++ PYVPG+LAFRE P
Sbjct: 38 KTIAGADISLALYSETVYAG-LVVLSYPDLQPI--AFSLVKSSTIFPYVPGYLAFREIPA 94
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+L + + + P ++M DGNG+LH R G+ASH GVL T+G K
Sbjct: 95 ILKAYEQIPVK-----PDLIMFDGNGILHARRMGIASHFGVLTGAVTMGCAKK-KLAGQY 148
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL-DTAVM 271
T G + + ++I G A+R T D +KP+FIS GH ++L D+ +
Sbjct: 149 TEPGTMKGEYTPVTDKGEVI----------GYALR-TKDNVKPVFISPGHQMTLEDSLTL 197
Query: 272 IVKMTCKYRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
+K T K+R+PEP R R+ +Y+ + ++ L + +
Sbjct: 198 ALKCTGKHRLPEPTR----RAHEYVNRFRTGELTEGYH 231
>gi|387890969|ref|YP_006321267.1| endonuclease V [Escherichia blattae DSM 4481]
gi|414595807|ref|ZP_11445417.1| endonuclease V [Escherichia blattae NBRC 105725]
gi|386925802|gb|AFJ48756.1| endonuclease V [Escherichia blattae DSM 4481]
gi|403193222|dbj|GAB83069.1| endonuclease V [Escherichia blattae NBRC 105725]
Length = 223
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+++GG D+ F E I +VVL +L ++ + + +PY+PGFL+FRE P L
Sbjct: 29 RWVGGADVGFEDEG-RITRAALVVLAWPSLALMEYQIARIPTVMPYIPGFLSFRETPALQ 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + ++ P +L+VDG+G HPR G+A H G+L ++ TIGV K
Sbjct: 88 AAWQQLSRK-----PDLLLVDGHGRSHPRRLGVACHFGLLEDVPTIGVAKKRLCGQFQLP 142
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV- 273
S L + ++ + G W R P+FIS GH +SLDTA+ V
Sbjct: 143 SEAPGALAPLTDKDQQL-------GWVWRSKARCN-----PLFISTGHRVSLDTALSWVQ 190
Query: 274 KMTCKYRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 191 RCMAGYRLPEPTRWAD 206
>gi|188532332|ref|YP_001906129.1| endonuclease V [Erwinia tasmaniensis Et1/99]
gi|226730057|sp|B2VG82.1|NFI_ERWT9 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|188027374|emb|CAO95221.1| Endonuclease V (Deoxyinosine 3'endonuclease) [Erwinia tasmaniensis
Et1/99]
Length = 221
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F ++ + +VVL+ +LQ++ + + +PY+PGFL+FRE P L
Sbjct: 29 RFIGGADVGF-EQGGEVTRAALVVLEYPSLQLIEHQVARIATAMPYIPGFLSFREMPALE 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + +R P +L+VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 TAWCQLAQR-----PDLLLVDGHGIAHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
G DA + + PLM G +RS P+FIS GH +S TA+ +
Sbjct: 136 CGQFTPPDAAPGSCQ---PLM-DKDRQLGWVLRSK-ARCNPLFISPGHRVSQATALDWVQ 190
Query: 274 KMTCKYRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 KCLLGYRLPEPTRWAD 206
>gi|384046724|ref|YP_005494741.1| endonuclease V [Bacillus megaterium WSH-002]
gi|345444415|gb|AEN89432.1| Endonuclease V [Bacillus megaterium WSH-002]
Length = 239
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 116/209 (55%), Gaps = 18/209 (8%)
Query: 98 GGVDMSFSKEDPSIACGC-IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
GVD+++ +E+ C IVV+D QT +V + +S+ + VPY+PGFLAFRE P++L
Sbjct: 43 AGVDVAYWEENGISHGACSIVVVDYQTKNVVEKVHSVGEVTVPYLPGFLAFRELPLILET 102
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
++ P V + DGNG LH G+A+H N T+G+GK+ + G H
Sbjct: 103 AKKLQVE-----PDVFLFDGNGYLHYEHMGVATHASFFLNKPTVGIGKSYLKIKG--HDY 155
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA--VMIVK 274
V + + E EDI+ +G +R T +KPIF+S G+ I LD + +M+
Sbjct: 156 V--MPEDTEGAYEDIVI----DDEVYGRVVR-TAKGVKPIFLSCGNYIDLDMSYQLMMHF 208
Query: 275 MTCKYRVPEPIRQADIRSRDYLQKH-QST 302
++ + ++P P+R AD+ + + +++ QST
Sbjct: 209 ISKESKLPIPVRLADLHTHELRKRYRQST 237
>gi|156935799|ref|YP_001439715.1| endonuclease V [Cronobacter sakazakii ATCC BAA-894]
gi|389842615|ref|YP_006344699.1| endonuclease V [Cronobacter sakazakii ES15]
gi|417792402|ref|ZP_12439764.1| endonuclease V [Cronobacter sakazakii E899]
gi|424802031|ref|ZP_18227573.1| Endonuclease V [Cronobacter sakazakii 696]
gi|429112574|ref|ZP_19174344.1| Endonuclease V [Cronobacter malonaticus 507]
gi|429120833|ref|ZP_19181493.1| Endonuclease V [Cronobacter sakazakii 680]
gi|449309910|ref|YP_007442266.1| endonuclease V [Cronobacter sakazakii SP291]
gi|166233959|sp|A7MJ90.1|NFI_ENTS8 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|156534053|gb|ABU78879.1| hypothetical protein ESA_03675 [Cronobacter sakazakii ATCC BAA-894]
gi|333953506|gb|EGL71446.1| endonuclease V [Cronobacter sakazakii E899]
gi|387853091|gb|AFK01189.1| endonuclease V [Cronobacter sakazakii ES15]
gi|423237752|emb|CCK09443.1| Endonuclease V [Cronobacter sakazakii 696]
gi|426313731|emb|CCK00457.1| Endonuclease V [Cronobacter malonaticus 507]
gi|426324695|emb|CCK12230.1| Endonuclease V [Cronobacter sakazakii 680]
gi|449099943|gb|AGE87977.1| endonuclease V [Cronobacter sakazakii SP291]
Length = 223
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 107/197 (54%), Gaps = 25/197 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L +L+++ + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPSLELLEYQVARIPTTMPYIPGFLSFREYPALLTA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 90 WEMLSRK-----PDLLFVDGHGISHPRRLGVASHFGMLVDVPTIGVAK------------ 132
Query: 217 VRQLLDAKENNNED---IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
++L E +++ + PLM G RS P+F+S GH +S+DTA+ V
Sbjct: 133 -KRLCGKFEPLSDEPGAVSPLM-DKGEQLAWVWRSK-ARCNPLFVSTGHRVSIDTALGWV 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ K YR+PEP R AD
Sbjct: 190 QRCTKGYRLPEPTRWAD 206
>gi|359784546|ref|ZP_09287716.1| deoxyribonuclease V [Halomonas sp. GFAJ-1]
gi|359298170|gb|EHK62388.1| deoxyribonuclease V [Halomonas sp. GFAJ-1]
Length = 228
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 112/203 (55%), Gaps = 26/203 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQT-----LQIVYEDYSLLRLQVPYVPGFLAFR 148
+K+I GVD+ F +E+ +I +VVL + L +V + ++PY+PG L+FR
Sbjct: 35 VKHIAGVDIGF-EEEGAITRAAVVVLKWEQSAAPYLTVVEQVVHREPTRMPYIPGLLSFR 93
Query: 149 EAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHH 208
E P L + + R P+++MVDG G+ HPR G+A+H+G+ ++ TIG+ K+ +
Sbjct: 94 EIPAALGAFEKLSVR-----PELVMVDGQGIAHPRRLGVAAHLGLWLDIPTIGIAKSRLY 148
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
H+ V + D +PL GS G +RS +KP+F+S GH +SL+T
Sbjct: 149 GK---HAEVGE-------ARGDWVPLTAGS-HVIGAVLRSR-VKVKPVFVSPGHRLSLET 196
Query: 269 AVMIVKMTC--KYRVPEPIRQAD 289
++ V M C + ++PEP R AD
Sbjct: 197 SLSWV-MCCLGRTKLPEPTRLAD 218
>gi|440289574|ref|YP_007342339.1| deoxyinosine 3'endonuclease (endonuclease V) [Enterobacteriaceae
bacterium strain FGI 57]
gi|440049096|gb|AGB80154.1| deoxyinosine 3'endonuclease (endonuclease V) [Enterobacteriaceae
bacterium strain FGI 57]
Length = 221
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 105/194 (54%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL++
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYQVARIATTMPYIPGFLSFREYPALLAV 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEKLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ LD++ + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 138 TFEPLDSEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTDSALSWVQHC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|283787329|ref|YP_003367194.1| endonuclease V [Citrobacter rodentium ICC168]
gi|282950783|emb|CBG90459.1| endonuclease V [Citrobacter rodentium ICC168]
Length = 223
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 114/232 (49%), Gaps = 36/232 (15%)
Query: 59 QDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVV 118
Q EL +I ED F + P+ I G D+ F ++ + +V+
Sbjct: 10 QLELASSVIREDRFDRDPPD-----------------LIAGADVGF-EQGGEVTRAAMVL 51
Query: 119 LDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNG 178
L +L+++ + + +PY+PGFL+FRE P LL+ + + ++ P +L VDG+G
Sbjct: 52 LKYPSLELIEYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQK-----PDLLFVDGHG 106
Query: 179 LLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGS 238
+ HPR G+ASH G+L ++ TIGV K G + L A+ + PLM
Sbjct: 107 ISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCGKFEPLSAEPGA---LAPLM-DK 155
Query: 239 GSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
G RS P+F++ GH + LD+A+ V+ K YR+PEP R AD
Sbjct: 156 GEQLAWVWRSK-ARCNPLFVATGHRVGLDSALAWVQRCMKGYRLPEPTRWAD 206
>gi|421847863|ref|ZP_16280993.1| endonuclease V [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411770744|gb|EKS54493.1| endonuclease V [Citrobacter freundii ATCC 8090 = MTCC 1658]
Length = 226
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L TL++V + + +PY+PGFL+FRE P L++
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPTLELVEYKVARIATTMPYIPGFLSFRETPALMAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + P +L VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WQLLSHK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L A+ ++PL+ G RS P+FIS GH +SLD+A+ V+
Sbjct: 138 KFEPLAAEPGA---LVPLL-DKGEQLAWVWRSKARC-NPLFISTGHRVSLDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
YR+PEP R AD
Sbjct: 193 MNGYRLPEPTRWAD 206
>gi|55377534|ref|YP_135384.1| endonuclease V [Haloarcula marismortui ATCC 43049]
gi|448659475|ref|ZP_21683330.1| endonuclease V [Haloarcula californiae ATCC 33799]
gi|55230259|gb|AAV45678.1| endonuclease V [Haloarcula marismortui ATCC 43049]
gi|445760416|gb|EMA11679.1| endonuclease V [Haloarcula californiae ATCC 33799]
Length = 271
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 128/257 (49%), Gaps = 35/257 (13%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
D AA A+ ++ E R T + P+ T ST ++ +I GVD +F
Sbjct: 27 DIAAAARFEDEMDVLPEAITR-------TGDAPDVDQTTLSTSADDRTEPPFIAGVDQAF 79
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
+ A IVVL Q +++ ++ R ++PY+PG L+FRE +L+ ++
Sbjct: 80 VDDK---AVSAIVVL--QNGEVIERVSAVERTEIPYIPGLLSFREGGAILAAFAELETD- 133
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVR 218
P V++VDG+G +H R GLA+HIGV ++ +GV KNL +D G R
Sbjct: 134 ----PDVVLVDGSGRIHFREAGLATHIGVTLDVPAVGVAKNLLCGTPEQSLDERYPEGTR 189
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAVMIV 273
+ A +++ + P G+ G A+++ +P+ + P+ +S GH +S TA IV
Sbjct: 190 IPITA--DDSVETCP----DGTVIGHALQTRQYDSPNRHINPLIVSPGHRVSASTAADIV 243
Query: 274 KMTCK-YRVPEPIRQAD 289
+ T Y++PEP R AD
Sbjct: 244 EATADGYKLPEPTRLAD 260
>gi|283836737|ref|ZP_06356478.1| deoxyribonuclease V [Citrobacter youngae ATCC 29220]
gi|291067288|gb|EFE05397.1| deoxyribonuclease V [Citrobacter youngae ATCC 29220]
Length = 226
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V++ TL++V + + +PY+PGFL+FRE P L+S
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLMKYPTLELVEYKVARIATTMPYIPGFLSFRETPALMSA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WQQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L A+ + PL+ G RS P+FIS GH +S+D A+ V+
Sbjct: 138 KFEPLSAEPGA---LAPLL-DKGEQLAWVWRSK-ARCNPLFISTGHRVSMDNALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
YR+PEP R AD
Sbjct: 193 MNGYRLPEPTRWAD 206
>gi|345003360|ref|YP_004806214.1| deoxyribonuclease V [Streptomyces sp. SirexAA-E]
gi|344318986|gb|AEN13674.1| Deoxyribonuclease V [Streptomyces sp. SirexAA-E]
Length = 225
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 127/259 (49%), Gaps = 45/259 (17%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMS 103
P PA +A+ QD L+ R++ ++ T P + ++ GVD++
Sbjct: 5 PMPADEAEARAA---QDALRTRVVRDE--TGPPPGT---------------GHVTGVDVA 44
Query: 104 FSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKR 163
+ +E + VVLD TL +V E + + PY+PG LAFRE P +L+ L+ +
Sbjct: 45 YDEER-DVVVAAAVVLDAATLGVVAESTARGTVSFPYIPGLLAFREIPTVLAALEALP-- 101
Query: 164 ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN---LHHVDGLTHSGVRQL 220
P +++ DG GL HPR FGLASH+GVL L +GV KN H+ G R+
Sbjct: 102 ---VDPGLVVCDGYGLAHPRRFGLASHLGVLTGLPAVGVAKNPFTFHY----EQPGPRR- 153
Query: 221 LDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKY 279
D PL+ G G A+R T D +KP+F+SVGH LD A + + +
Sbjct: 154 --------GDSSPLL-DEGEEVGRALR-TQDGIKPVFVSVGHRTDLDNACAHTLALARDF 203
Query: 280 RVPEPIRQADIRSRDYLQK 298
R PE R+AD R L++
Sbjct: 204 RQPETTRRADALCRSALRE 222
>gi|410088719|ref|ZP_11285406.1| Endonuclease V [Morganella morganii SC01]
gi|409764773|gb|EKN48905.1| Endonuclease V [Morganella morganii SC01]
Length = 247
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+YI GVD+ F + +V+L L++ + + Q+PY+PG L+FRE P L
Sbjct: 30 RYIAGVDIGFEGGG-DVTRAAVVILTWPELEVAEYQTARIPTQLPYIPGLLSFREIPAAL 88
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + + P +++VDG G HPR G+A H+GVL +L IGV K+
Sbjct: 89 AAWEKLTLK-----PDLVLVDGQGRAHPRRLGVAGHLGVLLDLPAIGVAKS-------RL 136
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+E + L+ G G RS + P+FIS GH + +DTA+ VK
Sbjct: 137 CGTFEPL-AEEAGAQS---LLTDKGELLGWVWRSK-NRCNPLFISPGHHMGIDTALTWVK 191
Query: 275 -MTCKYRVPEPIRQAD 289
+T YR+PEP R AD
Sbjct: 192 ALTRGYRLPEPTRWAD 207
>gi|383453513|ref|YP_005367502.1| endonuclease V [Corallococcus coralloides DSM 2259]
gi|380733585|gb|AFE09587.1| endonuclease V [Corallococcus coralloides DSM 2259]
Length = 238
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 27/224 (12%)
Query: 74 WNLPNSTTTNTSTKEEEEVLLK--------YIGGVDMSFSKEDPSIACGCIVVLDLQTLQ 125
WN+ + + E+++L+ + G D+S K + G +VVLD QTLQ
Sbjct: 10 WNVTPTEAVALQKRLREQLILEPPPGLCVTRLAGADISTEKGN-DTGYGGMVVLDAQTLQ 68
Query: 126 IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGF 185
V + L PYVPG L+FRE PVL ++ + + R P VL+ DG G HPR
Sbjct: 69 PVAHAVATATLTFPYVPGLLSFRELPVLAAVWERLTVR-----PDVLVFDGQGTAHPRRV 123
Query: 186 GLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVA 245
G+A H G+L ++ +IG K+L G L + I G G+A
Sbjct: 124 GIACHGGLLFDIPSIGCAKSL-------LVGTPGKLAERRGATSPIT----HKGEVVGMA 172
Query: 246 MRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
+R T + P+++S GH + LDTAV ++K + +YR PE R A
Sbjct: 173 VR-TRTGVSPVYVSPGHRMDLDTAVEWVLKASPRYREPETTRHA 215
>gi|374853432|dbj|BAL56341.1| O6-methylguanine-DNA methyltransferase/endonuclease V [uncultured
candidate division OP1 bacterium]
gi|374857265|dbj|BAL60118.1| O6-methylguanine-DNA methyltransferase/endonuclease V [uncultured
candidate division OP1 bacterium]
Length = 334
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 128/254 (50%), Gaps = 38/254 (14%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + EIQ+E++K++ P+ +T +GGVD+S++ S+
Sbjct: 102 LQKLQEIQNEIRKKM-------RLAPDRADYHT------------VGGVDLSYAG---SL 139
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
V L+L +L+++ ++ PY+P +LAFRE PV+L+LL +K + +
Sbjct: 140 GVAAYVRLELSSLRVLDTQTLAQEVRFPYIPSYLAFRELPVMLALLQKLKDQDA--LADI 197
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
VDG G LH R G+AS +GV+ ++ TIG+ K+L H + D K +I
Sbjct: 198 TFVDGTGTLHHRQAGIASQLGVMLDIPTIGITKSLLHGEPEK--------DLKTVAPGEI 249
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYR--VPEPIRQAD 289
+ G G G A+R T + +P F+S GH + L+TA+ + + K +PEPI+ A
Sbjct: 250 CYIRIG-GERAGAALRPTAHS-EPFFVSPGHRVDLETALELTQCVLKSDSPLPEPIQHAH 307
Query: 290 IRSRDYLQ--KHQS 301
SR Q KHQ+
Sbjct: 308 NASRRAAQALKHQT 321
>gi|62286975|sp|Q5V474.2|NFI_HALMA RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
Length = 251
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 128/257 (49%), Gaps = 35/257 (13%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
D AA A+ ++ E R T + P+ T ST ++ +I GVD +F
Sbjct: 7 DIAAAARFEDEMDVLPEAITR-------TGDAPDVDQTTLSTSADDRTEPPFIAGVDQAF 59
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
+ A IVVL Q +++ ++ R ++PY+PG L+FRE +L+ ++
Sbjct: 60 VDDK---AVSAIVVL--QNGEVIERVSAVERTEIPYIPGLLSFREGGAILAAFAELETD- 113
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVR 218
P V++VDG+G +H R GLA+HIGV ++ +GV KNL +D G R
Sbjct: 114 ----PDVVLVDGSGRIHFREAGLATHIGVTLDVPAVGVAKNLLCGTPEQSLDERYPEGTR 169
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAVMIV 273
+ A +++ + P G+ G A+++ +P+ + P+ +S GH +S TA IV
Sbjct: 170 IPITA--DDSVETCP----DGTVIGHALQTRQYDSPNRHINPLIVSPGHRVSASTAADIV 223
Query: 274 KMTCK-YRVPEPIRQAD 289
+ T Y++PEP R AD
Sbjct: 224 EATADGYKLPEPTRLAD 240
>gi|417626186|ref|ZP_12276471.1| endonuclease V [Escherichia coli STEC_H.1.8]
gi|345370792|gb|EGX02767.1| endonuclease V [Escherichia coli STEC_H.1.8]
Length = 223
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 106/195 (54%), Gaps = 21/195 (10%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMG-GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
+ L ++ + PLM G WG ++ P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLMDKGEQLAWGWRSKA---RCNPLFIATGHRVSVDSALAWVQR 191
Query: 276 TCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 192 CMKGYRLPEPTRWAD 206
>gi|170770134|ref|ZP_02904587.1| endonuclease V [Escherichia albertii TW07627]
gi|170121016|gb|EDS89947.1| endonuclease V [Escherichia albertii TW07627]
Length = 223
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
D + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WDMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FIS GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFISTGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|221311572|ref|ZP_03593419.1| hypothetical protein Bsubs1_19556 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315899|ref|ZP_03597704.1| hypothetical protein BsubsN3_19472 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320812|ref|ZP_03602106.1| hypothetical protein BsubsJ_19425 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221325098|ref|ZP_03606392.1| hypothetical protein BsubsS_19586 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|255767779|ref|NP_391498.2| deoxyribonuclease V [Bacillus subtilis subsp. subtilis str. 168]
gi|402777780|ref|YP_006631724.1| deoxyribonuclease V [Bacillus subtilis QB928]
gi|452912787|ref|ZP_21961415.1| endonuclease V [Bacillus subtilis MB73/2]
gi|254763317|sp|P96724.2|NFI_BACSU RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|225185407|emb|CAB15634.2| putative deoxyribonuclease V [Bacillus subtilis subsp. subtilis
str. 168]
gi|402482959|gb|AFQ59468.1| Putative deoxyribonuclease V [Bacillus subtilis QB928]
gi|407962456|dbj|BAM55696.1| deoxyribonuclease V [Bacillus subtilis BEST7613]
gi|452117815|gb|EME08209.1| endonuclease V [Bacillus subtilis MB73/2]
Length = 238
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 22/210 (10%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C CI+V+D T +++ + +S+ R+ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVC-CIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFV 156
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK- 274
+ A DII G +G A+R+ D +KPIF+S G+ I LD++ I
Sbjct: 157 TPEIEVGAY----TDIII----DGEVYGRALRTRRD-VKPIFLSCGNYIDLDSSYQITMS 207
Query: 275 -MTCKYRVPEPIRQADIRS---RDYLQKHQ 300
+ + R+P P+R AD+ + R + QK+
Sbjct: 208 LINQESRLPIPVRLADLETHVLRTFYQKNH 237
>gi|338997434|ref|ZP_08636132.1| deoxyribonuclease V [Halomonas sp. TD01]
gi|338765692|gb|EGP20626.1| deoxyribonuclease V [Halomonas sp. TD01]
Length = 230
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 107/200 (53%), Gaps = 24/200 (12%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQT-----LQIVYEDYSLLRLQVPYVPGFLAFREA 150
++ GVD+ F + D I +VVL Q L +V + ++PY+PG L+FRE
Sbjct: 37 HVAGVDIGF-EADGEITRAAVVVLKWQPDTTQHLAMVEQVVHREPTRMPYIPGLLSFREI 95
Query: 151 PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
P L + P+++MVDG G+ HPR G+A+H+G+ NL TIG+ K+ +
Sbjct: 96 PAALEAFTKLT-----ITPELVMVDGQGIAHPRRLGVAAHLGLWLNLPTIGIAKS--RLT 148
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G H+ V N D +PL G G +RS + +KP+F+S GH +SL+T++
Sbjct: 149 G-QHAEV-------GNTRGDWVPLTSGK-DVIGAVLRSRAN-VKPVFVSPGHRLSLETSL 198
Query: 271 -MIVKMTCKYRVPEPIRQAD 289
+V+ + ++PEP R AD
Sbjct: 199 DWVVRCLGRTKLPEPTRLAD 218
>gi|448709370|ref|ZP_21701187.1| endonuclease V [Halobiforma nitratireducens JCM 10879]
gi|445792300|gb|EMA42910.1| endonuclease V [Halobiforma nitratireducens JCM 10879]
Length = 278
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 126/226 (55%), Gaps = 26/226 (11%)
Query: 75 NLPNSTTTNTSTKEEEEVL-LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSL 133
L S+T TS+ +++ + + GVD SF +D +++ V+ +Q +++ +++
Sbjct: 57 TLSESSTPATSSDDDQTLENPPIVAGVDQSFLGDDRALSA----VVAMQAGEVIERVHAV 112
Query: 134 LRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGV 193
L++PYVPG LAFRE +L+ L+ + P +L+ DG+G +H R G+A+HIGV
Sbjct: 113 TPLEIPYVPGLLAFREGGPILAALEELS-----IDPDLLLFDGSGRIHFRQAGIATHIGV 167
Query: 194 LANLTTIGVGKNL------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR 247
+ ++ ++GV K+L +GL +G R ++A + + L+G + V R
Sbjct: 168 VRDVPSVGVAKSLLCGEPIADTEGLA-AGERVPIEADSSVDASAGTLLG-----YAVQTR 221
Query: 248 --STPDT-LKPIFISVGHCISLDTAVMIVK-MTCKYRVPEPIRQAD 289
+PD + P+++S GH + +TA +V+ + Y++PEP+R AD
Sbjct: 222 QYDSPDRHINPLYVSPGHRVGPETAAALVQALASTYKLPEPVRLAD 267
>gi|146309878|ref|YP_001174952.1| endonuclease V [Enterobacter sp. 638]
gi|167016289|sp|A4W5C1.1|NFI_ENT38 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|145316754|gb|ABP58901.1| Endonuclease V [Enterobacter sp. 638]
Length = 223
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 QLIAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ + PLM G RS P+F++ GH +S D+A+ V+
Sbjct: 136 CGKFEPLSAEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFVATGHRVSTDSALAWVQ 190
Query: 275 MTCK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 RCMKGYRLPEPTRWAD 206
>gi|407966469|dbj|BAM59708.1| deoxyribonuclease V [Bacillus subtilis BEST7003]
Length = 233
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 22/210 (10%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C CI+V+D T +++ + +S+ R+ VPYV GFLAFRE P+++
Sbjct: 38 AGVDLAYWEQDGEPYGVC-CIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIE 96
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 97 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFV 151
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK- 274
+ A DII G +G A+R+ D +KPIF+S G+ I LD++ I
Sbjct: 152 TPEIEVGAY----TDIII----DGEVYGRALRTRRD-VKPIFLSCGNYIDLDSSYQITMS 202
Query: 275 -MTCKYRVPEPIRQADIRS---RDYLQKHQ 300
+ + R+P P+R AD+ + R + QK+
Sbjct: 203 LINQESRLPIPVRLADLETHVLRTFYQKNH 232
>gi|261344363|ref|ZP_05972007.1| deoxyribonuclease V [Providencia rustigianii DSM 4541]
gi|282567634|gb|EFB73169.1| deoxyribonuclease V [Providencia rustigianii DSM 4541]
Length = 223
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 108/195 (55%), Gaps = 19/195 (9%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++D +I IVVL L+++ + + Q+PY+PG L+FRE P L++
Sbjct: 30 FIGGADVGF-EQDGAITRAVIVVLSWPELKLIEYQIARIPTQLPYIPGLLSFREVPGLMA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+K++ P +++VDG G+ HPR FG+A H G+LA++ TIGV K+ D +
Sbjct: 89 AWSQIKQK-----PDLVLVDGQGIAHPRRFGVACHFGLLADVPTIGVAKSRLCGDNVE-- 141
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
LD + + + + +G W + + P+++S GH +S +++ VK
Sbjct: 142 -----LDPEPESVQML--RLGDEQLGW---VYRSKKRCNPLYVSPGHKVSFISSLAWVKG 191
Query: 276 TCK-YRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 192 CIQGYRLPEPTRMAD 206
>gi|366157613|ref|ZP_09457475.1| endonuclease V [Escherichia sp. TW09308]
gi|432374583|ref|ZP_19617612.1| endonuclease V [Escherichia coli KTE11]
gi|430893216|gb|ELC15552.1| endonuclease V [Escherichia coli KTE11]
Length = 223
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + IV+L TL++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGDVTRAAIVLLKYPTLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH IS+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRISVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|1894750|emb|CAB07450.1| ywqL [Bacillus subtilis subsp. subtilis str. 168]
Length = 238
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 110/210 (52%), Gaps = 22/210 (10%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C CI+V+D T +++ + +S+ R+ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVC-CIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFV 156
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK- 274
+ A DII G +G A+R+ D +KPIF+S G+ I LD++ I
Sbjct: 157 TPEIEVGAY----TDIII----DGEVYGRALRTRRD-VKPIFLSCGNYIDLDSSYQITMS 207
Query: 275 -MTCKYRVPEPIRQADIRS---RDYLQKHQ 300
+ + R+P P+R AD+ + R + QK+
Sbjct: 208 LINQESRLPIPVRLADLETHVLRTFYQKNH 237
>gi|254785914|ref|YP_003073343.1| deoxyribonuclease V [Teredinibacter turnerae T7901]
gi|237685950|gb|ACR13214.1| deoxyribonuclease V [Teredinibacter turnerae T7901]
Length = 223
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 120/239 (50%), Gaps = 26/239 (10%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEV------LLKYIGGVDMSFSKEDPSIACGC 115
++K++ TE++ + N + S + + V L +Y+ GVD++F ++ +I
Sbjct: 1 MEKQVFTENWPS-NFSEAKVVQASMQGQVCVTGRFDGLPEYVAGVDVAF-RDGGAITVAA 58
Query: 116 IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVD 175
I VL V + + PYVPG+L+FRE P +L ++ + PQ++M D
Sbjct: 59 ICVLVYPAGHCVEQVCYSEPTRFPYVPGYLSFRELPAVLVAWKQLRAK-----PQLVMCD 113
Query: 176 GNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLM 235
G G+ HPR FG+ASH+GVL NL TIGV K+ D R + N E I
Sbjct: 114 GQGIAHPRRFGIASHLGVLLNLPTIGVAKSRLIGDATEPGKNRGECNPLTVNEEQI---- 169
Query: 236 GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSR 293
W + R+ +KP+++S GH + + ++ +++ YR+PEP R AD S+
Sbjct: 170 -----GWLLRTRT---NVKPLYVSPGHMVDIPSSRDLVLAAGNGYRLPEPTRLADKLSK 220
>gi|395230625|ref|ZP_10408928.1| endonuclease V [Citrobacter sp. A1]
gi|424733335|ref|ZP_18161896.1| uroporphyrinogen decarboxylase [Citrobacter sp. L17]
gi|394715709|gb|EJF21501.1| endonuclease V [Citrobacter sp. A1]
gi|422892330|gb|EKU32192.1| uroporphyrinogen decarboxylase [Citrobacter sp. L17]
gi|455644049|gb|EMF23163.1| endonuclease V [Citrobacter freundii GTC 09479]
Length = 226
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L TL++V + + +PY+PGFL+FRE P L++
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPTLELVEYKVARIATTMPYIPGFLSFRETPALMAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + P +L VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WQLLSHK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L A+ ++PL+ G RS P+FIS GH +S+D+A+ V+
Sbjct: 138 KFEPLAAEPGA---LVPLL-DKGEQLAWVWRSK-ARCNPLFISTGHRVSMDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
YR+PEP R AD
Sbjct: 193 MNGYRLPEPTRWAD 206
>gi|385786819|ref|YP_005817928.1| endonuclease V [Erwinia sp. Ejp617]
gi|310766091|gb|ADP11041.1| endonuclease V [Erwinia sp. Ejp617]
Length = 221
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F ++ + +VVL+ +LQ++ + + +PY+PGFL+FRE P L
Sbjct: 29 RFIGGADVGF-EQGGEVTRAALVVLEYPSLQLIEHQVARIATAMPYIPGFLSFREIPALE 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + +R P +L+VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWQQLAQR-----PDLLLVDGHGIAHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
G DA + + PLM G +RS P+FIS GH +S TA +
Sbjct: 136 CGQFTPPDADPGSCQ---PLMDKE-QQLGWVLRSK-VRCNPLFISPGHRVSQATARDWVR 190
Query: 274 KMTCKYRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 KCLHGYRLPEPTRWAD 206
>gi|395646376|ref|ZP_10434236.1| Endonuclease V [Methanofollis liminatans DSM 4140]
gi|395443116|gb|EJG07873.1| Endonuclease V [Methanofollis liminatans DSM 4140]
Length = 220
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 106/195 (54%), Gaps = 23/195 (11%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D +++++ ++ G +L +L+ V ++ + PY+PG AFRE P L+
Sbjct: 32 VAGLDAAYARDGRTV-FGAAALLVFPSLEFVEGAWAACEIAFPYIPGLFAFREGPALIEA 90
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L + P +L+VDG+G+ HPR G+ASHIGV+ + +IGV K+L
Sbjct: 91 LGRLAHT-----PDLLIVDGHGIAHPRRCGIASHIGVVTGIPSIGVAKHL---------- 135
Query: 217 VRQLLDAKENNNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
A E +E P+ G G+T G A+R+ + P+++SVGH + L AV +++
Sbjct: 136 --LCGAAAEPGSERGSAAPVTEG-GATIGCAVRTV-TGVHPVYVSVGHRVGLVEAVRLVL 191
Query: 274 KMTCKYRVPEPIRQA 288
++ YR+P PIR A
Sbjct: 192 ALSDGYRLPAPIRAA 206
>gi|357409928|ref|YP_004921664.1| Deoxyribonuclease V [Streptomyces flavogriseus ATCC 33331]
gi|320007297|gb|ADW02147.1| Deoxyribonuclease V [Streptomyces flavogriseus ATCC 33331]
Length = 237
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 105/207 (50%), Gaps = 27/207 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+++ +D + VVLD TL+++ E + R+ PYVPG LAFRE P +LS
Sbjct: 38 VTGVDVAYD-DDRDLVVAAAVVLDAATLEVIAESTAEGRVTFPYVPGLLAFREIPAVLSA 96
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN----LHHVDGL 212
L+ + P +++ DG G HPR FGLASH+GVL L IGV KN + G
Sbjct: 97 LEGLP-----VDPGLVVCDGYGRAHPRRFGLASHLGVLTGLPVIGVAKNPFTFRYEQPGP 151
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM- 271
LLD E G A+R T D KP+F+SVGH +LD A
Sbjct: 152 RRGDFTPLLDEDEE---------------VGRALR-TQDATKPLFVSVGHRTTLDNACAH 195
Query: 272 IVKMTCKYRVPEPIRQADIRSRDYLQK 298
+ + +R PE R+AD R L++
Sbjct: 196 TLALARDFRQPETTRRADALCRSALRE 222
>gi|335433627|ref|ZP_08558446.1| endonuclease V [Halorhabdus tiamatea SARL4B]
gi|334898525|gb|EGM36630.1| endonuclease V [Halorhabdus tiamatea SARL4B]
Length = 269
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 143/290 (49%), Gaps = 41/290 (14%)
Query: 30 MENYCEEEREALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEE 89
ME C E PDP+ + + +Q E+ + ED F ++ P + ++
Sbjct: 1 MEPVCPE-----FVPDPSLSRE--EMESLQREIADVAVFEDAFAFD-PAAIEFDSPVDLG 52
Query: 90 EEVLLKYIG------GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPG 143
++ + G GVD +F +D A +V L Q +IV Y++L ++PY+PG
Sbjct: 53 DDDQHRLTGDGPIVAGVDQAF-LDDGDRALSAVVAL--QDGRIVDRAYAVLDTEIPYIPG 109
Query: 144 FLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVG 203
L+FRE +L+ L N+ P +L+VDG+G +H R GLA+HIGV+ ++ IGV
Sbjct: 110 LLSFREGGAILAALSNLT-----VEPDLLVVDGSGRIHFREAGLATHIGVVVDVPAIGVA 164
Query: 204 KNL------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR-----STPDT 252
KNL + +G R ++A ++ SG+ G A++ S +
Sbjct: 165 KNLLCGTPAEPIPDRMEAGARIPIEADDSVE------TTESGTVIGHAVQTRQYDSGSTS 218
Query: 253 LKPIFISVGHCISLD-TAVMIVKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
+ P+++S GH +S + TA ++ + Y++PEP R AD R+ D ++ S
Sbjct: 219 INPLYVSPGHRVSAETTADIVAQCAGGYKLPEPTRLAD-RAADRQKRAGS 267
>gi|227115022|ref|ZP_03828678.1| endonuclease V [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 229
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 105/199 (52%), Gaps = 27/199 (13%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+I G D+ F +E S+ I V+ +L+++ + + +PY+PGFL+FRE P LL+
Sbjct: 31 FIAGADVGFEQEG-SVTRAAIAVMRYPSLELIEYKIARISTTMPYIPGFLSFRECPGLLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLT 213
++++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K+ + L
Sbjct: 90 AWALLEQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKSRLCGRFEPLA 144
Query: 214 HS-GVRQ-LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
G +Q LLD E G W R P+F++ GH +S D+A+
Sbjct: 145 EGVGSQQPLLDKGEQ-----------IGWVWRSKARCN-----PLFVATGHRVSQDSALH 188
Query: 272 IVKMTCK-YRVPEPIRQAD 289
V+ + YR+PEP R AD
Sbjct: 189 WVQSCMRGYRLPEPTRWAD 207
>gi|269127562|ref|YP_003300932.1| deoxyribonuclease V [Thermomonospora curvata DSM 43183]
gi|268312520|gb|ACY98894.1| Deoxyribonuclease V [Thermomonospora curvata DSM 43183]
Length = 228
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 99/180 (55%), Gaps = 18/180 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TLQ + E + PYVPG AFRE P L+ L + P +L+ DG+GL HP
Sbjct: 65 TLQPLEESVVIGAAAFPYVPGLFAFRELPALVEALKKLT-----VTPDLLVCDGHGLAHP 119
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLA H+GVL L ++GV K H+ G +H V + + ++ D + G
Sbjct: 120 RRFGLACHLGVLTGLPSLGVAKT--HLLG-SHEPVGE----RRGSSAD----LRHEGQVV 168
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
G +R T D ++P+++SVGH I L+ A ++ ++ +YR+PE R+AD SR L++ S
Sbjct: 169 GRVLR-TQDGVRPVYVSVGHRIGLENACRQVLALSPRYRLPETTRRADRLSRRALEQRGS 227
>gi|432682785|ref|ZP_19918134.1| endonuclease V [Escherichia coli KTE143]
gi|431216501|gb|ELF14100.1| endonuclease V [Escherichia coli KTE143]
Length = 223
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F K+ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-KQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|429107141|ref|ZP_19169010.1| Endonuclease V [Cronobacter malonaticus 681]
gi|426293864|emb|CCJ95123.1| Endonuclease V [Cronobacter malonaticus 681]
Length = 223
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 103/198 (52%), Gaps = 27/198 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L +L+++ + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPSLELLEYQVARIPTTMPYIPGFLSFREYPALLTA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLTH 214
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K + L+
Sbjct: 90 WEMLSRK-----PDLLFVDGHGISHPRRLGVASHFGMLVDVPTIGVAKKRLCGKFEPLSD 144
Query: 215 --SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
V L+D E W R P+F+S GH +S+DTA+
Sbjct: 145 EPGAVSPLIDKGEQ-----------LAWVWRSKARCN-----PLFVSTGHRVSIDTALGW 188
Query: 273 VKMTCK-YRVPEPIRQAD 289
V+ K YR+PEP R AD
Sbjct: 189 VQRCTKGYRLPEPTRWAD 206
>gi|224036449|pdb|3GA2|A Chain A, Crystal Structure Of The Endonuclease_v (Bsu36170) From
Bacillus Subtilis, Northeast Structural Genomics
Consortium Target Sr624
Length = 246
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 109/210 (51%), Gaps = 22/210 (10%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C CI+V+D T +++ + +S R+ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVC-CIIVIDADTKEVIEKVHSXGRISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAKKLETE-----PDVFLFDGNGYLHYNHXGVATHAAFFLGKPTIGIAKTYLKIKGCDFV 156
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK- 274
+ A DII G +G A+R+ D +KPIF+S G+ I LD++ I
Sbjct: 157 TPEIEVGAY----TDIII----DGEVYGRALRTRRD-VKPIFLSCGNYIDLDSSYQITXS 207
Query: 275 -MTCKYRVPEPIRQADIRS---RDYLQKHQ 300
+ + R+P P+R AD+ + R + QK+
Sbjct: 208 LINQESRLPIPVRLADLETHVLRTFYQKNH 237
>gi|392373792|ref|YP_003205625.1| endonuclease V [Candidatus Methylomirabilis oxyfera]
gi|258591485|emb|CBE67786.1| Endonuclease V (Deoxyinosine 3'endonuclease) (Deoxyribonuclease V)
(DNase V) [Candidatus Methylomirabilis oxyfera]
Length = 231
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 105/195 (53%), Gaps = 19/195 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D+++ K + G +VV+ +++ + Q PY+PG L+FRE P ++
Sbjct: 38 VAGIDVAYDKHSRLMFAG-VVVMSGDGCELLDCATATANAQFPYIPGLLSFREIPPVIKA 96
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
D +K P+ L+ DG+GL HPR FGLA H+G++ +L +IG K+ + G TH
Sbjct: 97 WDQLKT-----VPECLICDGHGLAHPRRFGLACHLGLVLDLPSIGCAKS--RLVG-THQE 148
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
R + PL+ G G+ +R T D + P+F+S G ISLD A+ V T
Sbjct: 149 PR-------TRRGSVAPLL-DQGEQIGMVLR-TKDGVAPVFVSQGDRISLDAALQTVLAT 199
Query: 277 CK-YRVPEPIRQADI 290
C YR+PEP R+A +
Sbjct: 200 CHGYRLPEPQRRAHL 214
>gi|452975081|gb|EME74900.1| deoxyribonuclease V [Bacillus sonorensis L12]
Length = 241
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 116/217 (53%), Gaps = 28/217 (12%)
Query: 94 LKYIGGVDMSFSKED-PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
L+ GVD+++ +ED S+ +VVLD+ + I+ + +S+ ++ VPYVPGFLAFRE P+
Sbjct: 39 LQNCAGVDLAYWEEDGESVGVCSMVVLDVNSKNIIEKVHSVGKINVPYVPGFLAFRELPL 98
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
++ + P V + DGNG LH G+A+H N TIG+ K
Sbjct: 99 IIEAAKKLTVD-----PDVFLFDGNGYLHYHHMGVATHASFFLNKPTIGIAK-------- 145
Query: 213 THSGVRQ----LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
T+ ++Q + D + DI+ G +G A+R T +KP+F+S G+ I L++
Sbjct: 146 TYLRIKQTDFEMPDDEVGAYTDIVI----DGEVYGRALR-TRQGVKPVFLSSGNFIDLES 200
Query: 269 AVMIVK--MTCKYRVPEPIRQADIRS---RDYLQKHQ 300
+ I + + R+P P+R AD+ + R Y Q+++
Sbjct: 201 SYQIAMNLINQESRLPIPVRLADLETHALRKYYQENK 237
>gi|24115282|ref|NP_709792.1| endonuclease V [Shigella flexneri 2a str. 301]
gi|30064720|ref|NP_838891.1| endonuclease V [Shigella flexneri 2a str. 2457T]
gi|110807848|ref|YP_691368.1| endonuclease V [Shigella flexneri 5 str. 8401]
gi|384545595|ref|YP_005729659.1| Endonuclease V [Shigella flexneri 2002017]
gi|415856951|ref|ZP_11531780.1| endonuclease V [Shigella flexneri 2a str. 2457T]
gi|417704174|ref|ZP_12353276.1| endonuclease V [Shigella flexneri K-218]
gi|417705197|ref|ZP_12354274.1| endonuclease V [Shigella flexneri VA-6]
gi|417724995|ref|ZP_12373788.1| endonuclease V [Shigella flexneri K-304]
gi|417726273|ref|ZP_12375034.1| endonuclease V [Shigella flexneri K-671]
gi|417736633|ref|ZP_12385262.1| endonuclease V [Shigella flexneri 2747-71]
gi|417740426|ref|ZP_12388994.1| endonuclease V [Shigella flexneri 4343-70]
gi|418252407|ref|ZP_12878180.1| endonuclease V [Shigella flexneri 6603-63]
gi|420333230|ref|ZP_14834873.1| endonuclease V [Shigella flexneri K-1770]
gi|420339377|ref|ZP_14840920.1| endonuclease V [Shigella flexneri K-404]
gi|424840220|ref|ZP_18264857.1| endonuclease V [Shigella flexneri 5a str. M90T]
gi|56404408|sp|Q83MJ0.1|NFI_SHIFL RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|122957021|sp|Q0SY02.1|NFI_SHIF8 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|24054576|gb|AAN45499.1| endonuclease V (deoxyinosine 3 endonuclease) [Shigella flexneri 2a
str. 301]
gi|30042980|gb|AAP18702.1| endonuclease V (deoxyinosine 3 endonuclease) [Shigella flexneri 2a
str. 2457T]
gi|110617396|gb|ABF06063.1| endonuclease V [Shigella flexneri 5 str. 8401]
gi|281603382|gb|ADA76366.1| Endonuclease V [Shigella flexneri 2002017]
gi|313648648|gb|EFS13088.1| endonuclease V [Shigella flexneri 2a str. 2457T]
gi|332749195|gb|EGJ79617.1| endonuclease V [Shigella flexneri 2747-71]
gi|332751448|gb|EGJ81850.1| endonuclease V [Shigella flexneri 4343-70]
gi|332765559|gb|EGJ95773.1| endonuclease V [Shigella flexneri K-671]
gi|332998970|gb|EGK18560.1| endonuclease V [Shigella flexneri K-218]
gi|333010731|gb|EGK30159.1| endonuclease V [Shigella flexneri VA-6]
gi|333014346|gb|EGK33699.1| endonuclease V [Shigella flexneri K-304]
gi|383469272|gb|EID64293.1| endonuclease V [Shigella flexneri 5a str. M90T]
gi|391247142|gb|EIQ06396.1| endonuclease V [Shigella flexneri K-1770]
gi|391276098|gb|EIQ34877.1| endonuclease V [Shigella flexneri K-404]
gi|397902417|gb|EJL18736.1| endonuclease V [Shigella flexneri 6603-63]
Length = 223
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L +K + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSKPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|384440202|ref|YP_005654926.1| Endonuclease V [Thermus sp. CCB_US3_UF1]
gi|359291335|gb|AEV16852.1| Endonuclease V [Thermus sp. CCB_US3_UF1]
Length = 226
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 110/203 (54%), Gaps = 23/203 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI---VYEDYSLLRLQVPYVPGFLAFREA 150
++ + +D + + P +A + L+ L + + + +L PY+PGFL+FREA
Sbjct: 35 VRLLAALDAAHKRGKPLVAVAVLYHLEKGPLGLGRGLVPEEALF----PYIPGFLSFREA 90
Query: 151 PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
P L L RA P+VL+VDG G+ HPRG G+ASH+GV +L ++GV K+L +
Sbjct: 91 PAYLEAL-----RALPEAPEVLLVDGQGIAHPRGLGIASHLGVHLDLPSLGVAKSL--LF 143
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G + + Q + L+ G G A RS +KP+++S GH + L+ A+
Sbjct: 144 GRPEAPLPQ-------EAGQAVRLLSPEGRPLGYAYRSR-TGVKPLYVSPGHRVGLEEAL 195
Query: 271 MIV-KMTCKYRVPEPIRQADIRS 292
+V ++ ++R+PEP+R A + +
Sbjct: 196 ALVRRLPTRFRLPEPLRLAHLEA 218
>gi|259906946|ref|YP_002647302.1| endonuclease V [Erwinia pyrifoliae Ep1/96]
gi|387869657|ref|YP_005801027.1| endonuclease V [Erwinia pyrifoliae DSM 12163]
gi|224962568|emb|CAX54023.1| Endonuclease V (Deoxyinosine 3\'endonuclease) [Erwinia pyrifoliae
Ep1/96]
gi|283476740|emb|CAY72575.1| endonuclease V (deoxyinosine 3'endoduclease) [Erwinia pyrifoliae
DSM 12163]
Length = 221
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
++IGG D+ F ++ + +VVL+ +LQ++ + + +PY+PGFL+FRE P L
Sbjct: 29 RFIGGADVGF-EQGGEVTRAALVVLEYPSLQLIEHQVARIATAMPYIPGFLSFREVPALE 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + +R P +L+VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 AAWQQLAQR-----PDLLLVDGHGIAHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
G DA + + PLM G +RS P+FIS GH +S T +
Sbjct: 136 CGQFTPPDADPGSCQ---PLMDKE-QQLGWVLRSK-ARCNPLFISPGHRVSQATVRDWVR 190
Query: 274 KMTCKYRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 191 KCLHGYRLPEPTRWAD 206
>gi|150021438|ref|YP_001306792.1| deoxyribonuclease V [Thermosipho melanesiensis BI429]
gi|166233961|sp|A6LNA6.1|NFI_THEM4 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|149793959|gb|ABR31407.1| Deoxyribonuclease V [Thermosipho melanesiensis BI429]
Length = 226
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 22/193 (11%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+SF K+ IV+LD + ++++ + + ++ PY+PG LAFRE P+ L
Sbjct: 39 VAGVDLSFVKD---YGLAVIVILD-KNMELIKVYHHIEKITFPYIPGLLAFREGPIFLKA 94
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
K+ NH V+ DG+G+ HPR G+ASH+G+ TIG+ K + + +
Sbjct: 95 W----KKVNH-NVDVVFFDGHGISHPRSMGIASHMGLWIEQPTIGIAKKILFGNYVEPEN 149
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK-M 275
+ N+ I G+ +RS + +KPIFIS G+ I+LD ++ + K
Sbjct: 150 KKFSFTYITYKNQKI-----------GIVLRSR-ENVKPIFISPGNLITLDESLELTKQF 197
Query: 276 TCKYRVPEPIRQA 288
KY++PEP R A
Sbjct: 198 ITKYKLPEPTRLA 210
>gi|408828910|ref|ZP_11213800.1| endonuclease V [Streptomyces somaliensis DSM 40738]
Length = 235
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/241 (33%), Positives = 116/241 (48%), Gaps = 36/241 (14%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDP 109
A N+ +QDEL+ R++ ++ V + GVD+++ E
Sbjct: 12 ADENEALAVQDELRARVVLDE-----------------PGPPVGTGLVAGVDVAYDDER- 53
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
+ VVLD +TL +V E ++ R+ PYVPG LAFRE A P
Sbjct: 54 DLVAAAAVVLDARTLDVVDEATAVGRVAFPYVPGLLAFRE-----LPAVLAALDALAAGP 108
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+++ DG G HPR FGLASH+GVL L +GV KN TH +
Sbjct: 109 GLVVCDGYGQAHPRRFGLASHLGVLTGLPVLGVAKNPF---AFTH-------EQPGPRRG 158
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQA 288
D PL+ G+ G A+R T D +KP+F+S GH + LD A + +T +YR+PE R+A
Sbjct: 159 DTAPLLDGA-EEVGRALR-TRDGVKPVFVSAGHRVGLDAACAHTLALTPRYRLPETTRRA 216
Query: 289 D 289
D
Sbjct: 217 D 217
>gi|329937083|ref|ZP_08286712.1| endonuclease V [Streptomyces griseoaurantiacus M045]
gi|329303690|gb|EGG47575.1| endonuclease V [Streptomyces griseoaurantiacus M045]
Length = 217
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TL+ + E ++ + PYVPG LAFRE P +L+ L RA P +++ DG G HP
Sbjct: 54 TLEPLAEATAVGEVAFPYVPGLLAFREIPAVLAAL-----RALPCDPGLVVCDGYGRAHP 108
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLA H+GVL L +GV KN TH + PL+ G
Sbjct: 109 RRFGLACHLGVLTGLPVLGVAKNPFT---FTH-------EPPAAPRGSASPLLAEDGEEV 158
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
G A+R T +KP+F+S GH + LD A + +T +YR+PE R+AD R+ L S
Sbjct: 159 GRALR-TRAGVKPVFVSAGHRVGLDNACAHTLALTPRYRLPETTRRADRLCREALAAATS 217
>gi|432871958|ref|ZP_20091917.1| endonuclease V [Escherichia coli KTE147]
gi|432943792|ref|ZP_20140523.1| endonuclease V [Escherichia coli KTE196]
gi|433045535|ref|ZP_20233002.1| endonuclease V [Escherichia coli KTE117]
gi|431407259|gb|ELG90476.1| endonuclease V [Escherichia coli KTE147]
gi|431466303|gb|ELH46379.1| endonuclease V [Escherichia coli KTE196]
gi|431551584|gb|ELI25569.1| endonuclease V [Escherichia coli KTE117]
Length = 223
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L TL++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPTLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|405372186|ref|ZP_11027450.1| Endonuclease V [Chondromyces apiculatus DSM 436]
gi|397088559|gb|EJJ19540.1| Endonuclease V [Myxococcus sp. (contaminant ex DSM 436)]
Length = 233
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 118/224 (52%), Gaps = 27/224 (12%)
Query: 74 WNLPNSTTTNTSTKEEEEVLLK--------YIGGVDMSFSKEDPSIACGCIVVLDLQTLQ 125
W++ S + E+++L+ I G D+S K G VVLDL +LQ
Sbjct: 10 WDVTPSEAVELQRRLREQLVLRPPPGLKVERIAGADISTEKWK-DTGFGGFVVLDLASLQ 68
Query: 126 IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGF 185
V + + + L+ PYVPG L+FRE P+L + R P V++ DG+G HPR
Sbjct: 69 PVAQSGAAVTLRFPYVPGLLSFRELPILEVAWARLSVR-----PDVVIFDGHGTAHPRRM 123
Query: 186 GLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVA 245
G+A H G+L + +IG GK+L + G TH L +A+ + PLM G G+A
Sbjct: 124 GIACHGGLLLGIPSIGCGKSL--LVG-THG---PLGEARGSTT----PLM-HRGEVVGMA 172
Query: 246 MRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
+R T ++P+++S GH + L TAV +++ ++ K+R PE R A
Sbjct: 173 VR-TRKGVQPVYVSPGHLMDLPTAVELVLAVSPKFREPETTRHA 215
>gi|298675606|ref|YP_003727356.1| deoxyribonuclease V [Methanohalobium evestigatum Z-7303]
gi|298288594|gb|ADI74560.1| Deoxyribonuclease V [Methanohalobium evestigatum Z-7303]
Length = 252
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 124/237 (52%), Gaps = 29/237 (12%)
Query: 79 STTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV 138
S ++ + E++ L+ IGG D +F D I CG IVVL+ T+ ++ + + + ++
Sbjct: 25 SKIASSISYEDDFEPLEIIGGSDCAFV--DDLIICG-IVVLNYNTMDVIEKTHIIQKVTF 81
Query: 139 PYVPGFLAFREAPVLLSLL---DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLA 195
PY+ FL+FRE + S L DN+ P +LM DG G+ HPR G+ASH+G +
Sbjct: 82 PYISTFLSFREGDAIASALFKLDNI--------PDLLMFDGCGINHPRKVGIASHVGAVL 133
Query: 196 NLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKP 255
++ TIGV K + + G T SG + + + PL+ S T G +S T P
Sbjct: 134 DIPTIGVAKKI--LCGNTQSGTPESVGVSK-------PLVYKS-KTIGYLYKSKKGT-NP 182
Query: 256 IFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQADIRSRDY---LQKHQSTCLLQRW 308
I I+ GH +SL++++ IVK K +++PEP R A D LQ + + +W
Sbjct: 183 IIIAPGHRVSLESSLAIVKDCIKNHKLPEPTRLAHNHVNDVKKQLQYRSNNENINKW 239
>gi|291297350|ref|YP_003508748.1| Deoxyribonuclease V [Meiothermus ruber DSM 1279]
gi|290472309|gb|ADD29728.1| Deoxyribonuclease V [Meiothermus ruber DSM 1279]
Length = 250
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 44/225 (19%)
Query: 95 KYIGGVDMS----FSKED-PSIACGCIVVLDLQT---LQIVYEDYSLLRLQVPYVPGFLA 146
+YI +D S FS++ PS+A V+ D QT L++ L PY+PG+L+
Sbjct: 53 RYIAALDASHPTRFSRQKGPSVAVA--VLWDRQTGGVLEVAAAQMDAAEL-FPYIPGYLS 109
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FREAP+ L+ L + + P+VL+VDG G+ HPR G+A+H+GV NL +GV K L
Sbjct: 110 FREAPLYLAALARLSR-----LPEVLLVDGQGIAHPRRLGIAAHLGVHLNLPALGVAKTL 164
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGS-------GSTWGVAMRSTPDTLKPIFIS 259
E ++PL GS G+ G RS ++P+ +S
Sbjct: 165 -----------------LWGRPEGVLPLEAGSAVRLLDGGAQIGWLFRSR-TGVRPLVVS 206
Query: 260 VGHCISLDTAVMIVKMTC-KYRVPEPIRQADIRSRDYLQKHQSTC 303
GH + ++ ++ +V++ K R+PEP+RQA + + LQ+ Q+
Sbjct: 207 PGHRVGMEESLALVRLLMGKTRLPEPLRQAHLHA--GLQRRQANV 249
>gi|374339027|ref|YP_005095763.1| deoxyinosine 3'endonuclease [Marinitoga piezophila KA3]
gi|372100561|gb|AEX84465.1| deoxyinosine 3'endonuclease (endonuclease V) [Marinitoga piezophila
KA3]
Length = 236
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLD--LQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ GVD+SF KE IV++D L++ Y ++ PY+PG LAFRE PV L
Sbjct: 43 VAGVDLSFYKE---FGLAIIVIIDKNFNELEV---KYHYQEIEFPYIPGLLAFRELPVFL 96
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + R P ++ DG+G+ HPR G+A+H + TIG+ K
Sbjct: 97 NAWKKVTIR-----PDIVFFDGHGIAHPRKMGIATHASFFIEIPTIGIAK---------- 141
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA-VMIV 273
S + D NN D + G +R+ T KP+F+S G+ I++D A +
Sbjct: 142 SKLYGNFDEPGNNKGDYSYIYDKKDKKIGCVIRTREKT-KPVFVSPGNFITIDEARYFAL 200
Query: 274 KMTCKYRVPEPIRQADIRSR 293
K + +Y++PEP R A S+
Sbjct: 201 KFSTRYKLPEPTRLAHYYSQ 220
>gi|385266517|ref|ZP_10044604.1| Endonuclease V [Bacillus sp. 5B6]
gi|385151013|gb|EIF14950.1| Endonuclease V [Bacillus sp. 5B6]
Length = 238
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 114/215 (53%), Gaps = 32/215 (14%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVC-TIIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAEKLEAE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKG---- 152
Query: 216 GVRQLLDAKENNNE-----DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
D K NE DI+ G +G A+R+ D +KPIF+S GH I L+++
Sbjct: 153 -----CDFKMPENEVGAYTDILI----DGEVYGRALRTRRD-VKPIFLSCGHDIDLESSY 202
Query: 271 MI-VKMTCK-YRVPEPIRQADIRS---RDYLQKHQ 300
I +KM + R+P P+R AD+ + R + QK+
Sbjct: 203 QITMKMINRESRLPIPVRLADLETHVLRTFYQKNH 237
>gi|398308570|ref|ZP_10512044.1| deoxyribonuclease V [Bacillus mojavensis RO-H-1]
Length = 238
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 110/204 (53%), Gaps = 19/204 (9%)
Query: 94 LKYIGGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
+K GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P
Sbjct: 39 IKTCAGVDLAYWEQDGEPYGVCS-IIVIDTDTKEVIEKVHSMGKISVPYVSGFLAFRELP 97
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
+++ ++ P V + DGNG LH G+A+H N TIG+ K + G
Sbjct: 98 LIIEAAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLNKPTIGIAKTYLKIKG 152
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
+ + K + DII G +G A+R+ D +KPIF+S G+ I L+++
Sbjct: 153 CDFV----MPENKVGSYTDIII----DGEVYGRALRTRRD-VKPIFLSCGNNIDLESSYQ 203
Query: 272 IV--KMTCKYRVPEPIRQADIRSR 293
I ++ + R+P P+R AD+ +
Sbjct: 204 ITMSMISHESRLPIPVRLADLETH 227
>gi|300928817|ref|ZP_07144325.1| deoxyribonuclease V [Escherichia coli MS 187-1]
gi|300463198|gb|EFK26691.1| deoxyribonuclease V [Escherichia coli MS 187-1]
Length = 223
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 105/197 (53%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P L
Sbjct: 28 LDLIAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPAL 86
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ + + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 87 LAAWEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------R 134
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G + L ++ + PLM G RS P+FI+ GH +S+D+A+ V
Sbjct: 135 LCGKFEPLSSEPGA---LAPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSVDSALAWV 189
Query: 274 KMTCK-YRVPEPIRQAD 289
+ K YR+PEP R AD
Sbjct: 190 QRCMKGYRLPEPTRWAD 206
>gi|237727866|ref|ZP_04558347.1| endonuclease V [Citrobacter sp. 30_2]
gi|226910423|gb|EEH96341.1| endonuclease V [Citrobacter sp. 30_2]
Length = 226
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L TL++V + + +PY+PGFL+FRE P L++
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPTLELVEYKVARIATTMPYIPGFLSFRETPALMAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + P +L VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WQLLSHK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L A+ + PL+ G RS P+FIS GH +S+D+A+ V+
Sbjct: 138 KFEPLAAEPGA---LAPLL-DKGEQLAWVWRSK-ARCNPLFISTGHRVSMDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
YR+PEP R AD
Sbjct: 193 MNGYRLPEPTRWAD 206
>gi|298492125|ref|YP_003722302.1| deoxyribonuclease V ['Nostoc azollae' 0708]
gi|298234043|gb|ADI65179.1| Deoxyribonuclease V ['Nostoc azollae' 0708]
Length = 219
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 105/202 (51%), Gaps = 21/202 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ GVD+ F + ++ + VL LQIV + PY+PGFL+FRE P +
Sbjct: 37 IQHVAGVDVGFYHK---MSRAAVAVLSFPDLQIVETSLAYRPTSFPYIPGFLSFREIPAI 93
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L+ +K P +++ DG G H R G+A H+GVL ++ IGV K+L
Sbjct: 94 LDALEKIKT-----IPDIILCDGQGTAHRRRLGIACHLGVLIDIPIIGVAKSL------- 141
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G + L + + + +I T G +R T +KP++IS GH ISL TA+ +
Sbjct: 142 LIGKHEELPEAKGSWQPLI----HQNETVGAVLR-TRSGVKPLYISSGHRISLPTAIDYV 196
Query: 273 VKMTCKYRVPEPIRQADIRSRD 294
+ T KYR+PE R AD + D
Sbjct: 197 LCCTPKYRLPETTRIADKLASD 218
>gi|110667203|ref|YP_657014.1| endonuclease V (deoxyinosine 3'endonuclease) [Haloquadratum walsbyi
DSM 16790]
gi|109624950|emb|CAJ51363.1| endonuclease V [Haloquadratum walsbyi DSM 16790]
Length = 281
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 18/229 (7%)
Query: 68 TEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIV 127
T+D + +ST+T ++ + + GVD +F E + ++ + +V
Sbjct: 51 TKDTTQKTIDSSTSTTDIPNQDADETQPLVAGVDQAFRTEQSEVISAIVLT---RGATVV 107
Query: 128 YEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGL 187
++ L +PY+PG L+FRE +L+ + + ++ P + M DG+G +H R GL
Sbjct: 108 DRIVAVTDLSIPYIPGLLSFREGGPILAAFEEISQK-----PDITMFDGSGRMHYRQAGL 162
Query: 188 ASHIGVLANLTTIGVGKNL-----HHVDGLTHSGVRQLLDAKEN-NNEDIIPLMGGSGST 241
A+HIGV+ ++ TIGV K+L +G + ++A E + D ++G + T
Sbjct: 163 ATHIGVVLDIPTIGVAKSLLCGTPESDTAQRPTGWQTQINADETVEDADTETVIGHALQT 222
Query: 242 WGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
R + P+++S GH +S TAV I + C Y++PEP R+AD
Sbjct: 223 RQYDSRK---IINPVYVSPGHRVSATTAVKITQALCDGYKLPEPTRRAD 268
>gi|116754579|ref|YP_843697.1| deoxyribonuclease V [Methanosaeta thermophila PT]
gi|121693433|sp|A0B8N3.1|NFI_METTP RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|116666030|gb|ABK15057.1| Deoxyribonuclease V [Methanosaeta thermophila PT]
Length = 223
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 106/202 (52%), Gaps = 26/202 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + G D+SFS S A V+LD ++++ ++ + + PY+PG L FRE PV+
Sbjct: 37 VETVAGADVSFSG---SRAHAAAVLLDYHDMRLLDVSFAEMDVVYPYIPGLLTFREGPVI 93
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L+ + + VL+ DG G+ HPR FG ASH+G+L + +IG K+
Sbjct: 94 LRALEGIDE------ADVLLFDGQGIAHPRRFGEASHLGLLLDRPSIGCAKS-------- 139
Query: 214 HSGVRQLLDAKENNNE-DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
R + +E + E L+ G G A+R T ++P+F+S GH L +A+ I
Sbjct: 140 ----RLWGEFREPDGERGSFSLLVDRGEVVGAALR-TRTNVRPVFVSPGHMSDLSSAIEI 194
Query: 273 VKMTCK--YRVPEPIRQADIRS 292
+ C YRVPEP+R A I S
Sbjct: 195 A-LNCARGYRVPEPLRLAHILS 215
>gi|403253200|ref|ZP_10919503.1| endonuclease V [Thermotoga sp. EMP]
gi|402811464|gb|EJX25950.1| endonuclease V [Thermotoga sp. EMP]
Length = 225
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 115/232 (49%), Gaps = 40/232 (17%)
Query: 74 WNLPNSTTTNTSTKEEEEVLL-------KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI 126
W+LP + +++ L +Y+ GVD+SF ++ +A IVVL+ + +I
Sbjct: 9 WDLPPEEAIKVQNELRKKIKLVPYEGDPEYVAGVDLSFPGKEEGLAV--IVVLEYPSFRI 66
Query: 127 VYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFG 186
V + PY+PG LAFRE P+ L + ++ + P V++ DG GL HPR G
Sbjct: 67 VEIVSERGEITFPYIPGLLAFREGPLFLKAWEKLRTK-----PDVVVFDGQGLAHPRKLG 121
Query: 187 LASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE------NNNEDIIPLMGGSGS 240
+ASH+G+ + TIGV K+ + G ++ + K ++E+II
Sbjct: 122 IASHMGLFIEIPTIGVAKSRLY-------GTFKMPEDKRCSWSYLYDDEEII-------- 166
Query: 241 TWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQADI 290
G +R T + PIF+S GH + ++++ ++K R+PEP R A I
Sbjct: 167 --GCVIR-TKEGSAPIFVSPGHLMDVESSKRLIKAFTLPGRRIPEPTRLAHI 215
>gi|161986396|ref|YP_312911.2| endonuclease V [Shigella sonnei Ss046]
Length = 223
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I GVD+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGVDVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|387609790|ref|YP_006098646.1| endonuclease V [Escherichia coli 042]
gi|284924090|emb|CBG37189.1| endonuclease V [Escherichia coli 042]
Length = 223
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L+ +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLNYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|88811199|ref|ZP_01126455.1| endonuclease V [Nitrococcus mobilis Nb-231]
gi|88791738|gb|EAR22849.1| endonuclease V [Nitrococcus mobilis Nb-231]
Length = 231
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 23/199 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD F +A +VVL L + +L PY+PG L+FRE PV+
Sbjct: 38 VRCVAGVDTGFVDHG-RMARAAVVVLSFPELVPLETRIALEPTPFPYIPGLLSFRELPVV 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L+ + P +++ DG G+ HPR G+A+H+GV+ L TIGVGK+
Sbjct: 97 LHALEKLS-----ILPDLVLCDGQGIAHPRRLGIAAHLGVVTGLPTIGVGKS-------- 143
Query: 214 HSGVRQLLDAKENNNED--IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV- 270
R + D +E E + PLM G +R T ++P+FIS GH +AV
Sbjct: 144 ----RLIGDYREPGMEKGCVAPLMDAK-QRIGTVVR-TRRAVRPLFISPGHRTDHVSAVE 197
Query: 271 MIVKMTCKYRVPEPIRQAD 289
+ T +YR+PEPIR AD
Sbjct: 198 WTLACTGRYRLPEPIRMAD 216
>gi|73857969|gb|AAZ90676.1| endonuclease V [Shigella sonnei Ss046]
Length = 225
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 105/194 (54%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I GVD+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 33 IAGVDVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 91
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 92 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RLCG 139
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 140 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 194
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 195 MKGYRLPEPTRWAD 208
>gi|429191999|ref|YP_007177677.1| deoxyinosine 3'endonuclease [Natronobacterium gregoryi SP2]
gi|448324758|ref|ZP_21514170.1| endonuclease V [Natronobacterium gregoryi SP2]
gi|429136217|gb|AFZ73228.1| deoxyinosine 3'endonuclease (endonuclease V) [Natronobacterium
gregoryi SP2]
gi|445617721|gb|ELY71314.1| endonuclease V [Natronobacterium gregoryi SP2]
Length = 257
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 138/260 (53%), Gaps = 32/260 (12%)
Query: 44 PDPAAQAQL--NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVD 101
PD A +A L ++ +Q E+ + ED ++ P + TT + + GVD
Sbjct: 5 PDLAPEAGLSRDEMEPLQREIADAAVFEDDVRFD-PAAITTPLEAAASADDSAPIVAGVD 63
Query: 102 MSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMK 161
SF +D +++ V+ Q +++ +++ L++PY+PG LAFRE +L+ L +
Sbjct: 64 QSFLDDDRALSA----VVATQAGEVIERAHAVTPLEIPYIPGLLAFREGGPILAALAELS 119
Query: 162 KRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHS 215
P +L+ DG+G +H R G+A+H+GV+ ++ ++GV K+L + L +
Sbjct: 120 -----VDPDLLLFDGSGRIHFRQAGIATHVGVVRDVPSVGVAKSLLCGEPTESTENLP-A 173
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAV 270
G R ++A N+ D G+ G A+++ +P+ + P+++S GH + +TA
Sbjct: 174 GTRVSIEA--NSRVD-----APDGTLLGYAVQTRQYDSPNRHINPLYVSPGHRVGPETAA 226
Query: 271 MIVK-MTCKYRVPEPIRQAD 289
+V+ ++ +Y++PEP+R AD
Sbjct: 227 DVVQALSSQYKLPEPVRLAD 246
>gi|416900671|ref|ZP_11929859.1| endonuclease V [Escherichia coli STEC_7v]
gi|417116773|ref|ZP_11967634.1| deoxyribonuclease V [Escherichia coli 1.2741]
gi|422803658|ref|ZP_16852142.1| endonuclease V [Escherichia coli M863]
gi|422808310|ref|ZP_16856734.1| endonuclease V [Escherichia fergusonii B253]
gi|323963783|gb|EGB59282.1| endonuclease V [Escherichia coli M863]
gi|324110910|gb|EGC04902.1| endonuclease V [Escherichia fergusonii B253]
gi|327250469|gb|EGE62179.1| endonuclease V [Escherichia coli STEC_7v]
gi|386139317|gb|EIG80472.1| deoxyribonuclease V [Escherichia coli 1.2741]
Length = 223
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGDVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSMDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|416790414|ref|ZP_11881171.1| endonuclease V [Escherichia coli O157:H- str. 493-89]
gi|416802234|ref|ZP_11886060.1| endonuclease V [Escherichia coli O157:H- str. H 2687]
gi|419078226|ref|ZP_13623718.1| endonuclease V [Escherichia coli DEC3F]
gi|420283286|ref|ZP_14785513.1| endonuclease V [Escherichia coli TW06591]
gi|422769365|ref|ZP_16823084.1| endonuclease V [Escherichia coli E1520]
gi|425270014|ref|ZP_18661620.1| endonuclease V [Escherichia coli 5412]
gi|209751698|gb|ACI74156.1| endonuclease V [Escherichia coli]
gi|320644483|gb|EFX13546.1| endonuclease V [Escherichia coli O157:H- str. 493-89]
gi|320649802|gb|EFX18323.1| endonuclease V [Escherichia coli O157:H- str. H 2687]
gi|323933960|gb|EGB30434.1| endonuclease V [Escherichia coli E1520]
gi|377916457|gb|EHU80540.1| endonuclease V [Escherichia coli DEC3F]
gi|390778952|gb|EIO46702.1| endonuclease V [Escherichia coli TW06591]
gi|408179965|gb|EKI06611.1| endonuclease V [Escherichia coli 5412]
Length = 223
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|424818250|ref|ZP_18243401.1| endonuclease V [Escherichia fergusonii ECD227]
gi|325499270|gb|EGC97129.1| endonuclease V [Escherichia fergusonii ECD227]
Length = 225
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 33 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 91
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 92 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 139
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 140 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSMDSALAWVQRC 194
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 195 MKGYRLPEPTRWAD 208
>gi|448738541|ref|ZP_21720564.1| endonuclease V [Halococcus thailandensis JCM 13552]
gi|445801425|gb|EMA51759.1| endonuclease V [Halococcus thailandensis JCM 13552]
Length = 263
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 128/256 (50%), Gaps = 33/256 (12%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
P A + + +Q + I D F ++ + NT T + + + G+D +F
Sbjct: 10 PDASSSREEMEALQRTVADEAIFADEFPFDPATVSMANTLTATTGDSPI--VVGIDQAFL 67
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
E A G +V L + +++ + + + PY+PG L+FREA +++ L N+ +
Sbjct: 68 DER---AVGAVVAL--RDGEVIERASAAVDCEFPYIPGLLSFREAGAIVAALGNLDTQ-- 120
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVRQ 219
P + + DG+G +H R GLA+H+GV+ +L +IGV K+L +DG + G R
Sbjct: 121 ---PDLAVFDGSGRIHYREAGLATHLGVVFDLPSIGVAKSLLCGSPQGSLDGRSE-GARV 176
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMR-----STPDTLKPIFISVGHCISLDTAVMIVK 274
+DA E+ + G+ T G A++ S + P+++S GH + +TA +V+
Sbjct: 177 AIDADED--------VEGADGTIGYALQTRQYDSGNRHINPVYVSPGHRVGPETAADLVE 228
Query: 275 MTCK-YRVPEPIRQAD 289
C Y++PEP R AD
Sbjct: 229 QLCDGYKLPEPTRLAD 244
>gi|420376199|ref|ZP_14875982.1| endonuclease V [Shigella flexneri 1235-66]
gi|391306363|gb|EIQ64120.1| endonuclease V [Shigella flexneri 1235-66]
Length = 226
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 98/198 (49%), Gaps = 27/198 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L TL++V + + +PY+PGFL+FRE P L++
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPTLELVEYKVARIATTMPYIPGFLSFRETPALMAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLTH 214
+ + P +L VDG+G+ HPR G+ASH G+L ++ TIGV K D L
Sbjct: 90 WQQLSHK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFDPLAA 144
Query: 215 --SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+ LLD E W R P+FIS GH +SLD ++
Sbjct: 145 EPGALAPLLDKGEQ-----------LAWVWRSKARCN-----PLFISTGHRVSLDRSLAW 188
Query: 273 VKMTCK-YRVPEPIRQAD 289
V+ YR+PEP R AD
Sbjct: 189 VQRCMNGYRLPEPTRWAD 206
>gi|108758366|ref|YP_629755.1| endonuclease V [Myxococcus xanthus DK 1622]
gi|122389876|sp|Q1DC68.1|NFI_MYXXD RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|108462246|gb|ABF87431.1| endonuclease V [Myxococcus xanthus DK 1622]
Length = 235
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 117/224 (52%), Gaps = 27/224 (12%)
Query: 74 WNLPNSTTTNTSTKEEEEVLLK--------YIGGVDMSFSKEDPSIACGCIVVLDLQTLQ 125
W++ S + E+++L+ I G D+S K G VVLD++TL
Sbjct: 12 WDVTPSEAVELQRRLREQLVLRPPPGLKVERIAGADISTEKGK-DTGFGGFVVLDVETLA 70
Query: 126 IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGF 185
V + +++ L PYVPG L+FRE P + + + + R P V++ DG G HPR
Sbjct: 71 PVAQSEAVVTLHFPYVPGLLSFRELPTIAAAWERLTVR-----PDVVIFDGQGTAHPRRM 125
Query: 186 GLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVA 245
G+A H G+L + +IG K+L + G TH L +A+ + PLM G G+A
Sbjct: 126 GIACHGGLLFGVPSIGCAKSL--LVG-THG---PLGEARGSTA----PLM-HRGEVVGMA 174
Query: 246 MRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
+R T ++P+++S GH + L TAV ++K++ KYR PE R A
Sbjct: 175 VR-TRKGVQPVYVSPGHLMDLPTAVEWVLKVSPKYREPETTRHA 217
>gi|331655698|ref|ZP_08356688.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli M718]
gi|422836707|ref|ZP_16884746.1| endonuclease V [Escherichia coli E101]
gi|331046623|gb|EGI18710.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli M718]
gi|371607562|gb|EHN96132.1| endonuclease V [Escherichia coli E101]
Length = 223
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 IKGYRLPEPTRWAD 206
>gi|85058117|ref|YP_453819.1| endonuclease V [Sodalis glossinidius str. 'morsitans']
gi|123520304|sp|Q2NWR1.1|NFI_SODGM RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|84778637|dbj|BAE73414.1| endonuclease V (deoxyinosine 3'endoduclease) [Sodalis glossinidius
str. 'morsitans']
Length = 231
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + I +L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAIALLRFPSLELVEFQVARVTTTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
D + R P +L+VDG+G+ HPR G+ASH G+L + TIGV K +
Sbjct: 90 WDKLGHR-----PDLLLVDGHGISHPRRLGVASHFGLLVDTPTIGVAKRRLCGKFAPLAE 144
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L + E + W +R P+FIS GH + L +A+ V++
Sbjct: 145 AQGALAPLMDKGEQL-------AWVWRSKLRCN-----PLFISTGHRVGLASALHWVQLC 192
Query: 277 CK-YRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
+ YR+PEP R AD + + +RWQ
Sbjct: 193 MRGYRLPEPTRWADAVA-------SNRTAFKRWQ 219
>gi|15804589|ref|NP_290630.1| endonuclease V [Escherichia coli O157:H7 str. EDL933]
gi|15834175|ref|NP_312948.1| endonuclease V [Escherichia coli O157:H7 str. Sakai]
gi|26250769|ref|NP_756809.1| endonuclease V [Escherichia coli CFT073]
gi|90111673|ref|NP_418426.2| endonuclease V [Escherichia coli str. K-12 substr. MG1655]
gi|91212795|ref|YP_542781.1| endonuclease V [Escherichia coli UTI89]
gi|110644333|ref|YP_672063.1| endonuclease V [Escherichia coli 536]
gi|117626260|ref|YP_859583.1| endonuclease V [Escherichia coli APEC O1]
gi|168752037|ref|ZP_02777059.1| endonuclease V [Escherichia coli O157:H7 str. EC4113]
gi|168758606|ref|ZP_02783613.1| endonuclease V [Escherichia coli O157:H7 str. EC4401]
gi|168764578|ref|ZP_02789585.1| endonuclease V [Escherichia coli O157:H7 str. EC4501]
gi|168771470|ref|ZP_02796477.1| endonuclease V [Escherichia coli O157:H7 str. EC4486]
gi|168777389|ref|ZP_02802396.1| endonuclease V [Escherichia coli O157:H7 str. EC4196]
gi|168780383|ref|ZP_02805390.1| endonuclease V [Escherichia coli O157:H7 str. EC4076]
gi|168790358|ref|ZP_02815365.1| endonuclease V [Escherichia coli O157:H7 str. EC869]
gi|168798368|ref|ZP_02823375.1| endonuclease V [Escherichia coli O157:H7 str. EC508]
gi|170021999|ref|YP_001726953.1| endonuclease V [Escherichia coli ATCC 8739]
gi|170083459|ref|YP_001732779.1| endonuclease V [Escherichia coli str. K-12 substr. DH10B]
gi|170681451|ref|YP_001746382.1| endonuclease V [Escherichia coli SMS-3-5]
gi|188496263|ref|ZP_03003533.1| endonuclease V [Escherichia coli 53638]
gi|191168650|ref|ZP_03030431.1| endonuclease V [Escherichia coli B7A]
gi|191174298|ref|ZP_03035806.1| endonuclease V [Escherichia coli F11]
gi|193066404|ref|ZP_03047451.1| endonuclease V [Escherichia coli E22]
gi|193067827|ref|ZP_03048793.1| endonuclease V [Escherichia coli E110019]
gi|194429966|ref|ZP_03062475.1| endonuclease V [Escherichia coli B171]
gi|194439779|ref|ZP_03071846.1| endonuclease V [Escherichia coli 101-1]
gi|195939624|ref|ZP_03085006.1| endonuclease V [Escherichia coli O157:H7 str. EC4024]
gi|208808880|ref|ZP_03251217.1| endonuclease V [Escherichia coli O157:H7 str. EC4206]
gi|208812437|ref|ZP_03253766.1| endonuclease V [Escherichia coli O157:H7 str. EC4045]
gi|208818426|ref|ZP_03258746.1| endonuclease V [Escherichia coli O157:H7 str. EC4042]
gi|209396123|ref|YP_002273514.1| endonuclease V [Escherichia coli O157:H7 str. EC4115]
gi|215489330|ref|YP_002331761.1| endonuclease V [Escherichia coli O127:H6 str. E2348/69]
gi|217325943|ref|ZP_03442027.1| endonuclease V [Escherichia coli O157:H7 str. TW14588]
gi|218551018|ref|YP_002384809.1| endonuclease V [Escherichia fergusonii ATCC 35469]
gi|218556553|ref|YP_002389467.1| endonuclease V [Escherichia coli IAI1]
gi|218561064|ref|YP_002393977.1| endonuclease V [Escherichia coli S88]
gi|218692279|ref|YP_002400491.1| endonuclease V [Escherichia coli ED1a]
gi|218697706|ref|YP_002405373.1| endonuclease V [Escherichia coli 55989]
gi|218702633|ref|YP_002410262.1| endonuclease V [Escherichia coli IAI39]
gi|218707617|ref|YP_002415136.1| endonuclease V [Escherichia coli UMN026]
gi|222158704|ref|YP_002558843.1| endonuclease V [Escherichia coli LF82]
gi|227885472|ref|ZP_04003277.1| deoxyribonuclease V [Escherichia coli 83972]
gi|237702765|ref|ZP_04533246.1| endonuclease V [Escherichia sp. 3_2_53FAA]
gi|238903055|ref|YP_002928851.1| endonuclease V [Escherichia coli BW2952]
gi|251787256|ref|YP_003001560.1| endonuclease V (deoxyinosine 3'-endonuclease) [Escherichia coli
BL21(DE3)]
gi|253775372|ref|YP_003038203.1| endonuclease V [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254163940|ref|YP_003047048.1| endonuclease V [Escherichia coli B str. REL606]
gi|254290690|ref|YP_003056438.1| endonuclease V [Escherichia coli BL21(DE3)]
gi|254795996|ref|YP_003080833.1| endonuclease V [Escherichia coli O157:H7 str. TW14359]
gi|260846798|ref|YP_003224576.1| endonuclease V [Escherichia coli O103:H2 str. 12009]
gi|260858108|ref|YP_003231999.1| endonuclease V [Escherichia coli O26:H11 str. 11368]
gi|260870709|ref|YP_003237111.1| endonuclease V [Escherichia coli O111:H- str. 11128]
gi|261227290|ref|ZP_05941571.1| endonuclease V (deoxyinosine 3'endoduclease) [Escherichia coli
O157:H7 str. FRIK2000]
gi|261257037|ref|ZP_05949570.1| endonuclease V [Escherichia coli O157:H7 str. FRIK966]
gi|291285413|ref|YP_003502231.1| endonuclease V [Escherichia coli O55:H7 str. CB9615]
gi|293407615|ref|ZP_06651533.1| endonuclease V [Escherichia coli FVEC1412]
gi|293413434|ref|ZP_06656094.1| endonuclease V [Escherichia coli B354]
gi|293417500|ref|ZP_06660123.1| endonuclease V [Escherichia coli B185]
gi|293474305|ref|ZP_06664714.1| deoxyribonuclease V [Escherichia coli B088]
gi|297516330|ref|ZP_06934716.1| endonuclease V [Escherichia coli OP50]
gi|298383363|ref|ZP_06992955.1| endonuclease V [Escherichia coli FVEC1302]
gi|300897587|ref|ZP_07115996.1| deoxyribonuclease V [Escherichia coli MS 198-1]
gi|300907552|ref|ZP_07125190.1| deoxyribonuclease V [Escherichia coli MS 84-1]
gi|300919416|ref|ZP_07135920.1| deoxyribonuclease V [Escherichia coli MS 115-1]
gi|300947395|ref|ZP_07161588.1| deoxyribonuclease V [Escherichia coli MS 116-1]
gi|300954771|ref|ZP_07167201.1| deoxyribonuclease V [Escherichia coli MS 175-1]
gi|300979672|ref|ZP_07174644.1| deoxyribonuclease V [Escherichia coli MS 45-1]
gi|300985443|ref|ZP_07177446.1| deoxyribonuclease V [Escherichia coli MS 200-1]
gi|301023368|ref|ZP_07187158.1| deoxyribonuclease V [Escherichia coli MS 196-1]
gi|301047732|ref|ZP_07194791.1| deoxyribonuclease V [Escherichia coli MS 185-1]
gi|301302189|ref|ZP_07208321.1| deoxyribonuclease V [Escherichia coli MS 124-1]
gi|301645746|ref|ZP_07245667.1| deoxyribonuclease V [Escherichia coli MS 146-1]
gi|306812013|ref|ZP_07446221.1| endonuclease V [Escherichia coli NC101]
gi|309797702|ref|ZP_07692088.1| deoxyribonuclease V [Escherichia coli MS 145-7]
gi|312965349|ref|ZP_07779582.1| endonuclease V [Escherichia coli 2362-75]
gi|312974216|ref|ZP_07788386.1| endonuclease V [Escherichia coli 1827-70]
gi|331649851|ref|ZP_08350929.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli M605]
gi|331660558|ref|ZP_08361491.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli TA206]
gi|331665654|ref|ZP_08366550.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli TA143]
gi|331685740|ref|ZP_08386322.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli H299]
gi|386283080|ref|ZP_10060715.1| endonuclease V [Escherichia sp. 4_1_40B]
gi|386597485|ref|YP_006093885.1| Deoxyribonuclease V [Escherichia coli DH1]
gi|386602034|ref|YP_006103540.1| endonuclease V [Escherichia coli IHE3034]
gi|386605901|ref|YP_006112201.1| endonuclease V [Escherichia coli UM146]
gi|386616819|ref|YP_006136485.1| endonuclease V [Escherichia coli UMNK88]
gi|386626911|ref|YP_006146639.1| endonuclease V [Escherichia coli O7:K1 str. CE10]
gi|386631966|ref|YP_006151686.1| endonuclease V [Escherichia coli str. 'clone D i2']
gi|386636886|ref|YP_006156605.1| endonuclease V [Escherichia coli str. 'clone D i14']
gi|386641649|ref|YP_006108447.1| endonuclease V [Escherichia coli ABU 83972]
gi|386707246|ref|YP_006171093.1| Endonuclease V [Escherichia coli P12b]
gi|387509448|ref|YP_006161704.1| endonuclease V [Escherichia coli O55:H7 str. RM12579]
gi|387614678|ref|YP_006117794.1| endonuclease V [Escherichia coli ETEC H10407]
gi|387619311|ref|YP_006122333.1| endonuclease V [Escherichia coli O83:H1 str. NRG 857C]
gi|387623631|ref|YP_006131259.1| endonuclease V [Escherichia coli DH1]
gi|387885220|ref|YP_006315522.1| endonuclease V [Escherichia coli Xuzhou21]
gi|388479270|ref|YP_491462.1| endonuclease V [Escherichia coli str. K-12 substr. W3110]
gi|404377422|ref|ZP_10982554.1| endonuclease V [Escherichia sp. 1_1_43]
gi|407467004|ref|YP_006786554.1| endonuclease V [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407484272|ref|YP_006781422.1| endonuclease V [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484818|ref|YP_006772364.1| endonuclease V [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415775713|ref|ZP_11487397.1| endonuclease V [Escherichia coli 3431]
gi|415785491|ref|ZP_11492991.1| endonuclease V [Escherichia coli EPECa14]
gi|415810156|ref|ZP_11502661.1| endonuclease V [Escherichia coli LT-68]
gi|415822087|ref|ZP_11510838.1| endonuclease V [Escherichia coli OK1180]
gi|415838224|ref|ZP_11520207.1| endonuclease V [Escherichia coli RN587/1]
gi|415867894|ref|ZP_11539657.1| deoxyribonuclease V [Escherichia coli MS 85-1]
gi|416285197|ref|ZP_11647668.1| Endonuclease V [Shigella boydii ATCC 9905]
gi|416308221|ref|ZP_11654962.1| Endonuclease V [Escherichia coli O157:H7 str. 1044]
gi|416319549|ref|ZP_11662101.1| Endonuclease V [Escherichia coli O157:H7 str. EC1212]
gi|416324628|ref|ZP_11665334.1| Endonuclease V [Escherichia coli O157:H7 str. 1125]
gi|416334284|ref|ZP_11671240.1| Endonuclease V [Escherichia coli WV_060327]
gi|416779192|ref|ZP_11876282.1| endonuclease V [Escherichia coli O157:H7 str. G5101]
gi|416813073|ref|ZP_11890999.1| endonuclease V [Escherichia coli O55:H7 str. 3256-97]
gi|416823556|ref|ZP_11895601.1| endonuclease V [Escherichia coli O55:H7 str. USDA 5905]
gi|416833818|ref|ZP_11900595.1| endonuclease V [Escherichia coli O157:H7 str. LSU-61]
gi|417088063|ref|ZP_11954834.1| endonuclease V [Escherichia coli cloneA_i1]
gi|417133503|ref|ZP_11978288.1| deoxyribonuclease V [Escherichia coli 5.0588]
gi|417141623|ref|ZP_11984475.1| deoxyribonuclease V [Escherichia coli 97.0259]
gi|417149246|ref|ZP_11989337.1| deoxyribonuclease V [Escherichia coli 1.2264]
gi|417157055|ref|ZP_11994679.1| deoxyribonuclease V [Escherichia coli 96.0497]
gi|417161169|ref|ZP_11997502.1| deoxyribonuclease V [Escherichia coli 99.0741]
gi|417187208|ref|ZP_12012065.1| deoxyribonuclease V [Escherichia coli 93.0624]
gi|417202261|ref|ZP_12018511.1| deoxyribonuclease V [Escherichia coli 4.0522]
gi|417212538|ref|ZP_12022155.1| deoxyribonuclease V [Escherichia coli JB1-95]
gi|417228713|ref|ZP_12030471.1| deoxyribonuclease V [Escherichia coli 5.0959]
gi|417235429|ref|ZP_12034549.1| deoxyribonuclease V [Escherichia coli 9.0111]
gi|417250136|ref|ZP_12041920.1| deoxyribonuclease V [Escherichia coli 4.0967]
gi|417261015|ref|ZP_12048508.1| deoxyribonuclease V [Escherichia coli 2.3916]
gi|417273554|ref|ZP_12060899.1| deoxyribonuclease V [Escherichia coli 2.4168]
gi|417279390|ref|ZP_12066699.1| deoxyribonuclease V [Escherichia coli 3.2303]
gi|417282628|ref|ZP_12069928.1| deoxyribonuclease V [Escherichia coli 3003]
gi|417287849|ref|ZP_12075135.1| deoxyribonuclease V [Escherichia coli TW07793]
gi|417293830|ref|ZP_12081109.1| deoxyribonuclease V [Escherichia coli B41]
gi|417295987|ref|ZP_12083234.1| deoxyribonuclease V [Escherichia coli 900105 (10e)]
gi|417310604|ref|ZP_12097415.1| Endonuclease V [Escherichia coli PCN033]
gi|417583662|ref|ZP_12234457.1| endonuclease V [Escherichia coli STEC_B2F1]
gi|417589190|ref|ZP_12239949.1| endonuclease V [Escherichia coli STEC_C165-02]
gi|417594473|ref|ZP_12245159.1| endonuclease V [Escherichia coli 2534-86]
gi|417610768|ref|ZP_12261254.1| endonuclease V [Escherichia coli STEC_DG131-3]
gi|417615659|ref|ZP_12266105.1| endonuclease V [Escherichia coli STEC_EH250]
gi|417620690|ref|ZP_12271086.1| endonuclease V [Escherichia coli G58-1]
gi|417631486|ref|ZP_12281715.1| endonuclease V [Escherichia coli STEC_MHI813]
gi|417636957|ref|ZP_12287159.1| endonuclease V [Escherichia coli STEC_S1191]
gi|417642019|ref|ZP_12292141.1| endonuclease V [Escherichia coli TX1999]
gi|417664639|ref|ZP_12314218.1| endonuclease 5 [Escherichia coli AA86]
gi|417669599|ref|ZP_12319131.1| endonuclease V [Escherichia coli STEC_O31]
gi|417692469|ref|ZP_12341665.1| endonuclease V [Shigella boydii 5216-82]
gi|417758453|ref|ZP_12406510.1| endonuclease V [Escherichia coli DEC2B]
gi|417807689|ref|ZP_12454615.1| endonuclease V [Escherichia coli O104:H4 str. LB226692]
gi|417835434|ref|ZP_12481873.1| endonuclease V [Escherichia coli O104:H4 str. 01-09591]
gi|417868430|ref|ZP_12513457.1| hypothetical protein C22711_5351 [Escherichia coli O104:H4 str.
C227-11]
gi|417947107|ref|ZP_12590308.1| endonuclease V [Escherichia coli XH140A]
gi|417978669|ref|ZP_12619429.1| endonuclease V [Escherichia coli XH001]
gi|418305622|ref|ZP_12917416.1| endonuclease V [Escherichia coli UMNF18]
gi|418999511|ref|ZP_13547083.1| endonuclease V [Escherichia coli DEC1A]
gi|419004832|ref|ZP_13552336.1| endonuclease V [Escherichia coli DEC1B]
gi|419010517|ref|ZP_13557920.1| endonuclease V [Escherichia coli DEC1C]
gi|419016218|ref|ZP_13563549.1| endonuclease V [Escherichia coli DEC1D]
gi|419021145|ref|ZP_13568438.1| endonuclease V [Escherichia coli DEC1E]
gi|419026598|ref|ZP_13573806.1| endonuclease V [Escherichia coli DEC2A]
gi|419031769|ref|ZP_13578903.1| endonuclease V [Escherichia coli DEC2C]
gi|419037338|ref|ZP_13584405.1| endonuclease V [Escherichia coli DEC2D]
gi|419042450|ref|ZP_13589461.1| endonuclease V [Escherichia coli DEC2E]
gi|419047309|ref|ZP_13594242.1| endonuclease V [Escherichia coli DEC3A]
gi|419048802|ref|ZP_13595722.1| endonuclease V [Escherichia coli DEC3B]
gi|419059923|ref|ZP_13606718.1| endonuclease V [Escherichia coli DEC3C]
gi|419065905|ref|ZP_13612598.1| endonuclease V [Escherichia coli DEC3D]
gi|419072321|ref|ZP_13617915.1| endonuclease V [Escherichia coli DEC3E]
gi|419083361|ref|ZP_13628800.1| endonuclease V [Escherichia coli DEC4A]
gi|419089307|ref|ZP_13634653.1| endonuclease V [Escherichia coli DEC4B]
gi|419095895|ref|ZP_13641163.1| endonuclease V [Escherichia coli DEC4C]
gi|419095996|ref|ZP_13641249.1| endonuclease V [Escherichia coli DEC4D]
gi|419106647|ref|ZP_13651764.1| endonuclease V [Escherichia coli DEC4E]
gi|419107216|ref|ZP_13652327.1| endonuclease V [Escherichia coli DEC4F]
gi|419117576|ref|ZP_13662579.1| endonuclease V [Escherichia coli DEC5A]
gi|419123825|ref|ZP_13668743.1| endonuclease V [Escherichia coli DEC5B]
gi|419128804|ref|ZP_13673668.1| endonuclease V [Escherichia coli DEC5C]
gi|419134137|ref|ZP_13678957.1| endonuclease V [Escherichia coli DEC5D]
gi|419139421|ref|ZP_13684206.1| endonuclease V [Escherichia coli DEC5E]
gi|419145112|ref|ZP_13689835.1| endonuclease V [Escherichia coli DEC6A]
gi|419151016|ref|ZP_13695659.1| endonuclease V [Escherichia coli DEC6B]
gi|419156522|ref|ZP_13701073.1| endonuclease V [Escherichia coli DEC6C]
gi|419161872|ref|ZP_13706359.1| endonuclease V [Escherichia coli DEC6D]
gi|419166966|ref|ZP_13711409.1| endonuclease V [Escherichia coli DEC6E]
gi|419172968|ref|ZP_13716835.1| endonuclease V [Escherichia coli DEC7A]
gi|419183532|ref|ZP_13727128.1| endonuclease V [Escherichia coli DEC7C]
gi|419189146|ref|ZP_13732644.1| endonuclease V [Escherichia coli DEC7D]
gi|419194275|ref|ZP_13737710.1| endonuclease V [Escherichia coli DEC7E]
gi|419199804|ref|ZP_13743087.1| endonuclease V [Escherichia coli DEC8A]
gi|419205360|ref|ZP_13748524.1| endonuclease V [Escherichia coli DEC8B]
gi|419212545|ref|ZP_13755604.1| endonuclease V [Escherichia coli DEC8C]
gi|419218337|ref|ZP_13761323.1| endonuclease V [Escherichia coli DEC8D]
gi|419219000|ref|ZP_13761970.1| endonuclease V [Escherichia coli DEC8E]
gi|419229648|ref|ZP_13772477.1| endonuclease V [Escherichia coli DEC9A]
gi|419246157|ref|ZP_13788783.1| endonuclease V [Escherichia coli DEC9D]
gi|419251981|ref|ZP_13794543.1| endonuclease V [Escherichia coli DEC9E]
gi|419258222|ref|ZP_13800700.1| endonuclease V [Escherichia coli DEC10A]
gi|419258307|ref|ZP_13800782.1| endonuclease V [Escherichia coli DEC10B]
gi|419264351|ref|ZP_13806747.1| endonuclease V [Escherichia coli DEC10C]
gi|419274653|ref|ZP_13816942.1| endonuclease V [Escherichia coli DEC10D]
gi|419286968|ref|ZP_13829123.1| endonuclease V [Escherichia coli DEC10F]
gi|419292225|ref|ZP_13834304.1| endonuclease V [Escherichia coli DEC11A]
gi|419297547|ref|ZP_13839578.1| endonuclease V [Escherichia coli DEC11B]
gi|419303042|ref|ZP_13845029.1| endonuclease V [Escherichia coli DEC11C]
gi|419309084|ref|ZP_13850969.1| endonuclease V [Escherichia coli DEC11D]
gi|419314045|ref|ZP_13855898.1| endonuclease V [Escherichia coli DEC11E]
gi|419319508|ref|ZP_13861299.1| endonuclease V [Escherichia coli DEC12A]
gi|419325772|ref|ZP_13867452.1| endonuclease V [Escherichia coli DEC12B]
gi|419331721|ref|ZP_13873308.1| endonuclease V [Escherichia coli DEC12C]
gi|419337208|ref|ZP_13878713.1| endonuclease V [Escherichia coli DEC12D]
gi|419342599|ref|ZP_13884047.1| endonuclease V [Escherichia coli DEC12E]
gi|419394317|ref|ZP_13935109.1| endonuclease V [Escherichia coli DEC15A]
gi|419399452|ref|ZP_13940207.1| endonuclease V [Escherichia coli DEC15B]
gi|419404693|ref|ZP_13945405.1| endonuclease V [Escherichia coli DEC15C]
gi|419409855|ref|ZP_13950535.1| endonuclease V [Escherichia coli DEC15D]
gi|419415419|ref|ZP_13956046.1| endonuclease V [Escherichia coli DEC15E]
gi|419702862|ref|ZP_14230445.1| endonuclease V [Escherichia coli SCI-07]
gi|419807294|ref|ZP_14332359.1| endonuclease V [Escherichia coli AI27]
gi|419813335|ref|ZP_14338185.1| endonuclease V [Escherichia coli O32:H37 str. P4]
gi|419877920|ref|ZP_14399423.1| endonuclease V [Escherichia coli O111:H11 str. CVM9534]
gi|419883870|ref|ZP_14404913.1| endonuclease V [Escherichia coli O111:H11 str. CVM9545]
gi|419891232|ref|ZP_14411351.1| endonuclease V [Escherichia coli O111:H8 str. CVM9570]
gi|419897085|ref|ZP_14416680.1| endonuclease V [Escherichia coli O111:H8 str. CVM9574]
gi|419903940|ref|ZP_14422952.1| endonuclease V [Escherichia coli O26:H11 str. CVM9942]
gi|419909828|ref|ZP_14428364.1| endonuclease V [Escherichia coli O26:H11 str. CVM10026]
gi|419915857|ref|ZP_14434190.1| endonuclease V [Escherichia coli KD1]
gi|419923283|ref|ZP_14441242.1| endonuclease V [Escherichia coli 541-15]
gi|419931974|ref|ZP_14449344.1| endonuclease V [Escherichia coli 576-1]
gi|419939926|ref|ZP_14456706.1| endonuclease V [Escherichia coli 75]
gi|419943232|ref|ZP_14459793.1| endonuclease V [Escherichia coli HM605]
gi|420090891|ref|ZP_14602652.1| endonuclease V [Escherichia coli O111:H8 str. CVM9602]
gi|420097356|ref|ZP_14608658.1| endonuclease V [Escherichia coli O111:H8 str. CVM9634]
gi|420103942|ref|ZP_14614733.1| endonuclease V [Escherichia coli O111:H11 str. CVM9455]
gi|420110735|ref|ZP_14620668.1| endonuclease V [Escherichia coli O111:H11 str. CVM9553]
gi|420118134|ref|ZP_14627471.1| endonuclease V [Escherichia coli O26:H11 str. CVM10021]
gi|420123131|ref|ZP_14632029.1| endonuclease V [Escherichia coli O26:H11 str. CVM10030]
gi|420128701|ref|ZP_14637251.1| endonuclease V [Escherichia coli O26:H11 str. CVM10224]
gi|420136122|ref|ZP_14644187.1| endonuclease V [Escherichia coli O26:H11 str. CVM9952]
gi|420272499|ref|ZP_14774843.1| endonuclease V [Escherichia coli PA22]
gi|420278146|ref|ZP_14780420.1| endonuclease V [Escherichia coli PA40]
gi|420284054|ref|ZP_14786276.1| endonuclease V [Escherichia coli TW10246]
gi|420294398|ref|ZP_14796511.1| endonuclease V [Escherichia coli TW11039]
gi|420300253|ref|ZP_14802297.1| endonuclease V [Escherichia coli TW09109]
gi|420307063|ref|ZP_14809044.1| endonuclease V [Escherichia coli TW10119]
gi|420312583|ref|ZP_14814503.1| endonuclease V [Escherichia coli EC1738]
gi|420318090|ref|ZP_14819954.1| endonuclease V [Escherichia coli EC1734]
gi|420388366|ref|ZP_14887693.1| endonuclease V [Escherichia coli EPECa12]
gi|420394149|ref|ZP_14893387.1| endonuclease V [Escherichia coli EPEC C342-62]
gi|421778346|ref|ZP_16214923.1| endonuclease V [Escherichia coli AD30]
gi|421815072|ref|ZP_16250766.1| endonuclease V [Escherichia coli 8.0416]
gi|421820849|ref|ZP_16256327.1| endonuclease V [Escherichia coli 10.0821]
gi|421826791|ref|ZP_16262140.1| endonuclease V [Escherichia coli FRIK920]
gi|421832840|ref|ZP_16268121.1| endonuclease V [Escherichia coli PA7]
gi|422335714|ref|ZP_16416708.1| endonuclease V [Escherichia coli 4_1_47FAA]
gi|422357859|ref|ZP_16438522.1| deoxyribonuclease V [Escherichia coli MS 110-3]
gi|422362902|ref|ZP_16443452.1| deoxyribonuclease V [Escherichia coli MS 153-1]
gi|422367508|ref|ZP_16447944.1| deoxyribonuclease V [Escherichia coli MS 16-3]
gi|422373375|ref|ZP_16453687.1| deoxyribonuclease V [Escherichia coli MS 60-1]
gi|422379262|ref|ZP_16459458.1| deoxyribonuclease V [Escherichia coli MS 57-2]
gi|422752527|ref|ZP_16806427.1| endonuclease V [Escherichia coli H252]
gi|422757789|ref|ZP_16811604.1| endonuclease V [Escherichia coli H263]
gi|422764693|ref|ZP_16818438.1| endonuclease V [Escherichia coli E1167]
gi|422773939|ref|ZP_16827619.1| endonuclease V [Escherichia coli E482]
gi|422778780|ref|ZP_16832424.1| endonuclease V [Escherichia coli H120]
gi|422784703|ref|ZP_16837481.1| endonuclease V [Escherichia coli TW10509]
gi|422789412|ref|ZP_16842141.1| endonuclease V [Escherichia coli H489]
gi|422794379|ref|ZP_16847066.1| endonuclease V [Escherichia coli TA007]
gi|422831755|ref|ZP_16879891.1| endonuclease V [Escherichia coli B093]
gi|422842260|ref|ZP_16890224.1| endonuclease V [Escherichia coli H397]
gi|422978783|ref|ZP_16977766.1| endonuclease V [Escherichia coli TA124]
gi|422990261|ref|ZP_16981033.1| endonuclease V [Escherichia coli O104:H4 str. C227-11]
gi|422997158|ref|ZP_16987920.1| endonuclease V [Escherichia coli O104:H4 str. C236-11]
gi|423002254|ref|ZP_16993005.1| endonuclease V [Escherichia coli O104:H4 str. 09-7901]
gi|423005910|ref|ZP_16996655.1| endonuclease V [Escherichia coli O104:H4 str. 04-8351]
gi|423012468|ref|ZP_17003199.1| endonuclease V [Escherichia coli O104:H4 str. 11-3677]
gi|423021702|ref|ZP_17012407.1| endonuclease V [Escherichia coli O104:H4 str. 11-4404]
gi|423026858|ref|ZP_17017552.1| endonuclease V [Escherichia coli O104:H4 str. 11-4522]
gi|423032686|ref|ZP_17023372.1| endonuclease V [Escherichia coli O104:H4 str. 11-4623]
gi|423035561|ref|ZP_17026237.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423040682|ref|ZP_17031350.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423047367|ref|ZP_17038025.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423055905|ref|ZP_17044711.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423057910|ref|ZP_17046708.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423703547|ref|ZP_17677979.1| endonuclease V [Escherichia coli H730]
gi|423728276|ref|ZP_17702023.1| endonuclease V [Escherichia coli PA31]
gi|424080346|ref|ZP_17817280.1| endonuclease V [Escherichia coli FDA505]
gi|424086736|ref|ZP_17823201.1| endonuclease V [Escherichia coli FDA517]
gi|424093155|ref|ZP_17829058.1| endonuclease V [Escherichia coli FRIK1996]
gi|424099842|ref|ZP_17835074.1| endonuclease V [Escherichia coli FRIK1985]
gi|424106039|ref|ZP_17840747.1| endonuclease V [Escherichia coli FRIK1990]
gi|424112675|ref|ZP_17846881.1| endonuclease V [Escherichia coli 93-001]
gi|424118608|ref|ZP_17852422.1| endonuclease V [Escherichia coli PA3]
gi|424124809|ref|ZP_17858085.1| endonuclease V [Escherichia coli PA5]
gi|424130972|ref|ZP_17863854.1| endonuclease V [Escherichia coli PA9]
gi|424137286|ref|ZP_17869701.1| endonuclease V [Escherichia coli PA10]
gi|424143844|ref|ZP_17875674.1| endonuclease V [Escherichia coli PA14]
gi|424150210|ref|ZP_17881565.1| endonuclease V [Escherichia coli PA15]
gi|424165313|ref|ZP_17886986.1| endonuclease V [Escherichia coli PA24]
gi|424258703|ref|ZP_17892526.1| endonuclease V [Escherichia coli PA25]
gi|424336279|ref|ZP_17898464.1| endonuclease V [Escherichia coli PA28]
gi|424452548|ref|ZP_17904169.1| endonuclease V [Escherichia coli PA32]
gi|424458711|ref|ZP_17909786.1| endonuclease V [Escherichia coli PA33]
gi|424465244|ref|ZP_17915536.1| endonuclease V [Escherichia coli PA39]
gi|424471475|ref|ZP_17921252.1| endonuclease V [Escherichia coli PA41]
gi|424477964|ref|ZP_17927259.1| endonuclease V [Escherichia coli PA42]
gi|424483745|ref|ZP_17932705.1| endonuclease V [Escherichia coli TW07945]
gi|424489940|ref|ZP_17938455.1| endonuclease V [Escherichia coli TW09098]
gi|424496655|ref|ZP_17944148.1| endonuclease V [Escherichia coli TW09195]
gi|424503261|ref|ZP_17950124.1| endonuclease V [Escherichia coli EC4203]
gi|424509534|ref|ZP_17955879.1| endonuclease V [Escherichia coli EC4196]
gi|424516938|ref|ZP_17961499.1| endonuclease V [Escherichia coli TW14313]
gi|424523065|ref|ZP_17967149.1| endonuclease V [Escherichia coli TW14301]
gi|424528938|ref|ZP_17972629.1| endonuclease V [Escherichia coli EC4421]
gi|424535081|ref|ZP_17978409.1| endonuclease V [Escherichia coli EC4422]
gi|424541168|ref|ZP_17984092.1| endonuclease V [Escherichia coli EC4013]
gi|424547314|ref|ZP_17989622.1| endonuclease V [Escherichia coli EC4402]
gi|424553511|ref|ZP_17995317.1| endonuclease V [Escherichia coli EC4439]
gi|424559714|ref|ZP_18001087.1| endonuclease V [Escherichia coli EC4436]
gi|424566037|ref|ZP_18007019.1| endonuclease V [Escherichia coli EC4437]
gi|424572164|ref|ZP_18012677.1| endonuclease V [Escherichia coli EC4448]
gi|424578320|ref|ZP_18018332.1| endonuclease V [Escherichia coli EC1845]
gi|424584145|ref|ZP_18023771.1| endonuclease V [Escherichia coli EC1863]
gi|424748778|ref|ZP_18176906.1| endonuclease V [Escherichia coli O26:H11 str. CFSAN001629]
gi|424766571|ref|ZP_18193921.1| endonuclease V [Escherichia coli O111:H11 str. CFSAN001630]
gi|424768674|ref|ZP_18195937.1| endonuclease V [Escherichia coli O111:H8 str. CFSAN001632]
gi|425100818|ref|ZP_18503534.1| endonuclease V [Escherichia coli 3.4870]
gi|425106893|ref|ZP_18509188.1| endonuclease V [Escherichia coli 5.2239]
gi|425112895|ref|ZP_18514796.1| endonuclease V [Escherichia coli 6.0172]
gi|425117627|ref|ZP_18519395.1| endonuclease V [Escherichia coli 8.0566]
gi|425122342|ref|ZP_18524007.1| endonuclease V [Escherichia coli 8.0569]
gi|425128821|ref|ZP_18529971.1| endonuclease V [Escherichia coli 8.0586]
gi|425134590|ref|ZP_18535422.1| endonuclease V [Escherichia coli 8.2524]
gi|425141183|ref|ZP_18541544.1| endonuclease V [Escherichia coli 10.0833]
gi|425146860|ref|ZP_18546833.1| endonuclease V [Escherichia coli 10.0869]
gi|425152973|ref|ZP_18552567.1| endonuclease V [Escherichia coli 88.0221]
gi|425158874|ref|ZP_18558117.1| endonuclease V [Escherichia coli PA34]
gi|425165191|ref|ZP_18564058.1| endonuclease V [Escherichia coli FDA506]
gi|425170941|ref|ZP_18569395.1| endonuclease V [Escherichia coli FDA507]
gi|425176985|ref|ZP_18575084.1| endonuclease V [Escherichia coli FDA504]
gi|425183044|ref|ZP_18580721.1| endonuclease V [Escherichia coli FRIK1999]
gi|425189347|ref|ZP_18586598.1| endonuclease V [Escherichia coli FRIK1997]
gi|425196073|ref|ZP_18592824.1| endonuclease V [Escherichia coli NE1487]
gi|425202550|ref|ZP_18598739.1| endonuclease V [Escherichia coli NE037]
gi|425208930|ref|ZP_18604708.1| endonuclease V [Escherichia coli FRIK2001]
gi|425214728|ref|ZP_18610111.1| endonuclease V [Escherichia coli PA4]
gi|425220810|ref|ZP_18615753.1| endonuclease V [Escherichia coli PA23]
gi|425227460|ref|ZP_18621906.1| endonuclease V [Escherichia coli PA49]
gi|425233612|ref|ZP_18627632.1| endonuclease V [Escherichia coli PA45]
gi|425239537|ref|ZP_18633237.1| endonuclease V [Escherichia coli TT12B]
gi|425245775|ref|ZP_18639062.1| endonuclease V [Escherichia coli MA6]
gi|425251924|ref|ZP_18644848.1| endonuclease V [Escherichia coli 5905]
gi|425257766|ref|ZP_18650241.1| endonuclease V [Escherichia coli CB7326]
gi|425264022|ref|ZP_18655994.1| endonuclease V [Escherichia coli EC96038]
gi|425275337|ref|ZP_18666711.1| endonuclease V [Escherichia coli TW15901]
gi|425280451|ref|ZP_18671660.1| endonuclease V [Escherichia coli ARS4.2123]
gi|425285892|ref|ZP_18676900.1| endonuclease V [Escherichia coli TW00353]
gi|425291217|ref|ZP_18682020.1| endonuclease V [Escherichia coli 3006]
gi|425297482|ref|ZP_18687585.1| endonuclease V [Escherichia coli PA38]
gi|425302914|ref|ZP_18692788.1| endonuclease V [Escherichia coli 07798]
gi|425307825|ref|ZP_18697483.1| endonuclease V [Escherichia coli N1]
gi|425314183|ref|ZP_18703330.1| endonuclease V [Escherichia coli EC1735]
gi|425320165|ref|ZP_18708922.1| endonuclease V [Escherichia coli EC1736]
gi|425326305|ref|ZP_18714611.1| endonuclease V [Escherichia coli EC1737]
gi|425332614|ref|ZP_18720406.1| endonuclease V [Escherichia coli EC1846]
gi|425338791|ref|ZP_18726110.1| endonuclease V [Escherichia coli EC1847]
gi|425345084|ref|ZP_18731953.1| endonuclease V [Escherichia coli EC1848]
gi|425350923|ref|ZP_18737362.1| endonuclease V [Escherichia coli EC1849]
gi|425357194|ref|ZP_18743236.1| endonuclease V [Escherichia coli EC1850]
gi|425363146|ref|ZP_18748773.1| endonuclease V [Escherichia coli EC1856]
gi|425369411|ref|ZP_18754467.1| endonuclease V [Escherichia coli EC1862]
gi|425375716|ref|ZP_18760335.1| endonuclease V [Escherichia coli EC1864]
gi|425382363|ref|ZP_18766333.1| endonuclease V [Escherichia coli EC1865]
gi|425388603|ref|ZP_18772142.1| endonuclease V [Escherichia coli EC1866]
gi|425395332|ref|ZP_18778418.1| endonuclease V [Escherichia coli EC1868]
gi|425401387|ref|ZP_18784073.1| endonuclease V [Escherichia coli EC1869]
gi|425407483|ref|ZP_18789684.1| endonuclease V [Escherichia coli EC1870]
gi|425413840|ref|ZP_18795582.1| endonuclease V [Escherichia coli NE098]
gi|425420058|ref|ZP_18801310.1| endonuclease V [Escherichia coli FRIK523]
gi|425425028|ref|ZP_18806167.1| endonuclease V [Escherichia coli 0.1288]
gi|425431454|ref|ZP_18812043.1| endonuclease V [Escherichia coli 0.1304]
gi|428949861|ref|ZP_19022112.1| endonuclease V [Escherichia coli 88.1467]
gi|428955932|ref|ZP_19027702.1| endonuclease V [Escherichia coli 88.1042]
gi|428961889|ref|ZP_19033147.1| endonuclease V [Escherichia coli 89.0511]
gi|428968552|ref|ZP_19039236.1| endonuclease V [Escherichia coli 90.0091]
gi|428974317|ref|ZP_19044608.1| endonuclease V [Escherichia coli 90.0039]
gi|428980757|ref|ZP_19050541.1| endonuclease V [Escherichia coli 90.2281]
gi|428986496|ref|ZP_19055865.1| endonuclease V [Escherichia coli 93.0055]
gi|428992648|ref|ZP_19061615.1| endonuclease V [Escherichia coli 93.0056]
gi|428998541|ref|ZP_19067112.1| endonuclease V [Escherichia coli 94.0618]
gi|429004937|ref|ZP_19072975.1| endonuclease V [Escherichia coli 95.0183]
gi|429011015|ref|ZP_19078389.1| endonuclease V [Escherichia coli 95.1288]
gi|429017434|ref|ZP_19084290.1| endonuclease V [Escherichia coli 95.0943]
gi|429023275|ref|ZP_19089769.1| endonuclease V [Escherichia coli 96.0428]
gi|429029357|ref|ZP_19095308.1| endonuclease V [Escherichia coli 96.0427]
gi|429035499|ref|ZP_19101001.1| endonuclease V [Escherichia coli 96.0939]
gi|429041606|ref|ZP_19106674.1| endonuclease V [Escherichia coli 96.0932]
gi|429047439|ref|ZP_19112131.1| endonuclease V [Escherichia coli 96.0107]
gi|429052829|ref|ZP_19117381.1| endonuclease V [Escherichia coli 97.0003]
gi|429058364|ref|ZP_19122589.1| endonuclease V [Escherichia coli 97.1742]
gi|429063870|ref|ZP_19127813.1| endonuclease V [Escherichia coli 97.0007]
gi|429070116|ref|ZP_19133530.1| endonuclease V [Escherichia coli 99.0672]
gi|429075834|ref|ZP_19139073.1| endonuclease V [Escherichia coli 99.0678]
gi|429081083|ref|ZP_19144204.1| endonuclease V [Escherichia coli 99.0713]
gi|429721743|ref|ZP_19256655.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-9450]
gi|429773821|ref|ZP_19305831.1| endonuclease V [Escherichia coli O104:H4 str. 11-02030]
gi|429779005|ref|ZP_19310967.1| endonuclease V [Escherichia coli O104:H4 str. 11-02033-1]
gi|429782840|ref|ZP_19314761.1| endonuclease V [Escherichia coli O104:H4 str. 11-02092]
gi|429788233|ref|ZP_19320116.1| endonuclease V [Escherichia coli O104:H4 str. 11-02093]
gi|429794672|ref|ZP_19326509.1| endonuclease V [Escherichia coli O104:H4 str. 11-02281]
gi|429800632|ref|ZP_19332417.1| endonuclease V [Escherichia coli O104:H4 str. 11-02318]
gi|429804244|ref|ZP_19335997.1| endonuclease V [Escherichia coli O104:H4 str. 11-02913]
gi|429809069|ref|ZP_19340780.1| endonuclease V [Escherichia coli O104:H4 str. 11-03439]
gi|429814834|ref|ZP_19346500.1| endonuclease V [Escherichia coli O104:H4 str. 11-04080]
gi|429819794|ref|ZP_19351420.1| endonuclease V [Escherichia coli O104:H4 str. 11-03943]
gi|429829269|ref|ZP_19360243.1| endonuclease V [Escherichia coli 96.0109]
gi|429835735|ref|ZP_19365955.1| endonuclease V [Escherichia coli 97.0010]
gi|429906112|ref|ZP_19372085.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-9990]
gi|429910246|ref|ZP_19376205.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-9941]
gi|429916145|ref|ZP_19382089.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-4984]
gi|429921194|ref|ZP_19387118.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927000|ref|ZP_19392909.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-4986]
gi|429930931|ref|ZP_19396829.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-4987]
gi|429937473|ref|ZP_19403357.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-4988]
gi|429943150|ref|ZP_19409021.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-5603]
gi|429945832|ref|ZP_19411690.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-6006]
gi|429953396|ref|ZP_19419238.1| endonuclease V [Escherichia coli O104:H4 str. Ec12-0465]
gi|429956739|ref|ZP_19422569.1| endonuclease V [Escherichia coli O104:H4 str. Ec12-0466]
gi|432356031|ref|ZP_19599289.1| endonuclease V [Escherichia coli KTE2]
gi|432360466|ref|ZP_19603675.1| endonuclease V [Escherichia coli KTE4]
gi|432365267|ref|ZP_19608418.1| endonuclease V [Escherichia coli KTE5]
gi|432367502|ref|ZP_19610612.1| endonuclease V [Escherichia coli KTE10]
gi|432383909|ref|ZP_19626831.1| endonuclease V [Escherichia coli KTE15]
gi|432394680|ref|ZP_19637492.1| endonuclease V [Escherichia coli KTE21]
gi|432395402|ref|ZP_19638198.1| endonuclease V [Escherichia coli KTE25]
gi|432404393|ref|ZP_19647133.1| endonuclease V [Escherichia coli KTE26]
gi|432409087|ref|ZP_19651786.1| endonuclease V [Escherichia coli KTE28]
gi|432414311|ref|ZP_19656960.1| endonuclease V [Escherichia coli KTE39]
gi|432419516|ref|ZP_19662102.1| endonuclease V [Escherichia coli KTE44]
gi|432428661|ref|ZP_19671137.1| endonuclease V [Escherichia coli KTE181]
gi|432429755|ref|ZP_19672208.1| endonuclease V [Escherichia coli KTE187]
gi|432438974|ref|ZP_19681347.1| endonuclease V [Escherichia coli KTE188]
gi|432448687|ref|ZP_19690981.1| endonuclease V [Escherichia coli KTE191]
gi|432452270|ref|ZP_19694521.1| endonuclease V [Escherichia coli KTE193]
gi|432454245|ref|ZP_19696462.1| endonuclease V [Escherichia coli KTE201]
gi|432463403|ref|ZP_19705531.1| endonuclease V [Escherichia coli KTE204]
gi|432468403|ref|ZP_19710476.1| endonuclease V [Escherichia coli KTE205]
gi|432473364|ref|ZP_19715398.1| endonuclease V [Escherichia coli KTE206]
gi|432478359|ref|ZP_19720341.1| endonuclease V [Escherichia coli KTE208]
gi|432478947|ref|ZP_19720915.1| endonuclease V [Escherichia coli KTE210]
gi|432487790|ref|ZP_19729694.1| endonuclease V [Escherichia coli KTE212]
gi|432491828|ref|ZP_19733683.1| endonuclease V [Escherichia coli KTE213]
gi|432493269|ref|ZP_19735095.1| endonuclease V [Escherichia coli KTE214]
gi|432506907|ref|ZP_19748622.1| endonuclease V [Escherichia coli KTE220]
gi|432520209|ref|ZP_19757385.1| endonuclease V [Escherichia coli KTE228]
gi|432526489|ref|ZP_19763598.1| endonuclease V [Escherichia coli KTE230]
gi|432528851|ref|ZP_19765919.1| endonuclease V [Escherichia coli KTE233]
gi|432531789|ref|ZP_19768808.1| endonuclease V [Escherichia coli KTE234]
gi|432540377|ref|ZP_19777265.1| endonuclease V [Escherichia coli KTE235]
gi|432545859|ref|ZP_19782677.1| endonuclease V [Escherichia coli KTE236]
gi|432551340|ref|ZP_19788084.1| endonuclease V [Escherichia coli KTE237]
gi|432556251|ref|ZP_19792963.1| endonuclease V [Escherichia coli KTE47]
gi|432566373|ref|ZP_19802925.1| endonuclease V [Escherichia coli KTE51]
gi|432571290|ref|ZP_19807791.1| endonuclease V [Escherichia coli KTE53]
gi|432576258|ref|ZP_19812723.1| endonuclease V [Escherichia coli KTE55]
gi|432578269|ref|ZP_19814712.1| endonuclease V [Escherichia coli KTE56]
gi|432585594|ref|ZP_19821981.1| endonuclease V [Escherichia coli KTE57]
gi|432590468|ref|ZP_19826815.1| endonuclease V [Escherichia coli KTE58]
gi|432595269|ref|ZP_19831575.1| endonuclease V [Escherichia coli KTE60]
gi|432600150|ref|ZP_19836417.1| endonuclease V [Escherichia coli KTE62]
gi|432605453|ref|ZP_19841659.1| endonuclease V [Escherichia coli KTE67]
gi|432614015|ref|ZP_19850169.1| endonuclease V [Escherichia coli KTE72]
gi|432619310|ref|ZP_19855406.1| endonuclease V [Escherichia coli KTE75]
gi|432624392|ref|ZP_19860401.1| endonuclease V [Escherichia coli KTE76]
gi|432629613|ref|ZP_19865573.1| endonuclease V [Escherichia coli KTE77]
gi|432633942|ref|ZP_19869856.1| endonuclease V [Escherichia coli KTE80]
gi|432634893|ref|ZP_19870788.1| endonuclease V [Escherichia coli KTE81]
gi|432643593|ref|ZP_19879411.1| endonuclease V [Escherichia coli KTE83]
gi|432648683|ref|ZP_19884465.1| endonuclease V [Escherichia coli KTE86]
gi|432653670|ref|ZP_19889405.1| endonuclease V [Escherichia coli KTE87]
gi|432658248|ref|ZP_19893942.1| endonuclease V [Escherichia coli KTE93]
gi|432658839|ref|ZP_19894510.1| endonuclease V [Escherichia coli KTE111]
gi|432663716|ref|ZP_19899323.1| endonuclease V [Escherichia coli KTE116]
gi|432673087|ref|ZP_19908601.1| endonuclease V [Escherichia coli KTE119]
gi|432677178|ref|ZP_19912615.1| endonuclease V [Escherichia coli KTE142]
gi|432683472|ref|ZP_19918802.1| endonuclease V [Escherichia coli KTE156]
gi|432689318|ref|ZP_19924579.1| endonuclease V [Escherichia coli KTE161]
gi|432702164|ref|ZP_19937298.1| endonuclease V [Escherichia coli KTE171]
gi|432715870|ref|ZP_19950892.1| endonuclease V [Escherichia coli KTE8]
gi|432716627|ref|ZP_19951637.1| endonuclease V [Escherichia coli KTE9]
gi|432721159|ref|ZP_19956093.1| endonuclease V [Escherichia coli KTE17]
gi|432730319|ref|ZP_19965184.1| endonuclease V [Escherichia coli KTE45]
gi|432735042|ref|ZP_19969852.1| endonuclease V [Escherichia coli KTE42]
gi|432743776|ref|ZP_19978488.1| endonuclease V [Escherichia coli KTE23]
gi|432756970|ref|ZP_19991511.1| endonuclease V [Escherichia coli KTE22]
gi|432761864|ref|ZP_19996338.1| endonuclease V [Escherichia coli KTE46]
gi|432762901|ref|ZP_19997360.1| endonuclease V [Escherichia coli KTE48]
gi|432768363|ref|ZP_20002752.1| endonuclease V [Escherichia coli KTE50]
gi|432772769|ref|ZP_20007078.1| endonuclease V [Escherichia coli KTE54]
gi|432781336|ref|ZP_20015544.1| endonuclease V [Escherichia coli KTE63]
gi|432790038|ref|ZP_20024163.1| endonuclease V [Escherichia coli KTE65]
gi|432795260|ref|ZP_20029328.1| endonuclease V [Escherichia coli KTE78]
gi|432796769|ref|ZP_20030800.1| endonuclease V [Escherichia coli KTE79]
gi|432799919|ref|ZP_20033918.1| endonuclease V [Escherichia coli KTE84]
gi|432817831|ref|ZP_20051559.1| endonuclease V [Escherichia coli KTE115]
gi|432818805|ref|ZP_20052524.1| endonuclease V [Escherichia coli KTE118]
gi|432824935|ref|ZP_20058596.1| endonuclease V [Escherichia coli KTE123]
gi|432837092|ref|ZP_20070593.1| endonuclease V [Escherichia coli KTE140]
gi|432847368|ref|ZP_20079788.1| endonuclease V [Escherichia coli KTE141]
gi|432856074|ref|ZP_20083681.1| endonuclease V [Escherichia coli KTE144]
gi|432857427|ref|ZP_20084330.1| endonuclease V [Escherichia coli KTE146]
gi|432878470|ref|ZP_20095808.1| endonuclease V [Escherichia coli KTE154]
gi|432882800|ref|ZP_20098464.1| endonuclease V [Escherichia coli KTE158]
gi|432891759|ref|ZP_20104323.1| endonuclease V [Escherichia coli KTE165]
gi|432895987|ref|ZP_20107305.1| endonuclease V [Escherichia coli KTE192]
gi|432907905|ref|ZP_20116216.1| endonuclease V [Escherichia coli KTE194]
gi|432915891|ref|ZP_20121058.1| endonuclease V [Escherichia coli KTE190]
gi|432940911|ref|ZP_20138730.1| endonuclease V [Escherichia coli KTE183]
gi|432951407|ref|ZP_20144986.1| endonuclease V [Escherichia coli KTE197]
gi|432957941|ref|ZP_20149150.1| endonuclease V [Escherichia coli KTE202]
gi|432969592|ref|ZP_20158493.1| endonuclease V [Escherichia coli KTE207]
gi|432976238|ref|ZP_20165068.1| endonuclease V [Escherichia coli KTE209]
gi|432987859|ref|ZP_20176567.1| endonuclease V [Escherichia coli KTE215]
gi|432988509|ref|ZP_20177185.1| endonuclease V [Escherichia coli KTE217]
gi|432993219|ref|ZP_20181847.1| endonuclease V [Escherichia coli KTE218]
gi|432997678|ref|ZP_20186255.1| endonuclease V [Escherichia coli KTE223]
gi|433002955|ref|ZP_20191460.1| endonuclease V [Escherichia coli KTE227]
gi|433010215|ref|ZP_20198623.1| endonuclease V [Escherichia coli KTE229]
gi|433021256|ref|ZP_20209325.1| endonuclease V [Escherichia coli KTE105]
gi|433025927|ref|ZP_20213887.1| endonuclease V [Escherichia coli KTE106]
gi|433030962|ref|ZP_20218800.1| endonuclease V [Escherichia coli KTE109]
gi|433035935|ref|ZP_20223615.1| endonuclease V [Escherichia coli KTE112]
gi|433041031|ref|ZP_20228612.1| endonuclease V [Escherichia coli KTE113]
gi|433050469|ref|ZP_20237780.1| endonuclease V [Escherichia coli KTE120]
gi|433055626|ref|ZP_20242772.1| endonuclease V [Escherichia coli KTE122]
gi|433060544|ref|ZP_20247568.1| endonuclease V [Escherichia coli KTE124]
gi|433065463|ref|ZP_20252359.1| endonuclease V [Escherichia coli KTE125]
gi|433070405|ref|ZP_20257160.1| endonuclease V [Escherichia coli KTE128]
gi|433075352|ref|ZP_20261980.1| endonuclease V [Escherichia coli KTE129]
gi|433080227|ref|ZP_20266737.1| endonuclease V [Escherichia coli KTE131]
gi|433084943|ref|ZP_20271382.1| endonuclease V [Escherichia coli KTE133]
gi|433089748|ref|ZP_20276099.1| endonuclease V [Escherichia coli KTE137]
gi|433103616|ref|ZP_20289678.1| endonuclease V [Escherichia coli KTE145]
gi|433113294|ref|ZP_20299134.1| endonuclease V [Escherichia coli KTE150]
gi|433117952|ref|ZP_20303724.1| endonuclease V [Escherichia coli KTE153]
gi|433122681|ref|ZP_20308330.1| endonuclease V [Escherichia coli KTE157]
gi|433127654|ref|ZP_20313187.1| endonuclease V [Escherichia coli KTE160]
gi|433132580|ref|ZP_20317995.1| endonuclease V [Escherichia coli KTE163]
gi|433137251|ref|ZP_20322569.1| endonuclease V [Escherichia coli KTE166]
gi|433141727|ref|ZP_20326957.1| endonuclease V [Escherichia coli KTE167]
gi|433151678|ref|ZP_20336668.1| endonuclease V [Escherichia coli KTE174]
gi|433156249|ref|ZP_20341167.1| endonuclease V [Escherichia coli KTE176]
gi|433161157|ref|ZP_20345964.1| endonuclease V [Escherichia coli KTE177]
gi|433166035|ref|ZP_20350754.1| endonuclease V [Escherichia coli KTE179]
gi|433171033|ref|ZP_20355642.1| endonuclease V [Escherichia coli KTE180]
gi|433175932|ref|ZP_20360428.1| endonuclease V [Escherichia coli KTE232]
gi|433180872|ref|ZP_20365237.1| endonuclease V [Escherichia coli KTE82]
gi|433185809|ref|ZP_20370036.1| endonuclease V [Escherichia coli KTE85]
gi|433190822|ref|ZP_20374902.1| endonuclease V [Escherichia coli KTE88]
gi|433200785|ref|ZP_20384660.1| endonuclease V [Escherichia coli KTE94]
gi|433205755|ref|ZP_20389490.1| endonuclease V [Escherichia coli KTE95]
gi|433210215|ref|ZP_20393870.1| endonuclease V [Escherichia coli KTE97]
gi|433215052|ref|ZP_20398618.1| endonuclease V [Escherichia coli KTE99]
gi|433326303|ref|ZP_20403188.1| endonuclease V [Escherichia coli J96]
gi|442589922|ref|ZP_21008711.1| Endonuclease V [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|442599353|ref|ZP_21017072.1| Endonuclease V [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|442607405|ref|ZP_21022176.1| Endonuclease V [Escherichia coli Nissle 1917]
gi|443615480|ref|YP_007379336.1| endonuclease V [Escherichia coli APEC O78]
gi|444927754|ref|ZP_21247003.1| endonuclease V [Escherichia coli 09BKT078844]
gi|444933380|ref|ZP_21252372.1| endonuclease V [Escherichia coli 99.0814]
gi|444938821|ref|ZP_21257539.1| endonuclease V [Escherichia coli 99.0815]
gi|444944452|ref|ZP_21262922.1| endonuclease V [Escherichia coli 99.0816]
gi|444949160|ref|ZP_21267458.1| endonuclease V [Escherichia coli 99.0839]
gi|444955534|ref|ZP_21273585.1| endonuclease V [Escherichia coli 99.0848]
gi|444960956|ref|ZP_21278762.1| endonuclease V [Escherichia coli 99.1753]
gi|444966161|ref|ZP_21283705.1| endonuclease V [Escherichia coli 99.1775]
gi|444972235|ref|ZP_21289559.1| endonuclease V [Escherichia coli 99.1793]
gi|444977483|ref|ZP_21294543.1| endonuclease V [Escherichia coli 99.1805]
gi|444982872|ref|ZP_21299763.1| endonuclease V [Escherichia coli ATCC 700728]
gi|444988236|ref|ZP_21304998.1| endonuclease V [Escherichia coli PA11]
gi|444993613|ref|ZP_21310240.1| endonuclease V [Escherichia coli PA19]
gi|444998797|ref|ZP_21315283.1| endonuclease V [Escherichia coli PA13]
gi|445004305|ref|ZP_21320681.1| endonuclease V [Escherichia coli PA2]
gi|445009735|ref|ZP_21325948.1| endonuclease V [Escherichia coli PA47]
gi|445014846|ref|ZP_21330937.1| endonuclease V [Escherichia coli PA48]
gi|445020731|ref|ZP_21336680.1| endonuclease V [Escherichia coli PA8]
gi|445026161|ref|ZP_21341970.1| endonuclease V [Escherichia coli 7.1982]
gi|445031575|ref|ZP_21347226.1| endonuclease V [Escherichia coli 99.1781]
gi|445037015|ref|ZP_21352527.1| endonuclease V [Escherichia coli 99.1762]
gi|445042712|ref|ZP_21358069.1| endonuclease V [Escherichia coli PA35]
gi|445047873|ref|ZP_21363107.1| endonuclease V [Escherichia coli 3.4880]
gi|445053456|ref|ZP_21368455.1| endonuclease V [Escherichia coli 95.0083]
gi|445061437|ref|ZP_21373940.1| endonuclease V [Escherichia coli 99.0670]
gi|450196281|ref|ZP_21892809.1| endonuclease V [Escherichia coli SEPT362]
gi|450253904|ref|ZP_21902467.1| endonuclease V [Escherichia coli S17]
gi|452970662|ref|ZP_21968889.1| endonuclease VIII [Escherichia coli O157:H7 str. EC4009]
gi|56405069|sp|P68739.1|NFI_ECOLI RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|56405070|sp|P68740.1|NFI_ECOL6 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|56405071|sp|P68741.1|NFI_ECO57 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|122422156|sp|Q1R5W4.1|NFI_ECOUT RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|123147436|sp|Q0TA67.1|NFI_ECOL5 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|166233958|sp|A1AIG9.1|NFI_ECOK1 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|189029069|sp|B1IUP9.1|NFI_ECOLC RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730049|sp|B7MIY4.1|NFI_ECO45 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730050|sp|B5Z094.1|NFI_ECO5E RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730051|sp|B7NRT1.1|NFI_ECO7I RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730052|sp|B7M7Q7.1|NFI_ECO8A RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730053|sp|B1XC01.1|NFI_ECODH RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730054|sp|B7NFT9.1|NFI_ECOLU RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730056|sp|B1LNV0.1|NFI_ECOSM RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730058|sp|B7LUK4.1|NFI_ESCF3 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|254767274|sp|B7UPF3.1|NFI_ECO27 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|254767275|sp|B7LA92.1|NFI_ECO55 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|254767276|sp|B7N2K0.1|NFI_ECO81 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|259511731|sp|C5A0T9.1|NFI_ECOBW RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|12518927|gb|AAG59195.1|AE005631_10 endonuclease V (deoxyinosine 3'endoduclease) [Escherichia coli
O157:H7 str. EDL933]
gi|26111200|gb|AAN83383.1|AE016770_183 Endonuclease V [Escherichia coli CFT073]
gi|13364397|dbj|BAB38344.1| endonuclease V [Escherichia coli O157:H7 str. Sakai]
gi|85676071|dbj|BAE77321.1| endonuclease V [Escherichia coli str. K12 substr. W3110]
gi|87082357|gb|AAC76972.2| endonuclease V; deoxyinosine 3' endonuclease [Escherichia coli str.
K-12 substr. MG1655]
gi|91074369|gb|ABE09250.1| endonuclease V (deoxyinosine 3'endoduclease) [Escherichia coli
UTI89]
gi|110345925|gb|ABG72162.1| endonuclease V [Escherichia coli 536]
gi|115515384|gb|ABJ03459.1| endonuclease V [Escherichia coli APEC O1]
gi|169756927|gb|ACA79626.1| Deoxyribonuclease V [Escherichia coli ATCC 8739]
gi|169891294|gb|ACB05001.1| endonuclease V [Escherichia coli str. K-12 substr. DH10B]
gi|170519169|gb|ACB17347.1| endonuclease V [Escherichia coli SMS-3-5]
gi|187767369|gb|EDU31213.1| endonuclease V [Escherichia coli O157:H7 str. EC4196]
gi|188014022|gb|EDU52144.1| endonuclease V [Escherichia coli O157:H7 str. EC4113]
gi|188491462|gb|EDU66565.1| endonuclease V [Escherichia coli 53638]
gi|189001851|gb|EDU70837.1| endonuclease V [Escherichia coli O157:H7 str. EC4076]
gi|189354600|gb|EDU73019.1| endonuclease V [Escherichia coli O157:H7 str. EC4401]
gi|189359770|gb|EDU78189.1| endonuclease V [Escherichia coli O157:H7 str. EC4486]
gi|189365460|gb|EDU83876.1| endonuclease V [Escherichia coli O157:H7 str. EC4501]
gi|189370165|gb|EDU88581.1| endonuclease V [Escherichia coli O157:H7 str. EC869]
gi|189379143|gb|EDU97559.1| endonuclease V [Escherichia coli O157:H7 str. EC508]
gi|190901290|gb|EDV61058.1| endonuclease V [Escherichia coli B7A]
gi|190905430|gb|EDV65061.1| endonuclease V [Escherichia coli F11]
gi|192925928|gb|EDV80575.1| endonuclease V [Escherichia coli E22]
gi|192958802|gb|EDV89239.1| endonuclease V [Escherichia coli E110019]
gi|194411995|gb|EDX28308.1| endonuclease V [Escherichia coli B171]
gi|194421276|gb|EDX37296.1| endonuclease V [Escherichia coli 101-1]
gi|208728681|gb|EDZ78282.1| endonuclease V [Escherichia coli O157:H7 str. EC4206]
gi|208733714|gb|EDZ82401.1| endonuclease V [Escherichia coli O157:H7 str. EC4045]
gi|208738549|gb|EDZ86231.1| endonuclease V [Escherichia coli O157:H7 str. EC4042]
gi|209157523|gb|ACI34956.1| endonuclease V [Escherichia coli O157:H7 str. EC4115]
gi|209751700|gb|ACI74157.1| endonuclease V [Escherichia coli]
gi|209751702|gb|ACI74158.1| endonuclease V [Escherichia coli]
gi|209751704|gb|ACI74159.1| endonuclease V [Escherichia coli]
gi|209751706|gb|ACI74160.1| endonuclease V [Escherichia coli]
gi|215267402|emb|CAS11853.1| endonuclease V [Escherichia coli O127:H6 str. E2348/69]
gi|217322164|gb|EEC30588.1| endonuclease V [Escherichia coli O157:H7 str. TW14588]
gi|218354438|emb|CAV01249.1| endonuclease V [Escherichia coli 55989]
gi|218358559|emb|CAQ91207.1| endonuclease V [Escherichia fergusonii ATCC 35469]
gi|218363322|emb|CAR00972.1| endonuclease V [Escherichia coli IAI1]
gi|218367833|emb|CAR05628.1| endonuclease V [Escherichia coli S88]
gi|218372619|emb|CAR20494.1| endonuclease V [Escherichia coli IAI39]
gi|218429843|emb|CAR10669.1| endonuclease V [Escherichia coli ED1a]
gi|218434714|emb|CAR15646.1| endonuclease V [Escherichia coli UMN026]
gi|222035709|emb|CAP78454.1| endonuclease V [Escherichia coli LF82]
gi|226903078|gb|EEH89337.1| endonuclease V [Escherichia sp. 3_2_53FAA]
gi|227837546|gb|EEJ48012.1| deoxyribonuclease V [Escherichia coli 83972]
gi|238861031|gb|ACR63029.1| endonuclease V [Escherichia coli BW2952]
gi|242379529|emb|CAQ34345.1| endonuclease V (deoxyinosine 3'-endonuclease) [Escherichia coli
BL21(DE3)]
gi|253326416|gb|ACT31018.1| Deoxyribonuclease V [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975841|gb|ACT41512.1| endonuclease V [Escherichia coli B str. REL606]
gi|253979997|gb|ACT45667.1| endonuclease V [Escherichia coli BL21(DE3)]
gi|254595396|gb|ACT74757.1| endonuclease V (deoxyinosine 3'endoduclease) [Escherichia coli
O157:H7 str. TW14359]
gi|257756757|dbj|BAI28259.1| endonuclease V [Escherichia coli O26:H11 str. 11368]
gi|257761945|dbj|BAI33442.1| endonuclease V [Escherichia coli O103:H2 str. 12009]
gi|257767065|dbj|BAI38560.1| endonuclease V [Escherichia coli O111:H- str. 11128]
gi|260451174|gb|ACX41596.1| Deoxyribonuclease V [Escherichia coli DH1]
gi|290765286|gb|ADD59247.1| Endonuclease V [Escherichia coli O55:H7 str. CB9615]
gi|291321335|gb|EFE60776.1| deoxyribonuclease V [Escherichia coli B088]
gi|291425383|gb|EFE98423.1| endonuclease V [Escherichia coli FVEC1412]
gi|291430827|gb|EFF03824.1| endonuclease V [Escherichia coli B185]
gi|291468029|gb|EFF10528.1| endonuclease V [Escherichia coli B354]
gi|294492747|gb|ADE91503.1| endonuclease V [Escherichia coli IHE3034]
gi|298276242|gb|EFI17763.1| endonuclease V [Escherichia coli FVEC1302]
gi|299880888|gb|EFI89099.1| deoxyribonuclease V [Escherichia coli MS 196-1]
gi|300300397|gb|EFJ56782.1| deoxyribonuclease V [Escherichia coli MS 185-1]
gi|300306535|gb|EFJ61055.1| deoxyribonuclease V [Escherichia coli MS 200-1]
gi|300318270|gb|EFJ68054.1| deoxyribonuclease V [Escherichia coli MS 175-1]
gi|300358663|gb|EFJ74533.1| deoxyribonuclease V [Escherichia coli MS 198-1]
gi|300400719|gb|EFJ84257.1| deoxyribonuclease V [Escherichia coli MS 84-1]
gi|300409456|gb|EFJ92994.1| deoxyribonuclease V [Escherichia coli MS 45-1]
gi|300413509|gb|EFJ96819.1| deoxyribonuclease V [Escherichia coli MS 115-1]
gi|300452999|gb|EFK16619.1| deoxyribonuclease V [Escherichia coli MS 116-1]
gi|300842352|gb|EFK70112.1| deoxyribonuclease V [Escherichia coli MS 124-1]
gi|301075995|gb|EFK90801.1| deoxyribonuclease V [Escherichia coli MS 146-1]
gi|305854618|gb|EFM55054.1| endonuclease V [Escherichia coli NC101]
gi|307556141|gb|ADN48916.1| endonuclease V [Escherichia coli ABU 83972]
gi|307628385|gb|ADN72689.1| endonuclease V [Escherichia coli UM146]
gi|308118714|gb|EFO55976.1| deoxyribonuclease V [Escherichia coli MS 145-7]
gi|309704414|emb|CBJ03763.1| endonuclease V [Escherichia coli ETEC H10407]
gi|310331383|gb|EFP98648.1| endonuclease V [Escherichia coli 1827-70]
gi|312290023|gb|EFR17910.1| endonuclease V [Escherichia coli 2362-75]
gi|312948572|gb|ADR29399.1| endonuclease V [Escherichia coli O83:H1 str. NRG 857C]
gi|315138555|dbj|BAJ45714.1| endonuclease V [Escherichia coli DH1]
gi|315252734|gb|EFU32702.1| deoxyribonuclease V [Escherichia coli MS 85-1]
gi|315288343|gb|EFU47742.1| deoxyribonuclease V [Escherichia coli MS 110-3]
gi|315294345|gb|EFU53696.1| deoxyribonuclease V [Escherichia coli MS 153-1]
gi|315300741|gb|EFU59966.1| deoxyribonuclease V [Escherichia coli MS 16-3]
gi|315617362|gb|EFU97968.1| endonuclease V [Escherichia coli 3431]
gi|320179539|gb|EFW54490.1| Endonuclease V [Shigella boydii ATCC 9905]
gi|320190905|gb|EFW65555.1| Endonuclease V [Escherichia coli O157:H7 str. EC1212]
gi|320197107|gb|EFW71725.1| Endonuclease V [Escherichia coli WV_060327]
gi|320639089|gb|EFX08729.1| endonuclease V [Escherichia coli O157:H7 str. G5101]
gi|320655135|gb|EFX23091.1| endonuclease V [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320660779|gb|EFX28233.1| endonuclease V [Escherichia coli O55:H7 str. USDA 5905]
gi|320665897|gb|EFX32928.1| endonuclease V [Escherichia coli O157:H7 str. LSU-61]
gi|323155554|gb|EFZ41731.1| endonuclease V [Escherichia coli EPECa14]
gi|323174490|gb|EFZ60115.1| endonuclease V [Escherichia coli LT-68]
gi|323177553|gb|EFZ63138.1| endonuclease V [Escherichia coli OK1180]
gi|323190145|gb|EFZ75423.1| endonuclease V [Escherichia coli RN587/1]
gi|323938885|gb|EGB35105.1| endonuclease V [Escherichia coli E482]
gi|323943613|gb|EGB39721.1| endonuclease V [Escherichia coli H120]
gi|323948831|gb|EGB44728.1| endonuclease V [Escherichia coli H252]
gi|323953790|gb|EGB49597.1| endonuclease V [Escherichia coli H263]
gi|323958925|gb|EGB54600.1| endonuclease V [Escherichia coli H489]
gi|323969072|gb|EGB64380.1| endonuclease V [Escherichia coli TA007]
gi|323974198|gb|EGB69330.1| endonuclease V [Escherichia coli TW10509]
gi|324009482|gb|EGB78701.1| deoxyribonuclease V [Escherichia coli MS 57-2]
gi|324015271|gb|EGB84490.1| deoxyribonuclease V [Escherichia coli MS 60-1]
gi|324115430|gb|EGC09375.1| endonuclease V [Escherichia coli E1167]
gi|326347151|gb|EGD70881.1| Endonuclease V [Escherichia coli O157:H7 str. 1125]
gi|326347598|gb|EGD71320.1| Endonuclease V [Escherichia coli O157:H7 str. 1044]
gi|330908313|gb|EGH36832.1| endonuclease 5 [Escherichia coli AA86]
gi|331041317|gb|EGI13469.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli M605]
gi|331052341|gb|EGI24379.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli TA206]
gi|331057172|gb|EGI29164.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli TA143]
gi|331077050|gb|EGI48266.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli H299]
gi|332083887|gb|EGI89100.1| endonuclease V [Shigella boydii 5216-82]
gi|332345988|gb|AEE59322.1| endonuclease V [Escherichia coli UMNK88]
gi|338767821|gb|EGP22630.1| Endonuclease V [Escherichia coli PCN033]
gi|339417720|gb|AEJ59392.1| endonuclease V [Escherichia coli UMNF18]
gi|340732014|gb|EGR61153.1| endonuclease V [Escherichia coli O104:H4 str. 01-09591]
gi|340737585|gb|EGR71840.1| endonuclease V [Escherichia coli O104:H4 str. LB226692]
gi|341921719|gb|EGT71315.1| hypothetical protein C22711_5351 [Escherichia coli O104:H4 str.
C227-11]
gi|342361171|gb|EGU25317.1| endonuclease V [Escherichia coli XH140A]
gi|344191694|gb|EGV45804.1| endonuclease V [Escherichia coli XH001]
gi|345330570|gb|EGW63039.1| endonuclease V [Escherichia coli STEC_C165-02]
gi|345331580|gb|EGW64040.1| endonuclease V [Escherichia coli 2534-86]
gi|345332765|gb|EGW65220.1| endonuclease V [Escherichia coli STEC_B2F1]
gi|345352642|gb|EGW84887.1| endonuclease V [Escherichia coli STEC_DG131-3]
gi|345357372|gb|EGW89570.1| endonuclease V [Escherichia coli STEC_EH250]
gi|345368355|gb|EGX00353.1| endonuclease V [Escherichia coli G58-1]
gi|345368890|gb|EGX00882.1| endonuclease V [Escherichia coli STEC_MHI813]
gi|345384448|gb|EGX14312.1| endonuclease V [Escherichia coli STEC_S1191]
gi|345389536|gb|EGX19341.1| endonuclease V [Escherichia coli TX1999]
gi|349740647|gb|AEQ15353.1| endonuclease V [Escherichia coli O7:K1 str. CE10]
gi|354857011|gb|EHF17468.1| endonuclease V [Escherichia coli O104:H4 str. C236-11]
gi|354860804|gb|EHF21245.1| endonuclease V [Escherichia coli O104:H4 str. 04-8351]
gi|354861328|gb|EHF21768.1| endonuclease V [Escherichia coli O104:H4 str. C227-11]
gi|354870034|gb|EHF30440.1| endonuclease V [Escherichia coli O104:H4 str. 09-7901]
gi|354875800|gb|EHF36165.1| endonuclease V [Escherichia coli O104:H4 str. 11-3677]
gi|354884523|gb|EHF44835.1| endonuclease V [Escherichia coli O104:H4 str. 11-4404]
gi|354888301|gb|EHF48561.1| endonuclease V [Escherichia coli O104:H4 str. 11-4522]
gi|354891854|gb|EHF52073.1| endonuclease V [Escherichia coli O104:H4 str. 11-4623]
gi|354903886|gb|EHF63985.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354907408|gb|EHF67471.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354909183|gb|EHF69217.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354911913|gb|EHF71916.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354919794|gb|EHF79734.1| endonuclease V [Escherichia coli O104:H4 str. 11-4632 C5]
gi|355349337|gb|EHF98545.1| endonuclease V [Escherichia coli cloneA_i1]
gi|355422865|gb|AER87062.1| endonuclease V [Escherichia coli str. 'clone D i2']
gi|355427785|gb|AER91981.1| endonuclease V [Escherichia coli str. 'clone D i14']
gi|359334112|dbj|BAL40559.1| endonuclease V [Escherichia coli str. K-12 substr. MDS42]
gi|371592403|gb|EHN81309.1| endonuclease V [Escherichia coli TA124]
gi|371601642|gb|EHN90373.1| endonuclease V [Escherichia coli H397]
gi|371616160|gb|EHO04528.1| endonuclease V [Escherichia coli B093]
gi|373243277|gb|EHP62790.1| endonuclease V [Escherichia coli 4_1_47FAA]
gi|374361442|gb|AEZ43149.1| endonuclease V [Escherichia coli O55:H7 str. RM12579]
gi|377838452|gb|EHU03570.1| endonuclease V [Escherichia coli DEC1C]
gi|377838486|gb|EHU03603.1| endonuclease V [Escherichia coli DEC1A]
gi|377840939|gb|EHU06008.1| endonuclease V [Escherichia coli DEC1B]
gi|377852384|gb|EHU17308.1| endonuclease V [Escherichia coli DEC1D]
gi|377855589|gb|EHU20458.1| endonuclease V [Escherichia coli DEC1E]
gi|377856996|gb|EHU21852.1| endonuclease V [Escherichia coli DEC2A]
gi|377869916|gb|EHU34617.1| endonuclease V [Escherichia coli DEC2B]
gi|377871533|gb|EHU36195.1| endonuclease V [Escherichia coli DEC2C]
gi|377873089|gb|EHU37728.1| endonuclease V [Escherichia coli DEC2D]
gi|377885198|gb|EHU49698.1| endonuclease V [Escherichia coli DEC2E]
gi|377890733|gb|EHU55189.1| endonuclease V [Escherichia coli DEC3A]
gi|377901367|gb|EHU65687.1| endonuclease V [Escherichia coli DEC3C]
gi|377902846|gb|EHU67148.1| endonuclease V [Escherichia coli DEC3B]
gi|377902876|gb|EHU67177.1| endonuclease V [Escherichia coli DEC3D]
gi|377906126|gb|EHU70381.1| endonuclease V [Escherichia coli DEC3E]
gi|377922719|gb|EHU86700.1| endonuclease V [Escherichia coli DEC4A]
gi|377925863|gb|EHU89800.1| endonuclease V [Escherichia coli DEC4B]
gi|377935391|gb|EHU99190.1| endonuclease V [Escherichia coli DEC4C]
gi|377943353|gb|EHV07073.1| endonuclease V [Escherichia coli DEC4E]
gi|377952184|gb|EHV15782.1| endonuclease V [Escherichia coli DEC4D]
gi|377956632|gb|EHV20179.1| endonuclease V [Escherichia coli DEC5A]
gi|377958269|gb|EHV21785.1| endonuclease V [Escherichia coli DEC5B]
gi|377967783|gb|EHV31186.1| endonuclease V [Escherichia coli DEC4F]
gi|377968511|gb|EHV31903.1| endonuclease V [Escherichia coli DEC5C]
gi|377970162|gb|EHV33533.1| endonuclease V [Escherichia coli DEC5D]
gi|377979725|gb|EHV43001.1| endonuclease V [Escherichia coli DEC5E]
gi|377988005|gb|EHV51187.1| endonuclease V [Escherichia coli DEC6B]
gi|377988674|gb|EHV51851.1| endonuclease V [Escherichia coli DEC6A]
gi|377991138|gb|EHV54290.1| endonuclease V [Escherichia coli DEC6C]
gi|378003335|gb|EHV66379.1| endonuclease V [Escherichia coli DEC6D]
gi|378005601|gb|EHV68602.1| endonuclease V [Escherichia coli DEC6E]
gi|378009645|gb|EHV72600.1| endonuclease V [Escherichia coli DEC7A]
gi|378020728|gb|EHV83467.1| endonuclease V [Escherichia coli DEC7C]
gi|378023065|gb|EHV85744.1| endonuclease V [Escherichia coli DEC7D]
gi|378033846|gb|EHV96417.1| endonuclease V [Escherichia coli DEC7E]
gi|378042033|gb|EHW04487.1| endonuclease V [Escherichia coli DEC8A]
gi|378045019|gb|EHW07426.1| endonuclease V [Escherichia coli DEC8B]
gi|378047522|gb|EHW09885.1| endonuclease V [Escherichia coli DEC8C]
gi|378057368|gb|EHW19601.1| endonuclease V [Escherichia coli DEC8D]
gi|378067537|gb|EHW29656.1| endonuclease V [Escherichia coli DEC9A]
gi|378075263|gb|EHW37290.1| endonuclease V [Escherichia coli DEC8E]
gi|378085920|gb|EHW47802.1| endonuclease V [Escherichia coli DEC9D]
gi|378088516|gb|EHW50368.1| endonuclease V [Escherichia coli DEC9E]
gi|378093229|gb|EHW55046.1| endonuclease V [Escherichia coli DEC10A]
gi|378113839|gb|EHW75399.1| endonuclease V [Escherichia coli DEC10D]
gi|378120416|gb|EHW81893.1| endonuclease V [Escherichia coli DEC10B]
gi|378120655|gb|EHW82125.1| endonuclease V [Escherichia coli DEC10C]
gi|378124049|gb|EHW85463.1| endonuclease V [Escherichia coli DEC11A]
gi|378124082|gb|EHW85495.1| endonuclease V [Escherichia coli DEC10F]
gi|378137783|gb|EHW99051.1| endonuclease V [Escherichia coli DEC11B]
gi|378143645|gb|EHX04835.1| endonuclease V [Escherichia coli DEC11D]
gi|378145415|gb|EHX06580.1| endonuclease V [Escherichia coli DEC11C]
gi|378153924|gb|EHX15002.1| endonuclease V [Escherichia coli DEC11E]
gi|378160709|gb|EHX21700.1| endonuclease V [Escherichia coli DEC12B]
gi|378163991|gb|EHX24941.1| endonuclease V [Escherichia coli DEC12A]
gi|378164488|gb|EHX25432.1| endonuclease V [Escherichia coli DEC12C]
gi|378178621|gb|EHX39384.1| endonuclease V [Escherichia coli DEC12D]
gi|378181800|gb|EHX42462.1| endonuclease V [Escherichia coli DEC12E]
gi|378232516|gb|EHX92615.1| endonuclease V [Escherichia coli DEC15A]
gi|378239404|gb|EHX99394.1| endonuclease V [Escherichia coli DEC15B]
gi|378242177|gb|EHY02140.1| endonuclease V [Escherichia coli DEC15C]
gi|378250485|gb|EHY10390.1| endonuclease V [Escherichia coli DEC15D]
gi|378254892|gb|EHY14753.1| endonuclease V [Escherichia coli DEC15E]
gi|380345990|gb|EIA34295.1| endonuclease V [Escherichia coli SCI-07]
gi|383105414|gb|AFG42923.1| Endonuclease V [Escherichia coli P12b]
gi|384469699|gb|EIE53845.1| endonuclease V [Escherichia coli AI27]
gi|385153815|gb|EIF15841.1| endonuclease V [Escherichia coli O32:H37 str. P4]
gi|385707986|gb|EIG45006.1| endonuclease V [Escherichia coli H730]
gi|386119837|gb|EIG68479.1| endonuclease V [Escherichia sp. 4_1_40B]
gi|386151357|gb|EIH02646.1| deoxyribonuclease V [Escherichia coli 5.0588]
gi|386155526|gb|EIH11877.1| deoxyribonuclease V [Escherichia coli 97.0259]
gi|386161467|gb|EIH23270.1| deoxyribonuclease V [Escherichia coli 1.2264]
gi|386165805|gb|EIH32325.1| deoxyribonuclease V [Escherichia coli 96.0497]
gi|386174308|gb|EIH46308.1| deoxyribonuclease V [Escherichia coli 99.0741]
gi|386181699|gb|EIH64460.1| deoxyribonuclease V [Escherichia coli 93.0624]
gi|386187148|gb|EIH75971.1| deoxyribonuclease V [Escherichia coli 4.0522]
gi|386194778|gb|EIH89021.1| deoxyribonuclease V [Escherichia coli JB1-95]
gi|386208048|gb|EII12553.1| deoxyribonuclease V [Escherichia coli 5.0959]
gi|386214979|gb|EII25383.1| deoxyribonuclease V [Escherichia coli 9.0111]
gi|386220457|gb|EII36921.1| deoxyribonuclease V [Escherichia coli 4.0967]
gi|386225419|gb|EII47749.1| deoxyribonuclease V [Escherichia coli 2.3916]
gi|386233736|gb|EII65716.1| deoxyribonuclease V [Escherichia coli 2.4168]
gi|386237816|gb|EII74757.1| deoxyribonuclease V [Escherichia coli 3.2303]
gi|386246957|gb|EII88687.1| deoxyribonuclease V [Escherichia coli 3003]
gi|386248634|gb|EII94806.1| deoxyribonuclease V [Escherichia coli TW07793]
gi|386252018|gb|EIJ01710.1| deoxyribonuclease V [Escherichia coli B41]
gi|386259431|gb|EIJ14905.1| deoxyribonuclease V [Escherichia coli 900105 (10e)]
gi|386798678|gb|AFJ31712.1| endonuclease V [Escherichia coli Xuzhou21]
gi|388337638|gb|EIL04136.1| endonuclease V [Escherichia coli O111:H11 str. CVM9534]
gi|388350722|gb|EIL16056.1| endonuclease V [Escherichia coli O111:H8 str. CVM9570]
gi|388355903|gb|EIL20718.1| endonuclease V [Escherichia coli O111:H8 str. CVM9574]
gi|388356957|gb|EIL21589.1| endonuclease V [Escherichia coli O111:H11 str. CVM9545]
gi|388368699|gb|EIL32323.1| endonuclease V [Escherichia coli O26:H11 str. CVM9942]
gi|388372447|gb|EIL35871.1| endonuclease V [Escherichia coli O26:H11 str. CVM10026]
gi|388382716|gb|EIL44562.1| endonuclease V [Escherichia coli KD1]
gi|388394124|gb|EIL55439.1| endonuclease V [Escherichia coli 541-15]
gi|388405882|gb|EIL66298.1| endonuclease V [Escherichia coli 75]
gi|388419881|gb|EIL79587.1| endonuclease V [Escherichia coli 576-1]
gi|388421460|gb|EIL81075.1| endonuclease V [Escherichia coli HM605]
gi|390636805|gb|EIN16376.1| endonuclease V [Escherichia coli FRIK1996]
gi|390636964|gb|EIN16524.1| endonuclease V [Escherichia coli FDA505]
gi|390637961|gb|EIN17490.1| endonuclease V [Escherichia coli FDA517]
gi|390655553|gb|EIN33480.1| endonuclease V [Escherichia coli FRIK1985]
gi|390656385|gb|EIN34265.1| endonuclease V [Escherichia coli 93-001]
gi|390658855|gb|EIN36638.1| endonuclease V [Escherichia coli FRIK1990]
gi|390673687|gb|EIN49914.1| endonuclease V [Escherichia coli PA3]
gi|390677014|gb|EIN53090.1| endonuclease V [Escherichia coli PA5]
gi|390680466|gb|EIN56310.1| endonuclease V [Escherichia coli PA9]
gi|390691566|gb|EIN66303.1| endonuclease V [Escherichia coli PA10]
gi|390695711|gb|EIN70223.1| endonuclease V [Escherichia coli PA14]
gi|390696950|gb|EIN71386.1| endonuclease V [Escherichia coli PA15]
gi|390710991|gb|EIN83984.1| endonuclease V [Escherichia coli PA22]
gi|390716510|gb|EIN89308.1| endonuclease V [Escherichia coli PA24]
gi|390717705|gb|EIN90482.1| endonuclease V [Escherichia coli PA25]
gi|390723819|gb|EIN96399.1| endonuclease V [Escherichia coli PA28]
gi|390736361|gb|EIO07698.1| endonuclease V [Escherichia coli PA31]
gi|390737105|gb|EIO08415.1| endonuclease V [Escherichia coli PA32]
gi|390740869|gb|EIO11984.1| endonuclease V [Escherichia coli PA33]
gi|390755291|gb|EIO24837.1| endonuclease V [Escherichia coli PA40]
gi|390757465|gb|EIO26944.1| endonuclease V [Escherichia coli PA39]
gi|390761529|gb|EIO30817.1| endonuclease V [Escherichia coli PA41]
gi|390764405|gb|EIO33615.1| endonuclease V [Escherichia coli PA42]
gi|390785192|gb|EIO52746.1| endonuclease V [Escherichia coli TW07945]
gi|390794381|gb|EIO61678.1| endonuclease V [Escherichia coli TW11039]
gi|390796674|gb|EIO63942.1| endonuclease V [Escherichia coli TW10246]
gi|390799628|gb|EIO66767.1| endonuclease V [Escherichia coli TW09098]
gi|390805486|gb|EIO72431.1| endonuclease V [Escherichia coli TW09109]
gi|390813295|gb|EIO79932.1| endonuclease V [Escherichia coli TW10119]
gi|390821056|gb|EIO87271.1| endonuclease V [Escherichia coli TW09195]
gi|390822147|gb|EIO88285.1| endonuclease V [Escherichia coli EC4203]
gi|390827203|gb|EIO92981.1| endonuclease V [Escherichia coli EC4196]
gi|390840381|gb|EIP04422.1| endonuclease V [Escherichia coli TW14313]
gi|390842371|gb|EIP06222.1| endonuclease V [Escherichia coli TW14301]
gi|390847388|gb|EIP10931.1| endonuclease V [Escherichia coli EC4421]
gi|390857872|gb|EIP20296.1| endonuclease V [Escherichia coli EC4422]
gi|390862273|gb|EIP24473.1| endonuclease V [Escherichia coli EC4013]
gi|390866220|gb|EIP28195.1| endonuclease V [Escherichia coli EC4402]
gi|390874616|gb|EIP35719.1| endonuclease V [Escherichia coli EC4439]
gi|390879964|gb|EIP40683.1| endonuclease V [Escherichia coli EC4436]
gi|390889876|gb|EIP49579.1| endonuclease V [Escherichia coli EC4437]
gi|390891009|gb|EIP50652.1| endonuclease V [Escherichia coli EC4448]
gi|390897393|gb|EIP56722.1| endonuclease V [Escherichia coli EC1738]
gi|390905477|gb|EIP64420.1| endonuclease V [Escherichia coli EC1734]
gi|390914703|gb|EIP73238.1| endonuclease V [Escherichia coli EC1845]
gi|390915469|gb|EIP73983.1| endonuclease V [Escherichia coli EC1863]
gi|391300809|gb|EIQ58713.1| endonuclease V [Escherichia coli EPECa12]
gi|391308997|gb|EIQ66682.1| endonuclease V [Escherichia coli EPEC C342-62]
gi|394384631|gb|EJE62188.1| endonuclease V [Escherichia coli O111:H8 str. CVM9634]
gi|394384922|gb|EJE62473.1| endonuclease V [Escherichia coli O26:H11 str. CVM10224]
gi|394384968|gb|EJE62517.1| endonuclease V [Escherichia coli O111:H8 str. CVM9602]
gi|394401188|gb|EJE77033.1| endonuclease V [Escherichia coli O26:H11 str. CVM10021]
gi|394401729|gb|EJE77508.1| endonuclease V [Escherichia coli O111:H11 str. CVM9553]
gi|394406032|gb|EJE81115.1| endonuclease V [Escherichia coli O111:H11 str. CVM9455]
gi|394417584|gb|EJE91308.1| endonuclease V [Escherichia coli O26:H11 str. CVM10030]
gi|394418922|gb|EJE92564.1| endonuclease V [Escherichia coli O26:H11 str. CVM9952]
gi|397782840|gb|EJK93706.1| endonuclease V [Escherichia coli STEC_O31]
gi|404289935|gb|EEH70520.2| endonuclease V [Escherichia sp. 1_1_43]
gi|406779980|gb|AFS59404.1| endonuclease V [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407056569|gb|AFS76620.1| endonuclease V [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063039|gb|AFS84086.1| endonuclease V [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408062692|gb|EKG97194.1| endonuclease V [Escherichia coli PA7]
gi|408063227|gb|EKG97723.1| endonuclease V [Escherichia coli FRIK920]
gi|408063621|gb|EKG98111.1| endonuclease V [Escherichia coli PA34]
gi|408074832|gb|EKH09085.1| endonuclease V [Escherichia coli FDA506]
gi|408079987|gb|EKH14088.1| endonuclease V [Escherichia coli FDA507]
gi|408088030|gb|EKH21425.1| endonuclease V [Escherichia coli FDA504]
gi|408094307|gb|EKH27343.1| endonuclease V [Escherichia coli FRIK1999]
gi|408100528|gb|EKH33027.1| endonuclease V [Escherichia coli FRIK1997]
gi|408105450|gb|EKH37618.1| endonuclease V [Escherichia coli NE1487]
gi|408112218|gb|EKH43887.1| endonuclease V [Escherichia coli NE037]
gi|408118356|gb|EKH49499.1| endonuclease V [Escherichia coli FRIK2001]
gi|408124643|gb|EKH55301.1| endonuclease V [Escherichia coli PA4]
gi|408134576|gb|EKH64400.1| endonuclease V [Escherichia coli PA23]
gi|408136216|gb|EKH65965.1| endonuclease V [Escherichia coli PA49]
gi|408143498|gb|EKH72795.1| endonuclease V [Escherichia coli PA45]
gi|408151774|gb|EKH80253.1| endonuclease V [Escherichia coli TT12B]
gi|408156940|gb|EKH85125.1| endonuclease V [Escherichia coli MA6]
gi|408161058|gb|EKH89041.1| endonuclease V [Escherichia coli 5905]
gi|408170024|gb|EKH97255.1| endonuclease V [Escherichia coli CB7326]
gi|408176754|gb|EKI03589.1| endonuclease V [Escherichia coli EC96038]
gi|408189332|gb|EKI15071.1| endonuclease V [Escherichia coli TW15901]
gi|408197010|gb|EKI22282.1| endonuclease V [Escherichia coli ARS4.2123]
gi|408197194|gb|EKI22460.1| endonuclease V [Escherichia coli TW00353]
gi|408208529|gb|EKI33174.1| endonuclease V [Escherichia coli 3006]
gi|408209856|gb|EKI34436.1| endonuclease V [Escherichia coli 07798]
gi|408209939|gb|EKI34514.1| endonuclease V [Escherichia coli PA38]
gi|408223305|gb|EKI47088.1| endonuclease V [Escherichia coli EC1735]
gi|408224317|gb|EKI48034.1| endonuclease V [Escherichia coli N1]
gi|408234479|gb|EKI57493.1| endonuclease V [Escherichia coli EC1736]
gi|408236959|gb|EKI59827.1| endonuclease V [Escherichia coli EC1737]
gi|408242640|gb|EKI65207.1| endonuclease V [Escherichia coli EC1846]
gi|408251484|gb|EKI73214.1| endonuclease V [Escherichia coli EC1847]
gi|408255894|gb|EKI77314.1| endonuclease V [Escherichia coli EC1848]
gi|408262576|gb|EKI83511.1| endonuclease V [Escherichia coli EC1849]
gi|408270770|gb|EKI90936.1| endonuclease V [Escherichia coli EC1850]
gi|408273733|gb|EKI93775.1| endonuclease V [Escherichia coli EC1856]
gi|408281876|gb|EKJ01244.1| endonuclease V [Escherichia coli EC1862]
gi|408287933|gb|EKJ06773.1| endonuclease V [Escherichia coli EC1864]
gi|408292823|gb|EKJ11316.1| endonuclease V [Escherichia coli EC1865]
gi|408302924|gb|EKJ20400.1| endonuclease V [Escherichia coli EC1868]
gi|408304079|gb|EKJ21517.1| endonuclease V [Escherichia coli EC1866]
gi|408315468|gb|EKJ31784.1| endonuclease V [Escherichia coli EC1869]
gi|408321073|gb|EKJ37124.1| endonuclease V [Escherichia coli EC1870]
gi|408322494|gb|EKJ38479.1| endonuclease V [Escherichia coli NE098]
gi|408333888|gb|EKJ48807.1| endonuclease V [Escherichia coli FRIK523]
gi|408340235|gb|EKJ54741.1| endonuclease V [Escherichia coli 0.1288]
gi|408341333|gb|EKJ55787.1| endonuclease V [Escherichia coli 0.1304]
gi|408456576|gb|EKJ80390.1| endonuclease V [Escherichia coli AD30]
gi|408544308|gb|EKK21766.1| endonuclease V [Escherichia coli 5.2239]
gi|408544570|gb|EKK22021.1| endonuclease V [Escherichia coli 3.4870]
gi|408545381|gb|EKK22816.1| endonuclease V [Escherichia coli 6.0172]
gi|408562597|gb|EKK38756.1| endonuclease V [Escherichia coli 8.0566]
gi|408562943|gb|EKK39090.1| endonuclease V [Escherichia coli 8.0586]
gi|408563807|gb|EKK39935.1| endonuclease V [Escherichia coli 8.0569]
gi|408575456|gb|EKK51126.1| endonuclease V [Escherichia coli 10.0833]
gi|408578144|gb|EKK53681.1| endonuclease V [Escherichia coli 8.2524]
gi|408588104|gb|EKK62705.1| endonuclease V [Escherichia coli 10.0869]
gi|408593029|gb|EKK67370.1| endonuclease V [Escherichia coli 88.0221]
gi|408598650|gb|EKK72602.1| endonuclease V [Escherichia coli 8.0416]
gi|408608248|gb|EKK81649.1| endonuclease V [Escherichia coli 10.0821]
gi|421934515|gb|EKT92279.1| endonuclease V [Escherichia coli O111:H11 str. CFSAN001630]
gi|421943590|gb|EKU00872.1| endonuclease V [Escherichia coli O26:H11 str. CFSAN001629]
gi|421945843|gb|EKU03028.1| endonuclease V [Escherichia coli O111:H8 str. CFSAN001632]
gi|427201017|gb|EKV71423.1| endonuclease V [Escherichia coli 88.1042]
gi|427201064|gb|EKV71464.1| endonuclease V [Escherichia coli 89.0511]
gi|427204134|gb|EKV74420.1| endonuclease V [Escherichia coli 88.1467]
gi|427217150|gb|EKV86222.1| endonuclease V [Escherichia coli 90.0091]
gi|427221040|gb|EKV89920.1| endonuclease V [Escherichia coli 90.2281]
gi|427223739|gb|EKV92469.1| endonuclease V [Escherichia coli 90.0039]
gi|427237439|gb|EKW04980.1| endonuclease V [Escherichia coli 93.0056]
gi|427237550|gb|EKW05084.1| endonuclease V [Escherichia coli 93.0055]
gi|427241812|gb|EKW09233.1| endonuclease V [Escherichia coli 94.0618]
gi|427255495|gb|EKW21759.1| endonuclease V [Escherichia coli 95.0183]
gi|427257032|gb|EKW23173.1| endonuclease V [Escherichia coli 95.0943]
gi|427257231|gb|EKW23363.1| endonuclease V [Escherichia coli 95.1288]
gi|427272802|gb|EKW37521.1| endonuclease V [Escherichia coli 96.0428]
gi|427274403|gb|EKW39061.1| endonuclease V [Escherichia coli 96.0427]
gi|427280125|gb|EKW44504.1| endonuclease V [Escherichia coli 96.0939]
gi|427288687|gb|EKW52302.1| endonuclease V [Escherichia coli 96.0932]
gi|427295577|gb|EKW58678.1| endonuclease V [Escherichia coli 96.0107]
gi|427296902|gb|EKW59947.1| endonuclease V [Escherichia coli 97.0003]
gi|427307225|gb|EKW69706.1| endonuclease V [Escherichia coli 97.1742]
gi|427310037|gb|EKW72308.1| endonuclease V [Escherichia coli 97.0007]
gi|427314901|gb|EKW76923.1| endonuclease V [Escherichia coli 99.0672]
gi|427324602|gb|EKW86070.1| endonuclease V [Escherichia coli 99.0678]
gi|427325613|gb|EKW87049.1| endonuclease V [Escherichia coli 99.0713]
gi|429250409|gb|EKY35069.1| endonuclease V [Escherichia coli 96.0109]
gi|429250906|gb|EKY35544.1| endonuclease V [Escherichia coli 97.0010]
gi|429354369|gb|EKY91069.1| endonuclease V [Escherichia coli O104:H4 str. 11-02030]
gi|429355274|gb|EKY91966.1| endonuclease V [Escherichia coli O104:H4 str. 11-02033-1]
gi|429356161|gb|EKY92842.1| endonuclease V [Escherichia coli O104:H4 str. 11-02092]
gi|429369884|gb|EKZ06455.1| endonuclease V [Escherichia coli O104:H4 str. 11-02093]
gi|429370581|gb|EKZ07146.1| endonuclease V [Escherichia coli O104:H4 str. 11-02281]
gi|429373188|gb|EKZ09736.1| endonuclease V [Escherichia coli O104:H4 str. 11-02318]
gi|429385985|gb|EKZ22436.1| endonuclease V [Escherichia coli O104:H4 str. 11-02913]
gi|429387930|gb|EKZ24359.1| endonuclease V [Escherichia coli O104:H4 str. 11-03439]
gi|429389840|gb|EKZ26258.1| endonuclease V [Escherichia coli O104:H4 str. 11-03943]
gi|429399113|gb|EKZ35436.1| endonuclease V [Escherichia coli O104:H4 str. 11-04080]
gi|429401319|gb|EKZ37625.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-9990]
gi|429404112|gb|EKZ40391.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-9450]
gi|429412499|gb|EKZ48694.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-4984]
gi|429414947|gb|EKZ51120.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-4986]
gi|429422497|gb|EKZ58614.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-4987]
gi|429426570|gb|EKZ62658.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-4988]
gi|429431540|gb|EKZ67588.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437847|gb|EKZ73844.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-5604]
gi|429441934|gb|EKZ77898.1| endonuclease V [Escherichia coli O104:H4 str. Ec12-0465]
gi|429447330|gb|EKZ83253.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-6006]
gi|429453970|gb|EKZ89837.1| endonuclease V [Escherichia coli O104:H4 str. Ec12-0466]
gi|429458344|gb|EKZ94171.1| endonuclease V [Escherichia coli O104:H4 str. Ec11-9941]
gi|430871693|gb|ELB95327.1| endonuclease V [Escherichia coli KTE2]
gi|430872458|gb|ELB96063.1| endonuclease V [Escherichia coli KTE4]
gi|430882771|gb|ELC05844.1| endonuclease V [Escherichia coli KTE5]
gi|430890541|gb|ELC13174.1| endonuclease V [Escherichia coli KTE10]
gi|430902716|gb|ELC24563.1| endonuclease V [Escherichia coli KTE15]
gi|430913048|gb|ELC34183.1| endonuclease V [Escherichia coli KTE21]
gi|430919686|gb|ELC40607.1| endonuclease V [Escherichia coli KTE25]
gi|430922153|gb|ELC42914.1| endonuclease V [Escherichia coli KTE26]
gi|430925736|gb|ELC46341.1| endonuclease V [Escherichia coli KTE28]
gi|430931705|gb|ELC52144.1| endonuclease V [Escherichia coli KTE39]
gi|430935569|gb|ELC55879.1| endonuclease V [Escherichia coli KTE44]
gi|430949832|gb|ELC69254.1| endonuclease V [Escherichia coli KTE181]
gi|430958208|gb|ELC76804.1| endonuclease V [Escherichia coli KTE187]
gi|430959312|gb|ELC77642.1| endonuclease V [Escherichia coli KTE188]
gi|430970372|gb|ELC87444.1| endonuclease V [Escherichia coli KTE191]
gi|430976428|gb|ELC93294.1| endonuclease V [Escherichia coli KTE193]
gi|430984859|gb|ELD01477.1| endonuclease V [Escherichia coli KTE204]
gi|430987356|gb|ELD03895.1| endonuclease V [Escherichia coli KTE201]
gi|430989792|gb|ELD06241.1| endonuclease V [Escherichia coli KTE205]
gi|430995117|gb|ELD11425.1| endonuclease V [Escherichia coli KTE206]
gi|431001266|gb|ELD16850.1| endonuclease V [Escherichia coli KTE208]
gi|431012142|gb|ELD26207.1| endonuclease V [Escherichia coli KTE210]
gi|431012880|gb|ELD26634.1| endonuclease V [Escherichia coli KTE212]
gi|431016437|gb|ELD29982.1| endonuclease V [Escherichia coli KTE213]
gi|431030168|gb|ELD43183.1| endonuclease V [Escherichia coli KTE214]
gi|431034485|gb|ELD46420.1| endonuclease V [Escherichia coli KTE220]
gi|431047004|gb|ELD57094.1| endonuclease V [Escherichia coli KTE230]
gi|431047117|gb|ELD57126.1| endonuclease V [Escherichia coli KTE228]
gi|431059466|gb|ELD68823.1| endonuclease V [Escherichia coli KTE233]
gi|431066160|gb|ELD74904.1| endonuclease V [Escherichia coli KTE235]
gi|431066368|gb|ELD75003.1| endonuclease V [Escherichia coli KTE234]
gi|431069645|gb|ELD77970.1| endonuclease V [Escherichia coli KTE236]
gi|431075240|gb|ELD82771.1| endonuclease V [Escherichia coli KTE237]
gi|431080050|gb|ELD86862.1| endonuclease V [Escherichia coli KTE47]
gi|431088941|gb|ELD94769.1| endonuclease V [Escherichia coli KTE51]
gi|431096381|gb|ELE01866.1| endonuclease V [Escherichia coli KTE53]
gi|431103729|gb|ELE08366.1| endonuclease V [Escherichia coli KTE55]
gi|431111191|gb|ELE15105.1| endonuclease V [Escherichia coli KTE56]
gi|431113756|gb|ELE17408.1| endonuclease V [Escherichia coli KTE57]
gi|431116585|gb|ELE20023.1| endonuclease V [Escherichia coli KTE58]
gi|431125081|gb|ELE27512.1| endonuclease V [Escherichia coli KTE60]
gi|431127164|gb|ELE29474.1| endonuclease V [Escherichia coli KTE62]
gi|431143624|gb|ELE45345.1| endonuclease V [Escherichia coli KTE67]
gi|431145735|gb|ELE47345.1| endonuclease V [Escherichia coli KTE72]
gi|431150242|gb|ELE51299.1| endonuclease V [Escherichia coli KTE75]
gi|431154700|gb|ELE55462.1| endonuclease V [Escherichia coli KTE76]
gi|431159437|gb|ELE59990.1| endonuclease V [Escherichia coli KTE77]
gi|431166570|gb|ELE66882.1| endonuclease V [Escherichia coli KTE80]
gi|431175723|gb|ELE75722.1| endonuclease V [Escherichia coli KTE81]
gi|431176593|gb|ELE76540.1| endonuclease V [Escherichia coli KTE83]
gi|431177241|gb|ELE77175.1| endonuclease V [Escherichia coli KTE86]
gi|431186305|gb|ELE85867.1| endonuclease V [Escherichia coli KTE87]
gi|431187074|gb|ELE86594.1| endonuclease V [Escherichia coli KTE93]
gi|431205188|gb|ELF03692.1| endonuclease V [Escherichia coli KTE111]
gi|431206051|gb|ELF04483.1| endonuclease V [Escherichia coli KTE116]
gi|431206963|gb|ELF05281.1| endonuclease V [Escherichia coli KTE119]
gi|431209276|gb|ELF07385.1| endonuclease V [Escherichia coli KTE142]
gi|431226834|gb|ELF23989.1| endonuclease V [Escherichia coli KTE156]
gi|431233880|gb|ELF29462.1| endonuclease V [Escherichia coli KTE161]
gi|431248577|gb|ELF42770.1| endonuclease V [Escherichia coli KTE171]
gi|431250982|gb|ELF45039.1| endonuclease V [Escherichia coli KTE8]
gi|431269404|gb|ELF60756.1| endonuclease V [Escherichia coli KTE9]
gi|431269797|gb|ELF61099.1| endonuclease V [Escherichia coli KTE17]
gi|431279699|gb|ELF70650.1| endonuclease V [Escherichia coli KTE45]
gi|431280805|gb|ELF71720.1| endonuclease V [Escherichia coli KTE23]
gi|431289147|gb|ELF79889.1| endonuclease V [Escherichia coli KTE42]
gi|431298980|gb|ELF88602.1| endonuclease V [Escherichia coli KTE22]
gi|431304307|gb|ELF92837.1| endonuclease V [Escherichia coli KTE46]
gi|431314999|gb|ELG02929.1| endonuclease V [Escherichia coli KTE48]
gi|431321627|gb|ELG09228.1| endonuclease V [Escherichia coli KTE50]
gi|431323191|gb|ELG10744.1| endonuclease V [Escherichia coli KTE54]
gi|431333893|gb|ELG21076.1| endonuclease V [Escherichia coli KTE63]
gi|431334633|gb|ELG21791.1| endonuclease V [Escherichia coli KTE65]
gi|431334668|gb|ELG21822.1| endonuclease V [Escherichia coli KTE78]
gi|431347398|gb|ELG34287.1| endonuclease V [Escherichia coli KTE79]
gi|431353275|gb|ELG40029.1| endonuclease V [Escherichia coli KTE84]
gi|431359439|gb|ELG46078.1| endonuclease V [Escherichia coli KTE115]
gi|431372273|gb|ELG57936.1| endonuclease V [Escherichia coli KTE118]
gi|431376931|gb|ELG62070.1| endonuclease V [Escherichia coli KTE123]
gi|431391728|gb|ELG75338.1| endonuclease V [Escherichia coli KTE141]
gi|431394159|gb|ELG77697.1| endonuclease V [Escherichia coli KTE140]
gi|431396302|gb|ELG79784.1| endonuclease V [Escherichia coli KTE144]
gi|431410727|gb|ELG93880.1| endonuclease V [Escherichia coli KTE146]
gi|431416534|gb|ELG99012.1| endonuclease V [Escherichia coli KTE154]
gi|431422932|gb|ELH05063.1| endonuclease V [Escherichia coli KTE158]
gi|431425835|gb|ELH07882.1| endonuclease V [Escherichia coli KTE194]
gi|431428986|gb|ELH10918.1| endonuclease V [Escherichia coli KTE165]
gi|431433092|gb|ELH14765.1| endonuclease V [Escherichia coli KTE192]
gi|431434243|gb|ELH15894.1| endonuclease V [Escherichia coli KTE190]
gi|431459257|gb|ELH39571.1| endonuclease V [Escherichia coli KTE183]
gi|431476632|gb|ELH56421.1| endonuclease V [Escherichia coli KTE197]
gi|431484810|gb|ELH64482.1| endonuclease V [Escherichia coli KTE209]
gi|431485300|gb|ELH64963.1| endonuclease V [Escherichia coli KTE202]
gi|431489607|gb|ELH69233.1| endonuclease V [Escherichia coli KTE207]
gi|431492858|gb|ELH72456.1| endonuclease V [Escherichia coli KTE215]
gi|431501466|gb|ELH80447.1| endonuclease V [Escherichia coli KTE217]
gi|431513226|gb|ELH91310.1| endonuclease V [Escherichia coli KTE218]
gi|431520080|gb|ELH97508.1| endonuclease V [Escherichia coli KTE223]
gi|431520385|gb|ELH97711.1| endonuclease V [Escherichia coli KTE229]
gi|431521007|gb|ELH98258.1| endonuclease V [Escherichia coli KTE227]
gi|431526015|gb|ELI02785.1| endonuclease V [Escherichia coli KTE105]
gi|431529517|gb|ELI06217.1| endonuclease V [Escherichia coli KTE106]
gi|431539107|gb|ELI15082.1| endonuclease V [Escherichia coli KTE109]
gi|431545172|gb|ELI19840.1| endonuclease V [Escherichia coli KTE112]
gi|431547455|gb|ELI21834.1| endonuclease V [Escherichia coli KTE113]
gi|431560953|gb|ELI34457.1| endonuclease V [Escherichia coli KTE120]
gi|431564586|gb|ELI37757.1| endonuclease V [Escherichia coli KTE122]
gi|431564906|gb|ELI38052.1| endonuclease V [Escherichia coli KTE124]
gi|431577270|gb|ELI49915.1| endonuclease V [Escherichia coli KTE125]
gi|431577801|gb|ELI50425.1| endonuclease V [Escherichia coli KTE128]
gi|431581462|gb|ELI53911.1| endonuclease V [Escherichia coli KTE129]
gi|431592463|gb|ELI63040.1| endonuclease V [Escherichia coli KTE131]
gi|431597016|gb|ELI66941.1| endonuclease V [Escherichia coli KTE133]
gi|431599724|gb|ELI69428.1| endonuclease V [Escherichia coli KTE137]
gi|431614726|gb|ELI83863.1| endonuclease V [Escherichia coli KTE145]
gi|431623471|gb|ELI92141.1| endonuclease V [Escherichia coli KTE150]
gi|431629580|gb|ELI97941.1| endonuclease V [Escherichia coli KTE153]
gi|431638029|gb|ELJ06077.1| endonuclease V [Escherichia coli KTE157]
gi|431639194|gb|ELJ07061.1| endonuclease V [Escherichia coli KTE160]
gi|431641397|gb|ELJ09138.1| endonuclease V [Escherichia coli KTE163]
gi|431652758|gb|ELJ19888.1| endonuclease V [Escherichia coli KTE166]
gi|431654412|gb|ELJ21468.1| endonuclease V [Escherichia coli KTE167]
gi|431666417|gb|ELJ33055.1| endonuclease V [Escherichia coli KTE174]
gi|431669084|gb|ELJ35519.1| endonuclease V [Escherichia coli KTE176]
gi|431672503|gb|ELJ38745.1| endonuclease V [Escherichia coli KTE177]
gi|431682548|gb|ELJ48311.1| endonuclease V [Escherichia coli KTE179]
gi|431682898|gb|ELJ48544.1| endonuclease V [Escherichia coli KTE180]
gi|431686536|gb|ELJ52101.1| endonuclease V [Escherichia coli KTE232]
gi|431697085|gb|ELJ62231.1| endonuclease V [Escherichia coli KTE82]
gi|431700776|gb|ELJ65706.1| endonuclease V [Escherichia coli KTE85]
gi|431700911|gb|ELJ65837.1| endonuclease V [Escherichia coli KTE88]
gi|431714870|gb|ELJ79045.1| endonuclease V [Escherichia coli KTE95]
gi|431715996|gb|ELJ80138.1| endonuclease V [Escherichia coli KTE94]
gi|431727652|gb|ELJ91399.1| endonuclease V [Escherichia coli KTE97]
gi|431730728|gb|ELJ94288.1| endonuclease V [Escherichia coli KTE99]
gi|432345609|gb|ELL40110.1| endonuclease V [Escherichia coli J96]
gi|441609879|emb|CCP94624.1| Endonuclease V [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
gi|441651854|emb|CCQ02569.1| Endonuclease V [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
gi|441711358|emb|CCQ08153.1| Endonuclease V [Escherichia coli Nissle 1917]
gi|443419988|gb|AGC84892.1| endonuclease V [Escherichia coli APEC O78]
gi|444534683|gb|ELV14887.1| endonuclease V [Escherichia coli 99.0814]
gi|444535896|gb|ELV15945.1| endonuclease V [Escherichia coli 09BKT078844]
gi|444545011|gb|ELV23975.1| endonuclease V [Escherichia coli 99.0815]
gi|444553888|gb|ELV31480.1| endonuclease V [Escherichia coli 99.0816]
gi|444555383|gb|ELV32852.1| endonuclease V [Escherichia coli 99.0839]
gi|444558957|gb|ELV36216.1| endonuclease V [Escherichia coli 99.0848]
gi|444568520|gb|ELV45193.1| endonuclease V [Escherichia coli 99.1753]
gi|444571715|gb|ELV48184.1| endonuclease V [Escherichia coli 99.1775]
gi|444575222|gb|ELV51471.1| endonuclease V [Escherichia coli 99.1793]
gi|444587579|gb|ELV63008.1| endonuclease V [Escherichia coli 99.1805]
gi|444588598|gb|ELV63970.1| endonuclease V [Escherichia coli ATCC 700728]
gi|444588909|gb|ELV64268.1| endonuclease V [Escherichia coli PA11]
gi|444602801|gb|ELV77531.1| endonuclease V [Escherichia coli PA13]
gi|444602830|gb|ELV77559.1| endonuclease V [Escherichia coli PA19]
gi|444611981|gb|ELV86292.1| endonuclease V [Escherichia coli PA2]
gi|444618332|gb|ELV92418.1| endonuclease V [Escherichia coli PA47]
gi|444619774|gb|ELV93800.1| endonuclease V [Escherichia coli PA48]
gi|444626056|gb|ELV99862.1| endonuclease V [Escherichia coli PA8]
gi|444634744|gb|ELW08199.1| endonuclease V [Escherichia coli 7.1982]
gi|444636477|gb|ELW09874.1| endonuclease V [Escherichia coli 99.1781]
gi|444641647|gb|ELW14875.1| endonuclease V [Escherichia coli 99.1762]
gi|444650927|gb|ELW23740.1| endonuclease V [Escherichia coli PA35]
gi|444656706|gb|ELW29226.1| endonuclease V [Escherichia coli 3.4880]
gi|444658739|gb|ELW31177.1| endonuclease V [Escherichia coli 95.0083]
gi|444666364|gb|ELW38438.1| endonuclease V [Escherichia coli 99.0670]
gi|449313680|gb|EMD03879.1| endonuclease V [Escherichia coli S17]
gi|449315664|gb|EMD05802.1| endonuclease V [Escherichia coli SEPT362]
Length = 223
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|417746343|ref|ZP_12394853.1| endonuclease V [Shigella flexneri 2930-71]
gi|332762823|gb|EGJ93082.1| endonuclease V [Shigella flexneri 2930-71]
Length = 223
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + + +L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMALLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L +K + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSKPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|419235202|ref|ZP_13777962.1| endonuclease V [Escherichia coli DEC9B]
gi|419240561|ref|ZP_13783260.1| endonuclease V [Escherichia coli DEC9C]
gi|378072512|gb|EHW34570.1| endonuclease V [Escherichia coli DEC9B]
gi|378078304|gb|EHW40293.1| endonuclease V [Escherichia coli DEC9C]
Length = 223
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|417829760|ref|ZP_12476304.1| endonuclease V [Shigella flexneri J1713]
gi|420322462|ref|ZP_14824283.1| endonuclease V [Shigella flexneri 2850-71]
gi|335573706|gb|EGM60048.1| endonuclease V [Shigella flexneri J1713]
gi|391245403|gb|EIQ04672.1| endonuclease V [Shigella flexneri 2850-71]
Length = 223
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|295704775|ref|YP_003597850.1| endonuclease V [Bacillus megaterium DSM 319]
gi|294802434|gb|ADF39500.1| Endonuclease V [Bacillus megaterium DSM 319]
Length = 239
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 18/209 (8%)
Query: 98 GGVDMSFSKEDPSIACGC-IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
GVD+++ +E+ C IVV+D QT ++ + +S+ + VPY+PGFLAFRE P++L
Sbjct: 43 AGVDVAYWEENGVSYGACSIVVVDYQTKNVMEKVHSVGEVTVPYLPGFLAFRELPLILEA 102
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
++ P V + DGNG LH G+A+H N T+G+GK+ + G H
Sbjct: 103 AKKLQVE-----PDVFLFDGNGYLHYEHMGVATHASFFLNKPTVGIGKSYLKIKG--HDY 155
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA--VMIVK 274
V + + EDI+ +G +R T +KPIF+S G+ I LD + +M+
Sbjct: 156 V--MPEDTAGAYEDIVI----DDEVYGRVVR-TAKGVKPIFLSCGNYIDLDMSYQLMMHF 208
Query: 275 MTCKYRVPEPIRQADIRSRDYLQKH-QST 302
++ + ++P P+R AD+ + + +++ QST
Sbjct: 209 ISKESKLPIPVRLADLHTHELRKRYRQST 237
>gi|432781175|ref|ZP_20015388.1| endonuclease V [Escherichia coli KTE59]
gi|431323639|gb|ELG11116.1| endonuclease V [Escherichia coli KTE59]
Length = 223
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|331675484|ref|ZP_08376233.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli TA280]
gi|331067362|gb|EGI38768.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli TA280]
Length = 225
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 33 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 91
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 92 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 139
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 140 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 194
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 195 MKGYRLPEPTRWAD 208
>gi|331644734|ref|ZP_08345852.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli H736]
gi|418040110|ref|ZP_12678361.1| endonuclease V [Escherichia coli W26]
gi|418960122|ref|ZP_13512016.1| DNase V [Escherichia coli J53]
gi|427807190|ref|ZP_18974257.1| endonuclease V (deoxyinosine 3'endoduclease) [Escherichia coli
chi7122]
gi|427811789|ref|ZP_18978854.1| endonuclease V (deoxyinosine 3'endoduclease) [Escherichia coli]
gi|409792|gb|AAC43096.1| ORF_o225 [Escherichia coli str. K-12 substr. MG1655]
gi|331036034|gb|EGI08271.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli H736]
gi|383476955|gb|EID68883.1| endonuclease V [Escherichia coli W26]
gi|384377092|gb|EIE34989.1| DNase V [Escherichia coli J53]
gi|412965372|emb|CCK49305.1| endonuclease V (deoxyinosine 3'endoduclease) [Escherichia coli
chi7122]
gi|412971968|emb|CCJ46638.1| endonuclease V (deoxyinosine 3'endoduclease) [Escherichia coli]
Length = 225
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 33 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 91
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 92 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 139
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 140 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 194
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 195 MKGYRLPEPTRWAD 208
>gi|366163129|ref|ZP_09462884.1| endonuclease V [Acetivibrio cellulolyticus CD2]
Length = 147
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 93/162 (57%), Gaps = 18/162 (11%)
Query: 141 VPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTI 200
+PG +FRE P + L N+K + P +++ DG G+ HPR FGLASH+G+L ++ TI
Sbjct: 1 MPGLFSFRELPSIAKALGNLKTK-----PDLIVCDGQGIAHPRRFGLASHLGILFDIPTI 55
Query: 201 GVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISV 260
G GK + G T D D +PL+ +G G +R T D +KP+++S+
Sbjct: 56 GCGKT--RLLGQT--------DEPGMKKGDYMPLI-DNGEIIGNTLR-TQDNIKPVYVSI 103
Query: 261 GHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
GH ISL TA +++++ +YR+PE RQAD R L ++ S
Sbjct: 104 GHSISLQTACEWVLRLSPQYRLPETTRQADHAVRMALAEYNS 145
>gi|148270066|ref|YP_001244526.1| deoxyribonuclease V [Thermotoga petrophila RKU-1]
gi|166233962|sp|A5IL77.1|NFI_THEP1 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|147735610|gb|ABQ46950.1| Endonuclease V [Thermotoga petrophila RKU-1]
Length = 225
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 40/235 (17%)
Query: 74 WNLPNSTTTNTSTKEEEEVLL-------KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI 126
W+LP + +++ L +Y+ GVD+SF ++ +A IVVL+ + +I
Sbjct: 9 WDLPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVDLSFPGKEEGLAV--IVVLEYPSFKI 66
Query: 127 VYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFG 186
+ + PY+PG LAFRE P+ L + ++ + P V++ DG GL HPR G
Sbjct: 67 LEVVSERGEITFPYIPGLLAFREGPLFLKAWEKLRTK-----PDVVVFDGQGLAHPRKLG 121
Query: 187 LASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE------NNNEDIIPLMGGSGS 240
+ASH+G+ + TIGV K+ + G ++ + K + E+II
Sbjct: 122 IASHMGLFIEIPTIGVAKSRLY-------GTFKMPEDKRCSWSYLYDGEEII-------- 166
Query: 241 TWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQADIRSR 293
G +R T + PIF+S GH + ++++ ++K R+PEP R A I ++
Sbjct: 167 --GCVIR-TKEGSAPIFVSPGHLMDIESSKRLIKAFTLPGRRIPEPTRLAHIYTQ 218
>gi|82778826|ref|YP_405175.1| endonuclease V [Shigella dysenteriae Sd197]
gi|309783954|ref|ZP_07678599.1| endonuclease V [Shigella dysenteriae 1617]
gi|123561317|sp|Q32AH1.1|NFI_SHIDS RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|81242974|gb|ABB63684.1| endonuclease V [Shigella dysenteriae Sd197]
gi|308928325|gb|EFP73787.1| endonuclease V [Shigella dysenteriae 1617]
Length = 223
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLPSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|417714452|ref|ZP_12363406.1| endonuclease V [Shigella flexneri K-272]
gi|417719320|ref|ZP_12368206.1| endonuclease V [Shigella flexneri K-227]
gi|332998854|gb|EGK18449.1| endonuclease V [Shigella flexneri K-272]
gi|333014314|gb|EGK33668.1| endonuclease V [Shigella flexneri K-227]
Length = 223
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|332282924|ref|ZP_08395337.1| endonuclease V [Shigella sp. D9]
gi|332105276|gb|EGJ08622.1| endonuclease V [Shigella sp. D9]
Length = 225
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 33 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 91
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 92 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 139
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 140 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 194
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 195 MKGYRLPEPTRWAD 208
>gi|72161804|ref|YP_289461.1| endonuclease V [Thermobifida fusca YX]
gi|71915536|gb|AAZ55438.1| Endonuclease V [Thermobifida fusca YX]
Length = 231
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 21/204 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + G+D+S+ P+ VV+D TL++ + PYVPG AFRE P L
Sbjct: 42 VRLVAGLDVSYG---PTELVAAAVVVDAATLEVTAQATVRATPTFPYVPGLFAFRELPPL 98
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L+ + P V + DG GL HPR FGLA H+GVL + GV K D
Sbjct: 99 LAALEQLP-----VEPDVYLCDGYGLAHPRRFGLACHLGVLVDRPVFGVAKTAFVGDA-A 152
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G R+ + D++ G G +R D +KP+++SVGH + LD+A ++
Sbjct: 153 EPGPRR------GSATDLV----DRGEVVGRCLRVH-DGVKPVYVSVGHRVDLDSACELV 201
Query: 273 VKMTCKYRVPEPIRQADIRSRDYL 296
++++ +YR+ EPIR+AD SR L
Sbjct: 202 LRLSPRYRICEPIRRADQLSRREL 225
>gi|383192004|ref|YP_005202132.1| deoxyinosine 3'endonuclease [Rahnella aquatilis CIP 78.65 = ATCC
33071]
gi|371590262|gb|AEX53992.1| deoxyinosine 3'endonuclease (endonuclease V) [Rahnella aquatilis
CIP 78.65 = ATCC 33071]
Length = 226
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I GVD+ F ++ + + VL TL++V + + +PY+PGFL+FRE P LL
Sbjct: 32 IAGVDVGF-EQGGEVTRAAVAVLRYPTLELVEYQIARIPTVMPYIPGFLSFRELPALLQA 90
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ +P ++ VDG G+ HPR G+ASH G++ ++ TIGV K+ L
Sbjct: 91 WQQLSS-----HPDLVFVDGQGIAHPRRLGVASHFGLMIDVPTIGVAKSRLCGRFLPLGD 145
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
A +E I G W +R P+FIS G+ IS+D+++ V+
Sbjct: 146 ELHSRQALYEGDEQI-------GWVWRSKLRC-----NPLFISPGNRISMDSSLYWVEQC 193
Query: 277 CK-YRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
+ YR+PEP R AD + + QRWQ
Sbjct: 194 IRQYRLPEPTRWADAVA-------SNRAAFQRWQ 220
>gi|432604821|ref|ZP_19841045.1| endonuclease V [Escherichia coli KTE66]
gi|431135979|gb|ELE37852.1| endonuclease V [Escherichia coli KTE66]
Length = 223
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGELLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|37523812|ref|NP_927189.1| endonuclease V [Gloeobacter violaceus PCC 7421]
gi|56404394|sp|Q7NDJ2.1|NFI_GLOVI RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|35214817|dbj|BAC92184.1| endonuclease V [Gloeobacter violaceus PCC 7421]
Length = 246
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 22/199 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVL-DLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
++ + GVD+SF+ +P +VV+ L++V + PY+PG L+FREAP
Sbjct: 43 VQRVAGVDVSFNPREPKALVHAVVVVLSYPGLEVVDRQAVSAAVDFPYIPGLLSFREAPP 102
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVD 210
+L+ + + ++ P +++VDG+G HPR G+ASH+G+ +L TIG K++ D
Sbjct: 103 ILAAIGQLSQK-----PDLVIVDGHGYAHPRRLGIASHLGLFLDLPTIGCAKSILVGRAD 157
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G L D + G G A+R T ++P+++S GH + LD+AV
Sbjct: 158 GDLAEAAGSLTD------------LLWRGEVVGRAVR-TRSRVQPVYVSPGHRLGLDSAV 204
Query: 271 MIVKMTCK-YRVPEPIRQA 288
V C+ YR+PEP RQA
Sbjct: 205 EWVLRCCRGYRLPEPTRQA 223
>gi|386620958|ref|YP_006140538.1| Endonuclease V [Escherichia coli NA114]
gi|387831905|ref|YP_003351842.1| endonuclease V [Escherichia coli SE15]
gi|432424413|ref|ZP_19666946.1| endonuclease V [Escherichia coli KTE178]
gi|432502573|ref|ZP_19744319.1| endonuclease V [Escherichia coli KTE216]
gi|432561319|ref|ZP_19797968.1| endonuclease V [Escherichia coli KTE49]
gi|432696881|ref|ZP_19932069.1| endonuclease V [Escherichia coli KTE162]
gi|432708402|ref|ZP_19943475.1| endonuclease V [Escherichia coli KTE6]
gi|432923304|ref|ZP_20125990.1| endonuclease V [Escherichia coli KTE173]
gi|432923437|ref|ZP_20126020.1| endonuclease V [Escherichia coli KTE175]
gi|432983543|ref|ZP_20172289.1| endonuclease V [Escherichia coli KTE211]
gi|433098851|ref|ZP_20285010.1| endonuclease V [Escherichia coli KTE139]
gi|433108281|ref|ZP_20294233.1| endonuclease V [Escherichia coli KTE148]
gi|281181062|dbj|BAI57392.1| endonuclease V [Escherichia coli SE15]
gi|333971459|gb|AEG38264.1| Endonuclease V [Escherichia coli NA114]
gi|430940959|gb|ELC61119.1| endonuclease V [Escherichia coli KTE178]
gi|431025375|gb|ELD38483.1| endonuclease V [Escherichia coli KTE216]
gi|431088042|gb|ELD93952.1| endonuclease V [Escherichia coli KTE49]
gi|431229609|gb|ELF26248.1| endonuclease V [Escherichia coli KTE162]
gi|431254330|gb|ELF47605.1| endonuclease V [Escherichia coli KTE6]
gi|431433795|gb|ELH15450.1| endonuclease V [Escherichia coli KTE173]
gi|431451904|gb|ELH32360.1| endonuclease V [Escherichia coli KTE175]
gi|431486649|gb|ELH66298.1| endonuclease V [Escherichia coli KTE211]
gi|431611653|gb|ELI80928.1| endonuclease V [Escherichia coli KTE139]
gi|431622951|gb|ELI91635.1| endonuclease V [Escherichia coli KTE148]
Length = 223
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALEWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|432443613|ref|ZP_19685934.1| endonuclease V [Escherichia coli KTE189]
gi|433016345|ref|ZP_20204664.1| endonuclease V [Escherichia coli KTE104]
gi|430960211|gb|ELC78367.1| endonuclease V [Escherichia coli KTE189]
gi|431525486|gb|ELI02277.1| endonuclease V [Escherichia coli KTE104]
Length = 223
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYLSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|15644608|ref|NP_229661.1| endonuclease V [Thermotoga maritima MSB8]
gi|418045928|ref|ZP_12684023.1| Deoxyribonuclease V [Thermotoga maritima MSB8]
gi|56404428|sp|Q9X2H9.1|NFI_THEMA RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|221046489|pdb|2W35|A Chain A, Structures Of Endonuclease V With Dna Reveal Initiation Of
Deaminated Adenine Repair
gi|221046490|pdb|2W35|B Chain B, Structures Of Endonuclease V With Dna Reveal Initiation Of
Deaminated Adenine Repair
gi|4982450|gb|AAD36927.1|AE001823_9 endonuclease V [Thermotoga maritima MSB8]
gi|351676813|gb|EHA59966.1| Deoxyribonuclease V [Thermotoga maritima MSB8]
Length = 225
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 116/235 (49%), Gaps = 40/235 (17%)
Query: 74 WNLPNSTTTNTSTKEEEEVLL-------KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI 126
W+LP + +++ L +Y+ GVD+SF ++ +A IVVL+ + +I
Sbjct: 9 WDLPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVDLSFPGKEEGLAV--IVVLEYPSFKI 66
Query: 127 VYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFG 186
+ + PY+PG LAFRE P+ L + ++ + P V++ DG GL HPR G
Sbjct: 67 LEVVSERGEITFPYIPGLLAFREGPLFLKAWEKLRTK-----PDVVVFDGQGLAHPRKLG 121
Query: 187 LASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE------NNNEDIIPLMGGSGS 240
+ASH+G+ + TIGV K+ + G ++ + K + E+II
Sbjct: 122 IASHMGLFIEIPTIGVAKSRLY-------GTFKMPEDKRCSWSYLYDGEEII-------- 166
Query: 241 TWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQADIRSR 293
G +R T + PIF+S GH + ++++ ++K R+PEP R A I ++
Sbjct: 167 --GCVIR-TKEGSAPIFVSPGHLMDVESSKRLIKAFTLPGRRIPEPTRLAHIYTQ 218
>gi|420338208|ref|ZP_14839766.1| endonuclease V [Shigella flexneri K-315]
gi|391258584|gb|EIQ17677.1| endonuclease V [Shigella flexneri K-315]
Length = 223
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATAMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|374300998|ref|YP_005052637.1| Endonuclease V [Desulfovibrio africanus str. Walvis Bay]
gi|332553934|gb|EGJ50978.1| Endonuclease V [Desulfovibrio africanus str. Walvis Bay]
Length = 256
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 48/266 (18%)
Query: 28 SYMENYCEEEREALASPDPAAQAQLNQW-TEIQDELKKRLITEDFFTWNLPNSTTTNTST 86
+Y++ E R AL+ P+P W T I+D R + E
Sbjct: 2 AYVDGMSELARNALSLPEP--------WPTTIED---ARAVQERM----------RGLVR 40
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
E L K + G+D+ ++ + + VLD L +V ++ PYVPGFL+
Sbjct: 41 LEPLADLPKLVAGIDVGLLQD--GLVRAAVAVLDFPALTLVESALAIQPAAFPYVPGFLS 98
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P +L L + P +L+ DG G+ HPRGFG+ASH+GVL L ++GV K+
Sbjct: 99 FREIPPVLEALGKLNA-----LPGLLVCDGQGIAHPRGFGIASHLGVLTGLPSLGVAKSR 153
Query: 207 ---HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHC 263
+ + + G R L + W + R+ +KP+F+S GH
Sbjct: 154 LVGRYAEPGSERGSRSPLVYRSRQ------------VGWVLRTRT---GVKPVFVSPGHR 198
Query: 264 ISLDTAV-MIVKMTCKYRVPEPIRQA 288
+ L ++ + + + KYR+PE RQA
Sbjct: 199 LDLYGSLELAMALAPKYRLPETTRQA 224
>gi|419280790|ref|ZP_13823024.1| endonuclease V [Escherichia coli DEC10E]
gi|419378192|ref|ZP_13919202.1| endonuclease V [Escherichia coli DEC14B]
gi|419383583|ref|ZP_13924517.1| endonuclease V [Escherichia coli DEC14C]
gi|419388834|ref|ZP_13929690.1| endonuclease V [Escherichia coli DEC14D]
gi|378122880|gb|EHW84306.1| endonuclease V [Escherichia coli DEC10E]
gi|378213475|gb|EHX73788.1| endonuclease V [Escherichia coli DEC14B]
gi|378223479|gb|EHX83701.1| endonuclease V [Escherichia coli DEC14C]
gi|378226216|gb|EHX86405.1| endonuclease V [Escherichia coli DEC14D]
Length = 223
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 IKGYRLPEPTRWAD 206
>gi|157155667|ref|YP_001465493.1| endonuclease V [Escherichia coli E24377A]
gi|157163467|ref|YP_001460785.1| endonuclease V [Escherichia coli HS]
gi|161984805|ref|YP_410287.2| endonuclease V [Shigella boydii Sb227]
gi|187733118|ref|YP_001882684.1| endonuclease V [Shigella boydii CDC 3083-94]
gi|209921477|ref|YP_002295561.1| endonuclease V [Escherichia coli SE11]
gi|300819810|ref|ZP_07099997.1| deoxyribonuclease V [Escherichia coli MS 107-1]
gi|300824621|ref|ZP_07104729.1| deoxyribonuclease V [Escherichia coli MS 119-7]
gi|300925867|ref|ZP_07141710.1| deoxyribonuclease V [Escherichia coli MS 182-1]
gi|301325706|ref|ZP_07219165.1| deoxyribonuclease V [Escherichia coli MS 78-1]
gi|307315029|ref|ZP_07594615.1| Deoxyribonuclease V [Escherichia coli W]
gi|378715052|ref|YP_005279945.1| Deoxyribonuclease V [Escherichia coli KO11FL]
gi|383181300|ref|YP_005459305.1| endonuclease V [Shigella sonnei 53G]
gi|386611406|ref|YP_006126892.1| endonuclease V [Escherichia coli W]
gi|386698979|ref|YP_006162816.1| endonuclease V [Escherichia coli KO11FL]
gi|386711947|ref|YP_006175668.1| endonuclease V [Escherichia coli W]
gi|414578880|ref|ZP_11436040.1| endonuclease V [Shigella sonnei 3233-85]
gi|415831823|ref|ZP_11517374.1| endonuclease V [Escherichia coli OK1357]
gi|415846643|ref|ZP_11525665.1| endonuclease V [Shigella sonnei 53G]
gi|415878678|ref|ZP_11544381.1| deoxyribonuclease V [Escherichia coli MS 79-10]
gi|416277358|ref|ZP_11644360.1| Endonuclease V [Shigella dysenteriae CDC 74-1112]
gi|416296404|ref|ZP_11651403.1| Endonuclease V [Shigella flexneri CDC 796-83]
gi|416344130|ref|ZP_11678030.1| Endonuclease V [Escherichia coli EC4100B]
gi|417127992|ref|ZP_11975333.1| deoxyribonuclease V [Escherichia coli 97.0246]
gi|417221346|ref|ZP_12024786.1| deoxyribonuclease V [Escherichia coli 96.154]
gi|417269956|ref|ZP_12057316.1| deoxyribonuclease V [Escherichia coli 3.3884]
gi|417599448|ref|ZP_12250068.1| endonuclease V [Escherichia coli 3030-1]
gi|417604916|ref|ZP_12255475.1| endonuclease V [Escherichia coli STEC_94C]
gi|417683264|ref|ZP_12332612.1| endonuclease V [Shigella boydii 3594-74]
gi|418270308|ref|ZP_12888300.1| endonuclease V [Shigella sonnei str. Moseley]
gi|419177695|ref|ZP_13721497.1| endonuclease V [Escherichia coli DEC7B]
gi|419347831|ref|ZP_13889193.1| endonuclease V [Escherichia coli DEC13A]
gi|419352293|ref|ZP_13893615.1| endonuclease V [Escherichia coli DEC13B]
gi|419357778|ref|ZP_13899018.1| endonuclease V [Escherichia coli DEC13C]
gi|419362740|ref|ZP_13903941.1| endonuclease V [Escherichia coli DEC13D]
gi|419367829|ref|ZP_13908970.1| endonuclease V [Escherichia coli DEC13E]
gi|419372644|ref|ZP_13913744.1| endonuclease V [Escherichia coli DEC14A]
gi|419866645|ref|ZP_14388998.1| endonuclease V [Escherichia coli O103:H25 str. CVM9340]
gi|419926570|ref|ZP_14444322.1| endonuclease V [Escherichia coli 541-1]
gi|419948583|ref|ZP_14464874.1| endonuclease V [Escherichia coli CUMT8]
gi|420327664|ref|ZP_14829404.1| endonuclease V [Shigella flexneri CCH060]
gi|420355621|ref|ZP_14856680.1| endonuclease V [Shigella boydii 4444-74]
gi|420356804|ref|ZP_14857827.1| endonuclease V [Shigella sonnei 3226-85]
gi|420366008|ref|ZP_14866863.1| endonuclease V [Shigella sonnei 4822-66]
gi|420382579|ref|ZP_14882013.1| endonuclease V [Shigella dysenteriae 225-75]
gi|421684632|ref|ZP_16124416.1| endonuclease V [Shigella flexneri 1485-80]
gi|422354687|ref|ZP_16435414.1| deoxyribonuclease V [Escherichia coli MS 117-3]
gi|422964115|ref|ZP_16973324.1| endonuclease V [Escherichia coli H494]
gi|423708309|ref|ZP_17682689.1| endonuclease V [Escherichia coli B799]
gi|432379236|ref|ZP_19622214.1| endonuclease V [Escherichia coli KTE12]
gi|432752451|ref|ZP_19987026.1| endonuclease V [Escherichia coli KTE29]
gi|432808242|ref|ZP_20042153.1| endonuclease V [Escherichia coli KTE91]
gi|432811744|ref|ZP_20045597.1| endonuclease V [Escherichia coli KTE101]
gi|432829612|ref|ZP_20063225.1| endonuclease V [Escherichia coli KTE135]
gi|432837052|ref|ZP_20070558.1| endonuclease V [Escherichia coli KTE136]
gi|432931793|ref|ZP_20131772.1| endonuclease V [Escherichia coli KTE184]
gi|432965763|ref|ZP_20154683.1| endonuclease V [Escherichia coli KTE203]
gi|433094397|ref|ZP_20280640.1| endonuclease V [Escherichia coli KTE138]
gi|433196060|ref|ZP_20380018.1| endonuclease V [Escherichia coli KTE90]
gi|450229164|ref|ZP_21897717.1| endonuclease V [Escherichia coli O08]
gi|167016287|sp|A7ZUL4.1|NFI_ECO24 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|167016288|sp|A8A798.1|NFI_ECOHS RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730055|sp|B6I5K9.1|NFI_ECOSE RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|226730070|sp|B2TWI5.1|NFI_SHIB3 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|157069147|gb|ABV08402.1| endonuclease V [Escherichia coli HS]
gi|157077697|gb|ABV17405.1| endonuclease V [Escherichia coli E24377A]
gi|187430110|gb|ACD09384.1| endonuclease V [Shigella boydii CDC 3083-94]
gi|209914736|dbj|BAG79810.1| endonuclease V [Escherichia coli SE11]
gi|300418057|gb|EFK01368.1| deoxyribonuclease V [Escherichia coli MS 182-1]
gi|300522870|gb|EFK43939.1| deoxyribonuclease V [Escherichia coli MS 119-7]
gi|300527631|gb|EFK48693.1| deoxyribonuclease V [Escherichia coli MS 107-1]
gi|300847495|gb|EFK75255.1| deoxyribonuclease V [Escherichia coli MS 78-1]
gi|306905534|gb|EFN36067.1| Deoxyribonuclease V [Escherichia coli W]
gi|315063323|gb|ADT77650.1| endonuclease V [Escherichia coli W]
gi|320172740|gb|EFW47974.1| Endonuclease V [Shigella dysenteriae CDC 74-1112]
gi|320185962|gb|EFW60710.1| Endonuclease V [Shigella flexneri CDC 796-83]
gi|320200162|gb|EFW74751.1| Endonuclease V [Escherichia coli EC4100B]
gi|323167468|gb|EFZ53176.1| endonuclease V [Shigella sonnei 53G]
gi|323182097|gb|EFZ67507.1| endonuclease V [Escherichia coli OK1357]
gi|323380613|gb|ADX52881.1| Deoxyribonuclease V [Escherichia coli KO11FL]
gi|324017349|gb|EGB86568.1| deoxyribonuclease V [Escherichia coli MS 117-3]
gi|332092325|gb|EGI97400.1| endonuclease V [Shigella boydii 3594-74]
gi|342927175|gb|EGU95897.1| deoxyribonuclease V [Escherichia coli MS 79-10]
gi|345346616|gb|EGW78939.1| endonuclease V [Escherichia coli STEC_94C]
gi|345347507|gb|EGW79813.1| endonuclease V [Escherichia coli 3030-1]
gi|371591554|gb|EHN80510.1| endonuclease V [Escherichia coli H494]
gi|378027616|gb|EHV90243.1| endonuclease V [Escherichia coli DEC7B]
gi|378181761|gb|EHX42425.1| endonuclease V [Escherichia coli DEC13A]
gi|378194848|gb|EHX55357.1| endonuclease V [Escherichia coli DEC13C]
gi|378195100|gb|EHX55605.1| endonuclease V [Escherichia coli DEC13B]
gi|378197320|gb|EHX57802.1| endonuclease V [Escherichia coli DEC13D]
gi|378207949|gb|EHX68335.1| endonuclease V [Escherichia coli DEC13E]
gi|378211777|gb|EHX72111.1| endonuclease V [Escherichia coli DEC14A]
gi|383390506|gb|AFH15464.1| endonuclease V [Escherichia coli KO11FL]
gi|383407639|gb|AFH13882.1| endonuclease V [Escherichia coli W]
gi|385708537|gb|EIG45547.1| endonuclease V [Escherichia coli B799]
gi|386143952|gb|EIG90420.1| deoxyribonuclease V [Escherichia coli 97.0246]
gi|386201148|gb|EII00139.1| deoxyribonuclease V [Escherichia coli 96.154]
gi|386228761|gb|EII56117.1| deoxyribonuclease V [Escherichia coli 3.3884]
gi|388334352|gb|EIL00948.1| endonuclease V [Escherichia coli O103:H25 str. CVM9340]
gi|388409216|gb|EIL69535.1| endonuclease V [Escherichia coli 541-1]
gi|388421077|gb|EIL80704.1| endonuclease V [Escherichia coli CUMT8]
gi|391246728|gb|EIQ05987.1| endonuclease V [Shigella flexneri CCH060]
gi|391271743|gb|EIQ30610.1| endonuclease V [Shigella boydii 4444-74]
gi|391280041|gb|EIQ38717.1| endonuclease V [Shigella sonnei 3233-85]
gi|391289963|gb|EIQ48445.1| endonuclease V [Shigella sonnei 3226-85]
gi|391291386|gb|EIQ49788.1| endonuclease V [Shigella sonnei 4822-66]
gi|391298393|gb|EIQ56402.1| endonuclease V [Shigella dysenteriae 225-75]
gi|397894631|gb|EJL11072.1| endonuclease V [Shigella sonnei str. Moseley]
gi|404335973|gb|EJZ62438.1| endonuclease V [Shigella flexneri 1485-80]
gi|430895078|gb|ELC17351.1| endonuclease V [Escherichia coli KTE12]
gi|431292719|gb|ELF83104.1| endonuclease V [Escherichia coli KTE29]
gi|431352411|gb|ELG39189.1| endonuclease V [Escherichia coli KTE91]
gi|431358819|gb|ELG45465.1| endonuclease V [Escherichia coli KTE101]
gi|431379926|gb|ELG64830.1| endonuclease V [Escherichia coli KTE136]
gi|431381925|gb|ELG66276.1| endonuclease V [Escherichia coli KTE135]
gi|431458979|gb|ELH39298.1| endonuclease V [Escherichia coli KTE184]
gi|431475124|gb|ELH54928.1| endonuclease V [Escherichia coli KTE203]
gi|431605927|gb|ELI75312.1| endonuclease V [Escherichia coli KTE138]
gi|431712401|gb|ELJ76697.1| endonuclease V [Escherichia coli KTE90]
gi|449313108|gb|EMD03334.1| endonuclease V [Escherichia coli O08]
Length = 223
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|448746913|ref|ZP_21728577.1| Endonuclease V [Halomonas titanicae BH1]
gi|445565423|gb|ELY21533.1| Endonuclease V [Halomonas titanicae BH1]
Length = 228
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 112/206 (54%), Gaps = 32/206 (15%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVL--------DLQTL-QIVYEDYSLLRLQVPYVPGF 144
+ +I GVD+ F +E I +VVL DL + Q+V+ + + ++PY+PG
Sbjct: 35 ITHIAGVDIGF-EEGGEITRAAVVVLKWDPATAPDLSVVEQVVHREPT----RMPYIPGL 89
Query: 145 LAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGK 204
L+FRE P L + + P+++MVDG G+ HPR G+A+H+G+ +L TIG+ K
Sbjct: 90 LSFREIPAALGAFEKLS-----VMPELVMVDGQGIAHPRRLGVAAHLGLWLDLPTIGIAK 144
Query: 205 NLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCI 264
+ + H+ V + D +PL G T G +RS +KP+++S GH I
Sbjct: 145 SRLYGQ---HAEVGE-------QRGDWVPLSAGQ-ETIGAVLRSR-TKVKPVYVSPGHRI 192
Query: 265 SLDTAVM-IVKMTCKYRVPEPIRQAD 289
+L+T++ +++ + ++PEP R AD
Sbjct: 193 TLETSLAWVLRCLGRTKLPEPTRLAD 218
>gi|385802610|ref|YP_005839010.1| endonuclease V (deoxyinosine 3'endonuclease) [Haloquadratum walsbyi
C23]
gi|339728102|emb|CCC39224.1| endonuclease V [Haloquadratum walsbyi C23]
Length = 281
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 114/229 (49%), Gaps = 18/229 (7%)
Query: 68 TEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIV 127
T+D + +ST+T + + + GVD +F E + ++ + +V
Sbjct: 51 TKDTTQKTIDSSTSTTDIPNQGADETQPLVAGVDQAFRTEQSEVISAIVLT---RGATVV 107
Query: 128 YEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGL 187
++ L +PY+PG L+FRE +L+ + + ++ P + M DG+G +H R GL
Sbjct: 108 DRVVAVTDLSIPYIPGLLSFREGGPILAAFEEISQK-----PDITMFDGSGRMHYRQAGL 162
Query: 188 ASHIGVLANLTTIGVGKNL-----HHVDGLTHSGVRQLLDAKEN-NNEDIIPLMGGSGST 241
A+HIGV+ ++ TIGV K+L +G + ++A E + D ++G + T
Sbjct: 163 ATHIGVVLDIPTIGVAKSLLCGTPESDTAQRPAGWQTQINADETVEDADTETVIGHALQT 222
Query: 242 WGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
R + P+++S GH +S TAV I + C Y++PEP R+AD
Sbjct: 223 RQYDSRK---IINPVYVSPGHRVSATTAVKITQALCDGYKLPEPTRRAD 268
>gi|359393640|ref|ZP_09186693.1| Endonuclease V [Halomonas boliviensis LC1]
gi|357970887|gb|EHJ93332.1| Endonuclease V [Halomonas boliviensis LC1]
Length = 228
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 111/209 (53%), Gaps = 38/209 (18%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVL--------DLQTL-QIVYEDYSLLRLQVPYVPGF 144
+ +I GVD+ F ++ I +VVL DL + Q+V+ + + ++PY+PG
Sbjct: 35 ITHIAGVDIGF-EDSGEITRAAVVVLKWDPATAPDLTVVEQVVHREPT----RMPYIPGL 89
Query: 145 LAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGK 204
L+FRE P L + + P+++MVDG G+ HPR G+A+H+G+ +L TIG+ K
Sbjct: 90 LSFREIPAALGAFEKLS-----VMPELVMVDGQGIAHPRRLGVAAHLGLWLDLPTIGIAK 144
Query: 205 NL---HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVG 261
+ HV+ G D +PL G T G +RS +KPI++S G
Sbjct: 145 SRLYGQHVEMGEQRG-------------DWVPLYAGQ-ETIGAVLRSR-TKVKPIYVSPG 189
Query: 262 HCISLDTAVM-IVKMTCKYRVPEPIRQAD 289
H I+L+T++ +++ + ++PEP R AD
Sbjct: 190 HRITLETSLAWVLRCLGRTKLPEPTRLAD 218
>gi|300938777|ref|ZP_07153490.1| deoxyribonuclease V [Escherichia coli MS 21-1]
gi|300456287|gb|EFK19780.1| deoxyribonuclease V [Escherichia coli MS 21-1]
Length = 223
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F K+ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-KQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ + ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQKLD-----LVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|57234654|ref|YP_181312.1| endonuclease V [Dehalococcoides ethenogenes 195]
gi|57225102|gb|AAW40159.1| endonuclease V [Dehalococcoides ethenogenes 195]
Length = 221
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ + G D+ S+ + +VVL +Q+V S PY+PG L+FRE P+L
Sbjct: 36 IHLVAGADVWHSRTS-GMGRAAVVVLSYPDMQLVEVSRSEGHCHFPYIPGLLSFREMPLL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
LS + ++ P ++++DG GL HPR G+ASH+G+ N IG K+
Sbjct: 95 LSAFEGLEN-----IPDLILMDGQGLAHPRRLGIASHLGLFLNKPVIGCAKS-------R 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G LD + D+ + G MR T + P+FISVGH I L+ A +V
Sbjct: 143 LIGEYTALDESAGSFSDLY----HNTELIGRVMR-TRQGVNPLFISVGHKICLEEACSMV 197
Query: 274 KMTCK-YRVPEPIRQADIRSRDYL 296
C+ YR+PEP RQA + + + +
Sbjct: 198 AECCRGYRLPEPTRQAHLAAAELI 221
>gi|358460702|ref|ZP_09170881.1| Endonuclease V [Frankia sp. CN3]
gi|357076065|gb|EHI85546.1| Endonuclease V [Frankia sp. CN3]
Length = 225
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 93 LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
L+ + G D+++ +A G +VVL + V + R PYVPG L+FRE P
Sbjct: 27 LVTTVAGFDVAYDTGSDLLA-GAVVVLAAPDWEAVASATVVGRAAFPYVPGLLSFRELPP 85
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
LL + + R P +L+ DG+G+ HPR FGLA H+GV NL T+GV K +
Sbjct: 86 LLDAWETVLPRLAA-PPDLLVCDGHGIAHPRRFGLACHLGVTLNLPTVGVAKTPFVGEHS 144
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
G R A + E + G A+R T D ++ +++SVGH +LD+A
Sbjct: 145 PPGGRRADRTAIMLDGEPV-----------GAALR-TRDGVREVYVSVGHRTNLDSACRW 192
Query: 273 VKMTC-KYRVPEPIRQADIRSR 293
V C YR+PE R AD SR
Sbjct: 193 VLELCPSYRLPETTRAADRLSR 214
>gi|331670852|ref|ZP_08371687.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli TA271]
gi|331680121|ref|ZP_08380782.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli H591]
gi|81247751|gb|ABB68459.1| endonuclease V [Shigella boydii Sb227]
gi|331061940|gb|EGI33864.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli TA271]
gi|331072276|gb|EGI43610.1| endonuclease V (Deoxyinosine 3'endonuclease)(Deoxyribonuclease V)
(DNase V) [Escherichia coli H591]
Length = 225
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 33 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 91
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 92 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RLCG 139
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 140 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 194
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 195 MKGYRLPEPTRWAD 208
>gi|338529928|ref|YP_004663262.1| endonuclease V [Myxococcus fulvus HW-1]
gi|337256024|gb|AEI62184.1| endonuclease V [Myxococcus fulvus HW-1]
Length = 233
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 35/228 (15%)
Query: 74 WNLPNSTTTNTSTKEEEEVLLK--------YIGGVDMSFSKEDPSIACGCIVVLDLQTLQ 125
W++ S + E+++L+ + G D+S K G +VVLD+ TL
Sbjct: 10 WDVTPSEAVALQRRLREQLVLRPPPGLKVERVAGADISTEKGK-DTGFGGLVVLDVATLA 68
Query: 126 IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGF 185
V + + L PYVPG L+FRE P++ + + + R P V++ DG G HPR
Sbjct: 69 PVARSGAAVTLHFPYVPGLLSFRELPIIAAAWERLTVR-----PDVVIFDGQGTAHPRRM 123
Query: 186 GLASHIGVLANLTTIGVGKNL----HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGST 241
G+A H G+L + +IG K+L H G T LL G
Sbjct: 124 GIACHGGLLFGVPSIGCAKSLLVGTHGPLGETRGATAPLLH---------------RGEV 168
Query: 242 WGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
G+A+R T ++P+++S GH + L TAV +++K++ KYR PE R A
Sbjct: 169 VGMAVR-TRKGVQPVYVSPGHLMDLPTAVDLVLKVSPKYREPETTRHA 215
>gi|333371575|ref|ZP_08463521.1| deoxyribonuclease V [Desmospora sp. 8437]
gi|332975899|gb|EGK12775.1| deoxyribonuclease V [Desmospora sp. 8437]
Length = 220
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 108/200 (54%), Gaps = 31/200 (15%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIV-YEDYSLLRLQVPYVPGFLAFREAPV 152
++ + GVD+++ ++ I + L +Q V ED ++ PY+PG +FRE P
Sbjct: 36 IETVAGVDVAYH----PVSDALIAAVTLHPVQSVRVED----QVHFPYIPGLFSFRELPP 87
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
++ + + R P +++ DG G+ HPR FGLASH+GVL ++ TIG GK
Sbjct: 88 IIKAMKKLTLR-----PNLIVCDGQGIAHPRRFGLASHLGVLFDVPTIGCGKT------- 135
Query: 213 THSGVRQLLDAKENNNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
R + A+E + D PL+ G +R T D +KP+ +S+GH ISL TA
Sbjct: 136 -----RLVGKAQEPGPKRGDFAPLL-DEDEVIGSLLR-TQDHIKPVCVSIGHRISLATAR 188
Query: 271 -MIVKMTCKYRVPEPIRQAD 289
I+K++ +YR+PE RQ+D
Sbjct: 189 DWILKLSPRYRLPETTRQSD 208
>gi|157147205|ref|YP_001454524.1| endonuclease V [Citrobacter koseri ATCC BAA-895]
gi|166233957|sp|A8AKS5.1|NFI_CITK8 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|157084410|gb|ABV14088.1| hypothetical protein CKO_02988 [Citrobacter koseri ATCC BAA-895]
Length = 223
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLTYPALELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 90 WEQLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMMDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L A+ + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 138 KFEPLSAEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 193 MQGYRLPEPTRWAD 206
>gi|375364053|ref|YP_005132092.1| deoxyribonuclease V [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|371570047|emb|CCF06897.1| deoxyribonuclease V [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
Length = 238
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 19/199 (9%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVCS-IIVIDADTTEVIEKVHSMGKISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDF- 155
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VK 274
++ + + DI+ G +G A+R+ D +KPIF+S GH I L+++ I +K
Sbjct: 156 ---EMPENEVGAYTDILI----DGEVYGRALRTRRD-VKPIFLSCGHNIDLESSYQITMK 207
Query: 275 MTCK-YRVPEPIRQADIRS 292
M + R+P P+R AD+ +
Sbjct: 208 MINRESRLPIPVRLADLET 226
>gi|154687731|ref|YP_001422892.1| hypothetical protein RBAM_033310 [Bacillus amyloliquefaciens FZB42]
gi|166233956|sp|A7Z9I5.1|NFI_BACA2 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|154353582|gb|ABS75661.1| YwqL [Bacillus amyloliquefaciens FZB42]
Length = 238
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 109/199 (54%), Gaps = 19/199 (9%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVCS-IIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAEKLEAE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDF- 155
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VK 274
++ + + DI+ G +G A+R+ D +KPIF+S GH I L+++ I +K
Sbjct: 156 ---EMPENEVGAYTDILI----DGEVYGRALRTRRD-VKPIFLSCGHNIDLESSYQITMK 207
Query: 275 MTCK-YRVPEPIRQADIRS 292
M + R+P P+R AD+ +
Sbjct: 208 MINRDSRLPIPVRLADLET 226
>gi|395235494|ref|ZP_10413704.1| endonuclease V [Enterobacter sp. Ag1]
gi|394729880|gb|EJF29807.1| endonuclease V [Enterobacter sp. Ag1]
Length = 223
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 100/196 (51%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ I G D+ F ++ + IV+L +L++V + + +PY+PGFL+FRE P LL
Sbjct: 29 RLIAGADVGF-EQGGDVTRAAIVLLSYPSLELVEYQVARIATTMPYIPGFLSFREYPALL 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 88 EAWGMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RL 135
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV- 273
G + L + + PLM G RS P+FIS GH ISLD A+ V
Sbjct: 136 CGKFEPLGDEPDARA---PLM-DKGEQLAWVWRSK-KRCNPLFISTGHRISLDGALKWVE 190
Query: 274 KMTCKYRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 191 RCMAGYRLPEPTRWAD 206
>gi|383621733|ref|ZP_09948139.1| endonuclease V [Halobiforma lacisalsi AJ5]
Length = 277
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 132/259 (50%), Gaps = 40/259 (15%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLP----------NSTTTNTSTKEE-EEVLLKYIGGVDM 102
+ +Q E+ + ED F ++ N+ ++ T E E + GVD
Sbjct: 18 EMERLQREIADAAVFEDDFPFDPAAITNPLEASANAAASDLETPEAAERADPPIVAGVDQ 77
Query: 103 SFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKK 162
SF +D +++ V+ + +++ +++ L++PYVPG LAFRE +L+ L+ +
Sbjct: 78 SFLDDDRALSA----VVATRAGEVIERVHAVTPLEIPYVPGLLAFREGGPILAALEELS- 132
Query: 163 RANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSG 216
P +L+ DG+G +H R G+A+HIGV+ ++ ++GV K+L + L +G
Sbjct: 133 ----VSPDILLFDGSGRIHFRQAGIATHIGVVRDVPSVGVAKSLLCGEPAAETENLP-AG 187
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAVM 271
R ++A + + G+ G A+++ +PD + P+++S GH + +TA
Sbjct: 188 TRVPIEADSSVD-------APDGTLLGYALQTRQYDSPDRYINPLYVSPGHRVGPETAAD 240
Query: 272 IVK-MTCKYRVPEPIRQAD 289
+V+ + Y++PEP+R AD
Sbjct: 241 VVEALATSYKLPEPVRLAD 259
>gi|432384924|ref|ZP_19627830.1| endonuclease V [Escherichia coli KTE16]
gi|432516401|ref|ZP_19753613.1| endonuclease V [Escherichia coli KTE224]
gi|432701527|ref|ZP_19936668.1| endonuclease V [Escherichia coli KTE169]
gi|432747986|ref|ZP_19982645.1| endonuclease V [Escherichia coli KTE43]
gi|433146653|ref|ZP_20331777.1| endonuclease V [Escherichia coli KTE168]
gi|430911651|gb|ELC32926.1| endonuclease V [Escherichia coli KTE16]
gi|431037493|gb|ELD48475.1| endonuclease V [Escherichia coli KTE224]
gi|431239297|gb|ELF33938.1| endonuclease V [Escherichia coli KTE169]
gi|431288981|gb|ELF79734.1| endonuclease V [Escherichia coli KTE43]
gi|431656550|gb|ELJ23531.1| endonuclease V [Escherichia coli KTE168]
Length = 223
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLFSEPGA---LAPLMD-KGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|301019421|ref|ZP_07183596.1| deoxyribonuclease V [Escherichia coli MS 69-1]
gi|419918884|ref|ZP_14437059.1| endonuclease V [Escherichia coli KD2]
gi|300399275|gb|EFJ82813.1| deoxyribonuclease V [Escherichia coli MS 69-1]
gi|388389097|gb|EIL50635.1| endonuclease V [Escherichia coli KD2]
Length = 223
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPLLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|58425676|gb|AAW74713.1| endonuclease V [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 290
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
+E + + G D+ F ++D V+LD TL + + +PYVPG L+F
Sbjct: 86 DEVSATPQLLAGFDVGF-EDDGQTTRAAAVLLDAHTLLPLETHVARAPTSMPYVPGLLSF 144
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE P LL L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 145 RELPALLQALARLSR-----TPDLVFIDGQGIAHPRRLGIAAHFGVVTGLPCIGIAKQ-R 198
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
G E + I L+GG+ W A+RS P P+ +S GHC+S+
Sbjct: 199 LAGSFAEPG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHCVSMQ 247
Query: 268 TAVMIVKMTCK-YRVPEPIRQAD 289
A+ T + YR+PEP R AD
Sbjct: 248 GALGWTLRTLRSYRLPEPTRLAD 270
>gi|418941798|ref|ZP_13495111.1| endonuclease V [Escherichia coli O157:H43 str. T22]
gi|375322888|gb|EHS68620.1| endonuclease V [Escherichia coli O157:H43 str. T22]
Length = 223
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G++ ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLMVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH + +DTA+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVGVDTALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|190573431|ref|YP_001971276.1| endonuclease V [Stenotrophomonas maltophilia K279a]
gi|190011353|emb|CAQ44968.1| putative endonuclease V [Stenotrophomonas maltophilia K279a]
Length = 224
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ G+D+ F +++ +I V+LD +TLQ V ++ + + +PY+PG L+FRE P L
Sbjct: 38 VRWLAGLDVGF-EDNGAITRAAAVLLDAKTLQPVAQEIARIPTVMPYIPGLLSFRELPAL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L + + P+++ VDG+G+ HPR G+A+H+GV+ +L +IGV K
Sbjct: 97 LAALALLPR-----TPELVFVDGHGISHPRRLGVAAHLGVVTDLPSIGVAK--------- 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
S + D PL+ G G +RS KP+F++ GH +S DTA+ V
Sbjct: 143 -SKLVGRFDEPGAEAGAHTPLLDGD-EQLGWVLRSKL-RCKPLFVAGGHRVSADTALDWV 199
Query: 274 KMTCK-YRVPEPIRQAD 289
+ T + YR+PEP R AD
Sbjct: 200 QRTLRGYRLPEPTRLAD 216
>gi|421729982|ref|ZP_16169111.1| deoxyribonuclease V [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|407075948|gb|EKE48932.1| deoxyribonuclease V [Bacillus amyloliquefaciens subsp. plantarum
M27]
Length = 238
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 19/199 (9%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVC-SIIVIDADTTEVIEKVHSMGKISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDF- 155
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VK 274
++ + + DI+ G +G A+R+ D +KPIF+S GH I L+++ I +K
Sbjct: 156 ---EMPENEVGAYTDILI----DGEVYGRALRTRRD-VKPIFLSCGHNIDLESSYQITMK 207
Query: 275 MTCK-YRVPEPIRQADIRS 292
M + R+P P+R AD+ +
Sbjct: 208 MINRESRLPIPVRLADLET 226
>gi|322834810|ref|YP_004214837.1| Deoxyribonuclease V [Rahnella sp. Y9602]
gi|384260031|ref|YP_005403965.1| endonuclease V [Rahnella aquatilis HX2]
gi|321170011|gb|ADW75710.1| Deoxyribonuclease V [Rahnella sp. Y9602]
gi|380756007|gb|AFE60398.1| endonuclease V [Rahnella aquatilis HX2]
Length = 226
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I GVD+ F ++ + + VL TL++V + + +PY+PGFL+FRE P LL
Sbjct: 32 IAGVDVGF-EQGGEVTRAAVAVLRYPTLELVEYQIARIPTVMPYIPGFLSFRELPALLQA 90
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ P ++ VDG G+ HPR G+ASH G++ ++ TIGV K+ L
Sbjct: 91 WQQLS-----LQPDLVFVDGQGIAHPRRLGVASHFGLMIDVPTIGVAKSRLCGQFLPLGD 145
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
A +E I G W +R P+FIS G+ IS+D++ V+
Sbjct: 146 ELHSRQALYEGDEQI-------GWVWRSKLRCN-----PLFISPGNRISMDSSFYWVEQC 193
Query: 277 CK-YRVPEPIRQADIRSRDYLQKHQSTCLLQRWQ 309
+ YR+PEP R AD + + QRWQ
Sbjct: 194 IRQYRLPEPTRWADAVA-------SNRAAFQRWQ 220
>gi|404492190|ref|YP_006716296.1| endodeoxyribonuclease V [Pelobacter carbinolicus DSM 2380]
gi|77544299|gb|ABA87861.1| endodeoxyribonuclease V [Pelobacter carbinolicus DSM 2380]
Length = 232
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 25/199 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ GVD+S+ + +VVL + L +V + + + PY+PG L+FRE PV+
Sbjct: 37 VRHVAGVDVSYRRGGRDFYA-AVVVLQMPDLAVVEKVTARGTVTFPYIPGLLSFRELPVV 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVD 210
L + P V+MVDG G+ HPR GLASH+G+ +L T+G K+ H
Sbjct: 96 LQAFKKLA-----LTPDVVMVDGQGIAHPRHLGLASHLGLWLDLATVGCAKSRLCGEHGP 150
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
+ G R L + NE + A+ +T + +KP++IS GH + +DT+V
Sbjct: 151 PGSRRGDRVALRLE---NETV------------GAVLTTRNGIKPLYISPGHLLDVDTSV 195
Query: 271 -MIVKMTCKYRVPEPIRQA 288
++++ +YR+PEP R A
Sbjct: 196 DLVLRCLGRYRLPEPTRLA 214
>gi|452857236|ref|YP_007498919.1| putative deoxyribonuclease V [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
gi|452081496|emb|CCP23265.1| putative deoxyribonuclease V [Bacillus amyloliquefaciens subsp.
plantarum UCMB5036]
Length = 238
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 19/199 (9%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVCS-IIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAEKLEAE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDF- 155
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VK 274
++ + + DI+ G +G A+R+ D +KPIF+S GH I L+++ + +K
Sbjct: 156 ---EMPENEVGAYTDILI----DGEVYGRALRTRRD-VKPIFLSCGHNIDLESSYQVTMK 207
Query: 275 MTCK-YRVPEPIRQADIRS 292
M + R+P P+R AD+ +
Sbjct: 208 MINRESRLPIPVRLADLET 226
>gi|417521917|ref|ZP_12183510.1| Endonuclease V [Salmonella enterica subsp. enterica serovar Uganda
str. R8-3404]
gi|353640267|gb|EHC85313.1| Endonuclease V [Salmonella enterica subsp. enterica serovar Uganda
str. R8-3404]
Length = 235
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 103/207 (49%), Gaps = 31/207 (14%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA------ 269
G + L A+ + PLM G RS P+FI+ GH +S D+A
Sbjct: 137 GKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSARDRTHV 191
Query: 270 -------VMIVKMTCKYRVPEPIRQAD 289
+ + YR+PEP R AD
Sbjct: 192 ATADSALAWVQRCMKGYRLPEPTRWAD 218
>gi|240139018|ref|YP_002963493.1| endonuclease V [Methylobacterium extorquens AM1]
gi|418058622|ref|ZP_12696592.1| Deoxyribonuclease V [Methylobacterium extorquens DSM 13060]
gi|240008990|gb|ACS40216.1| Endonuclease V (Deoxyinosine 3'endonuclease) (Deoxyribonuclease V)
(DNase V) [Methylobacterium extorquens AM1]
gi|373567861|gb|EHP93820.1| Deoxyribonuclease V [Methylobacterium extorquens DSM 13060]
Length = 220
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+S E A IVV+ +V ++ PY+PG L+FRE PVL
Sbjct: 38 VRLVAGVDVSVKNERSRAA---IVVVTFPGFLLVETAFAERPTPFPYIPGLLSFREGPVL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ P V + DG G+ HPR G+ASH+G+ TIGVGK
Sbjct: 95 EEAFGRLRAE-----PDVFLFDGMGIAHPRRIGIASHMGLWLERPTIGVGKT-------R 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G L ++ + +PL+ G T G +R+ TL P+FIS GH + +AV ++
Sbjct: 143 LVGTNAALPEEKGAH---VPLI-DRGETIGAVVRTRTSTL-PLFISPGHRADIPSAVELV 197
Query: 273 VKMTCKYRVPEPIRQADIRSRDY 295
+ + KYR+PEPIR A + D+
Sbjct: 198 LACSPKYRLPEPIRLAHKAAGDF 220
>gi|336323168|ref|YP_004603135.1| endonuclease V [Flexistipes sinusarabici DSM 4947]
gi|336106749|gb|AEI14567.1| Endonuclease V [Flexistipes sinusarabici DSM 4947]
Length = 214
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 34/206 (16%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
K + GVD+SF ++ I CI VL+ + ++ + + ++++PY+PG L+FRE P++
Sbjct: 27 KLVAGVDVSFERKT-GIGFCCIAVLN-NDMNLIQKAFHTQKIKLPYIPGLLSFRELPIIY 84
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++ + P + ++D G+ HPR GLASH GV+ N ++G KN
Sbjct: 85 QTMQKLR-----YEPDIYILDSQGIAHPRFLGLASHFGVVFNKVSVGCAKN--------- 130
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTW-------GVAMRSTPDTLKPIFISVGHCI-SL 266
R + + +E L+ GS S G +R T + +KP+FIS G+ I +
Sbjct: 131 ---RLVGEYQEPG------LIKGSFSIMHYKHKEVGAVVR-TKNNVKPVFISPGNLIDTQ 180
Query: 267 DTAVMIVKMTCKYRVPEPIRQADIRS 292
D+ +I+K YR+PEP R A I S
Sbjct: 181 DSINIILKYARGYRIPEPTRIAHILS 206
>gi|427801803|ref|ZP_18969307.1| endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|414061008|gb|EKT42469.1| endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 189
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 19/190 (10%)
Query: 101 DMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNM 160
D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+ + +
Sbjct: 1 DVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEQL 59
Query: 161 KKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQL 220
++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K G +
Sbjct: 60 SQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCGKFEP 107
Query: 221 LDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-Y 279
L A+ + PLM G RS P+FI+ GH +S D+A+ V+ K Y
Sbjct: 108 LSAEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQRCMKGY 162
Query: 280 RVPEPIRQAD 289
R+PEP R AD
Sbjct: 163 RLPEPTRWAD 172
>gi|345876667|ref|ZP_08828432.1| flavoprotein [endosymbiont of Riftia pachyptila (vent Ph05)]
gi|344226267|gb|EGV52605.1| flavoprotein [endosymbiont of Riftia pachyptila (vent Ph05)]
Length = 221
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 44/240 (18%)
Query: 53 NQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIA 112
Q E+Q +L ++I ED FT +++ GVD+ F ++ +
Sbjct: 16 QQARELQQQLSLKVIREDRFTTP-------------------RFVAGVDVGF-EDGGATT 55
Query: 113 CGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
+ +L +L+++ + L + PY+PG L+FRE P +L L ++ P +L
Sbjct: 56 RAAVALLRFPSLELLEHSIAHLPTRFPYLPGLLSFREIPAILEALKGLET-----APDML 110
Query: 173 MVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENNNE 229
+ DG GL HPR FGLA H+G++ + +IGV K+ H + G L+ K
Sbjct: 111 LCDGQGLAHPRRFGLACHLGLITDTPSIGVAKSRLIGTHAELPAEKGAWVTLEDK----- 165
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
G G +RS + +KP++IS+G ISL +A+ + T +Y++PE R A
Sbjct: 166 ---------GEIIGAVLRSRSN-VKPLYISIGQRISLASAIHYTLACTTRYKLPETTRWA 215
>gi|296331242|ref|ZP_06873714.1| YwqL [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305676229|ref|YP_003867901.1| deoxyribonuclease V [Bacillus subtilis subsp. spizizenii str. W23]
gi|296151357|gb|EFG92234.1| YwqL [Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305414473|gb|ADM39592.1| putative deoxyribonuclease V [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 238
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 22/211 (10%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T Q++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVCS-IIVIDADTKQVIEKVHSMGKISVPYVAGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P + + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAKKLETE-----PDLFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFV 156
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK- 274
+ + K DII G +G A+R+ D +KPIF+S G+ I L+++ I
Sbjct: 157 ----MPENKVGAYTDIII----DGEVYGRALRTRRD-VKPIFLSCGNHIDLESSYQITMS 207
Query: 275 -MTCKYRVPEPIRQADIRS---RDYLQKHQS 301
+ + R+P P+R AD+ + R + QK+ +
Sbjct: 208 LINQESRLPIPVRLADLETHVLRTFYQKNHA 238
>gi|448702582|ref|ZP_21700015.1| endonuclease V [Halobiforma lacisalsi AJ5]
gi|445777143|gb|EMA28113.1| endonuclease V [Halobiforma lacisalsi AJ5]
Length = 259
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 131/255 (51%), Gaps = 40/255 (15%)
Query: 58 IQDELKKRLITEDFFTWNLP----------NSTTTNTSTKEE-EEVLLKYIGGVDMSFSK 106
+Q E+ + ED F ++ N+ ++ T E E + GVD SF
Sbjct: 4 LQREIADAAVFEDDFPFDPAAITNPLEASANAAASDLETPEAAERADPPIVAGVDQSFLD 63
Query: 107 EDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANH 166
+D +++ V+ + +++ +++ L++PYVPG LAFRE +L+ L+ +
Sbjct: 64 DDRALSA----VVATRAGEVIERVHAVTPLEIPYVPGLLAFREGGPILAALEELS----- 114
Query: 167 FYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVRQL 220
P +L+ DG+G +H R G+A+HIGV+ ++ ++GV K+L + L +G R
Sbjct: 115 VSPDILLFDGSGRIHFRQAGIATHIGVVRDVPSVGVAKSLLCGEPAAETENLP-AGTRVP 173
Query: 221 LDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAVMIVK- 274
++A + + G+ G A+++ +PD + P+++S GH + +TA +V+
Sbjct: 174 IEADSSVD-------APDGTLLGYALQTRQYDSPDRYINPLYVSPGHRVGPETAADVVEA 226
Query: 275 MTCKYRVPEPIRQAD 289
+ Y++PEP+R AD
Sbjct: 227 LATSYKLPEPVRLAD 241
>gi|429506911|ref|YP_007188095.1| deoxyribonuclease V [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|429488501|gb|AFZ92425.1| deoxyribonuclease V [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
Length = 238
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 109/200 (54%), Gaps = 19/200 (9%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVCS-IIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ ++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAEKLEAE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDF- 155
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VK 274
++ + + DI+ G +G A+R+ D +KPIF+S GH I L+++ I +K
Sbjct: 156 ---EMPENEVGAYTDILI----DGEVYGRALRTRWD-VKPIFLSCGHNIDLESSYQITMK 207
Query: 275 MTCK-YRVPEPIRQADIRSR 293
M + R+P P+R AD+ +
Sbjct: 208 MINRDSRLPIPVRLADLETH 227
>gi|386717682|ref|YP_006184008.1| endonuclease V [Stenotrophomonas maltophilia D457]
gi|384077244|emb|CCH11830.1| Endonuclease V [Stenotrophomonas maltophilia D457]
Length = 224
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 113/197 (57%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ G+D+ F ++D +I V+LD++TL+ V ++ + + +PY+PG L+FRE P L
Sbjct: 38 VRWLAGLDVGF-EDDGAITRAAAVLLDVETLKPVAQEIARIPTVMPYIPGLLSFRELPAL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L + + P ++ VDG+G+ HPR G+A+H+GV+ +L +IGV K+ V
Sbjct: 97 LAALALLPR-----TPDLVFVDGHGISHPRRLGVAAHLGVVTDLPSIGVAKS-KLVGRFV 150
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G A + ++ + G +RS KP+F++ GH +S DTA+ V
Sbjct: 151 EPGAEAGAHAPLQDGDEQL----------GWVLRSKV-RCKPLFVAGGHRVSADTALDWV 199
Query: 274 KMTCK-YRVPEPIRQAD 289
+ T + YR+PEP R AD
Sbjct: 200 QRTLRGYRLPEPTRLAD 216
>gi|365874265|ref|ZP_09413798.1| deoxyinosine 3'endonuclease (endonuclease V) [Thermanaerovibrio
velox DSM 12556]
gi|363984352|gb|EHM10559.1| deoxyinosine 3'endonuclease (endonuclease V) [Thermanaerovibrio
velox DSM 12556]
Length = 217
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 109/205 (53%), Gaps = 29/205 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTL-QIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+++I GVD S + A + L+ L + +ED VPYVPGFL+FRE
Sbjct: 31 IRFISGVDCSEVQGRVRAAAVLMSWPQLEELGRSAFEDVC----TVPYVPGFLSFREMEP 86
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
++ L+ +K + +++VDG G+ HPRG G+ASH+GV + +IGV K+
Sbjct: 87 MMKALEALKGPVD-----LILVDGCGIAHPRGLGIASHLGVATGVPSIGVSKS------- 134
Query: 213 THSGVRQLLDAKENNNEDII---PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
L+ + E E + PL+ G G A+RS KPIF+S GH I L+ A
Sbjct: 135 ------PLVGSFEEPGEAPLSSSPLV-FQGRQVGWALRSR-KGCKPIFVSPGHLIDLEGA 186
Query: 270 VMIVKMTCK-YRVPEPIRQADIRSR 293
+ VKM + Y++PEPIR+AD S+
Sbjct: 187 LETVKMALRGYKLPEPIRRADRLSK 211
>gi|387900255|ref|YP_006330551.1| deoxyribonuclease V [Bacillus amyloliquefaciens Y2]
gi|387174365|gb|AFJ63826.1| deoxyribonuclease V [Bacillus amyloliquefaciens Y2]
Length = 246
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 19/199 (9%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 51 AGVDLAYWEQDGEPYGVCS-IIVIDADTKEVIEKVHSMGKIGVPYVSGFLAFRELPLIIE 109
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 110 AAKKLEAE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFV 164
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VK 274
+ A DII G +G A+R+ D +KPIF+S GH I L+++ I +K
Sbjct: 165 TPENEVGA----YTDIII----DGEVYGRALRTQRD-VKPIFLSCGHNIDLESSYQITMK 215
Query: 275 MTCK-YRVPEPIRQADIRS 292
M + R+P P+R AD+ +
Sbjct: 216 MINRESRLPIPVRLADLET 234
>gi|254561613|ref|YP_003068708.1| endonuclease V [Methylobacterium extorquens DM4]
gi|254268891|emb|CAX24852.1| Endonuclease V (Deoxyinosine 3'endonuclease) (Deoxyribonuclease V)
(DNase V) [Methylobacterium extorquens DM4]
Length = 220
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+S E A IVV+ +V ++ PY+PG L+FRE PVL
Sbjct: 38 VRLVAGVDVSVKNERSRAA---IVVVTFPGFLLVETAFAERPTPFPYIPGLLSFREGPVL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ P V + DG G+ HPR G+ASH+G+ TIGVGK
Sbjct: 95 EEAFGRLRAE-----PDVFLFDGMGIAHPRRIGIASHMGLWLERPTIGVGKT-------R 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G L ++ + +PL+ G T G +R+ TL P+FIS GH + +AV ++
Sbjct: 143 LVGTNAPLSEEKGAH---VPLI-DRGETIGAVVRTRTSTL-PLFISPGHRADIPSAVELV 197
Query: 273 VKMTCKYRVPEPIRQADIRSRDY 295
+ + KYR+PEPIR A + D+
Sbjct: 198 LACSPKYRLPEPIRLAHKAAGDF 220
>gi|384431528|ref|YP_005640888.1| Endonuclease V [Thermus thermophilus SG0.5JP17-16]
gi|333966996|gb|AEG33761.1| Endonuclease V [Thermus thermophilus SG0.5JP17-16]
Length = 226
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 107/207 (51%), Gaps = 21/207 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQ--VPYVPGFLAFREAP 151
++ I +D S + P +A + L+ L + +LL + PY+PG L+FREAP
Sbjct: 35 VRRIAALDASHKRGRPLVAVALLYDLEKGPLHV---GTALLPEEDLFPYIPGLLSFREAP 91
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
L L + + P+ L+VDG G+ HPRG G+ASH+GV +L ++GV K L + G
Sbjct: 92 AYLEALAALPE-----APEALLVDGQGVAHPRGLGIASHLGVHLDLPSVGVAKRLLY--G 144
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
+ + + L+G G G RS +KP+++S GH + L+ A+
Sbjct: 145 RPEAPL-------PEEKGAAVRLLGPDGRPLGYVYRSR-TGVKPLYVSPGHRVGLEEALR 196
Query: 272 IV-KMTCKYRVPEPIRQADIRSRDYLQ 297
V ++ ++R+PEP+R A + + L+
Sbjct: 197 FVRRLPTRFRLPEPLRLAHLEAGRALK 223
>gi|327401537|ref|YP_004342376.1| Endonuclease V [Archaeoglobus veneficus SNP6]
gi|327317045|gb|AEA47661.1| Endonuclease V [Archaeoglobus veneficus SNP6]
Length = 215
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 126/244 (51%), Gaps = 47/244 (19%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
QL + + Q+++ KR++ D ++ + +KY+ GVD +FS E
Sbjct: 2 QLEELKKKQEKMAKRVVLRDLYSIDE-----------------IKYVLGVDQAFSGETVV 44
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PVLLSLLDNMKKRANHFYP 169
AC V+L L+ V + S+ +PY+P FL FRE P + ++ ++++A
Sbjct: 45 SAC---VLLTFPELEHVDSNVSIAEAPMPYIPTFLMFREGEPAVEAVKKLLRRKA----- 96
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
++MVDG+G+ HPR GLA+++G+ +IG+ K + L + N +
Sbjct: 97 -IIMVDGSGIAHPRKCGLATYVGLKLATPSIGITK--------------KRLYGRVNEPQ 141
Query: 230 DII---PLMG-GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC-KYRVPEP 284
+++ P+ GS G A++ T +PI++S GH + +TA+ IVKM ++++PEP
Sbjct: 142 EVMESSPIYDEADGSVIGYAIK-TCKRCRPIYVSPGHGFTPETALEIVKMCLRRHKLPEP 200
Query: 285 IRQA 288
+R A
Sbjct: 201 VRFA 204
>gi|392397643|ref|YP_006434244.1| deoxyinosine 3'endonuclease [Flexibacter litoralis DSM 6794]
gi|390528721|gb|AFM04451.1| deoxyinosine 3'endonuclease (endonuclease V) [Flexibacter litoralis
DSM 6794]
Length = 226
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 14/199 (7%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+G +D+ + E+ IV+ D + +I++ + +PY+P F AFRE +++ L
Sbjct: 34 LGAIDVQYEGEN---GFAAIVIFDRKG-KILHTFTRKYKATIPYIPSFFAFREGDIIIKL 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + +K H +L++DG+G+ HPR FGLAS++G+ +IGV KN L ++G
Sbjct: 90 VRDAEKEL-HLNIDILLIDGHGIAHPRKFGLASYVGLALEKMSIGVAKNTL----LKYNG 144
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK-M 275
+ L ++++ DI G RS D +KPIF+S GH +S A+ I K
Sbjct: 145 I---LSKGKDSSLDIYLDQATKNELVGYVYRSRED-VKPIFVSAGHKLSSKQALEITKEH 200
Query: 276 TCKYRVPEPIRQADIRSRD 294
T +YR + +R+AD +R+
Sbjct: 201 TGEYRQLDVLREADRLARE 219
>gi|194434758|ref|ZP_03067009.1| endonuclease V [Shigella dysenteriae 1012]
gi|417674796|ref|ZP_12324228.1| endonuclease V [Shigella dysenteriae 155-74]
gi|420349983|ref|ZP_14851345.1| endonuclease V [Shigella boydii 965-58]
gi|194416982|gb|EDX33100.1| endonuclease V [Shigella dysenteriae 1012]
gi|332085395|gb|EGI90565.1| endonuclease V [Shigella dysenteriae 155-74]
gi|391264028|gb|EIQ23025.1| endonuclease V [Shigella boydii 965-58]
Length = 223
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 104/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+AS+ G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASYFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQSC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|288920207|ref|ZP_06414522.1| Deoxyribonuclease V [Frankia sp. EUN1f]
gi|288348385|gb|EFC82647.1| Deoxyribonuclease V [Frankia sp. EUN1f]
Length = 237
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 105/217 (48%), Gaps = 31/217 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G D+++ D + G +VVL +++ ++ R PYVPG L+FRE L L
Sbjct: 38 VAGFDVAYDT-DTDLLAGAVVVLAAPRWELIASATAVGRATFPYVPGLLSFRE---LSPL 93
Query: 157 LDNMKKRANHFY--PQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----HHVD 210
LD + P +L+ DG+G+ HPR FGLA H+GV L TIGV K H
Sbjct: 94 LDAWEAVLPQLAAPPDLLVCDGHGIAHPRRFGLACHLGVTVGLPTIGVAKTPFVGEHSAP 153
Query: 211 GLTHSGVRQ--LLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
G H G R +LD G G A+R T D ++ +++SVGH +LD+
Sbjct: 154 G-PHRGERAPIVLD----------------GEAMGAALR-TRDDVREVYLSVGHRTNLDS 195
Query: 269 AVMIVKMTC-KYRVPEPIRQADIRSRDYLQKHQSTCL 304
A V C +YR+PE R AD SR L + L
Sbjct: 196 ACRWVLDLCPRYRLPETTRAADQLSRAALANARRDVL 232
>gi|344206602|ref|YP_004791743.1| endonuclease V [Stenotrophomonas maltophilia JV3]
gi|343777964|gb|AEM50517.1| Endonuclease V [Stenotrophomonas maltophilia JV3]
Length = 224
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 113/197 (57%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ G+D+ F ++ +I V+LD +TLQ V ++ + + +PY+PG L+FRE P L
Sbjct: 38 VRWLAGLDVGF-EDGGAITRAAAVLLDAETLQPVVQEIARIPTVMPYIPGLLSFRELPAL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L + + P ++ VDG+G+ HPR G+A+H+GV+ +L +IGV K+ L
Sbjct: 97 LAALALLPR-----TPDLVFVDGHGISHPRRLGVAAHLGVVTDLPSIGVAKS-----KLV 146
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
V +A + PLM G G +RS KP+F++ GH +S DTA+ V
Sbjct: 147 GRFVEPGAEAGAHT-----PLMDGD-EQLGWVLRSK-IRCKPLFVAGGHRVSADTALDWV 199
Query: 274 KMTCK-YRVPEPIRQAD 289
+ T + YR+PEP R AD
Sbjct: 200 QRTLRGYRLPEPTRLAD 216
>gi|432730087|ref|ZP_19964957.1| endonuclease V [Escherichia coli KTE18]
gi|431270325|gb|ELF61494.1| endonuclease V [Escherichia coli KTE18]
Length = 223
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TI V K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTISVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|451345229|ref|YP_007443860.1| deoxyribonuclease V [Bacillus amyloliquefaciens IT-45]
gi|449848987|gb|AGF25979.1| deoxyribonuclease V [Bacillus amyloliquefaciens IT-45]
Length = 238
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 108/199 (54%), Gaps = 19/199 (9%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVCS-IIVIDADTTEVIEKVHSMGKISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKIYLKIKGCDF- 155
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VK 274
++ + + DI+ G +G A+R+ D +KPIF+S GH I L+++ I +K
Sbjct: 156 ---EMPENEVGAYTDILI----DGEVYGRALRTRRD-VKPIFLSCGHNIDLESSYQITMK 207
Query: 275 MTCK-YRVPEPIRQADIRS 292
M + R+P P+R AD+ +
Sbjct: 208 MINRESRLPIPVRLADLET 226
>gi|168701776|ref|ZP_02734053.1| endonuclease V (deoxyinosine 3'endoduclease) [Gemmata obscuriglobus
UQM 2246]
Length = 227
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 19/200 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ I G D+++ +P + +V+L + L +V E + PYVPG L+FRE P L
Sbjct: 37 ISLIAGCDIAYHLTEPRL-FAAVVILKMNDLSVVEELTVSREVTFPYVPGLLSFREVPAL 95
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L N++ P +M+DG G+ HPR FGLA H+G+ +L +G K+ L
Sbjct: 96 LELFGNLRH-----TPDAVMLDGQGIAHPRRFGLACHLGLWLDLPCVGCAKSW-----LV 145
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
A E + + G+ G +RS +KP+F+S GH I + +A +V
Sbjct: 146 GDYAEPGRTAGEASPLSV------DGAEVGAVVRSA-TGVKPVFVSPGHRIDVASATQLV 198
Query: 274 KMTCK-YRVPEPIRQADIRS 292
+ T YR P P R A I +
Sbjct: 199 RATLSGYRHPAPTRAAHIAA 218
>gi|384267151|ref|YP_005422858.1| deoxyribonuclease V [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|380500504|emb|CCG51542.1| deoxyribonuclease V [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
Length = 238
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 106/199 (53%), Gaps = 19/199 (9%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVCS-IIVIDADTKEVIEKVHSMGKIGVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAKKLEAE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFV 156
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VK 274
+ A DII G +G A+R+ D +KPIF+S GH I L+++ I +K
Sbjct: 157 TPENEVGAY----TDIII----DGEVYGRALRTQRD-VKPIFLSCGHNIDLESSYQITMK 207
Query: 275 MTCK-YRVPEPIRQADIRS 292
M + R+P P+R AD+ +
Sbjct: 208 MINRESRLPIPVRLADLET 226
>gi|352102846|ref|ZP_08959416.1| deoxyribonuclease V [Halomonas sp. HAL1]
gi|350599697|gb|EHA15781.1| deoxyribonuclease V [Halomonas sp. HAL1]
Length = 227
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 28/204 (13%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVL---DLQT---LQIVYEDYSLLRLQVPYVPGFLAF 147
+K+I GVD+ F ED VVL D T L +V + ++PY+PG L+F
Sbjct: 35 VKHIAGVDIGF--EDGGETTRAAVVLLEWDPATAPNLNVVEQVVHREPTRMPYIPGLLSF 92
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE P L + + P+++MVDG G+ HPR G+A+H+G+ +L TIG+ K+
Sbjct: 93 REIPAALGAFEKLS-----VLPELVMVDGQGIAHPRRLGVAAHLGLWLDLPTIGIAKSRL 147
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
+ H+ V + D +PL G T G +RS +KP+++S GH I+L+
Sbjct: 148 YGK---HAEVGE-------QRGDWVPLYAGQ-ETIGAVLRSR-AKVKPVYVSPGHRITLE 195
Query: 268 TAVMIVKMTC--KYRVPEPIRQAD 289
T++ V M C + ++PEP R AD
Sbjct: 196 TSLTWV-MRCLGRTKLPEPTRLAD 218
>gi|163851895|ref|YP_001639938.1| deoxyribonuclease V [Methylobacterium extorquens PA1]
gi|218530646|ref|YP_002421462.1| deoxyribonuclease V [Methylobacterium extorquens CM4]
gi|163663500|gb|ABY30867.1| Deoxyribonuclease V [Methylobacterium extorquens PA1]
gi|218522949|gb|ACK83534.1| Deoxyribonuclease V [Methylobacterium extorquens CM4]
Length = 220
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+S E A IVV+ +V ++ PY+PG L+FRE PVL
Sbjct: 38 VRLVAGVDVSVKNERSRAA---IVVVTFPGFLLVETAFAERPTPFPYIPGLLSFREGPVL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ P V + DG G+ HPR G+ASH+G+ TIGVGK
Sbjct: 95 EEAFGRLRAE-----PDVFLFDGMGIAHPRRIGIASHMGLWLERPTIGVGKT-------R 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G L ++ + +PL+ G T G +R+ TL P+FIS GH + +AV ++
Sbjct: 143 LVGTNAPLSEEKGAH---VPLI-DRGETIGAVVRTRTATL-PLFISPGHRADIPSAVELV 197
Query: 273 VKMTCKYRVPEPIRQADIRSRDY 295
+ + KYR+PEPIR A + D+
Sbjct: 198 LACSPKYRLPEPIRLAHKAAGDF 220
>gi|257053518|ref|YP_003131351.1| Deoxyribonuclease V [Halorhabdus utahensis DSM 12940]
gi|256692281|gb|ACV12618.1| Deoxyribonuclease V [Halorhabdus utahensis DSM 12940]
Length = 269
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 135/274 (49%), Gaps = 36/274 (13%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIG----- 98
PDP+ ++ +Q E+ + ED F ++ P++ ++ ++ + G
Sbjct: 10 PDPSLS--RDEMEALQREIADVALFEDGFAFD-PSAIEFDSPVDLGDDDQHRLTGDGPIV 66
Query: 99 -GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GVD +F +D A +V L Q ++V Y+++ ++PY+PG L+FRE +L+ L
Sbjct: 67 AGVDQAF-LDDGDRALSAVVAL--QDGRVVDRAYAVVDTEIPYIPGLLSFREGGAILAAL 123
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDG 211
N+ P +L+VDG+G +H R GLA+HIGV ++ IGV KNL +
Sbjct: 124 SNLA-----VEPDLLVVDGSGRIHFREAGLATHIGVTVDVPAIGVAKNLLCGTPAEPIPD 178
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAM-----RSTPDTLKPIFISVGHCIS- 265
G R ++A E G+ G A+ +S ++ P+++S GH +S
Sbjct: 179 RMAEGDRIPIEADERVE------TAEPGTVIGHAVQTRQYQSGSTSINPLYVSPGHRVSA 232
Query: 266 LDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQKH 299
+ TA ++ + Y++PEP R AD R D L++
Sbjct: 233 VTTADLVSQCAAGYKLPEPTRLAD-RKADRLKRE 265
>gi|321313161|ref|YP_004205448.1| endonuclease V [Bacillus subtilis BSn5]
gi|430756592|ref|YP_007207872.1| Endonuclease V [Bacillus subtilis subsp. subtilis str. BSP1]
gi|320019435|gb|ADV94421.1| endonuclease V [Bacillus subtilis BSn5]
gi|430021112|gb|AGA21718.1| Endonuclease V [Bacillus subtilis subsp. subtilis str. BSP1]
Length = 237
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 22/210 (10%)
Query: 98 GGVDMSFSKE--DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++ +P C I+V+D T +++ + +S+ R+ VPYV GFLAFRE P+++
Sbjct: 42 AGVDLAYWEQNGEPYGVC-SIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIE 100
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 101 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGYDFV 155
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK- 274
+ A DI+ G +G A+R+ D +KPIF+S G+ I LD++ I
Sbjct: 156 MPENEVGAY----TDILI----DGEVYGRALRTRGD-VKPIFLSCGNYIDLDSSYQITMS 206
Query: 275 -MTCKYRVPEPIRQADIRS---RDYLQKHQ 300
+ + R+P P+R AD+ + R + QK+
Sbjct: 207 LINQESRLPIPVRLADLETHVLRTFYQKNH 236
>gi|124006817|ref|ZP_01691647.1| endonuclease V [Microscilla marina ATCC 23134]
gi|123987498|gb|EAY27207.1| endonuclease V [Microscilla marina ATCC 23134]
Length = 235
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 136 LQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLA 195
+ PYVPGF FRE P L +L++++ A P +L+VDG+G+ HPR FG+A +GV
Sbjct: 71 VMAPYVPGFFCFREGPPLFALVNHLLNDATLPRPDLLVVDGHGIAHPRTFGVACWLGVKT 130
Query: 196 NLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKP 255
L TIG+ K L SG + N + I + G G A+R T +KP
Sbjct: 131 GLPTIGIAKK----SLLKFSG-------QVGNEQGSILDIAHKGQVVGYALR-TQTGIKP 178
Query: 256 IFISVGHCISLDTAVMI-VKMTCKYRVPEPIRQADIRSRDYLQKHQS 301
++S GH ++LDTA + + + +YR+P+ +R+AD +R + + Q+
Sbjct: 179 EYVSPGHLVALDTAKTVALNLVSEYRIPDVLRRADQMARLHSKDEQT 225
>gi|220905692|ref|YP_002481003.1| Deoxyribonuclease V [Cyanothece sp. PCC 7425]
gi|219862303|gb|ACL42642.1| Deoxyribonuclease V [Cyanothece sp. PCC 7425]
Length = 220
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 27/197 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+ F E + + VL+ LQ+ + + PY+PG L+FRE P +L
Sbjct: 40 VAGVDVGFEDEGRTTRAA-VAVLNWPQLQLQTQAIARQPTCFPYIPGLLSFREIPTVLVA 98
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLT 213
L + + +L+ DG G+ HPR FG+A H+GVL + TIGV K+ HH +
Sbjct: 99 LAQLPLLPD-----LLLCDGQGIAHPRRFGIACHLGVLLDCPTIGVAKSRLIGHHAEVSQ 153
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G Q L + E+II G +R+ P T KP++IS GH ISL+ A+ V
Sbjct: 154 ARGDWQPL----IDREEII----------GAVLRTRPRT-KPLYISTGHRISLERAIAYV 198
Query: 274 KMTC--KYRVPEPIRQA 288
M+C +YR+PE RQA
Sbjct: 199 -MSCTPRYRLPETTRQA 214
>gi|294954222|ref|XP_002788060.1| Endonuclease V, putative [Perkinsus marinus ATCC 50983]
gi|239903275|gb|EER19856.1| Endonuclease V, putative [Perkinsus marinus ATCC 50983]
Length = 189
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 24/157 (15%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS---KEDPS 110
+W E Q+ ++ R++ + E + +Y+GG D++ KED
Sbjct: 6 RWVEEQERIRSRVVV----------------GSCERKPYECEYVGGFDITSDPTLKEDFC 49
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
+A +V++ L + VYEDY + L PYVPGFLAFRE +L L+ +
Sbjct: 50 VAG--LVIVHLPSRSTVYEDYISVDLSQPYVPGFLAFRECEPMLELIRRVPPEQRL---D 104
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
V+MVDGNGLLHPR G A H+GVLA++ +IGV KN +
Sbjct: 105 VIMVDGNGLLHPRRCGAACHLGVLADIPSIGVAKNYY 141
>gi|46199284|ref|YP_004951.1| endonuclease V [Thermus thermophilus HB27]
gi|55981316|ref|YP_144613.1| endonuclease V [Thermus thermophilus HB8]
gi|56404383|sp|Q72IZ9.1|NFI_THET2 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|62286972|sp|Q5SIM2.1|NFI_THET8 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|46196909|gb|AAS81324.1| endonuclease V [Thermus thermophilus HB27]
gi|55772729|dbj|BAD71170.1| endonuclease V [Thermus thermophilus HB8]
Length = 226
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 106/207 (51%), Gaps = 21/207 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV--PYVPGFLAFREAP 151
++ I +D S + P +A + L+ L + +LL + PYVPG L+FREAP
Sbjct: 35 VRRIAALDASHKRGRPLVAVALLYDLEKGPLHVAT---ALLPEEALFPYVPGLLSFREAP 91
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
L L + + P+ L+VDG G+ HPRG G+ASH+GV +L ++GV K L + G
Sbjct: 92 AYLEALAALPE-----APEALLVDGQGVAHPRGLGIASHLGVHLDLPSVGVAKRLLY--G 144
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
+ + + L+ G G RS +KP+++S GH + L+ A+
Sbjct: 145 RPEAPL-------PEEKGAAVRLLAPDGRPLGYVYRSR-TGVKPLYVSPGHRVGLEEALR 196
Query: 272 IV-KMTCKYRVPEPIRQADIRSRDYLQ 297
V ++ ++R+PEP+R A + + L+
Sbjct: 197 FVRRLPTRFRLPEPLRLAHLEAGRALK 223
>gi|271965363|ref|YP_003339559.1| deoxyribonuclease V [Streptosporangium roseum DSM 43021]
gi|270508538|gb|ACZ86816.1| Deoxyribonuclease V [Streptosporangium roseum DSM 43021]
Length = 223
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/204 (37%), Positives = 103/204 (50%), Gaps = 33/204 (16%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+++ E + A + VLD TL++V + R+ YVPG LAFRE P LL
Sbjct: 36 VAGVDVAYDGERLAAA---VAVLDASTLEVVEQVTVGGRVAFDYVPGLLAFREVPALLEA 92
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L+ + P +++ DG GL HPR FGLA H+GVL L TIGVGK
Sbjct: 93 LERLT-----VTPDLVVCDGYGLAHPRRFGLACHLGVLTGLPTIGVGKT----------- 136
Query: 217 VRQLLDAKENNNEDIIPLMGG------SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
A + D P G G G +R T +KP+F+SVGH + LDTA
Sbjct: 137 ------AFVGSYPDPAPERGSWTDLTLDGDVVGRVLR-TRHGVKPVFVSVGHRVDLDTAC 189
Query: 271 M-IVKMTCKYRVPEPIRQADIRSR 293
++ +T YR+PE R +D SR
Sbjct: 190 RNVLALTPHYRLPETTRVSDRLSR 213
>gi|122879106|ref|YP_200098.6| endonuclease V [Xanthomonas oryzae pv. oryzae KACC 10331]
Length = 237
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 19/203 (9%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
+E + + G D+ F ++D V+LD TL + + +PYVPG L+F
Sbjct: 33 DEVSATPQLLAGFDVGF-EDDGQTTRAAAVLLDAHTLLPLETHVARAPTSMPYVPGLLSF 91
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE P LL L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 92 RELPALLQALARLSR-----TPDLVFIDGQGIAHPRRLGIAAHFGVVTGLPCIGIAKQ-R 145
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
G E + I L+GG+ W A+RS P P+ +S GHC+S+
Sbjct: 146 LAGSFAEPG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHCVSMQ 194
Query: 268 TAVMIVKMTCK-YRVPEPIRQAD 289
A+ T + YR+PEP R AD
Sbjct: 195 GALGWTLRTLRSYRLPEPTRLAD 217
>gi|448688551|ref|ZP_21694353.1| endonuclease V [Haloarcula japonica DSM 6131]
gi|445779217|gb|EMA30154.1| endonuclease V [Haloarcula japonica DSM 6131]
Length = 269
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 135/268 (50%), Gaps = 41/268 (15%)
Query: 44 PDPA-AQAQLNQWTEIQDELKKRLITEDFFTW---------NLPNSTTTNTSTKEEEEVL 93
PDP+ +QA++ E+Q ++ + ED + + P T ST +++
Sbjct: 10 PDPSLSQAEME---ELQRDIAEVARFEDDLGFSPQGIARPGDAPGVDQTTLSTSDDDPTD 66
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ GVD +F + A +VVL Q ++V ++ R ++PY+PG L+FRE +
Sbjct: 67 PPLVAGVDQAFVDDK---AVSAVVVL--QNGEVVERVSAVKRTEIPYIPGLLSFREGGAI 121
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------H 207
L+ ++ P V++VDG+G +H R GLA+HIGV ++ +GV K+L
Sbjct: 122 LAAFAELETD-----PDVVLVDGSGRIHFREAGLATHIGVTLDVPAVGVAKSLLCGTPER 176
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGH 262
+D G R + A +++ + P G+ G A+++ +P+ + P+ +S GH
Sbjct: 177 SLDETYPEGTRIPIAA--DDSVETCP----DGTVIGHALQTRQYDSPNRYINPLIVSPGH 230
Query: 263 CISLDTAVMIVKMTCK-YRVPEPIRQAD 289
+S TA IV+ T Y++PEP R AD
Sbjct: 231 RVSASTAADIVEATADGYKLPEPTRLAD 258
>gi|289523620|ref|ZP_06440474.1| deoxyribonuclease V [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503312|gb|EFD24476.1| deoxyribonuclease V [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 239
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 18/196 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ IGG+D+++ C ++ D T + V Y + PY+PG L+FRE P+
Sbjct: 50 IRLIGGIDVAYKGRGAKEGCAVALIWDRLTGETVEAVYVEESINFPYIPGLLSFRELPIA 109
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ D + +A+ + M+DG G+ HPR G+A+H GV+ +L IGV K+ + G +
Sbjct: 110 IKAFDKLSLKAD-----LWMIDGAGIAHPRRLGIAAHFGVVLDLPAIGVAKS--RLIG-S 161
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
H V +PL +G G +R+ D ++P+++S GH +SL + +V
Sbjct: 162 HLPV-------PRTKGSWVPLR-QNGEVIGHVLRTRSD-VRPLYVSPGHKVSLLQSANLV 212
Query: 274 KMTC-KYRVPEPIRQA 288
C +YR+PEP R A
Sbjct: 213 LACCSRYRLPEPTRLA 228
>gi|336476201|ref|YP_004615342.1| Deoxyribonuclease V [Methanosalsum zhilinae DSM 4017]
gi|335929582|gb|AEH60123.1| Deoxyribonuclease V [Methanosalsum zhilinae DSM 4017]
Length = 229
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 109/200 (54%), Gaps = 22/200 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L IGG D +F K+ SI C VV+D T++I+ + + + PY+P FL+FREA +
Sbjct: 40 LHLIGGADCAFVKD--SIICSA-VVMDYDTMEIIEKAAVIEPVTFPYIPTFLSFREAAPM 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ + +K P +LM+DG G+ HPR GLA+HIGV ++ TIG+ K +
Sbjct: 97 INAVLRLKN-----IPDILMIDGCGINHPRMAGLATHIGVSMDMPTIGIAKKI------- 144
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
GV + N D PL +G G ++S+ + PI I+ GH +S+ T++ +V
Sbjct: 145 LCGVSD----EPQNVSDAKPL-KYNGRQVGWYLKSSKRS-NPIVIAPGHRVSVKTSLTVV 198
Query: 274 KMTCK-YRVPEPIRQADIRS 292
+ + Y++PE R A + +
Sbjct: 199 RNCLRGYKLPETTRNAHLEA 218
>gi|254221055|pdb|3HD0|A Chain A, Crystal Structure Of Tm1865, An Endonuclease V From
Thermotoga Maritima
gi|254221056|pdb|3HD0|B Chain B, Crystal Structure Of Tm1865, An Endonuclease V From
Thermotoga Maritima
gi|254221057|pdb|3HD0|D Chain D, Crystal Structure Of Tm1865, An Endonuclease V From
Thermotoga Maritima
Length = 237
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 40/232 (17%)
Query: 74 WNLPNSTTTNTSTKEEEEVLL-------KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI 126
W+LP + +++ L +Y+ GVD+SF ++ +A IVVL+ + +I
Sbjct: 21 WDLPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVDLSFPGKEEGLAV--IVVLEYPSFKI 78
Query: 127 VYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFG 186
+ + PY+PG LAFRE P+ L + ++ + P V++ DG GL HPR G
Sbjct: 79 LEVVSERGEITFPYIPGLLAFREGPLFLKAWEKLRTK-----PDVVVFDGQGLAHPRKLG 133
Query: 187 LASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE------NNNEDIIPLMGGSGS 240
+ASH G+ + TIGV K+ + G + + K + E+II
Sbjct: 134 IASHXGLFIEIPTIGVAKSRLY-------GTFKXPEDKRCSWSYLYDGEEII-------- 178
Query: 241 TWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQADI 290
G +R T + PIF+S GH ++++ ++K R+PEP R A I
Sbjct: 179 --GCVIR-TKEGSAPIFVSPGHLXDVESSKRLIKAFTLPGRRIPEPTRLAHI 227
>gi|307545774|ref|YP_003898253.1| deoxyribonuclease V [Halomonas elongata DSM 2581]
gi|307217798|emb|CBV43068.1| deoxyribonuclease V [Halomonas elongata DSM 2581]
Length = 276
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 117/246 (47%), Gaps = 43/246 (17%)
Query: 63 KKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK-------YIGGVDMSFSKEDPSIACGC 115
+ R+ T WNL + V L+ I GVD+ F +E I
Sbjct: 48 EARMSTSPLHDWNLAPQAAIELQKRLAGRVELEDRLDPVSRIAGVDIGF-EEGGEITRAA 106
Query: 116 IVVL--------DLQTL-QIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANH 166
+VVL D + + Q+V+ + + ++PY+PG L+FRE P L+ + +
Sbjct: 107 VVVLAWPPIATGDFEVVEQVVHREPT----RMPYIPGLLSFREVPAALAAFARLTTQ--- 159
Query: 167 FYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKEN 226
P+++MVDG G+ HPR G+ASH+G+ +L T+G+ K+ R E
Sbjct: 160 --PELIMVDGQGIAHPRRLGVASHLGLWLDLPTLGIAKS------------RLCGRHAEP 205
Query: 227 NNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPE 283
NE D PL G T G +RS + +KP+F+S GH +SL TA+ + ++PE
Sbjct: 206 GNEKGDWTPLKHGE-DTIGAVLRSRTN-VKPVFVSPGHRLSLPTALDWATACLGRTKLPE 263
Query: 284 PIRQAD 289
P R AD
Sbjct: 264 PTRLAD 269
>gi|221046495|pdb|2W36|A Chain A, Structures Of Endonuclease V With Dna Reveal Initiation Of
Deaminated Adenine Repair
gi|221046496|pdb|2W36|B Chain B, Structures Of Endonuclease V With Dna Reveal Initiation Of
Deaminated Adenine Repair
Length = 225
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 115/235 (48%), Gaps = 40/235 (17%)
Query: 74 WNLPNSTTTNTSTKEEEEVLL-------KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI 126
W+LP + +++ L +Y+ GV +SF ++ +A IVVL+ + +I
Sbjct: 9 WDLPPEEAIKVQNELRKKIKLTPYEGEPEYVAGVALSFPGKEEGLAV--IVVLEYPSFKI 66
Query: 127 VYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFG 186
+ + PY+PG LAFRE P+ L + ++ + P V++ DG GL HPR G
Sbjct: 67 LEVVSERGEITFPYIPGLLAFREGPLFLKAWEKLRTK-----PDVVVFDGQGLAHPRKLG 121
Query: 187 LASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE------NNNEDIIPLMGGSGS 240
+ASH+G+ + TIGV K+ + G ++ + K + E+II
Sbjct: 122 IASHMGLFIEIPTIGVAKSRLY-------GTFKMPEDKRCSWSYLYDGEEII-------- 166
Query: 241 TWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQADIRSR 293
G +R T + PIF+S GH + ++++ ++K R+PEP R A I ++
Sbjct: 167 --GCVIR-TKEGSAPIFVSPGHLMDVESSKRLIKAFTLPGRRIPEPTRLAHIYTQ 218
>gi|438033586|ref|ZP_20855403.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
gi|435326641|gb|ELO98438.1| endonuclease V [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-5646]
Length = 180
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 18/177 (10%)
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
+V+L +L++V + + +PY+PGFL+FRE P LL+ + + ++ P +L
Sbjct: 4 AAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQK-----PDLLF 58
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
VDG+G+ HPR G+ASH G+L ++ TIGV K G + L + + P
Sbjct: 59 VDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCGKFEPLSTEPGA---LSP 108
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
LM G RS P+FI+ GH +S D+A+ V+ K YR+PEP R AD
Sbjct: 109 LM-DKGEQLAWVWRSK-ARCNPLFIATGHRVSTDSALAWVQRCMKGYRLPEPTRWAD 163
>gi|338210551|ref|YP_004654600.1| endonuclease V [Runella slithyformis DSM 19594]
gi|336304366|gb|AEI47468.1| Endonuclease V [Runella slithyformis DSM 19594]
Length = 235
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 98/197 (49%), Gaps = 27/197 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVV--LDLQTLQIVYEDYSLLRLQ--VPYVPGFLAFREAPV 152
I G D+S +I G +++ DLQ L YSL++ PYVPGFLAFRE P
Sbjct: 36 IAGADISLDLYSETIYAGIVILRYADLQPLA-----YSLVKSTNTFPYVPGFLAFREVPA 90
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
L+ L + P V+MVDG+G+ HPR G+A+H G L N T+G K +
Sbjct: 91 LVQALAQIP-----IAPDVIMVDGHGIAHPRRMGIATHFGTLTNTATLGCAKKILFGKWP 145
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL-DTAVM 271
++ ++ E I G AMRS + +KPIFIS G+ + L D+ +
Sbjct: 146 EPEAIKGSYTLIKDKEEII-----------GYAMRSK-NNVKPIFISPGNQMCLQDSLNI 193
Query: 272 IVKMTCKYRVPEPIRQA 288
V +R+PEP R+A
Sbjct: 194 TVHCLRNHRLPEPTRKA 210
>gi|354611982|ref|ZP_09029934.1| Endonuclease V [Halobacterium sp. DL1]
gi|353191560|gb|EHB57066.1| Endonuclease V [Halobacterium sp. DL1]
Length = 279
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 128/261 (49%), Gaps = 34/261 (13%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEE--EEVLLKYIGGVD 101
PDPA Q + +Q +L ED ++ ++ + T ++ + + GVD
Sbjct: 27 PDPALARQ--EMEALQRDLAAEATFEDDVDFDPADAAISETPDEQAGLDARDAPVVVGVD 84
Query: 102 MSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMK 161
+F +D S++ + Q +V L++PY+PG L+FRE ++ L+++
Sbjct: 85 QAF-LDDESVSAAVAI----QDGAVVERAAGRAPLEIPYIPGLLSFREGGAIVDALESLS 139
Query: 162 KRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHS 215
P VL++DG+G +H R G+A+H+GVL + +GV KNL +D
Sbjct: 140 -----IDPDVLVLDGSGRIHFRQAGIATHVGVLFDAPAVGVAKNLLCGTPRSTLDDPLPE 194
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT--LKPIFISVGHCISLDTA 269
G R ++A + + +G+ G A +S P+ + P+ +S GH ++ +TA
Sbjct: 195 GARVAIEADGSMD-------APTGTVVGYAYQSRQYPNPEKRHVNPLIVSPGHRVNAETA 247
Query: 270 VMIVKMTCK-YRVPEPIRQAD 289
V +V+ TC Y++PEP R AD
Sbjct: 248 VDVVEATCAGYKLPEPTRLAD 268
>gi|448726200|ref|ZP_21708610.1| endonuclease V [Halococcus morrhuae DSM 1307]
gi|445795818|gb|EMA46338.1| endonuclease V [Halococcus morrhuae DSM 1307]
Length = 263
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 131/258 (50%), Gaps = 35/258 (13%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMS 103
PDP++ + + +Q + I D F ++ + NT T + + + G+D +
Sbjct: 10 PDPSSSRE--EMETLQRTVADEAIFADEFPFDPATVSMANTLTATTGDSPI--VVGIDQA 65
Query: 104 FSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKR 163
F E A G +V L + ++V + + + PY+PG L+FREA +++ L+ +
Sbjct: 66 FLDER---AVGAVVAL--RDGEVVERASAAVDCEFPYIPGLLSFREAGAIVAALEALDAE 120
Query: 164 ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGV 217
P + + DG+G +H R GLA+H+GV+ +L +IGV K+L +DG + G
Sbjct: 121 -----PDLAVFDGSGRIHYREAGLATHLGVVFDLPSIGVAKSLLCGTPRGSLDGRSE-GA 174
Query: 218 RQLLDAKENNNEDIIPLMGGSGSTWGVAMR-----STPDTLKPIFISVGHCISLDTAVMI 272
R +DA +ED+ + G T G A++ S + P+++S GH + +TA +
Sbjct: 175 RVAIDA----DEDVEEVEG----TIGYALQTRQYDSGNRHINPVYVSPGHRVGPETATDL 226
Query: 273 VKMTCK-YRVPEPIRQAD 289
V+ C Y++PEP R AD
Sbjct: 227 VEQLCDGYKLPEPTRLAD 244
>gi|403236943|ref|ZP_10915529.1| deoxyribonuclease V [Bacillus sp. 10403023]
Length = 227
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 108/211 (51%), Gaps = 23/211 (10%)
Query: 97 IGGVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+ GVD+++ S+ + CIV++D T +I+ + +++ PY+PG+LAFRE P++L
Sbjct: 34 VAGVDIAYWSENNVDYGVCCIVIVDYSTKEIIEQVEYKGKVEFPYLPGYLAFRELPLILK 93
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ +K P + M DGNG LH R G+A+ TIGV K ++ +
Sbjct: 94 AVKMLKN-----IPDIYMFDGNGYLHKRHMGIATQASFDLGKPTIGVAKTYFKIENTDFA 148
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
+ + DII G +G +R+ D +KPIF+S G+ I LDTA K+
Sbjct: 149 MPENIAGSY----TDIII----DGEVYGRTLRTRVD-VKPIFVSCGNWIDLDTA---TKI 196
Query: 276 TCKY-----RVPEPIRQADIRSRDYLQKHQS 301
T + R+P R AD+ + + +++Q+
Sbjct: 197 TMHFIEKHSRLPITTRYADLATHEARKRYQN 227
>gi|386360146|ref|YP_006058391.1| deoxyinosine 3'endonuclease [Thermus thermophilus JL-18]
gi|383509173|gb|AFH38605.1| deoxyinosine 3'endonuclease (endonuclease V) [Thermus thermophilus
JL-18]
Length = 226
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 23/208 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIV---YEDYSLLRLQVPYVPGFLAFREA 150
++ I +D S + P +A + L+ L + + +L PYVPG L+FREA
Sbjct: 35 VRRIAALDASHKQGRPLVAVALLYDLEKGPLHVATAFLPEEALF----PYVPGLLSFREA 90
Query: 151 PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
P L L + + P+ L+VDG G+ HPRG G+ASH+GV +L ++GV K L +
Sbjct: 91 PAYLEALAALPE-----APEALLVDGQGVAHPRGLGIASHLGVHLDLPSVGVAKRLLY-- 143
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G + + + L+ G G RS +KP+++S GH + L+ A+
Sbjct: 144 GRPEAPL-------PEEKGAAVRLLAPDGRPLGYVYRSR-TGVKPLYVSPGHRVGLEEAL 195
Query: 271 MIV-KMTCKYRVPEPIRQADIRSRDYLQ 297
V ++ ++R+PEP+R A + + L+
Sbjct: 196 RFVRRLPTRFRLPEPLRLAHLEAGRALK 223
>gi|170288750|ref|YP_001738988.1| deoxyribonuclease V [Thermotoga sp. RQ2]
gi|226730071|sp|B1LAF7.1|NFI_THESQ RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|170176253|gb|ACB09305.1| Deoxyribonuclease V [Thermotoga sp. RQ2]
Length = 225
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 33/204 (16%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+Y+ GVD+SF + +A IVVL+ + +IV + PY+PG LAFRE P+ L
Sbjct: 37 EYVAGVDLSFPGKKEGLAV--IVVLEYPSFRIVEIVSERGEITFPYIPGLLAFREGPLFL 94
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++ + P V++ DG GL HPR G+ASH+G+ + TIGV K+ +
Sbjct: 95 KAWEKLRTK-----PDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLY------ 143
Query: 215 SGVRQLLDAKE------NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
G ++ + K + E+II G +R T + P+F+S GH + +++
Sbjct: 144 -GTFKMPEDKRCSWSYLYDGEEII----------GCVVR-TKEGSAPVFVSPGHLMDVES 191
Query: 269 AVMIVKMTC--KYRVPEPIRQADI 290
+ +VK R+PEP R A I
Sbjct: 192 SKRLVKAFTLPGRRIPEPTRLAHI 215
>gi|116747707|ref|YP_844394.1| deoxyribonuclease V [Syntrophobacter fumaroxidans MPOB]
gi|116696771|gb|ABK15959.1| Endonuclease V [Syntrophobacter fumaroxidans MPOB]
Length = 230
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 23/200 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVL--DLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
+ +G D+ + K +A + DL L+ V+ ++ ++ PY+PG L+FRE P
Sbjct: 36 FRILGASDIGYVKAGERLAAVMLTFSWPDLLPLEAVH---AICPVRFPYIPGLLSFREIP 92
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
L+ + +KKR P VL+ DG G+ HPR FGLA+H+G+ L TIG K + G
Sbjct: 93 PLIEAFEQLKKR-----PDVLLCDGQGIAHPRKFGLAAHLGLYLGLPTIGCAKK--RLCG 145
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGH-CISLDTAV 270
+ S N +PL + V + D +KPIF+S GH C
Sbjct: 146 IHAS--------PPNKKGCSVPLYLDREAVGSVY--CSRDNVKPIFVSPGHLCDQKSAER 195
Query: 271 MIVKMTCKYRVPEPIRQADI 290
++ + +YR+PEP+RQA +
Sbjct: 196 LVARCLGRYRIPEPLRQAHL 215
>gi|442318627|ref|YP_007358648.1| endonuclease V [Myxococcus stipitatus DSM 14675]
gi|441486269|gb|AGC42964.1| endonuclease V [Myxococcus stipitatus DSM 14675]
Length = 233
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 102/196 (52%), Gaps = 19/196 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ I G D+S K G IVVLD +L V + S + L+ PYVPG L+FRE PV+
Sbjct: 38 VERIAGADVSTEKGR-DTGYGGIVVLDAGSLTPVAQAGSAVPLRFPYVPGLLSFRELPVV 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ R P VL+ DG+G+ HPR G+A H G+L + +IG K+L
Sbjct: 97 AEAWARLEVR-----PDVLIFDGHGIAHPRRLGIACHGGLLLGVPSIGCAKSL------- 144
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G L A + I+ G+A+R T +++P+++S GH + L TAV +
Sbjct: 145 LVGKHGRLGAARGSTSPIL----HKDEVVGMAVR-TRKSVQPVYVSPGHLMDLPTAVEWV 199
Query: 273 VKMTCKYRVPEPIRQA 288
++ + KYR PE R A
Sbjct: 200 LRASPKYREPETTRHA 215
>gi|399575420|ref|ZP_10769178.1| endonuclease v [Halogranum salarium B-1]
gi|399239688|gb|EJN60614.1| endonuclease v [Halogranum salarium B-1]
Length = 262
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 131/264 (49%), Gaps = 31/264 (11%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFS 105
P A + E+Q ++ D +++ N +T +S EEE L + GVD +F
Sbjct: 10 PDASLSRAEMEELQWDVASAAEFTDDLSFDPANVSTAQSSLVPEEERPL--VAGVDQAFL 67
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
+D A IVVL + ++V +++ L +PY+PG L+FRE ++ +
Sbjct: 68 DDD---AVSAIVVL--RGGEVVERVHAVTELSIPYIPGLLSFREGGPIVDAFAELDCE-- 120
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL-----HHVDGLTHSGVRQL 220
P +++ DG+G +H R GLA+H+GV+ ++ IGV KNL G G R
Sbjct: 121 ---PDLVLFDGSGRIHFRQAGLATHMGVVLDVPAIGVAKNLLCGRARESVGKRPEGWRTP 177
Query: 221 LDAKENNNEDIIPLMGGSGSTW-----GVAMRST--PDT--LKPIFISVGHCISLDTAVM 271
++A + + P ST+ G A +S P++ + P+++S GH +S +T V
Sbjct: 178 IEAADG----VKPRPTDDASTFSDTVVGYAYQSRQYPNSKQINPLYVSPGHRVSAETTVE 233
Query: 272 IV-KMTCKYRVPEPIRQADIRSRD 294
+V ++ Y++PEP R AD + D
Sbjct: 234 LVERLGGDYKLPEPTRLADAYADD 257
>gi|388582828|gb|EIM23131.1| hypothetical protein WALSEDRAFT_67448 [Wallemia sebi CBS 633.66]
Length = 169
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 86/167 (51%), Gaps = 7/167 (4%)
Query: 139 PYVPGFLAFREA-PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANL 197
PY+P +LA RE+ P+ + + + PQV +VDGNG LH R GLA+ IGV ++
Sbjct: 3 PYIPSYLAMRESKPIRETFYNFINTLEVDDIPQVYIVDGNGRLHDREAGLATQIGVELDI 62
Query: 198 TTIGVGKNLHHVDGLTH-----SGVRQLLDAKENNNEDIIPLMGGSGSTW-GVAMRSTPD 251
TIG KN + + L + R + K + + L G + G A+ +
Sbjct: 63 ATIGASKNYYPLTSLNNWRSDAKSFRSTIKGKLKRRGEWLGLFNIYGKEYVGAALLTGEK 122
Query: 252 TLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
PI+IS GH +L A+ + T K+RVPEPIR AD R Y++K
Sbjct: 123 ANNPIYISAGHKCTLYYAIAMTLSTAKHRVPEPIRIADQAGRQYVEK 169
>gi|281412053|ref|YP_003346132.1| Deoxyribonuclease V [Thermotoga naphthophila RKU-10]
gi|281373156|gb|ADA66718.1| Deoxyribonuclease V [Thermotoga naphthophila RKU-10]
Length = 225
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 33/204 (16%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+Y+ GVD+SF + +A IVVL+ + +IV + PY+PG LAFRE P+ L
Sbjct: 37 EYVAGVDLSFPGKKEGLAV--IVVLEYPSFRIVEIVSERGEITFPYIPGLLAFREGPLFL 94
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ ++ + P V++ DG GL HPR G+ASH+G+ + TIGV K+ +
Sbjct: 95 KAWEKLRTK-----PDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAKSRLY------ 143
Query: 215 SGVRQLLDAKE------NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
G ++ + K + E+II G +R T + P+F+S GH + +++
Sbjct: 144 -GTFKMPEDKRCSWSYLYDGEEII----------GCVVR-TKEGSAPVFVSPGHLMDVES 191
Query: 269 AVMIVKMTC--KYRVPEPIRQADI 290
+ ++K R+PEP R A I
Sbjct: 192 SKRLIKAFTLPGRRIPEPTRLAHI 215
>gi|389693979|ref|ZP_10182073.1| deoxyinosine 3'endonuclease (endonuclease V) [Microvirga sp.
WSM3557]
gi|388587365|gb|EIM27658.1| deoxyinosine 3'endonuclease (endonuclease V) [Microvirga sp.
WSM3557]
Length = 225
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 104/229 (45%), Gaps = 38/229 (16%)
Query: 74 WNLPNSTTTNTSTKEEEEVL---------LKYIGGVDMSFSKEDPSIACGCIVVLDLQTL 124
WNL S + EV+ ++ + GVD+S E A IVV+
Sbjct: 9 WNLTPSEAIALQQQLRTEVVSDRPIDLDAVRLVAGVDVSVKNEQSQAA---IVVVTYPGF 65
Query: 125 QIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRG 184
V + PYVPG L+FRE PVL + ++ P V + DG G+ HPR
Sbjct: 66 LPVETVLAQRPTPFPYVPGLLSFREGPVLEEAFEKLRSE-----PDVFLFDGMGIAHPRR 120
Query: 185 FGLASHIGVLANLTTIGVGKNL---HHVD-GLTHSGVRQLLDAKENNNEDIIPLMGGSGS 240
G+ASH+G+ TIG GK L + D G L+D +E
Sbjct: 121 IGIASHMGLWLQRPTIGCGKTLLCGRYKDLGEEKGSAAPLIDRRE--------------- 165
Query: 241 TWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
T GVA+R T P+FIS GH + TA ++++ + KYR+PEPIR A
Sbjct: 166 TIGVALR-TRTAKNPMFISPGHLADIPTAAELVLRCSPKYRLPEPIRLA 213
>gi|417176749|ref|ZP_12006545.1| deoxyribonuclease V [Escherichia coli 3.2608]
gi|419872045|ref|ZP_14394090.1| endonuclease V [Escherichia coli O103:H2 str. CVM9450]
gi|386179441|gb|EIH56920.1| deoxyribonuclease V [Escherichia coli 3.2608]
gi|388335659|gb|EIL02216.1| endonuclease V [Escherichia coli O103:H2 str. CVM9450]
Length = 223
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 103/194 (53%), Gaps = 19/194 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+ GFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYILGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV K G
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLCG 137
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+ L ++ + PLM G RS P+FI+ GH +S+D+A+ V+
Sbjct: 138 KFEPLSSEPGA---LAPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSVDSALAWVQRC 192
Query: 277 CK-YRVPEPIRQAD 289
K YR+PEP R AD
Sbjct: 193 MKGYRLPEPTRWAD 206
>gi|254521292|ref|ZP_05133347.1| endonuclease V [Stenotrophomonas sp. SKA14]
gi|219718883|gb|EED37408.1| endonuclease V [Stenotrophomonas sp. SKA14]
Length = 221
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 112/197 (56%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ G+D+ F ++D +I V+LD TL+ V ++ + + +PY+PG L+FRE P L
Sbjct: 35 VRWLAGLDVGF-EDDGAITRAAAVLLDATTLRPVAQEIARIPTVMPYIPGLLSFRELPAL 93
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L + + P ++ VDG+G+ HPR G+A+H+GV+ +L +IGV K+ L
Sbjct: 94 LAALALLPR-----TPDLVFVDGHGISHPRRLGVAAHLGVVTDLPSIGVAKS-----KLV 143
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
V +A + PL+ G G +RS KP+F++ GH +S DTA+ V
Sbjct: 144 GRFVEPGAEAGAHT-----PLLDGD-EQLGWVLRSKV-RCKPLFVAGGHRVSADTALDWV 196
Query: 274 KMTC-KYRVPEPIRQAD 289
+ T YR+PEP R AD
Sbjct: 197 QRTLHGYRLPEPTRLAD 213
>gi|160902633|ref|YP_001568214.1| deoxyribonuclease V [Petrotoga mobilis SJ95]
gi|189029072|sp|A9BHL9.1|NFI_PETMO RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|160360277|gb|ABX31891.1| Deoxyribonuclease V [Petrotoga mobilis SJ95]
Length = 221
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+SF K++ IV +D + L ++ Y++ ++ +PY+PG LAFRE P+ L
Sbjct: 39 VSGVDLSFPKDE---GLAVIVTMDFKKLSVIDVTYAVDKITLPYIPGLLAFRELPIFLKA 95
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ ++ P ++ DG G HPR G+A+H TIG+ K+
Sbjct: 96 WEKLEIE-----PDIVFFDGQGYAHPRRMGIATHASFFIEKPTIGIAKS----------- 139
Query: 217 VRQLLDAKE--NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
+L+ E + + G+ +R T D +KP+F+S G+ + + A+
Sbjct: 140 --KLIGEYEEPGKKKGEFTFLYHKDEKIGIVLR-TRDNVKPVFVSPGNLVDFNNALDFTY 196
Query: 274 KMTCKYRVPEPIRQADIRSRDYLQK 298
KY++PE R+A + ++ Q+
Sbjct: 197 HFATKYKIPEITRKAHLYTQSLKQR 221
>gi|158317185|ref|YP_001509693.1| deoxyribonuclease V [Frankia sp. EAN1pec]
gi|158112590|gb|ABW14787.1| Deoxyribonuclease V [Frankia sp. EAN1pec]
Length = 225
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 95/179 (53%), Gaps = 14/179 (7%)
Query: 125 QIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRG 184
+++ ++ R PY+PG L+FRE P LL + + P++L+ DG+G+ HPR
Sbjct: 58 EVIASATAVGRAAFPYIPGLLSFREMPPLLEAWKTVLPQLAA-PPELLVCDGHGIAHPRR 116
Query: 185 FGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGV 244
FGLA H+GV NL T+GV K V + G R+ + II G G
Sbjct: 117 FGLACHLGVTLNLPTVGVAKT-QFVGEHSPPGPRR------GDRTAII----LDGEPVGA 165
Query: 245 AMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC-KYRVPEPIRQADIRSRDYLQKHQST 302
A+R T D ++ +++SVGH +LD+A V C +YR+PE R AD SR L + Q+
Sbjct: 166 ALR-TRDGVREVYVSVGHRTNLDSACRWVLELCPRYRLPETTRAADQLSRRALAEAQTA 223
>gi|289804951|ref|ZP_06535580.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 168
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 18/168 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
+L++V + + +PY+PGFL+FRE P LL+ + + ++ P +L VDG+G+ HP
Sbjct: 1 SLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQK-----PDLLFVDGHGISHP 55
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R G+ASH G+L ++ TIGV K G + L A+ + PLM G
Sbjct: 56 RRLGVASHFGLLVDVPTIGVAKK-------RLCGKFEPLSAEPGA---LSPLM-DKGEQL 104
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
RS P+FI+ GH +S D+A+ V+ K YR+PEP R AD
Sbjct: 105 AWVWRSK-ARCNPLFIATGHRVSTDSALAWVQRCMKGYRLPEPTRWAD 151
>gi|448300515|ref|ZP_21490514.1| endonuclease V [Natronorubrum tibetense GA33]
gi|445585334|gb|ELY39629.1| endonuclease V [Natronorubrum tibetense GA33]
Length = 265
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 133/269 (49%), Gaps = 40/269 (14%)
Query: 41 LASPDPAAQAQL--NQWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLK 95
L PD A L + +Q E+ + ED F ++ L N T +S E
Sbjct: 3 LPRPDLAPDGSLERDDMEALQREIADAAVFEDDFAFDPAALSNPLATASSPDEP-----P 57
Query: 96 YIGGVDMSF---SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+ GVD SF S+ D A +V + Q +++ +++ L++PY+PG LAFRE
Sbjct: 58 IVAGVDQSFLTNSEGDQDRALSAVVAM--QGGEVIERVHAVTPLEIPYIPGLLAFREGGP 115
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------ 206
+L L+ + P + + DG+G +H R G+A+HIGV+ ++ +GV K+L
Sbjct: 116 ILEALEGLS-----VDPDLFLFDGSGRIHFRQAGIATHIGVIRDVPAVGVAKSLLCGTPR 170
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVG 261
+ L +G R ++A N+ D G+ G A+++ +PD + P+++S G
Sbjct: 171 EDTENLP-AGTRVPIEA--NSRVDC-----PDGTLIGYAVQTRQYDSPDRYINPLYVSPG 222
Query: 262 HCISLDTAVMI-VKMTCKYRVPEPIRQAD 289
H + +TA I + + Y++PEP+R AD
Sbjct: 223 HRVGPETAADIALALASSYKLPEPVRLAD 251
>gi|270307932|ref|YP_003329990.1| nfi endonuclease V [Dehalococcoides sp. VS]
gi|270153824|gb|ACZ61662.1| nfi endonuclease V [Dehalococcoides sp. VS]
Length = 223
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 106/204 (51%), Gaps = 19/204 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ + G D+ +S+ + +VVL +Q++ S +PY+PG L+FRE P+L
Sbjct: 38 IHLVAGADVWYSRTS-GMGRAAVVVLSYPDMQLMEISRSEGDCHIPYIPGLLSFREMPLL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
LS + ++ P ++ +DG GL HPR G+ASH+G+ N IG K+ V T
Sbjct: 97 LSAFEGLES-----IPDLVFMDGQGLAHPRRLGIASHLGLFLNKPVIGCAKS-RLVGEYT 150
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
L DA ++++ + + G +R T + P+FISVGH I L+ A V
Sbjct: 151 -----ALADAAGSHSD-----LYHNNQLVGRVVR-TRKGVNPLFISVGHKICLEEACSWV 199
Query: 274 KMTCK-YRVPEPIRQADIRSRDYL 296
C+ YR+PEPIRQA + + + +
Sbjct: 200 VECCRGYRLPEPIRQAHLAAAELI 223
>gi|322369241|ref|ZP_08043806.1| endonuclease V [Haladaptatus paucihalophilus DX253]
gi|320550973|gb|EFW92622.1| endonuclease V [Haladaptatus paucihalophilus DX253]
Length = 283
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 58/288 (20%)
Query: 41 LASPDPAAQAQLN--QWTEIQDELKKRLITEDFFTWN---------------LPNSTTTN 83
LA P+ A A L+ + E+Q E+ I ED F ++ LP N
Sbjct: 3 LAHPEFAPDASLSREEMEELQHEVADAAIFEDAFEFDPESVRAEPTDDAQTHLPTGEDEN 62
Query: 84 TSTKEEEEVLLK-------YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRL 136
++ +V + + GVD +F + +A +V + ++V ++ +
Sbjct: 63 EGEDDDSDVAVPTESPESPVVVGVDQAFVGD---LAVSAVVAS--RDGEVVERAHAAVET 117
Query: 137 QVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLAN 196
++PY+PG L+FRE +L + + P + +VDG+G +H R G+A+HIGV+ +
Sbjct: 118 EIPYIPGLLSFREGTAILRAFEELT-----VEPDLAIVDGSGRIHFREAGIATHIGVMLD 172
Query: 197 LTTIGVGKNLHHVDGLTHSGVRQLLDAKENN--NEDIIPLMGGS------GSTWGVAMRS 248
L IGV KNL D L D E + + +P++ S G+ G A++S
Sbjct: 173 LPAIGVAKNLLCGD---------LRDPPEGHMAEGERVPVVSNSRVSAPDGTVIGYALQS 223
Query: 249 ----TPDT--LKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
PD + P+++S GH +S +TA +V C Y++PEP R+AD
Sbjct: 224 RQYPNPDKRHVNPLYVSSGHRVSAETAAELVWQLCAGYKLPEPTRRAD 271
>gi|269121930|ref|YP_003310107.1| deoxyribonuclease V [Sebaldella termitidis ATCC 33386]
gi|268615808|gb|ACZ10176.1| Deoxyribonuclease V [Sebaldella termitidis ATCC 33386]
Length = 232
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 25/206 (12%)
Query: 94 LKYIGGVDMSFSKEDPS-IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+K + GVD+ + +D A CIVV+D + ++ + +S + VPY+PGFLAFRE P+
Sbjct: 32 IKLVAGVDLGYWDQDGKHFAVCCIVVVDFHSREVKEKVWSSGEITVPYIPGFLAFRELPL 91
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG- 211
++ + P + M DGNG LH G+A+H TIG+ K+ +
Sbjct: 92 VMEAKAKLVSD-----PDIYMFDGNGYLHYTHMGIATHASFHLEKPTIGIAKSYLKIKNT 146
Query: 212 ---LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
+ + V D NN +G +R+ D +KP+F+S G+ I LDT
Sbjct: 147 EFIMPENTVGAYTDIVINN------------EVYGRVLRTRKD-VKPVFVSCGNWIELDT 193
Query: 269 AVMIVK--MTCKYRVPEPIRQADIRS 292
A+ I + + R+P P+R AD+ +
Sbjct: 194 AMEITMSFINGESRLPVPVRLADLET 219
>gi|348171837|ref|ZP_08878731.1| deoxyribonuclease V [Saccharopolyspora spinosa NRRL 18395]
Length = 284
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 87/159 (54%), Gaps = 21/159 (13%)
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PY+PG AFREAP LL L + P VL+ DG GL HPR FGLA H+G+L +
Sbjct: 144 PYIPGLFAFREAPPLLEALSRLS-----VVPDVLVCDGQGLAHPRRFGLACHLGLLTEIP 198
Query: 199 TIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
+IGVGK + G + A +++++ G A+R T +KP+F+
Sbjct: 199 SIGVGKTA--MGRYEPPGEERGEWAPLRMDDEVV----------GRALR-TQRGVKPVFV 245
Query: 259 SVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD--IRSRD 294
SVGH +LD A + +++ KYR+PE R AD R+RD
Sbjct: 246 SVGHRYTLDGARDLTLRLAAKYRLPETTRTADHLGRTRD 284
>gi|268325423|emb|CBH39011.1| probable endonuclease V [uncultured archaeon]
Length = 233
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 38/246 (15%)
Query: 48 AQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF--S 105
A +L I DE+ + + D + KE LK I G D +F
Sbjct: 9 ADTKLRALYRIHDEIASKAVIAD------------EINLKE-----LKSIAGTDQTFFYG 51
Query: 106 KEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRAN 165
+ IVVL+ +L+ + YS + + PY+ G L+FREAP ++ ++ +
Sbjct: 52 LQAEERIVSAIVVLEYPSLKFINYSYSEMPVAFPYISGLLSFREAPAIIKTFYALENK-- 109
Query: 166 HFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE 225
P +L+++ +G+ HPR GLA+++GV+ N+ TIGV K+ L SG +E
Sbjct: 110 ---PDLLVINRSGINHPRFAGLATYVGVILNVATIGVTKS-----SLCGSGKVP----RE 157
Query: 226 NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK-MTCKYRVPEP 284
++I G ++S + KPI ++ GH +SL+T++ I+K CK+++PEP
Sbjct: 158 EGEANVIKY---QDRAVGYYLKSEKGS-KPIIVAPGHKVSLETSLTIIKSCICKHKLPEP 213
Query: 285 IRQADI 290
R A +
Sbjct: 214 TRIAHL 219
>gi|456737126|gb|EMF61844.1| Endonuclease V [Stenotrophomonas maltophilia EPM1]
Length = 224
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ G+D+ F + V+LD +TLQ V ++ + + +PY+PG L+FRE P L
Sbjct: 38 VRWLAGLDVGFENNGATTRAAA-VLLDAKTLQPVAQEIARIPTVMPYIPGLLSFRELPAL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L + + P+++ +DG+G+ HPR G+A+H+GV+ +L +IGV K+ L
Sbjct: 97 LAALALLPR-----TPELVFIDGHGISHPRRLGVAAHLGVVTDLPSIGVAKS-----KLV 146
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
V +A + PL+ G G +RS KP+F++ GH ++ DTA+ V
Sbjct: 147 GRFVEPGAEAGAHT-----PLLDGD-EQLGWVLRSK-LRCKPLFVAGGHRVNADTALAWV 199
Query: 274 KMTCK-YRVPEPIRQAD 289
+ T + YR+PEP R AD
Sbjct: 200 QRTLRGYRLPEPTRLAD 216
>gi|15789623|ref|NP_279447.1| hypothetical protein VNG0363G [Halobacterium sp. NRC-1]
gi|169235335|ref|YP_001688535.1| endonuclease V [Halobacterium salinarum R1]
gi|10579981|gb|AAG18927.1| endonuclease V [Halobacterium sp. NRC-1]
gi|167726401|emb|CAP13184.1| endonuclease V [Halobacterium salinarum R1]
Length = 264
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 118/224 (52%), Gaps = 33/224 (14%)
Query: 84 TSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPG 143
T++ E V++ GVD +F ++ S++ + + D ++ + L VPYVPG
Sbjct: 59 TTSGEAAPVVV----GVDQAFRDDEVSVSA-AVAIRDGAVIERAAGNAPL---DVPYVPG 110
Query: 144 FLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVG 203
LAFRE ++ L ++ P +L+VDG+G +H R GLA+H+GVL ++ +GV
Sbjct: 111 LLAFREGSAVIDALSSLS-----VEPDLLVVDGSGRIHYRQAGLATHVGVLFDVPAVGVA 165
Query: 204 KNL------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT- 252
K+L + +G R ++A ++ + G+ G A++S TP+T
Sbjct: 166 KSLLCGTPAAALADPLPAGTRVAIEADDSMDAP-------DGAVVGYALQSRQYPTPETR 218
Query: 253 -LKPIFISVGHCISLDTAVMIVKMTC-KYRVPEPIRQADIRSRD 294
+ P+++S GH +S TA +V+ TC +Y++P P R AD + D
Sbjct: 219 HINPLYVSPGHRVSAGTAADLVEATCTQYKLPAPTRLADQYAAD 262
>gi|56404425|sp|Q9HS81.2|NFI_HALSA RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
Length = 246
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 118/224 (52%), Gaps = 33/224 (14%)
Query: 84 TSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPG 143
T++ E V++ GVD +F ++ S++ + + D ++ + L VPYVPG
Sbjct: 41 TTSGEAAPVVV----GVDQAFRDDEVSVSA-AVAIRDGAVIERAAGNAPL---DVPYVPG 92
Query: 144 FLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVG 203
LAFRE ++ L ++ P +L+VDG+G +H R GLA+H+GVL ++ +GV
Sbjct: 93 LLAFREGSAVIDALSSLS-----VEPDLLVVDGSGRIHYRQAGLATHVGVLFDVPAVGVA 147
Query: 204 KNL------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT- 252
K+L + +G R ++A ++ + G+ G A++S TP+T
Sbjct: 148 KSLLCGTPAAALADPLPAGTRVAIEADDSMDAP-------DGAVVGYALQSRQYPTPETR 200
Query: 253 -LKPIFISVGHCISLDTAVMIVKMTC-KYRVPEPIRQADIRSRD 294
+ P+++S GH +S TA +V+ TC +Y++P P R AD + D
Sbjct: 201 HINPLYVSPGHRVSAGTAADLVEATCTQYKLPAPTRLADQYAAD 244
>gi|114321673|ref|YP_743356.1| endonuclease V [Alkalilimnicola ehrlichii MLHE-1]
gi|122310867|sp|Q0A5M1.1|NFI_ALHEH RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|114228067|gb|ABI57866.1| Endonuclease V [Alkalilimnicola ehrlichii MLHE-1]
Length = 227
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 31/202 (15%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + GVD +I +VV+ L L +V + + +PYVPG L+FRE P ++
Sbjct: 40 RLVAGVDAGVVDGGRTIRA-AVVVMSLPDLAVVTQSVARAPAIMPYVPGLLSFRELPGVV 98
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L+ + P++L+ DG G+ HPR G+A+H+G++ +L IGVGK+
Sbjct: 99 RALEQLD-----VTPELLLCDGQGIAHPRRLGIAAHLGLITDLPAIGVGKS--------- 144
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTW------GVAMRSTPDTLKPIFISVGHCISLDT 268
R + +E E G + + G +RS D ++P+++S GH IS +
Sbjct: 145 ---RLVGTYREPRPEK-----GATSGLYDGHERIGTVLRSR-DHVRPLYVSPGHRISHED 195
Query: 269 AVMIVKMTC-KYRVPEPIRQAD 289
AV V C +YR+PEP R AD
Sbjct: 196 AVHWVLTCCTRYRLPEPQRAAD 217
>gi|408823116|ref|ZP_11208006.1| endonuclease V [Pseudomonas geniculata N1]
Length = 224
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 114/197 (57%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ G+D+ F +++ +I V+LD +TLQ V ++ + + +PY+PG L+FRE P L
Sbjct: 38 MRWLAGLDVGF-EDNGAITRAAAVLLDAKTLQPVAQEIARIPTVMPYIPGLLSFRELPAL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L + + + ++ VDG+G+ HPR G+A+H+GV+ +L +IGV K+ L
Sbjct: 97 LAALALLPQAPD-----LVFVDGHGISHPRRLGVAAHLGVVTDLPSIGVAKS-----KLV 146
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
V +A + PL+ G G +RS KP+F++ GH +S DTA+ V
Sbjct: 147 GRFVEPGAEAGAHT-----PLLEGD-EQLGWVLRSKV-RCKPLFVAGGHRVSADTALAWV 199
Query: 274 KMTCK-YRVPEPIRQAD 289
+ T + YR+PEP R AD
Sbjct: 200 QRTLRGYRLPEPTRLAD 216
>gi|218297165|ref|ZP_03497827.1| Deoxyribonuclease V [Thermus aquaticus Y51MC23]
gi|218242442|gb|EED08981.1| Deoxyribonuclease V [Thermus aquaticus Y51MC23]
Length = 226
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 108/206 (52%), Gaps = 19/206 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV-PYVPGFLAFREAPV 152
++ I +D S + P +A V+ DL+ + ++ ++ PYVPGFL+FREAP
Sbjct: 35 VRRIAALDASHRRGKPLLAVA--VLYDLERGPLFVGKGAVPEEELFPYVPGFLSFREAPA 92
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
L L + + P+ L+VDG G+ HPRG G+ASH+GV +L ++GV K+L + G
Sbjct: 93 YLLALKALPE-----APEALLVDGQGIAHPRGLGIASHLGVHLDLPSVGVAKSLLY--GR 145
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+ Q + L+ G RS + +P+++S GH + L+ A+
Sbjct: 146 PEGPLPQ-------ERGSAVRLLSPEDRPMGYVYRSRAEA-RPLYVSPGHRVGLEEALAF 197
Query: 273 VK-MTCKYRVPEPIRQADIRSRDYLQ 297
V+ + ++R+PEP+R A + + L+
Sbjct: 198 VRALPTRFRLPEPLRLAHLEAGRALK 223
>gi|381190830|ref|ZP_09898345.1| endonuclease V [Thermus sp. RL]
gi|380451287|gb|EIA38896.1| endonuclease V [Thermus sp. RL]
Length = 226
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 105/208 (50%), Gaps = 23/208 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIV---YEDYSLLRLQVPYVPGFLAFREA 150
++ I +D S + P +A + L+ L + + +L PYVPG L+FREA
Sbjct: 35 VRRIAALDASHKQGRPLVAVALLYDLEKGPLHVATAFLPEEALF----PYVPGLLSFREA 90
Query: 151 PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
P L L + + P+ L+VDG G+ HPRG G+ASH+GV +L ++GV K L +
Sbjct: 91 PAYLEALAALPE-----APEALLVDGQGVAHPRGLGIASHLGVHLDLPSVGVAKRLLY-- 143
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G + + + L+ G G RS +KP+++S GH + L+ A+
Sbjct: 144 GRPDAPL-------PEEKGAAVRLLXPDGRPLGYVYRSR-TGVKPLYVSPGHRVGLEEAL 195
Query: 271 MIV-KMTCKYRVPEPIRQADIRSRDYLQ 297
V ++ ++R+PEP+R A + + L+
Sbjct: 196 RFVRRLPTRFRLPEPLRLAHLEAGRALK 223
>gi|126465829|ref|YP_001040938.1| endonuclease V [Staphylothermus marinus F1]
gi|126014652|gb|ABN70030.1| Endonuclease V [Staphylothermus marinus F1]
Length = 218
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 102/198 (51%), Gaps = 28/198 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+KY+ GVD ++ K + G V+LD + ++ + + +PYVPG LAFREAP
Sbjct: 36 IKYVVGVDAAYHK---GLMYGVAVLLDFSSGNVLEHSVVIKKPPIPYVPGLLAFREAPAY 92
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+S + ++ P ++ VDG+GL HPRG G+A+HIG++ + +IGV K
Sbjct: 93 ISAVLKLRHE-----PDIIFVDGHGLSHPRGLGIATHIGLVLDKPSIGVAKK-------- 139
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
+ + +E N E + G + R + ++IS+G+ I+L+ A ++
Sbjct: 140 ----KLYGEIREINGEKYLEAHG------MIVARIIKHKGQELYISIGYKITLEDAYLLT 189
Query: 274 K--MTCKYRVPEPIRQAD 289
+T KY++P P AD
Sbjct: 190 TKLLTPKYKLPLPTAIAD 207
>gi|418031162|ref|ZP_12669647.1| endonuclease V [Bacillus subtilis subsp. subtilis str. SC-8]
gi|351472221|gb|EHA32334.1| endonuclease V [Bacillus subtilis subsp. subtilis str. SC-8]
Length = 237
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 22/210 (10%)
Query: 98 GGVDMSFSKE--DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++ +P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 42 AGVDLAYWEQNGEPYGVCS-IIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLIIE 100
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K T+
Sbjct: 101 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAK--------TYL 147
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK- 274
++ N + G +G A+R+ D +KPIF+S G+ I LD++ I
Sbjct: 148 KIKSYDFVMPENEVGAYTDILIDGEVYGRALRTRGD-VKPIFLSCGNYIDLDSSYQITMS 206
Query: 275 -MTCKYRVPEPIRQADIRS---RDYLQKHQ 300
+ + R+P P+R AD+ + R + QK+
Sbjct: 207 LINQESRLPIPVRLADLETHVLRTFYQKNH 236
>gi|300087666|ref|YP_003758188.1| deoxyribonuclease V [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527399|gb|ADJ25867.1| Deoxyribonuclease V [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 224
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 108/205 (52%), Gaps = 19/205 (9%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
++E ++ + G+D++ + + +VVL L+ V + L +PYVPG L+
Sbjct: 31 RDEPAGEVRLVAGIDVAAGRTGEN-GRAAVVVLRYPGLETVETAVFVGPLVMPYVPGLLS 89
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P++L L+ + R P +L+VDG G+ HPR G+A+H+G++ L IG K+
Sbjct: 90 FRELPLILPALERLTTR-----PNLLLVDGQGVAHPRRLGIAAHLGLITGLPAIGCAKS- 143
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
G + + D+I G G +R T +P+++SVGH +SL
Sbjct: 144 ------RLCGTAGEPGPERGSAADLI----DRGEIIGRVVR-TRFGCRPVYVSVGHRVSL 192
Query: 267 DTAV-MIVKMTCKYRVPEPIRQADI 290
+TAV ++K+ +R+PEP+R A +
Sbjct: 193 ETAVDWVLKLGQGFRLPEPVRLAHL 217
>gi|342319915|gb|EGU11860.1| hypothetical protein RTG_02105 [Rhodotorula glutinis ATCC 204091]
Length = 648
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 113/253 (44%), Gaps = 49/253 (19%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQ-VPYVPGFLAFREAPV 152
L+ + G+D+SF + VL +L+++ + L PY+ FL+FRE+ +
Sbjct: 154 LEVVAGLDISFRDGSGDEGIAVLAVLSFPSLKLLRTLSRRVSLSSTPYIHSFLSFRESDI 213
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH----- 207
+SLLD ++ QVL VDGNG HPR G A +GV + L T+G+ K H
Sbjct: 214 YISLLDELRATGGPEV-QVLFVDGNGRWHPREAGSAVAVGVKSGLPTVGIAKEYHPLHPS 272
Query: 208 ----HVDGLTHSGV---------------RQLLDAKENNNEDII----PLMGGSGST--- 241
D T+S + R+ A + D P GG S
Sbjct: 273 SSSSSADPATNSALPAPFPSNYLSSQKSMRKACHALLQHRGDWFGLRPPEPGGDASPRPS 332
Query: 242 -------------WGVAMRSTP--DTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPI 285
WG A+ S+P PI +S GH +SL T V + + T + +VPEP+
Sbjct: 333 ANSSAASQRRDDYWGAALLSSPSRSARNPIIVSPGHRLSLQTCVKLALACTGEGKVPEPV 392
Query: 286 RQADIRSRDYLQK 298
RQAD+ R+ +++
Sbjct: 393 RQADLVGRELVRQ 405
>gi|297527497|ref|YP_003669521.1| Deoxyribonuclease V [Staphylothermus hellenicus DSM 12710]
gi|297256413|gb|ADI32622.1| Deoxyribonuclease V [Staphylothermus hellenicus DSM 12710]
Length = 218
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 101/198 (51%), Gaps = 28/198 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ Y+ GVD ++ K + G V+LD Q+ ++ + + +PYVPG LAFREAP
Sbjct: 36 INYVVGVDAAYHK---GLMYGVAVLLDFQSGNVLEHSVVVKKPPIPYVPGLLAFREAPAY 92
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ + +++ P ++ VDG+GL HPRG G+A+HIG++ + TIGV K
Sbjct: 93 IPAILKLRRE-----PDIIFVDGHGLSHPRGLGIATHIGLVLDKPTIGVAKK-------- 139
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
+ + +E N E + G + R + ++IS+G+ ISL+ A ++
Sbjct: 140 ----KLYGEIREVNGEKYLEAHG------MIVARIIKHKGQELYISIGYKISLEDAFLLT 189
Query: 274 K--MTCKYRVPEPIRQAD 289
+ KY++P P AD
Sbjct: 190 TKLLAPKYKLPLPTAIAD 207
>gi|357977624|ref|ZP_09141595.1| endonuclease V, putative [Sphingomonas sp. KC8]
Length = 223
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 17/151 (11%)
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PYVPG+L FREAPVL + D + + P +++VDG G HPR G+ASH+GV+ ++
Sbjct: 74 PYVPGYLGFREAPVLAAAWDRLAGK-----PDLILVDGQGRAHPRRAGVASHLGVMLDVP 128
Query: 199 TIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
TIG K+ L V + + + ++ G +A+R+ P PI++
Sbjct: 129 TIGCAKS------LLCGAVAGAVGPQPGDRAAVV----DRGEVIAIALRTRPRA-APIYV 177
Query: 259 SVGHCISLDTAVMIVKMTCK-YRVPEPIRQA 288
SVGH +SLD+AV V C R+P PIR A
Sbjct: 178 SVGHRLSLDSAVAWVLRLCDGRRLPVPIRLA 208
>gi|355733358|gb|AES11002.1| putative dolichyl pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase [Mustela putorius furo]
Length = 101
Score = 95.1 bits (235), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 56/80 (70%)
Query: 133 LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIG 192
++ L PYV GFLAFRE P L+ + ++++ PQVL+VDGNG+LH RGFG+A H+G
Sbjct: 1 MVSLTAPYVSGFLAFREVPFLVDAVRRLREKEPRLVPQVLLVDGNGVLHHRGFGVACHLG 60
Query: 193 VLANLTTIGVGKNLHHVDGL 212
VL +L +GV K L VDGL
Sbjct: 61 VLTDLPCVGVAKKLLQVDGL 80
>gi|320101212|ref|YP_004176804.1| endonuclease V [Desulfurococcus mucosus DSM 2162]
gi|319753564|gb|ADV65322.1| Endonuclease V [Desulfurococcus mucosus DSM 2162]
Length = 224
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 105/204 (51%), Gaps = 29/204 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDL-QTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
++ + GVD ++ + GC V++D + Q+ Y + + +PYVPG LAFREAPV
Sbjct: 35 VRLVAGVDAAYGG---GVQAGCAVLVDYASSTQLAYTCH-VREPPIPYVPGLLAFREAPV 90
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+ L + + P +++VDG+GL HPR G+A+HIG++ TIGV KN + +
Sbjct: 91 YIKALRKLPEN-----PDIILVDGHGLTHPRALGIATHIGLVLGKPTIGVAKNPLYGEEK 145
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
T +G R + E + P+ G +++S+G+ I L+ AV +
Sbjct: 146 TVNGRRLITAHGVTAGEILEPVKGVK-----------------LYVSIGYLIRLEDAVTV 188
Query: 273 VK--MTCKYRVPEPIRQADIRSRD 294
VK M ++P P+ AD S++
Sbjct: 189 VKHLMKPGLKLPLPLHLADKYSKN 212
>gi|327398730|ref|YP_004339599.1| Endonuclease V [Hippea maritima DSM 10411]
gi|327181359|gb|AEA33540.1| Endonuclease V [Hippea maritima DSM 10411]
Length = 222
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 111/214 (51%), Gaps = 24/214 (11%)
Query: 94 LKYIGGVDMSFSK--EDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
++++ G+D+++ ++P++ +VV D++ IV Y + PY+P FLA+RE P
Sbjct: 28 VRFVAGIDLTYLNIWKNPTLGIAALVVWDVKEKSIVDVFYYEQEVDFPYIPTFLAYRELP 87
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
++L + + F M+DG G++HPR G+A+H GV+ ++ ++G K+ H+ G
Sbjct: 88 LVLGVFKKCNVEVDAF-----MLDGMGIIHPRKLGIAAHFGVVCDVVSLGCAKS--HLIG 140
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
+ D N D P+ G MRS + PIFIS G+ I+ +AV
Sbjct: 141 --------VYDEPANVPGDYKPVF-VENELRGFVMRSRKNA-NPIFISPGNNITSHSAVE 190
Query: 272 IVKMTCK-YRVPEPIRQADIRSRDYLQKHQSTCL 304
+ + YR+P+P R A +YLQ+++ L
Sbjct: 191 TTLLCLEGYRLPQPTRLA----HNYLQQYRRKLL 220
>gi|344211611|ref|YP_004795931.1| endonuclease V [Haloarcula hispanica ATCC 33960]
gi|343782966|gb|AEM56943.1| endonuclease V [Haloarcula hispanica ATCC 33960]
Length = 275
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 117/227 (51%), Gaps = 28/227 (12%)
Query: 75 NLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLL 134
+ P+ T S ++ + GVD +F + A IVVL + +++ ++
Sbjct: 50 DAPDDDQTTLSASTDDTTNPPLVAGVDQAFVDDR---AVSAIVVL--RNGEVIERVSAVE 104
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
R ++PY+PG L+FRE +L+ ++ P V++VDG+G +H R GLA+HIG+
Sbjct: 105 RTEIPYIPGLLSFREGGAILAAFAELEAD-----PDVVLVDGSGRIHFREAGLATHIGIT 159
Query: 195 ANLTTIGVGKNL------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS 248
++ T+GV K+L +D G R + A +++ + P G+ G A+++
Sbjct: 160 LDVPTVGVAKSLLCGAPEQSLDETYPEGTRIPIAA--DDSVETCP----DGTVIGHALQT 213
Query: 249 ----TPDT-LKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
+P+ + P+ +S GH +S TA IV+ T Y++PEP R AD
Sbjct: 214 RQYDSPNRYINPLIVSPGHRVSASTAADIVEATADGYKLPEPTRVAD 260
>gi|440731557|ref|ZP_20911566.1| endonuclease V [Xanthomonas translucens DAR61454]
gi|440372451|gb|ELQ09253.1| endonuclease V [Xanthomonas translucens DAR61454]
Length = 237
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 103/196 (52%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+++ G D+ F E I V++D TLQ + + + +PYVPG L+FRE P LL
Sbjct: 41 RWLAGFDVGFEDEG-RITRAAAVLIDANTLQPQQAEIARVPTSMPYVPGLLSFRELPALL 99
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ L +++R P ++ VDG G+ HPR G+A+H GV++ L +IGV K L
Sbjct: 100 AALALLRQR-----PDLVFVDGQGIAHPRRLGIAAHFGVISGLPSIGVAKKL-------- 146
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
+ D D P++ G T G A+RS P+ +S GH +++D+A+ +
Sbjct: 147 --LAGRYDEPGPQAGDRSPIV-HRGDTVGWALRSK-SRCNPLIVSPGHRVAVDSALEWTL 202
Query: 274 KMTCKYRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 203 RYLRGYRLPEPTRLAD 218
>gi|328949952|ref|YP_004367287.1| endonuclease V [Marinithermus hydrothermalis DSM 14884]
gi|328450276|gb|AEB11177.1| Endonuclease V [Marinithermus hydrothermalis DSM 14884]
Length = 234
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 110/202 (54%), Gaps = 25/202 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV----PYVPGFLAFRE 149
++++G +D S + + +A V+ DL+ ++ + L R+ PYVPGFL+FRE
Sbjct: 36 VRFVGALDASVRRGEDLVAAA--VLWDLEAGDVL--EVGLARVPAGAVFPYVPGFLSFRE 91
Query: 150 APVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHV 209
APV L L + + P +L+VDG G+ HPRG G+A+H+GV +L ++GV K+
Sbjct: 92 APVYLEALACLSR-----GPDLLLVDGQGIAHPRGLGIAAHLGVHLDLPSVGVAKS---- 142
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
G Q A E + +PL+ G+ G RS +KP+++S GH + + A
Sbjct: 143 ---RLCGAPQGALALEKGSA--VPLVDGA-RQIGWVYRSR-TGVKPLYVSPGHRVGMREA 195
Query: 270 VMIVK-MTCKYRVPEPIRQADI 290
+ V+ + + R+PEP+R A +
Sbjct: 196 LEFVRGLPGRTRLPEPLRTAHL 217
>gi|11497746|ref|NP_068968.1| hypothetical protein AF0129 [Archaeoglobus fulgidus DSM 4304]
gi|56404334|sp|O30108.1|NFI_ARCFU RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|2650516|gb|AAB91100.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 221
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 45/261 (17%)
Query: 49 QAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKED 108
Q L + IQ+E+ + ++ ED EE L+Y+ GVD +F ++
Sbjct: 3 QMNLEELRRIQEEMSRSVVLEDLIPL---------------EE--LEYVVGVDQAFISDE 45
Query: 109 PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PVLLSLLDNMKKRANHF 167
C V L L++V + + ++ PY+P FL FRE P + ++ + RA
Sbjct: 46 ---VVSCAVKLTFPELEVVDKAVRVEKVTFPYIPTFLMFREGEPAVNAVKGLVDDRA--- 99
Query: 168 YPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL-THSGVRQLLDAKEN 226
+MVDG+G+ HPR GLA++I + T+G+ K + + G+ +LLD E
Sbjct: 100 ---AIMVDGSGIAHPRRCGLATYIALKLRKPTVGITKKRLFGEMVEVEDGLWRLLDGSE- 155
Query: 227 NNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPI 285
T G A++S KPIFIS G IS D+A+ + + K Y++PEPI
Sbjct: 156 --------------TIGYALKSC-RRCKPIFISPGSYISPDSALELTRKCLKGYKLPEPI 200
Query: 286 RQADIRSRDYLQKHQSTCLLQ 306
R AD +++ ++ T L+
Sbjct: 201 RIADKLTKEVKRELTPTSKLK 221
>gi|28198801|ref|NP_779115.1| endonuclease V [Xylella fastidiosa Temecula1]
gi|56404409|sp|Q87CZ0.1|NFI_XYLFT RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|28056892|gb|AAO28764.1| endonuclease V [Xylella fastidiosa Temecula1]
Length = 239
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK----------YIGGVDMSFSKEDPSI 111
+K I F W+ + + E ++LK + G D+ F E +
Sbjct: 1 MKISSIDSIFAAWDGSITEARRLQSDMAERIVLKDEPNLLSEPTLLAGFDVGFEDEGRTT 60
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
V+++ L+++ + +PYVPG L+FRE P LL L + + P +
Sbjct: 61 RAAA-VLMNAGDLRLLETHVVRVPTSMPYVPGLLSFRELPALLQALTQLSR-----IPAL 114
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
+ VDG+G+ HPR G+A+H G++ NL IGV K V ++ E
Sbjct: 115 VFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKK---------RLVGDFVEPGTAFGEHT 165
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-KMTCKYRVPEPIRQAD 289
L+ G+ W A+RS KP+ IS GH +SL +A+ + YR+PEP RQAD
Sbjct: 166 PILLHGTQVGW--ALRSKMHC-KPLIISPGHKVSLHSALTWTQRCLTGYRLPEPTRQAD 221
>gi|188581652|ref|YP_001925097.1| deoxyribonuclease V [Methylobacterium populi BJ001]
gi|179345150|gb|ACB80562.1| Deoxyribonuclease V [Methylobacterium populi BJ001]
Length = 220
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+S E + ++V+ +V + PY+PG L+FRE PVL
Sbjct: 38 VRLVAGVDVSVKNER---SRAAVLVVTFPGFLLVETAVAERPTPFPYIPGLLSFREGPVL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ P V + DG G HPR G+ASH+G+ TIGVGK
Sbjct: 95 EEAFGRLRAE-----PDVFLFDGMGTAHPRRIGIASHMGLWLQRPTIGVGKT-------R 142
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
GV L ++ + +PL+ G T G +R+ T P+FIS GH + +AV ++
Sbjct: 143 LVGVNAPLPEEKGAH---VPLI-DRGETIGAVVRTRTAT-HPLFISPGHLADIPSAVELV 197
Query: 273 VKMTCKYRVPEPIRQADIRSRDY 295
+ + KYR+PEPIR A + D+
Sbjct: 198 LACSPKYRLPEPIRLAHKTAGDF 220
>gi|386085007|ref|YP_006001289.1| endonuclease V [Xylella fastidiosa subsp. fastidiosa GB514]
gi|417558587|ref|ZP_12209554.1| Deoxyinosine 3'endonuclease (endonuclease V) Nfi [Xylella
fastidiosa EB92.1]
gi|307579954|gb|ADN63923.1| endonuclease V [Xylella fastidiosa subsp. fastidiosa GB514]
gi|338178893|gb|EGO81871.1| Deoxyinosine 3'endonuclease (endonuclease V) Nfi [Xylella
fastidiosa EB92.1]
Length = 243
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK----------YIGGVDMSFSKEDPSI 111
+K I F W+ + + E ++LK + G D+ F E +
Sbjct: 5 MKISSIDSIFAAWDGSITEARRLQSDMAERIVLKDEPNLLSEPTLLAGFDVGFEDEGRTT 64
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
V+++ L+++ + +PYVPG L+FRE P LL L + + P +
Sbjct: 65 RAAA-VLMNAGDLRLLETHVVRVPTSMPYVPGLLSFRELPALLQALTQLSR-----IPAL 118
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
+ VDG+G+ HPR G+A+H G++ NL IGV K V ++ E
Sbjct: 119 VFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKK---------RLVGDFVEPGTAFGEHT 169
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-KMTCKYRVPEPIRQAD 289
L+ G+ W A+RS KP+ IS GH +SL +A+ + YR+PEP RQAD
Sbjct: 170 PILLHGTQVGW--ALRSKMHC-KPLIISPGHKVSLHSALTWTQRCLTGYRLPEPTRQAD 225
>gi|448579971|ref|ZP_21644800.1| endonuclease V [Haloferax larsenii JCM 13917]
gi|445722644|gb|ELZ74301.1| endonuclease V [Haloferax larsenii JCM 13917]
Length = 269
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 138/284 (48%), Gaps = 43/284 (15%)
Query: 42 ASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLP----------NSTTTNTSTKEEEE 91
A+PD A +A L++ + + L++R+ F +LP TT T T +
Sbjct: 4 ATPDLAPRAGLSR--DEMEALQRRVAEAAVFEDDLPFDPASVSLDDPDATTLTGTDSGSD 61
Query: 92 VLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
+ GVD +F + A +VV + ++V Y++ L +PY+PG L+FRE
Sbjct: 62 TDPPLVAGVDQAFLDD---RAVSAVVVF--RGGEVVERVYAVSDLDLPYIPGLLSFREGG 116
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----- 206
+L L ++ P +L+ DG+G +H R GLA+H+GV+ ++ +IGV K+L
Sbjct: 117 PILDALAELEHD-----PDLLVFDGSGRIHFRQAGLATHVGVVCDVPSIGVAKSLLCGTP 171
Query: 207 -HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGST----WGVAMRS----TPDTLKPIF 257
VDG + +D + +GG +T G A +S + + P++
Sbjct: 172 DEDVDGHPEGWNTPI------RADDAVDAVGGHPATPETVLGYAFQSRQYDSQPIVNPLY 225
Query: 258 ISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
+S GH +S +T V ++ ++ Y++PEP R AD + + +++
Sbjct: 226 VSPGHRLSPETTVDLVARLGGDYKLPEPTRLADAYADEVKTRYE 269
>gi|345302493|ref|YP_004824395.1| endonuclease V [Rhodothermus marinus SG0.5JP17-172]
gi|345111726|gb|AEN72558.1| Endonuclease V [Rhodothermus marinus SG0.5JP17-172]
Length = 218
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 104/203 (51%), Gaps = 25/203 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + G+D+S E A V Q L+ V + ++ PYVPG L+FRE P+L
Sbjct: 37 METVAGLDISVRGEQGRAAAVVWHVDRQQVLEHVAVEGTV---SFPYVPGLLSFREVPLL 93
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L L ++ P VLMVDG GL HPR GLA+H+GVL + +GV K+
Sbjct: 94 LQALAQLRT-----TPDVLMVDGQGLAHPRRCGLATHLGVLLDHPAVGVAKS-------- 140
Query: 214 HSGVRQLLDAKENNNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV- 270
R E E PL G G +R T ++P+++SVGH I+L+ AV
Sbjct: 141 ----RLFGRHAEPGPEKGSWTPLY-DDGEVIGAVVR-TRTGVRPVYVSVGHRITLEAAVA 194
Query: 271 MIVKMTCKYRVPEPIRQADIRSR 293
+ ++ T +YR+PEP R AD SR
Sbjct: 195 LTLRCTTRYRLPEPTRLADQLSR 217
>gi|345006771|ref|YP_004809624.1| endonuclease V [halophilic archaeon DL31]
gi|344322397|gb|AEN07251.1| Endonuclease V [halophilic archaeon DL31]
Length = 259
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 27/256 (10%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTK---EEEEVLLKYIGGV 100
PDP+ + + E+Q +L +R + D F ++ P + + + E E+ + GV
Sbjct: 10 PDPSLSREAME--ELQRKLAERAVFTDEFDFD-PAAVAVDGPVETEAEPEQTDSPIVVGV 66
Query: 101 DMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNM 160
D +F E A IV + Q +V +++ L +PY+PG LAFRE +L+ + +
Sbjct: 67 DQAFLDER---AVSAIVAI--QDGAVVERAHAVTPLDIPYIPGLLAFREGTPILAAFEEL 121
Query: 161 KKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDGLTHSGVR 218
P + + DG+G +H R G+A+HIGV+ +L ++GV K+L D T
Sbjct: 122 T-----VEPDLAVFDGSGRIHFRQAGIATHIGVMLDLPSVGVAKSLLCGTPDAPTEGRAE 176
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDTLKPIFISVGHCISLDTAVMIVK 274
+N P G+ G A +S ++ P+++S GH +S + V +V+
Sbjct: 177 GWSTPIRADNSVEAP----EGTILGHAYQSRQWDRSQSINPLYVSPGHRVSAEATVGLVE 232
Query: 275 MTCK-YRVPEPIRQAD 289
C Y++PEP R AD
Sbjct: 233 ALCAGYKLPEPTRLAD 248
>gi|448730043|ref|ZP_21712355.1| endonuclease V [Halococcus saccharolyticus DSM 5350]
gi|445794364|gb|EMA44917.1| endonuclease V [Halococcus saccharolyticus DSM 5350]
Length = 271
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 40/279 (14%)
Query: 44 PDPAA--------QAQLNQWTEIQDELK---KRLITEDFFTWNLPNSTTTNTSTKEEEEV 92
PDP+A Q ++ D+ + T D T + T TS +++
Sbjct: 10 PDPSASRETMETLQREIAATATFSDDFGFDPAAVSTADTHTLDAITDDRTATSPSHDDQP 69
Query: 93 LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+ + GVD +F + A G IV + +++ ++++ L+ PYVPG L+FREA
Sbjct: 70 I---VVGVDQAFLDD---RAVGAIVAF--RGGEVIERAHAVVDLEFPYVPGLLSFREAGA 121
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+L+ + + P + + DG+G +H R GLA+H+GV +L +GV K L L
Sbjct: 122 ILAAFERLDVE-----PDLAVFDGSGRIHYREAGLATHMGVTLDLPAVGVAKGL-----L 171
Query: 213 THSGVRQLLDAKENNN-----EDIIPLMGGSGSTWGVAMR-----STPDTLKPIFISVGH 262
+ R L D E +D + + + G A++ S + P+++S GH
Sbjct: 172 CGAPQRSLDDLSEGTRVAITADDSVETADDTDTVIGYALQTRQYDSGNRYINPVYVSAGH 231
Query: 263 CISLDTAVMIVKMTCK-YRVPEPIRQADIRSRDYLQKHQ 300
+ +TA +V+ C Y++PEP R AD + + + H
Sbjct: 232 RVGSETAADLVERLCNGYKLPEPTRLADSYADEVKRDHD 270
>gi|268324030|emb|CBH37618.1| endonuclease V [uncultured archaeon]
Length = 233
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 118/244 (48%), Gaps = 40/244 (16%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF--SKED 108
+L IQDE+ + I D + KE LK I G D +F +
Sbjct: 12 KLRALYRIQDEIASKAIIAD------------EINRKE-----LKTIAGTDQTFFYGLQA 54
Query: 109 PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFY 168
IVVL+ +L+ + YS + + PY+ G L+FREAP L +K +
Sbjct: 55 EERIVSAIVVLEYPSLKFINYSYSEMPVDFPYISGLLSFREAPATLKTFYTLKNK----- 109
Query: 169 PQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNN 228
P +L+++ G+ HPR GLA+++GV+ N+ TIGV K+ L SG +E
Sbjct: 110 PDLLIINRCGINHPRFAGLATYVGVILNVATIGVTKS-----SLCGSGE----VPREEGE 160
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC--KYRVPEPIR 286
+I G ++S + KPI I+ GH +SL+T++ I+K +C K+++PEP R
Sbjct: 161 ASVIKY---QDRAVGYYLKSKKGS-KPIIIAPGHKVSLETSLAIIK-SCIRKHKLPEPTR 215
Query: 287 QADI 290
A +
Sbjct: 216 IAHL 219
>gi|424667698|ref|ZP_18104723.1| hypothetical protein A1OC_01276 [Stenotrophomonas maltophilia
Ab55555]
gi|401069312|gb|EJP77835.1| hypothetical protein A1OC_01276 [Stenotrophomonas maltophilia
Ab55555]
Length = 228
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 113/197 (57%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ G+D+ F +++ + V+LD +TLQ V ++ + + +PY+PG L+FRE P L
Sbjct: 42 VRWLAGLDVGF-EDNGATTRAAAVLLDAKTLQPVAQEIARIPTVMPYIPGLLSFRELPAL 100
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L + + + ++ VDG+G+ HPR G+A+H+GV+ +L +IGV K+ L
Sbjct: 101 LAALALLPRAPD-----LVFVDGHGISHPRRLGVAAHLGVVTDLPSIGVAKS-----KLV 150
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
V +A + PLM G G +RS KP+F++ GH +S DTA+ V
Sbjct: 151 GRFVEPGAEAGAHT-----PLMDGD-EQLGWVLRSKL-RCKPLFVAGGHRVSADTALDWV 203
Query: 274 KMTCK-YRVPEPIRQAD 289
+ T + YR+PEP R AD
Sbjct: 204 QRTLRGYRLPEPTRLAD 220
>gi|71275791|ref|ZP_00652075.1| Deoxyribonuclease V [Xylella fastidiosa Dixon]
gi|170730229|ref|YP_001775662.1| endonuclease V [Xylella fastidiosa M12]
gi|71163369|gb|EAO13087.1| Deoxyribonuclease V [Xylella fastidiosa Dixon]
gi|71729822|gb|EAO31920.1| Deoxyribonuclease V [Xylella fastidiosa Ann-1]
gi|167965022|gb|ACA12032.1| Deoxyribonuclease V [Xylella fastidiosa M12]
Length = 243
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 29/251 (11%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK----------YIGGVDMSFSKEDPSI 111
+K I F W+ + + E ++LK + G D+ F E +
Sbjct: 5 MKISSIDSIFAGWDGSITEARRLQSDMAERIVLKDEPNLLSEPTLLAGFDVGFEDEGRTT 64
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
V+++ L+++ + +PYVPG L+FRE P LL L + + P +
Sbjct: 65 RAAA-VLMNAGDLRLLETHVVRVPTSMPYVPGLLSFRELPALLQALTQLSR-----IPAL 118
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
+ VDG+G+ HPR G+A+H G++ NL IGV K V ++ E
Sbjct: 119 VFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKK---------RLVGDFVEPGTAFGEHT 169
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-KMTCKYRVPEPIRQADI 290
L+ G+ W A+RS KP+ IS GH +SL +A+ + YR+PEP RQAD
Sbjct: 170 PILLHGTQVGW--ALRSKMHC-KPLIISPGHKVSLHSALTWTQRCLTGYRLPEPTRQADR 226
Query: 291 RSRDYLQKHQS 301
+ QK S
Sbjct: 227 LASQRGQKIAS 237
>gi|71728502|gb|EAO30661.1| Deoxyribonuclease V [Xylella fastidiosa Ann-1]
Length = 262
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK----------YIGGVDMSFSKEDPSI 111
+K I F W+ + + E ++LK + G D+ F E +
Sbjct: 24 MKISSIDSIFAAWDGSITEARRLQSDMAERIVLKDEPNLLSEPTLLAGFDVGFEDEGRTT 83
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
V+++ L+++ + +PYVPG L+FRE P LL L + + P +
Sbjct: 84 RAAA-VLMNAGDLRLLETHVVRVPTSMPYVPGLLSFRELPALLQALTQLSR-----IPAL 137
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
+ VDG+G+ HPR G+A+H G++ NL IGV K V ++ E
Sbjct: 138 VFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKK---------RLVGDFVEPGTAFGEHT 188
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-KMTCKYRVPEPIRQAD 289
L+ G+ W A+RS KP+ IS GH +SL +A+ + YR+PEP RQAD
Sbjct: 189 PILLHGTQVGW--ALRSKMHC-KPLIISPGHKVSLHSALTWTQRCLTGYRLPEPTRQAD 244
>gi|379710493|ref|YP_005265698.1| endonuclease V [Nocardia cyriacigeorgica GUH-2]
gi|374847992|emb|CCF65064.1| Endonuclease V (Deoxyinosine 3'endonuclease) (Deoxyribonuclease V)
(DNase V) [Nocardia cyriacigeorgica GUH-2]
Length = 226
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ I G+D ++ D IVV+D QTL V + PY+PG L+FRE P
Sbjct: 37 FRTIAGLDSAY--HDDGTVAAAIVVVDAQTLDTVDTAVAYGTTTFPYIPGLLSFREMPTT 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ L+ + P +++ D GL HPR FG A H+G++ L TIGV K+
Sbjct: 95 VTALEQLTT-----TPDLMVCDAQGLAHPRRFGFACHVGLVTGLPTIGVAKSAW--GDCP 147
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA-VMI 272
G + A + +I+ G +R T +KP+F+SVGH I LDTA +
Sbjct: 148 EPGPERGAQADITIDGEIV----------GRVLR-TRAGVKPVFVSVGHLIDLDTACAQV 196
Query: 273 VKMTCKYRVPEPIRQADIRSRDYLQ 297
+ +T +YR+PE R+AD R L+
Sbjct: 197 LALTPRYRLPETTRRADHLCRQALK 221
>gi|182681500|ref|YP_001829660.1| endonuclease V [Xylella fastidiosa M23]
gi|182631610|gb|ACB92386.1| Deoxyribonuclease V [Xylella fastidiosa M23]
Length = 262
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK----------YIGGVDMSFSKEDPSI 111
+K I F W+ + + E ++LK + G D+ F E +
Sbjct: 24 MKISSIDSIFAAWDGSITEARRLQSDMAERIVLKDEPNLLSEPTLLAGFDVGFEDEGRTT 83
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
V+++ L+++ + +PYVPG L+FRE P LL L + + P +
Sbjct: 84 RAAA-VLMNAGDLRLLETHVVRVPTSMPYVPGLLSFRELPALLQALTQLSR-----IPAL 137
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
+ VDG+G+ HPR G+A+H G++ NL IGV K V ++ E
Sbjct: 138 VFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKK---------RLVGDFVEPGTAFGEHT 188
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-KMTCKYRVPEPIRQAD 289
L+ G+ W A+RS KP+ IS GH +SL +A+ + YR+PEP RQAD
Sbjct: 189 PILLHGTQVGW--ALRSKMHC-KPLIISPGHKVSLHSALTWTQRCLTGYRLPEPTRQAD 244
>gi|332296474|ref|YP_004438397.1| Endonuclease V [Thermodesulfobium narugense DSM 14796]
gi|332179577|gb|AEE15266.1| Endonuclease V [Thermodesulfobium narugense DSM 14796]
Length = 228
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 104/204 (50%), Gaps = 33/204 (16%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G+D+S+ ++A VV L+ +++ S ++ PY+PGFLAFRE L++
Sbjct: 46 ILGLDVSYKN---NLAKASAVVFSLKYKEVLQTSISRCAVRFPYIPGFLAFREVKPLIAA 102
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIG------VGKNLHHVD 210
L ++ + V+MVDG G+ HPR GLA HIG + T G GK L +
Sbjct: 103 LRDITVDFD-----VVMVDGQGIAHPRRAGLACHIGYILKKPTFGCAKSRLFGKELGEL- 156
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G +L+D E T GV +R T D + P+++SVG+ I+L A+
Sbjct: 157 GPKKGSFARLVDKNE---------------TIGVVLR-TQDNVSPVYVSVGNMINLTNAI 200
Query: 271 MIVKMTCKY-RVPEPIRQADIRSR 293
I + C + R+PEP++ AD S+
Sbjct: 201 EIT-LKCSFSRIPEPLKIADKLSK 223
>gi|285018833|ref|YP_003376544.1| deoxyribonuclease v protein [Xanthomonas albilineans GPE PC73]
gi|283474051|emb|CBA16552.1| probable deoxyribonuclease v protein [Xanthomonas albilineans GPE
PC73]
Length = 237
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 101/196 (51%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+++ GVD+ F E I V+LD TLQ + + + + Y+PG L+FRE P LL
Sbjct: 40 RWLAGVDVGFEDEG-RITRAAAVLLDAHTLQPRQTEIARVPTTMAYIPGLLSFRELPALL 98
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ L +++R P ++ VDG G+ HPR G+A+H GV+ L +IGV K
Sbjct: 99 AALALLRQR-----PDLVFVDGQGIAHPRRLGIAAHFGVVTGLPSIGVAKK--------- 144
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
+ DA D P++ G G A+RS P+ +S GH +S+D+A+ +
Sbjct: 145 -SLAGHFDAPGAQAGDCSPIL-HRGEVVGWALRSKA-RCNPLIVSPGHRVSVDSALHWTQ 201
Query: 275 MTCK-YRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 202 RYLRGYRLPEPTRLAD 217
>gi|380511483|ref|ZP_09854890.1| endonuclease V [Xanthomonas sacchari NCPPB 4393]
Length = 231
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+++ G D+ F ++D + V+LD QTLQ+ + + + + YVPG L+FRE P LL
Sbjct: 34 RWLAGFDVGF-EDDGQVTRAAAVLLDAQTLQLQQAEIARVPTSMAYVPGLLSFRELPALL 92
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ LD +++R P ++ VDG G+ HPR G+A+H GV+ L +IGV K L
Sbjct: 93 AALDLLRQR-----PDLVFVDGQGIAHPRRLGIAAHFGVVTGLPSIGVAKTL-------- 139
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
+ D D P++ G G A+RS P+ +S GH +++D+A+ +
Sbjct: 140 --LAGRFDEPGPQAGDHSPIV-HRGEVVGWALRSK-LRCNPLIVSPGHRVAVDSALHWTQ 195
Query: 275 MTCK-YRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 196 RYLRGYRLPEPTRLAD 211
>gi|77747569|ref|NP_299178.2| endonuclease V [Xylella fastidiosa 9a5c]
gi|56404426|sp|Q9PC89.2|NFI_XYLFA RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
Length = 239
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK----------YIGGVDMSFSKEDPSI 111
+K I F W+ + + E ++LK + G D+ F E +
Sbjct: 1 MKISSIDSIFAGWDGSITEARRLQSDMAERIVLKDDLNLLSEPTLLAGFDVGFEDEGRTT 60
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
V+++ L+++ + +PYVPG L+FRE P LL L + + P +
Sbjct: 61 RAAA-VLMNACDLKLLETHVVRVPTSMPYVPGLLSFRELPALLQALTQLSR-----IPAL 114
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
+ VDG+G+ HPR G+A+H G++ NL IGV K V ++ E
Sbjct: 115 VFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKK---------RLVGDFVEPGTAFGEHT 165
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
L+ G+ W A+RS KP+ IS GH ISL +A+ + YR+PEP RQAD
Sbjct: 166 PILLHGTQVGW--ALRSKIRC-KPLMISPGHKISLHSALTWTQRCLNGYRLPEPTRQAD 221
>gi|389846156|ref|YP_006348395.1| endonuclease V (deoxyinosine 3'endonuclease) [Haloferax
mediterranei ATCC 33500]
gi|448616225|ref|ZP_21664935.1| endonuclease V [Haloferax mediterranei ATCC 33500]
gi|388243462|gb|AFK18408.1| endonuclease V (deoxyinosine 3'endonuclease) [Haloferax
mediterranei ATCC 33500]
gi|445750880|gb|EMA02317.1| endonuclease V [Haloferax mediterranei ATCC 33500]
Length = 265
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 125/248 (50%), Gaps = 36/248 (14%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLL-----KYIGGVDMSFSKEDPSIACGCI 116
L++R+ F LP + E E L + G+D SF + A +
Sbjct: 22 LQRRVAESAVFEDALPFDPANVSLGDPENETLTGDSDTPLVAGIDQSFLDDR---ALSAV 78
Query: 117 VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDG 176
VVL + ++V +++ L +PY+PG L+FRE +L L + P +L+ DG
Sbjct: 79 VVL--RGGEVVERVHAVTDLDLPYIPGLLSFREGGPILDALSELDTD-----PDLLVFDG 131
Query: 177 NGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVRQLLDAKENNNED 230
+G +H R GLA+H+GV+ ++ +IGV K+L +DG G R + A +D
Sbjct: 132 SGRIHFRQAGLATHLGVICDVPSIGVAKSLLCGTPDEDLDGRPE-GWRTPIRA-----DD 185
Query: 231 IIPLMGG----SGSTWGVAMRS----TPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRV 281
+ +GG +T G A +S + + P+++S GH +S +TAV +I +++ +Y++
Sbjct: 186 SVDAVGGHPATPETTIGYAFQSRQYDSRPIVNPLYVSPGHRVSAETAVDLISQLSGEYKL 245
Query: 282 PEPIRQAD 289
PEP R AD
Sbjct: 246 PEPTRLAD 253
>gi|269791968|ref|YP_003316872.1| Deoxyribonuclease V [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099603|gb|ACZ18590.1| Deoxyribonuclease V [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 221
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 109/213 (51%), Gaps = 33/213 (15%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + GVD S + D +I V+L L E +VPYVPGFL+FRE L
Sbjct: 34 RLVAGVDCS--ERDRTIRAAA-VLLSWPELTPAAEALFEGPCRVPYVPGFLSFRE---LD 87
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
S++ ++ F ++MVDG G+ HPRG G+ASH+GV N+ ++G+ K+L
Sbjct: 88 SMVRALEGLGMPF--DLVMVDGCGIAHPRGLGIASHLGVALNVPSLGISKSL-------- 137
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTW------GVAMRSTPDTLKPIFISVGHCISLDT 268
L+ + E D + + G W G A+RS +PIF++ GH I LD
Sbjct: 138 -----LVGSFEEPGPDPLSI----GPIWLNRSQVGWALRSR-RGARPIFVTPGHMIDLDG 187
Query: 269 AV-MIVKMTCKYRVPEPIRQADIRSRDYLQKHQ 300
A+ + ++ YR+PEP R AD+ S+ Q+ +
Sbjct: 188 ALDVTLRALRGYRLPEPTRLADLLSKGPCQRKK 220
>gi|384177246|ref|YP_005558631.1| endonuclease V [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349596470|gb|AEP92657.1| endonuclease V [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 176
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 115 CIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMV 174
CI+V+D T +++ + +S+ R+ VPYV GFLAFRE P+++ ++ P V +
Sbjct: 3 CIIVIDADTKEVIEKVHSMGRISVPYVSGFLAFRELPLIIEAAKKLETE-----PDVFLF 57
Query: 175 DGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPL 234
DGNG LH G+A+H TIG+ K + G + A + D
Sbjct: 58 DGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFVTPENEVGAYTDILID---- 113
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV--KMTCKYRVPEPIRQADIRS 292
G +G A+R+ D +KPIF+S G+ I L+++ I + + R+P P+R AD+ +
Sbjct: 114 ----GEVYGRALRTRRD-VKPIFLSCGNNIDLESSYQITLSLLNQESRLPIPVRLADLET 168
>gi|448303187|ref|ZP_21493137.1| endonuclease V [Natronorubrum sulfidifaciens JCM 14089]
gi|445594194|gb|ELY48361.1| endonuclease V [Natronorubrum sulfidifaciens JCM 14089]
Length = 263
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 24/258 (9%)
Query: 44 PDPAAQAQLN--QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVD 101
PD A + L + +Q E+ + ED F ++ + +E + + GVD
Sbjct: 6 PDLAPDSGLERAEMEALQREIADAAVFEDEFRFDPSTLGDPLAAASSPDETPI--VAGVD 63
Query: 102 MSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNM 160
SF + D V+ +Q +++ +++ L++PY+PG LAFRE +L L+ +
Sbjct: 64 QSFLTNTDGEQDRALSAVVAMQGGEVLERVHAVTPLEIPYIPGLLAFREGGPILEALEAL 123
Query: 161 KKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTH--S 215
P + + DG+G +H R G+A+HIGV+ ++ IGV K+L D L + +
Sbjct: 124 S-----VEPDLFLFDGSGRIHFRQAGIATHIGVVRDVPAIGVAKSLLCGSPQDDLENLEA 178
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR---STPDTLKPIFISVGHCISLDTAVMI 272
G R ++A + L+G + V R S+ + P+++S GH + DTA I
Sbjct: 179 GTRVPIEANARVDAPDGTLLG-----YAVQTRQYESSNRYINPLYVSPGHRVGPDTAADI 233
Query: 273 V-KMTCKYRVPEPIRQAD 289
V ++ Y++PEP+R AD
Sbjct: 234 VLALSDSYKLPEPVRLAD 251
>gi|313127220|ref|YP_004037490.1| endonuclease V [Halogeometricum borinquense DSM 11551]
gi|448288308|ref|ZP_21479508.1| endonuclease V [Halogeometricum borinquense DSM 11551]
gi|312293585|gb|ADQ68045.1| Endonuclease V [Halogeometricum borinquense DSM 11551]
gi|445569827|gb|ELY24397.1| endonuclease V [Halogeometricum borinquense DSM 11551]
Length = 255
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 108/215 (50%), Gaps = 28/215 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD +F + IVV T +V +++ L++PY+PG L+FRE +++
Sbjct: 58 VAGVDQAFLDD---RGVSAIVVARGDT--VVERVHAVTDLEIPYIPGLLSFREGGPIVAA 112
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVD 210
+ + P +L+ DG+G +H R GLA+H+GV+ + ++GV K+L VD
Sbjct: 113 FEKLSCD-----PDLLVFDGSGRIHFRQAGLATHLGVVFDKPSVGVAKSLLCGHPTEDVD 167
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDTLKPIFISVGHCISL 266
G ++L N D SG G A +S T + P+++S GH +S+
Sbjct: 168 GRPEGWRAEILADDSVENAD-------SGDPIGHAFQSRQYDTEPIINPLYVSPGHRVSV 220
Query: 267 DTAVMIVKMTC-KYRVPEPIRQADIRSRDYLQKHQ 300
TA +V C Y++PEP RQAD + D +++
Sbjct: 221 PTATTLVSQLCGGYKLPEPTRQADAYADDVKAEYR 255
>gi|92113278|ref|YP_573206.1| endonuclease V [Chromohalobacter salexigens DSM 3043]
gi|91796368|gb|ABE58507.1| Endonuclease V [Chromohalobacter salexigens DSM 3043]
Length = 237
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 97/197 (49%), Gaps = 10/197 (5%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I GVD+ F ++D +VVLD +L + ++PY+PG L+FRE P L
Sbjct: 40 IAGVDIGF-EDDGETTRAAVVVLDWPSLAVCESVVHREPTRMPYIPGLLSFREIPAALGA 98
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLT 213
+ + +P ++MVDG G+ HPR G+ASH+G+ ++ T+GV K + H + T
Sbjct: 99 FERLAA-----HPDLVMVDGQGIAHPRRLGVASHLGLWLDVPTLGVAKKVLCGRHGEVPT 153
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
G L + + + G AM + + +KP+ +S GH + TA+
Sbjct: 154 TRGAWTPLTDRRRAEDPADVEVDAEGRVVIGAMLRSRENVKPVIVSPGHRLDQATALEWA 213
Query: 273 VKMTCKYRVPEPIRQAD 289
+ + ++PEP R AD
Sbjct: 214 IACLGRTKLPEPTRLAD 230
>gi|170740632|ref|YP_001769287.1| deoxyribonuclease V [Methylobacterium sp. 4-46]
gi|168194906|gb|ACA16853.1| Deoxyribonuclease V [Methylobacterium sp. 4-46]
Length = 221
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 102/199 (51%), Gaps = 27/199 (13%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+S KE+ S A IVV ++V + PYVPG L+FRE PVL
Sbjct: 38 VRLVAGVDVSV-KENRSHAA--IVVSTFPDFRVVETVTAERPTPFPYVPGLLSFREGPVL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDG 211
L ++ P V + DG G HPR G+ASH+G+ T+G GK + H
Sbjct: 95 EEALGRLRA-----VPDVFLFDGMGTAHPRRIGIASHMGLWLERPTVGCGKTRLVGHNAP 149
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
L +E ++ +PL+ G T G +R+ T P+FIS GH + +AV
Sbjct: 150 LP----------EEKGSQ--VPLV-HRGETIGAVVRTRTGT-HPLFISPGHRADIPSAVA 195
Query: 272 IVKMTC--KYRVPEPIRQA 288
+V + C KYR+PEPIRQA
Sbjct: 196 LV-LACAPKYRLPEPIRQA 213
>gi|350267870|ref|YP_004879177.1| endonuclease V [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349600757|gb|AEP88545.1| endonuclease V [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 238
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 22/210 (10%)
Query: 98 GGVDMSFSKED--PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++D P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQDGEPYGVCS-IIVIDADTKEVIEKVHSMGKISVPYVAGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K T+
Sbjct: 102 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAK--------TYL 148
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK- 274
++ N + G +G +R+ D +KPIF+S G+ I L+++ I
Sbjct: 149 KIKDCDFVMPENEVGAYTDIIIDGEVYGRGLRTRRD-VKPIFLSCGNHIDLESSYQITMS 207
Query: 275 -MTCKYRVPEPIRQADIRS---RDYLQKHQ 300
+ + R+P P+R AD+ + R + QK+
Sbjct: 208 LINQESRLPIPVRLADLETHILRTFYQKNH 237
>gi|108805227|ref|YP_645164.1| endonuclease V [Rubrobacter xylanophilus DSM 9941]
gi|108766470|gb|ABG05352.1| Endonuclease V [Rubrobacter xylanophilus DSM 9941]
Length = 229
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ G D+S +A + VLD L +V L+ PY+PG LAFRE P +
Sbjct: 38 VRHVAGADVSTQD---GVAYATVAVLDFPGLSVVEVRGFEAPLRFPYIPGLLAFREVPAV 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ L RA L+ D G HPR GLA H+G+ ++ T+G K+ V G
Sbjct: 95 IGAL-----RAVETPVDALICDAQGRAHPRRMGLACHVGLFVDVPTVGCAKS-RLVGGFR 148
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G + + D++ G + T + P+F+SVG+ I LD+AV +V
Sbjct: 149 EPG------EERGSVSDLV-----HGGEVVGRVVRTRRRVSPVFVSVGNRIDLDSAVELV 197
Query: 274 KMTC-KYRVPEPIRQA 288
C +YR+PEP RQA
Sbjct: 198 LACCSRYRLPEPTRQA 213
>gi|268316193|ref|YP_003289912.1| Deoxyribonuclease V [Rhodothermus marinus DSM 4252]
gi|262333727|gb|ACY47524.1| Deoxyribonuclease V [Rhodothermus marinus DSM 4252]
Length = 218
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 103/205 (50%), Gaps = 29/205 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + G+D+S E A V Q L+ V + ++ PYVPG L+FRE P+L
Sbjct: 37 METVAGLDISVRGEQGRAAAVVWHVDRQQVLEHVAVEGTV---SFPYVPGLLSFREVPLL 93
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN----LHHV 209
L L ++ P VLMVDG GL HPR GLA+H+GVL + +GV K+ H
Sbjct: 94 LQALAQLRT-----TPDVLMVDGQGLAHPRRCGLATHLGVLLDHPAVGVAKSRLFGRHAE 148
Query: 210 DGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
G L D G G +R T ++P+++SVGH ++L+ A
Sbjct: 149 PGPEKGSWAPLYD---------------DGEVIGAVVR-TRTGVRPVYVSVGHRMTLEAA 192
Query: 270 V-MIVKMTCKYRVPEPIRQADIRSR 293
V + ++ T +YR+PEP R AD SR
Sbjct: 193 VALTLRCTTRYRLPEPTRLADQLSR 217
>gi|9106985|gb|AAF84698.1|AE004009_5 endonuclease V (deoxyinosine 3'endonuclease) [Xylella fastidiosa
9a5c]
Length = 254
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK----------YIGGVDMSFSKEDPSI 111
+K I F W+ + + E ++LK + G D+ F E +
Sbjct: 16 MKISSIDSIFAGWDGSITEARRLQSDMAERIVLKDDLNLLSEPTLLAGFDVGFEDEGRTT 75
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
V+++ L+++ + +PYVPG L+FRE P LL L + + P +
Sbjct: 76 RAAA-VLMNACDLKLLETHVVRVPTSMPYVPGLLSFRELPALLQALTQLSR-----IPAL 129
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDI 231
+ VDG+G+ HPR G+A+H G++ NL IGV K V ++ E
Sbjct: 130 VFVDGHGIAHPRRLGIAAHFGLVTNLPCIGVAKK---------RLVGDFVEPGTAFGEHT 180
Query: 232 IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
L+ G+ W A+RS KP+ IS GH ISL +A+ + YR+PEP RQAD
Sbjct: 181 PILLHGTQVGW--ALRSKIRC-KPLMISPGHKISLHSALTWTQRCLNGYRLPEPTRQAD 236
>gi|433639239|ref|YP_007284999.1| deoxyinosine 3'endonuclease (endonuclease V) [Halovivax ruber
XH-70]
gi|433291043|gb|AGB16866.1| deoxyinosine 3'endonuclease (endonuclease V) [Halovivax ruber
XH-70]
Length = 297
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 124/254 (48%), Gaps = 32/254 (12%)
Query: 73 TWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDL--QTLQIVYED 130
T + P+ + + + + GVD SF D A IVVL ++V
Sbjct: 51 TADAPSDPDEAADSGDRTDGTTPLVAGVDQSFLL-DQDRALSAIVVLRPAGSEWEVVERV 109
Query: 131 YSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASH 190
+++ L++PY+PG L+FRE +L+ ++ + P + + DG+G +H R G+A+H
Sbjct: 110 HAVTPLEIPYIPGLLSFREGGAILAAVEELSAD-----PDLYLFDGSGRIHFRQAGIATH 164
Query: 191 IGVLANLTTIGVGKNL------HHVDGLTHSGVRQLLDAKEN--NNEDIIPLMGG----- 237
IGV+ + +IGV KNL +GL +G R ++A + +DI G
Sbjct: 165 IGVMLDAPSIGVAKNLLCGDPVDSTEGLA-AGERVPIEANADVEGPDDIAGDETGCEGHD 223
Query: 238 -SGSTW---GVAMRS----TPDT-LKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQ 287
+ W G A++S +P+ + P+ +S GH +S TA +++ Y++PEP R
Sbjct: 224 AADPDWPTIGYAVQSKQYDSPNRHVNPLLVSPGHRVSAATAADVVLAFAAGYKLPEPTRL 283
Query: 288 ADIRSRDYLQKHQS 301
AD + D +KH S
Sbjct: 284 ADAYANDATKKHDS 297
>gi|448419732|ref|ZP_21580576.1| endonuclease V [Halosarcina pallida JCM 14848]
gi|445674646|gb|ELZ27183.1| endonuclease V [Halosarcina pallida JCM 14848]
Length = 255
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 124/256 (48%), Gaps = 31/256 (12%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMS 103
PDPA + ++Q E+ D F ++ N + ++ E L + GVD +
Sbjct: 10 PDPALD--RGEMEDLQFEVADAADWTDAFDFDPANVSLGTEASLTGERPL---VAGVDQA 64
Query: 104 FSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKR 163
F E+ A IV++ + ++V +++ L +PY+PG L+FRE +++ + +
Sbjct: 65 FLGEE---AVSAIVLM--RGGEVVERVHAVTDLDIPYIPGLLSFREGGPIVAAFEQLSSD 119
Query: 164 ANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGV 217
P +++ DG+G +H R GLA+H+GV+ ++ ++GV KNL VDG
Sbjct: 120 -----PDLVVFDGSGRIHFRQAGLATHLGVVFDVPSVGVAKNLLCGRTAEDVDGRPEGWR 174
Query: 218 RQLLDAKENNN---EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
++ N ED I G + + + P+++S GH +S+ TA +V
Sbjct: 175 TDVVADSSVENAAPEDRI------GHAYQSRQYDSEPIINPLYVSPGHRVSVPTATELVS 228
Query: 275 MTC-KYRVPEPIRQAD 289
C Y++PEP R+AD
Sbjct: 229 RLCGGYKLPEPTREAD 244
>gi|23011487|ref|ZP_00051831.1| COG1515: Deoxyinosine 3'endonuclease (endonuclease V)
[Magnetospirillum magnetotacticum MS-1]
Length = 220
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 27/199 (13%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+S E A +VV+ +V + PY+PG L+FRE PVL
Sbjct: 38 VRLVAGVDVSVKNERSRAA---VVVVTFPGFLLVETATAERPTPFPYIPGLLSFREGPVL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ P V + DG G HPR G+ASH+G+ TIGVGK
Sbjct: 95 EEAFGRLRTE-----PDVFLFDGMGTAHPRRIGIASHMGLWLERPTIGVGKT-------- 141
Query: 214 HSGVRQLLDAKENNNEDI---IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
+L+ + +E+ +PL+ G T G +R+ T P+FIS GH + +AV
Sbjct: 142 -----RLVGSNAPLSEEKGAHVPLI-DRGETIGAVVRTRTGT-HPLFISPGHLADIPSAV 194
Query: 271 -MIVKMTCKYRVPEPIRQA 288
+++ + KYR+PEPIR A
Sbjct: 195 ELVLACSPKYRLPEPIRLA 213
>gi|419781403|ref|ZP_14307230.1| deoxyribonuclease V [Streptococcus oralis SK100]
gi|383184311|gb|EIC76830.1| deoxyribonuclease V [Streptococcus oralis SK100]
Length = 132
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 70/113 (61%), Gaps = 6/113 (5%)
Query: 100 VDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
+D+++ ++ D C+VV+DL+ LQ+V E ++VPY+PGFLAFRE P++L+ +
Sbjct: 1 MDLAYWTENDKEYGVACLVVIDLENLQVVEEVSFHDEIRVPYLPGFLAFRELPLILAAVK 60
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
+K + P + M DGN LHPR G+A+H TIG+ KN +H++G
Sbjct: 61 LLKTK-----PDLFMFDGNAYLHPRHMGIATHTSFFLGKPTIGIAKNNYHIEG 108
>gi|448589955|ref|ZP_21650014.1| endonuclease V [Haloferax elongans ATCC BAA-1513]
gi|445735070|gb|ELZ86623.1| endonuclease V [Haloferax elongans ATCC BAA-1513]
Length = 269
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 43/273 (15%)
Query: 42 ASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLP----------NSTTTNTSTKEEEE 91
A+PD A + L++ + + L++R+ F LP TT T T +
Sbjct: 4 ANPDLAPRPGLSR--DEMEALQRRVAEAAVFEDELPFDPASVALDDPGATTLTGTDASSD 61
Query: 92 VLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
I G+D +F + A +VVL + ++V Y++ L +PY+PG L+FRE
Sbjct: 62 TGPPLIAGIDQAFLDDR---AVSAVVVL--RGGEVVERAYAVSDLDLPYIPGLLSFREGG 116
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL----- 206
+L L ++ P +L+ DG+G +H R GLA+H+GV+ ++ +IGV K+L
Sbjct: 117 PILDALAKLEHD-----PDLLVFDGSGRIHFRQAGLATHVGVVCDVPSIGVAKSLLCGTP 171
Query: 207 -HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGST----WGVAMRS----TPDTLKPIF 257
VDG + +D + +GG +T G A +S + + P++
Sbjct: 172 DEDVDGHPKGWNTPI------RADDAVDAVGGHPATPETVIGYAFQSRQYDSQPIVNPLY 225
Query: 258 ISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+S GH +S +T V ++ ++ Y++PEP R AD
Sbjct: 226 VSPGHRLSPETTVDLVSRLGGDYKLPEPTRLAD 258
>gi|194364975|ref|YP_002027585.1| Deoxyribonuclease V [Stenotrophomonas maltophilia R551-3]
gi|194347779|gb|ACF50902.1| Deoxyribonuclease V [Stenotrophomonas maltophilia R551-3]
Length = 227
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 112/197 (56%), Gaps = 19/197 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++++ G+D+ F ++D + V+LD +TL V ++ + + +PY+PG L+FRE P L
Sbjct: 38 VRWLAGLDVGF-EDDGATTRAAAVLLDAKTLLPVTQEIARIPTVMPYIPGLLSFRELPAL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L + + + ++ VDG+G+ HPR G+A+H+GV+ +L +IGV K+ L
Sbjct: 97 LAALALLPRAPD-----LVFVDGHGISHPRRLGIAAHLGVVTDLPSIGVAKS-----KLV 146
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
V +A + PL+ G G +RS KP+F++ GH +S DTA+ V
Sbjct: 147 GRFVEPGAEAGSHT-----PLLDGD-EQLGWVLRSKVKC-KPLFVAGGHRVSADTALHWV 199
Query: 274 KMTCK-YRVPEPIRQAD 289
+ T + YR+PEP R AD
Sbjct: 200 QRTLRGYRLPEPTRLAD 216
>gi|433591279|ref|YP_007280775.1| deoxyinosine 3'endonuclease (endonuclease V) [Natrinema pellirubrum
DSM 15624]
gi|448333044|ref|ZP_21522262.1| endonuclease V [Natrinema pellirubrum DSM 15624]
gi|433306059|gb|AGB31871.1| deoxyinosine 3'endonuclease (endonuclease V) [Natrinema pellirubrum
DSM 15624]
gi|445624398|gb|ELY77782.1| endonuclease V [Natrinema pellirubrum DSM 15624]
Length = 263
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 129/258 (50%), Gaps = 24/258 (9%)
Query: 44 PDPAAQAQLN--QWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLKYIG 98
PD A L+ + +Q E+ ED +++ L N S E+ V+
Sbjct: 6 PDLAPDGSLSRAEMESLQREIASVATFEDDLSFDPAVLSNPLEAAASGDEQPVVV----- 60
Query: 99 GVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GVD SF + ED V+ + +++ +++ L++PY+PG L+FRE +L+ L
Sbjct: 61 GVDQSFLTNEDGEQDRALSAVVATRGGEVIERVHAVTDLEIPYIPGLLSFREGRPILAAL 120
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGV 217
+ + P + + DG+G +H R G+A+HIGV+ N+ ++GV K+L + G
Sbjct: 121 EELS-----VEPDLFLFDGSGRIHFRQAGIATHIGVVRNVPSVGVAKSL--LCGTPRENT 173
Query: 218 RQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAVMI 272
LL+ E + G+ G A+++ +P+ + P+++S GH + +TA I
Sbjct: 174 DDLLEGTTIGIEANSRVDAPDGTLLGYAVQTRQYDSPNRYINPLYVSPGHRVGPETAADI 233
Query: 273 -VKMTCKYRVPEPIRQAD 289
+ ++ Y++PEP+R AD
Sbjct: 234 ALALSSSYKLPEPVRLAD 251
>gi|386760247|ref|YP_006233464.1| YwqL [Bacillus sp. JS]
gi|384933530|gb|AFI30208.1| YwqL [Bacillus sp. JS]
Length = 238
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 108/210 (51%), Gaps = 22/210 (10%)
Query: 98 GGVDMSFSKE--DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
GVD+++ ++ +P C I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++
Sbjct: 43 AGVDLAYWEQNGEPYGVCS-IIVVDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLIIE 101
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
++ P V + DGNG LH G+A+H TIG+ K + G
Sbjct: 102 AAKKLETE-----PDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCD-- 154
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK- 274
EN ++ S +G A+R+ D +KPIF+S G+ I L+++ I
Sbjct: 155 -----FVMPENEVGAYTDILIDS-EVYGRALRTRRD-VKPIFLSCGNYIDLESSYQITMS 207
Query: 275 -MTCKYRVPEPIRQADIRS---RDYLQKHQ 300
+ + R+P P+R AD+ + R + QK+
Sbjct: 208 LINQESRLPIPVRLADLETHVLRTFYQKNH 237
>gi|410696494|gb|AFV75562.1| deoxyinosine 3'endonuclease (endonuclease V) [Thermus oshimai JL-2]
Length = 226
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQI---VYEDYSLLRLQVPYVPGFLAFREA 150
++ + +D + K P +A + L+ L + V E+ L PY+PG L+FREA
Sbjct: 35 VRRVAALDAAHKKGKPLVAVAVLYHLEKGPLFVGRGVVEETGLF----PYIPGLLSFREA 90
Query: 151 PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVD 210
P L L RA P+ L+VDG G+ HPR G+A+H+G+ +L +GV K L +
Sbjct: 91 PAYLEAL-----RALPEPPEALLVDGQGIAHPRRLGIAAHLGLHLDLPAVGVAKRLLY-- 143
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G Q +E + +PL+ G G RS +KP+ +S GH + A+
Sbjct: 144 -----GRPQGPLPEEAGSH--VPLLSPKGELLGFLYRSR-RGVKPLVVSPGHRVGPWEAL 195
Query: 271 MIVK-MTCKYRVPEPIRQADIRSRDYLQ 297
V+ + +YR+PEP+R A + + L+
Sbjct: 196 AFVRALPTRYRLPEPLRLAHLEAGKALK 223
>gi|21912560|emb|CAD21535.1| putative endonuclease [Taenia solium]
Length = 185
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 70/119 (58%), Gaps = 12/119 (10%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDL---------QTLQIVYEDYSLLRLQVPYVPGFLAF 147
+GG+D+S+SK D S+A + V+ + +TL + D + + ++VPYVP FLAF
Sbjct: 28 VGGLDISYSKNDSSLAFVGVSVVRIGDPVSETQCKTLAV---DCNRITVEVPYVPNFLAF 84
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
RE P L+ + + R P VLMVD NG LHP FG A H+GVL + T GV KNL
Sbjct: 85 REVPAYLAAVRTFEARHASLAPDVLMVDSNGTLHPLRFGAACHLGVLLDRPTFGVAKNL 143
>gi|424792514|ref|ZP_18218741.1| Deoxyribonuclease V [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422797055|gb|EKU25449.1| Deoxyribonuclease V [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 238
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 100/196 (51%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+++ G D+ F E I V++D TLQ + + + + YVPG L+FRE P LL
Sbjct: 42 RWLAGFDVGFEDEG-RITRAAAVLIDADTLQPQQAEIARVPTSMAYVPGLLSFRELPALL 100
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ L +++R P ++ VDG G+ HPR G+A+H GV+ L +IGV K L
Sbjct: 101 AALALLRQR-----PDLVFVDGQGIAHPRRLGIAAHFGVVTGLPSIGVAKKL-------- 147
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD-TAVMIV 273
+ D D P++ G T G A+RS P P+ +S GH +++D T +
Sbjct: 148 --LAGRYDEPGPQAGDRSPIV-HRGDTVGWALRSKP-RCNPLIVSPGHRVAVDSTLAWTL 203
Query: 274 KMTCKYRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 204 RYLRGYRLPEPTRLAD 219
>gi|417361999|ref|ZP_12135756.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
gi|353582526|gb|EHC43154.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Give str. S5-487]
Length = 192
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 18/179 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PNLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G + L A+ + PLM G RS P+FI+ GH +S D+A+ V+
Sbjct: 137 GKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTDSALAWVQ 190
>gi|313679462|ref|YP_004057201.1| endonuclease v [Oceanithermus profundus DSM 14977]
gi|313152177|gb|ADR36028.1| Endonuclease V [Oceanithermus profundus DSM 14977]
Length = 243
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQ--VPYVPGFLAFREAP 151
++ + +D S + P +A V+ D+ +++ + + PYVPG+L+FREAP
Sbjct: 35 VRRLAALDASIRRGGPLVAAA--VLWDVAAGRVLAVGVARVAADEVFPYVPGYLSFREAP 92
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
V L+ L+ + P L+VDG G+ HPRG G+A+H+GV L+++GV K+ +
Sbjct: 93 VYLAALEALGAE-----PDALLVDGQGIAHPRGLGIAAHLGVHTGLSSLGVAKSRLFGEP 147
Query: 212 LTHSGVRQLLDAK--ENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
+ N P + G W V R+ +KP+++S GH I ++ A
Sbjct: 148 VGALAEEAGAAVPLCAENAPVGTPCVRGRQVGWVVRTRT---RVKPVYVSPGHRIGMNEA 204
Query: 270 V-MIVKMTCKYRVPEPIRQADI 290
+ ++ + K ++PEP+RQA +
Sbjct: 205 LAAVLALPRKTKLPEPLRQAHL 226
>gi|448678011|ref|ZP_21689201.1| endonuclease V [Haloarcula argentinensis DSM 12282]
gi|445773686|gb|EMA24719.1| endonuclease V [Haloarcula argentinensis DSM 12282]
Length = 270
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 133/266 (50%), Gaps = 38/266 (14%)
Query: 44 PDPA-AQAQLNQWTEIQDELKKRLITEDFFTW---------NLPNSTTTNTSTKEEEEVL 93
PDP+ +QA++ E+Q ++ + ED + + P+S T T ++
Sbjct: 12 PDPSLSQAEME---ELQRDIAQAARFEDDLDFSPETIAPAGDAPDSDQT-TLGAGDDTTD 67
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ GVD +F + A IVVL + +++ ++ R ++PY+PG L+FRE +
Sbjct: 68 APLVAGVDQAFVDDK---AVSAIVVL--RNGEVIERVSAVERTEIPYIPGLLSFREGGAI 122
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------H 207
L+ ++ P V++VDG+G +H R GLA+HIGV ++ +GV KNL
Sbjct: 123 LAAFAELETD-----PDVVLVDGSGRIHFREAGLATHIGVTLDVPAVGVAKNLLCGTPEQ 177
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR--STPDT-LKPIFISVGHCI 264
+D G R + A +++ + P GG+ V R +P+ + P+ +S GH +
Sbjct: 178 SLDETYPEGTRIPIAA--DDSVETCP--GGTIIGHAVQTRQYDSPNRYVNPLIVSPGHRV 233
Query: 265 SLDTAVMIVKMTCK-YRVPEPIRQAD 289
S +A IV+ T Y++PEP R AD
Sbjct: 234 SASSAADIVEATADGYKLPEPTRLAD 259
>gi|269837207|ref|YP_003319435.1| Deoxyribonuclease V [Sphaerobacter thermophilus DSM 20745]
gi|269786470|gb|ACZ38613.1| Deoxyribonuclease V [Sphaerobacter thermophilus DSM 20745]
Length = 224
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 84/155 (54%), Gaps = 18/155 (11%)
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
RL PY+PG L++REAP+ L + + + P +++ DG G HPR G+A H+GV
Sbjct: 71 RLTFPYIPGLLSYREAPLCLKAIRGLAQE-----PDLILADGQGRAHPRRAGIACHLGVE 125
Query: 195 ANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLK 254
L TIGV K++ + D + PL+ G+A+R T +
Sbjct: 126 LGLPTIGVAKSI----------LVGRHDPLGEERGSVAPLV-ADDEVVGMAVR-TRTGVT 173
Query: 255 PIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQA 288
P+++SVGH I+LD AV ++ T +YR+PEP R+A
Sbjct: 174 PVYVSVGHLITLDEAVDWTLRTTTRYRLPEPSRRA 208
>gi|18312102|ref|NP_558769.1| DNA endonuclease V [Pyrobaculum aerophilum str. IM2]
gi|56404419|sp|Q8ZYP2.1|NFI_PYRAE RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|18159533|gb|AAL62951.1| DNA endonuclease V, conjectural [Pyrobaculum aerophilum str. IM2]
Length = 215
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 97/192 (50%), Gaps = 29/192 (15%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D+++S S+A G VV+ TL++V S+ R+ VPYVP FLAFRE +L
Sbjct: 31 VAGLDVAYSG---SLAFGAAVVVKRTTLEVVETACSVSRIVVPYVPTFLAFRELTPMLRA 87
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+K + P V++VDG+G+ HPR FG+ASHIGV+ TIGV K+ + + +
Sbjct: 88 YIKLKSK-----PDVILVDGHGVAHPRRFGIASHIGVVLKKPTIGVAKSRLYGEEVGD-- 140
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+L+D +I GG ++SVG +LD A +V
Sbjct: 141 --KLVDPATGEVLALIIKCGGKK-----------------YVSVGSYATLDEAAGLVAQL 181
Query: 277 CKYRVPEPIRQA 288
CK P+R A
Sbjct: 182 CKSGDVYPLRLA 193
>gi|390938661|ref|YP_006402399.1| Endonuclease V [Desulfurococcus fermentans DSM 16532]
gi|390191768|gb|AFL66824.1| Endonuclease V [Desulfurococcus fermentans DSM 16532]
Length = 219
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 103/208 (49%), Gaps = 37/208 (17%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD S+ + G V +D + ++ + +PYVPG LAFREAPV
Sbjct: 34 IRSVAGVDASYRG---GVQVGSAVFMDYRAKMLLAYTCLASKPPIPYVPGLLAFREAPVY 90
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-----LHH 208
+ L + + P +++VDG+GL HPR FG+A+HIG++ N +IGV K +
Sbjct: 91 IKALHRLPAK-----PDIILVDGHGLSHPRAFGIATHIGLVLNTPSIGVAKKPLYGEVEE 145
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
V+G R+L+ A +++ GS I++S+G+ I L+
Sbjct: 146 VNG------RKLVRAHGRIVGEVVETSQGS----------------EIYVSIGYLIRLED 183
Query: 269 AVMIVK--MTCKYRVPEPIRQADIRSRD 294
AV +V+ M ++P PI AD SR
Sbjct: 184 AVEVVRHLMEPGLKLPLPIHLADNYSRS 211
>gi|448613437|ref|ZP_21663317.1| endonuclease V [Haloferax mucosum ATCC BAA-1512]
gi|445740334|gb|ELZ91840.1| endonuclease V [Haloferax mucosum ATCC BAA-1512]
Length = 265
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 40/264 (15%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITED---FFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDM 102
P A + +Q + +R + ED F ++ T N + +V L + G+D
Sbjct: 10 PRAGLSRAEMESLQRRVAERAVFEDDLGFDPASVSLGTPKNATLSGGTDVPL--VAGIDQ 67
Query: 103 SFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKK 162
SF + A +VVL + ++V +++ L +PY+PG L+FRE +L L ++
Sbjct: 68 SFLDDR---ALSAVVVL--RGDEVVERVHAVTELDLPYIPGLLSFREGGPILDALAKLEH 122
Query: 163 RANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLT--- 213
P +L+ DG+G +H R GLA+H+GV+ ++ +IGV K+L VDG
Sbjct: 123 D-----PDLLVFDGSGRIHFRQAGLATHLGVICDVPSIGVAKSLLCGTPDEAVDGRPEGW 177
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSG---STWGVAMRS----TPDTLKPIFISVGHCISL 266
H+ +R + D+ + G S +T G A +S + + P+++S GH ++
Sbjct: 178 HTPIRA--------DGDVDSVGGHSATAETTLGYAFQSRQYDSRPIVNPLYVSPGHRVAA 229
Query: 267 DTAVMIVK-MTCKYRVPEPIRQAD 289
+TAV +V ++ Y++PEP R AD
Sbjct: 230 ETAVHLVSNLSGGYKLPEPTRLAD 253
>gi|87310750|ref|ZP_01092877.1| O6-methylguanine-DNA methyltransferase/endonuclease V
[Blastopirellula marina DSM 3645]
gi|87286507|gb|EAQ78414.1| O6-methylguanine-DNA methyltransferase/endonuclease V
[Blastopirellula marina DSM 3645]
Length = 348
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D+S+ ++ +A V+ D + ++V+ + + PY+ +L++RE P+ L++
Sbjct: 147 VAGLDISYHGDEGVVA---YVLFDYGSRELVWSHLARRPVFFPYITSYLSYRELPLHLAV 203
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L + H VL+VDG+G+LHPR G+AS + L L TIGV K H+ G
Sbjct: 204 LAEAAQ--AHRLADVLLVDGSGVLHPRRCGIASMLSALTGLPTIGVTKK--HLSG----- 254
Query: 217 VRQLLDAKENNNEDIIPLMGGS--GST-WGVAMRSTPDTLKPIFISVGHCISLDTAVMI- 272
A + + E L S GST WG A+ T T +PIF+S G + D A I
Sbjct: 255 ---SFSANDLSTERFCDLRVASEDGSTKWGAAILPTKKTKRPIFVSPGGSVDFDDAEAIC 311
Query: 273 VKMTCKYRVPEPIRQADIRSR 293
R+P PI AD SR
Sbjct: 312 AHFMVGKRLPTPIAAADHLSR 332
>gi|386743077|ref|YP_006216256.1| endonuclease V [Providencia stuartii MRSN 2154]
gi|384479770|gb|AFH93565.1| endonuclease V [Providencia stuartii MRSN 2154]
Length = 199
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 18/174 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ ++ I VL LQ+V + + Q+PY+PG L+FRE P L++
Sbjct: 30 FIGGADVGFEQQG-TVTRAVIAVLSWPDLQLVEYQIARIPTQLPYIPGLLSFREVPGLMA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ H P++++VDG G+ HPR FG+A H G+ A++ TIGV K+ + D
Sbjct: 89 AWQQL-----HHKPELVLVDGQGIAHPRRFGVACHFGLQADVPTIGVAKSRLYGD----- 138
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
+A PL G G +RS P+FIS GH +S+ +
Sbjct: 139 -----YEAVNEAPGSFQPLRHGEDQL-GWVLRSK-KRCNPLFISPGHKMSVSAS 185
>gi|297623605|ref|YP_003705039.1| Deoxyribonuclease V [Truepera radiovictrix DSM 17093]
gi|297164785|gb|ADI14496.1| Deoxyribonuclease V [Truepera radiovictrix DSM 17093]
Length = 234
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 21/200 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + +D S + +P +A + L + + V + PYVPGFL+FREAP
Sbjct: 34 VRKVAALDASSRRGEPLVAAAVLWDLAEERVLEVSVAATPPEGLFPYVPGFLSFREAPTY 93
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L + + P +L+VDG G+ HPRG G+A+H+GV +L ++GV K+L +
Sbjct: 94 LAALAALSE-----VPDLLLVDGQGVAHPRGLGIAAHLGVHLDLPSLGVAKSLLY----- 143
Query: 214 HSGVRQLLDAKENNNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
GV A E E +PL S + G RS +KP+++S GH + L +
Sbjct: 144 --GV----PAGELPEEAGSAVPLTARS-AQLGWVYRSR-ARVKPLYLSPGHRLGLREGLE 195
Query: 272 IVK-MTCKYRVPEPIRQADI 290
+++ + ++PEP+RQA +
Sbjct: 196 LIRALPAPTKLPEPLRQAHL 215
>gi|448733133|ref|ZP_21715378.1| endonuclease V [Halococcus salifodinae DSM 8989]
gi|445802867|gb|EMA53167.1| endonuclease V [Halococcus salifodinae DSM 8989]
Length = 281
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 28/214 (13%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD +F + A G IV L + +++ ++++ L+ PYVPG L+FRE +L+ +
Sbjct: 83 GVDQAFLDDR---AVGAIVAL--RGGEVIERAHAVVDLEFPYVPGLLSFRETGAILAAFE 137
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGL 212
N+ P + + DG+G +H R GLA+H+GV +L +GV K L +D L
Sbjct: 138 NLD-----VEPDLAVFDGSGRIHYREAGLATHMGVTLDLPAVGVAKGLLCGAPQGSLDDL 192
Query: 213 THSGVRQLLDAKEN--NNEDIIPLMGGSGSTWGVAMR---STPDTLKPIFISVGHCISLD 267
G R + A ++ +D+ ++G + + R S + P+++S GH + D
Sbjct: 193 PE-GTRVAIAANDSVETADDVDTVIG-----YALQTRQYDSGNRHINPVYVSAGHRVGGD 246
Query: 268 TAVMIVKMTCK-YRVPEPIRQADIRSRDYLQKHQ 300
TA +V+ C Y++PEP R AD + + + H
Sbjct: 247 TAADLVERLCDGYKLPEPTRLADSYADEVKRDHS 280
>gi|292654889|ref|YP_003534786.1| endonuclease V [Haloferax volcanii DS2]
gi|448292893|ref|ZP_21483214.1| endonuclease V [Haloferax volcanii DS2]
gi|291372800|gb|ADE05027.1| endonuclease V [Haloferax volcanii DS2]
gi|445571868|gb|ELY26411.1| endonuclease V [Haloferax volcanii DS2]
Length = 274
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 137/273 (50%), Gaps = 39/273 (14%)
Query: 42 ASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLP-NSTTTNTSTKEEEEVLLK----- 95
A PD A + L++ + + L++R+ F +LP +S + ++ E E L
Sbjct: 4 ARPDLAPRPGLSR--DEMESLQRRVAETAVFADDLPFDSAAVSLASPETEHQTLAEATAL 61
Query: 96 --------YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
+ G+D SF + A +VVL + ++V + + L++PY+PG L+F
Sbjct: 62 DADADSPPLVAGIDQSFLDDR---ALSAVVVL--RGGEVVERAHVVSDLELPYIPGLLSF 116
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL- 206
RE +L L + P +L+ DG+G +H R GLA+H+GV+ + +IGV K+L
Sbjct: 117 REGGPILDALAELD-----CDPDLLVFDGSGRIHFRQAGLATHLGVVCDAPSIGVAKSLL 171
Query: 207 -----HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDTLKPIF 257
VDG G R + A +++ + + GS +T G A +S + + P++
Sbjct: 172 CGTPDEDVDGRPE-GWRTPIRA-DDSVDAVGGHPAGSETTIGYAFQSRQYDSRPVVNPLY 229
Query: 258 ISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+S GH +S T V ++ +++ Y++PEP R AD
Sbjct: 230 VSPGHRLSAATTVDLVSRLSGSYKLPEPTRLAD 262
>gi|448330905|ref|ZP_21520181.1| endonuclease V [Natrinema versiforme JCM 10478]
gi|445610741|gb|ELY64510.1| endonuclease V [Natrinema versiforme JCM 10478]
Length = 263
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 133/263 (50%), Gaps = 24/263 (9%)
Query: 44 PDPAAQAQLN--QWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLKYIG 98
PD A A L+ + +Q E+ + +D F ++ L N +S + V+
Sbjct: 6 PDLAPDADLSREEMETLQREIADVAVFDDAFAFDTDALSNPLAATSSGGQPPVVV----- 60
Query: 99 GVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
G+D SF + D V+ ++ +++ +++ L++PY+PG L+FRE +L+ L
Sbjct: 61 GIDQSFLTNADGDQDRALSAVVAMRGGEVIERVFAVTPLEIPYIPGLLSFREGAPILAAL 120
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGV 217
+ + P + + DG+G +H R G+A+H+GV+ ++ +IGV K+L + G +
Sbjct: 121 EELS-----VTPDLFLFDGSGRIHFRQAGIATHMGVVRDVPSIGVAKSL--LCGSPRGNL 173
Query: 218 RQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAVMI 272
L + E + G+ G A+++ +P+ + P+++S GH + +TA I
Sbjct: 174 EDLSEGTTVGIESNARVDAPDGTLLGYAVQTRQYESPNRYINPLYVSPGHRVGPETAADI 233
Query: 273 -VKMTCKYRVPEPIRQADIRSRD 294
+ ++ Y++PEP+R AD + D
Sbjct: 234 ALALSASYKLPEPVRLADKYADD 256
>gi|147669188|ref|YP_001214006.1| endonuclease V [Dehalococcoides sp. BAV1]
gi|259511730|sp|A5FRP8.1|NFI_DEHSB RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|146270136|gb|ABQ17128.1| Endonuclease V [Dehalococcoides sp. BAV1]
Length = 223
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ + G D+ S+ + +VVL + +V S +PY+PG L+FRE P+L
Sbjct: 38 ISLVAGADVWHSRTS-GMGRAAVVVLSYPDMNLVEVSRSEGDCHIPYIPGLLSFREMPLL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
LS + ++ P ++++DG GL HPR G+ASH+G+ N IG K+
Sbjct: 97 LSAFEGLES-----MPDLILMDGQGLAHPRRLGIASHLGLFLNKPVIGCAKS-------R 144
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G L + + D+ + G +R T + P+FISVGH I L+ A V
Sbjct: 145 LVGEYTPLADEAGSYSDLY----HNSQLVGRVLR-TRRGVNPLFISVGHKICLEEACSRV 199
Query: 274 KMTCK-YRVPEPIRQADIRSRDYL 296
C+ YR+PEP+R A + + + +
Sbjct: 200 ADCCRGYRLPEPLRHAHLAAAELI 223
>gi|428281229|ref|YP_005562964.1| hypothetical protein BSNT_05518 [Bacillus subtilis subsp. natto
BEST195]
gi|291486186|dbj|BAI87261.1| hypothetical protein BSNT_05518 [Bacillus subtilis subsp. natto
BEST195]
Length = 211
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 92/179 (51%), Gaps = 16/179 (8%)
Query: 116 IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVD 175
I+V+D T +++ + +S+ ++ VPYV GFLAFRE P+++ ++ P V + D
Sbjct: 4 IIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLIIEAAKKLETE-----PDVFLFD 58
Query: 176 GNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLM 235
GNG LH G+A+H TIG+ K + G + A + D
Sbjct: 59 GNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGYDFVMPENEVGAYTDILID----- 113
Query: 236 GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK--MTCKYRVPEPIRQADIRS 292
G +G A+R+ D +KPIF+S G+ I LD++ I + + R+P P+R AD+ +
Sbjct: 114 ---GEVYGRALRTRRD-VKPIFLSCGNYIDLDSSYQITMSLINQESRLPIPVRLADVET 168
>gi|417377305|ref|ZP_12146258.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353590362|gb|EHC48905.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
Length = 185
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 93/174 (53%), Gaps = 18/174 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
G + L A+ + + PLM G RS P+FI+ GH +S D+A
Sbjct: 137 GKFEPLSAEPSA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTDSA 185
>gi|325925974|ref|ZP_08187341.1| Endonuclease V [Xanthomonas perforans 91-118]
gi|325543639|gb|EGD15055.1| Endonuclease V [Xanthomonas perforans 91-118]
Length = 237
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 99/196 (50%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + G D+ F ++D I V+LD QTL + + + +PYVPG L+FRE P LL
Sbjct: 40 QLLAGFDVGF-EDDGQITRAAAVLLDAQTLLPLETHVARVPTSMPYVPGLLSFRELPALL 98
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 99 QALALLSR-----TPDLVFIDGQGIAHPRRLGIAAHFGVVTGLPCIGIAKQ-RLAGSFAE 152
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G E + I L+GG+ W A+RS P P+ +S GHC+S+ A+
Sbjct: 153 PG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHCVSMQGALDWTL 201
Query: 275 MTCK-YRVPEPIRQAD 289
T + YR+PEP R AD
Sbjct: 202 RTLRAYRLPEPTRLAD 217
>gi|284162188|ref|YP_003400811.1| deoxyribonuclease V [Archaeoglobus profundus DSM 5631]
gi|284012185|gb|ADB58138.1| Deoxyribonuclease V [Archaeoglobus profundus DSM 5631]
Length = 221
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 105/198 (53%), Gaps = 24/198 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
LK++ GVD +F AC V+L L++V E + ++ PY+P FL FRE
Sbjct: 29 LKFVAGVDQAFVGNKVISAC---VLLKFPRLEVVKEGVEIEDVEFPYIPTFLMFREGKPA 85
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++++ + K ++ VL+VDG+G+ HPR GLA++I + + +IG+ K
Sbjct: 86 VNVVRKVLKDVDNV---VLLVDGSGIAHPRKCGLATYIAIETGIPSIGITK--------- 133
Query: 214 HSGVRQLLDAKENNNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
R+L E+ + ++ P+ S G A++ + PI+IS G ++ +TA+
Sbjct: 134 ----RRLYGRVEDPKDVMEVKPIYDNS-EIIGYALKPCKNC-NPIYISPGSYVTPETALE 187
Query: 272 IVKMTCK-YRVPEPIRQA 288
IVK K Y++PEPIR A
Sbjct: 188 IVKACLKGYKLPEPIRLA 205
>gi|448407630|ref|ZP_21573825.1| endonuclease V [Halosimplex carlsbadense 2-9-1]
gi|445674880|gb|ELZ27415.1| endonuclease V [Halosimplex carlsbadense 2-9-1]
Length = 276
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 109/204 (53%), Gaps = 26/204 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD +F +D +++ VVL L+ ++V Y++ +PY+PG L+FRE +L+
Sbjct: 73 VAGVDQAFV-DDHAVSA---VVL-LRGGEVVERAYAVEPAAIPYIPGLLSFREGTAILAA 127
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVD 210
D +++ P + +VDG+G +H R G+A+H+GV +L T+GV K+L +D
Sbjct: 128 FDALERE-----PDIALVDGSGRIHFREAGIATHVGVTLDLPTVGVAKSLLCGTPRESLD 182
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDT---LKPIFISVGHCISLD 267
+G R ++ ++ D+ G+ V R ++ + P+ +S GH +S D
Sbjct: 183 RKLPAGARVAIE----SDADVETAEPGTHIGDAVQTRQFENSERYVNPLIVSPGHRVSAD 238
Query: 268 TAVMIVKMTCK--YRVPEPIRQAD 289
TA V + C Y++PEP R AD
Sbjct: 239 TAAD-VALACADGYKLPEPTRLAD 261
>gi|452204849|ref|YP_007484978.1| endonuclease V [Dehalococcoides mccartyi BTF08]
gi|452111905|gb|AGG07636.1| endonuclease V [Dehalococcoides mccartyi BTF08]
Length = 223
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ + G D+ S+ + +VVL + +V S +PY+PG L+FRE P+L
Sbjct: 38 ISLVAGADVWHSRTS-GMGRAAVVVLSYPDMNLVEVSRSEGDCHIPYIPGLLSFREMPLL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
LS + ++ P ++++DG GL HPR G+ASH+G+ N IG K+
Sbjct: 97 LSAFEGLES-----MPDLILMDGQGLAHPRRLGIASHLGLFLNKPVIGCAKS-------R 144
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G L + + D+ + G +R T + P+FISVGH I L+ A V
Sbjct: 145 LVGEYTPLADEAGSYSDLY----HNSQLVGRVLR-TRRGVNPLFISVGHKICLEEACSRV 199
Query: 274 KMTCK-YRVPEPIRQADI 290
C+ YR+PEP+R A +
Sbjct: 200 ADCCRGYRLPEPLRHAHL 217
>gi|417438407|ref|ZP_12161882.1| Endonuclease V [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
gi|353612653|gb|EHC64976.1| Endonuclease V [Salmonella enterica subsp. enterica serovar
Mississippi str. A4-633]
Length = 194
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 92/175 (52%), Gaps = 18/175 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G + L A+ + PLM G RS P+FI+ GH +S D+A
Sbjct: 137 GKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTDSAA 186
>gi|294505403|ref|YP_003569465.1| endonuclease V [Yersinia pestis Z176003]
gi|294355862|gb|ADE66203.1| endonuclease V [Yersinia pestis Z176003]
Length = 212
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 34/189 (17%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F + I I +L +L +V + + +PY+PG L+FRE P L
Sbjct: 41 VRFIAGADVGFEQHG-EITRAAIAILRYPSLALVEYQVARVATSLPYIPGLLSFREYPAL 99
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-------- 205
L+ +++R P +++VDG G+ HPR G+ASH G+L ++ TIGV K+
Sbjct: 100 LAAWAQLQQR-----PDLILVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGDFLP 154
Query: 206 LHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
LH G V+ L D N+E + G W +R P+FIS GH +S
Sbjct: 155 LHQDVG----AVQPLFD----NDEQL-------GWVWRSKIRCN-----PLFISPGHRVS 194
Query: 266 LDTAVMIVK 274
+ +A+ V+
Sbjct: 195 VGSALAWVQ 203
>gi|119872200|ref|YP_930207.1| endonuclease V [Pyrobaculum islandicum DSM 4184]
gi|119673608|gb|ABL87864.1| Endonuclease V [Pyrobaculum islandicum DSM 4184]
Length = 221
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 29/202 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D+++S + +A G VV+ L TLQ++ ++++ VPY+P FLAFRE +L
Sbjct: 30 VAGLDVAYSGD---LAYGVAVVVQLSTLQVIDIACAIVKSVVPYIPTFLAFRELTPMLRA 86
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
++ + P V++VDG+G+ HPR FG+ASHIGV+ T+GV K+
Sbjct: 87 YIKLRVK-----PDVILVDGHGIAHPRKFGIASHIGVVLKKPTVGVAKS----------- 130
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
L +E + PL +G +R ++SVG I+L+ AV +V+
Sbjct: 131 ---RLYGEEQRDVVTDPL---TGEVIAKVVRCGGKK----YVSVGSYITLEDAVKLVEKL 180
Query: 277 CKYRVPEPIRQADIRSRDYLQK 298
C + P+R A S+ QK
Sbjct: 181 CINKDVYPLRLAHNMSQKLKQK 202
>gi|448309425|ref|ZP_21499286.1| endonuclease V [Natronorubrum bangense JCM 10635]
gi|445590730|gb|ELY44943.1| endonuclease V [Natronorubrum bangense JCM 10635]
Length = 262
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 129/259 (49%), Gaps = 26/259 (10%)
Query: 44 PDPAAQAQLN--QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVD 101
PD A + L + +Q E+ + ED F ++ ST + + GVD
Sbjct: 5 PDLAPDSGLERAEMEALQREIADAAVFEDDFAFD--PSTLGDPLAAASSPDDPPIVAGVD 62
Query: 102 MSF-----SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
SF ++D +++ V+ ++ +++ +++ L++PY+PG LAFRE +L
Sbjct: 63 QSFLTNAEGEQDRALSA----VVAMRGGEVIERVHAVTPLEIPYIPGLLAFREGGPILEA 118
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L+ + P +L+ DG+G +H R G+A+HIGV+ ++ +GV K+L + G
Sbjct: 119 LEALS-----VDPDLLLFDGSGRIHFRQAGIATHIGVVRDVPAVGVAKSL--LCGSPRGD 171
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAVM 271
+ L + E + G+ G A+++ +P+ + P+++S GH + DTA
Sbjct: 172 LENLAEGTRVPIEANARVDAPDGTLLGYAVQTRQYDSPNRYINPLYVSPGHRVGPDTAAD 231
Query: 272 IV-KMTCKYRVPEPIRQAD 289
IV + Y++PEP+R AD
Sbjct: 232 IVLALADSYKLPEPVRLAD 250
>gi|403510595|ref|YP_006642233.1| endonuclease V [Nocardiopsis alba ATCC BAA-2165]
gi|402799234|gb|AFR06644.1| endonuclease V [Nocardiopsis alba ATCC BAA-2165]
Length = 256
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 11/185 (5%)
Query: 122 QTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLH 181
+TL++V PYV G AFRE P +L ++ + P V + DG GL H
Sbjct: 73 RTLEVVETSLVTDTPSFPYVSGLFAFRELPPVLKAIEGLS-----LTPDVFVSDGFGLAH 127
Query: 182 PRGFGLASHIGVLANLTTIGVGKNLHH----VDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
PR FG+ASH+GVL + +G K++ + G ++ + +D L
Sbjct: 128 PRRFGVASHLGVLIDARVVGSAKSVLYGRNTPPGEERGSWTPMVAGRSEIVDDTFALAEE 187
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQADIRSRDYL 296
G +R+ +P+++SVGH + L+ A +I++++ KYR+PEPIR AD Y
Sbjct: 188 GAEVIGRTLRTR-SRTRPVYVSVGHRVDLEGAADLIMRVSPKYRIPEPIRHADRLCGLYR 246
Query: 297 QKHQS 301
++H++
Sbjct: 247 KEHEA 251
>gi|417471324|ref|ZP_12167330.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
gi|353623138|gb|EHC72496.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Montevideo str. S5-403]
Length = 192
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 91/174 (52%), Gaps = 18/174 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
G + L + + PLM G RS P+FI+ GH +S DTA
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTDTA 185
>gi|355572718|ref|ZP_09043784.1| Endonuclease V [Methanolinea tarda NOBI-1]
gi|354824262|gb|EHF08515.1| Endonuclease V [Methanolinea tarda NOBI-1]
Length = 225
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 93 LLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+++ +GG D+S+ ++ A C ++L+ +L+ + +++ PYVPG+ AFRE P
Sbjct: 34 VIQTVGGADVSYGGDN---AYACFIILEYGSLRGRTRAAATSKVRFPYVPGYFAFREIPA 90
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
LL+ L R P + +V G+G HPR G+A+H+GVL + TIGV NL + G+
Sbjct: 91 LLAAL-----RLVPALPDLFLVHGHGYAHPRRAGIATHLGVLLGVPTIGVAGNL--LSGM 143
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
Q + E MGG AM T P+ IS G +L AV I
Sbjct: 144 ------QAETPPDRIGETAPVRMGGEVVG---AMVRTCQGKAPLIISPGFRTTLPDAVSI 194
Query: 273 V-KMTCKYRVPEPIRQAD 289
V T +R PEP+ AD
Sbjct: 195 VLHCTTDHRFPEPLYLAD 212
>gi|394991159|ref|ZP_10383966.1| endonuclease V [Bacillus sp. 916]
gi|393807931|gb|EJD69243.1| endonuclease V [Bacillus sp. 916]
Length = 175
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 96/177 (54%), Gaps = 16/177 (9%)
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
++D T +++ + +S+ ++ VPYV GFLAFRE P+++ + ++ P V + DGN
Sbjct: 1 MIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLIIEAAEKLEAE-----PDVFLFDGN 55
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
G LH G+A+H TIG+ K + G ++ + + DI+
Sbjct: 56 GYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDF----EMPENEVGAYTDILI---- 107
Query: 238 SGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI-VKMTCK-YRVPEPIRQADIRS 292
G +G A+R+ D +KPIF+S GH I L+++ I +KM + R+P P+R AD+ +
Sbjct: 108 DGEVYGRALRTRRD-VKPIFLSCGHNIDLESSYQITMKMINRDSRLPIPVRLADLET 163
>gi|73748408|ref|YP_307647.1| endonuclease V [Dehalococcoides sp. CBDB1]
gi|289432456|ref|YP_003462329.1| deoxyribonuclease V [Dehalococcoides sp. GT]
gi|452203413|ref|YP_007483546.1| endonuclease V [Dehalococcoides mccartyi DCMB5]
gi|123619540|sp|Q3ZWY7.1|NFI_DEHSC RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|73660124|emb|CAI82731.1| endonuclease V [Dehalococcoides sp. CBDB1]
gi|288946176|gb|ADC73873.1| Deoxyribonuclease V [Dehalococcoides sp. GT]
gi|452110472|gb|AGG06204.1| endonuclease V [Dehalococcoides mccartyi DCMB5]
Length = 223
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+ + G D+ S+ + +VVL + +V S +PY+PG L+FRE P+L
Sbjct: 38 ISLVAGADVWHSRTS-GMGRAAVVVLSYPDMNLVEVSRSEGDCHIPYIPGLLSFREMPLL 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
LS + ++ P +++DG GL HPR G+ASH+G+ N IG K+
Sbjct: 97 LSAFEGLES-----MPDFILMDGQGLAHPRRLGIASHLGLFLNKPVIGCAKS-------R 144
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
G L + + D+ + G +R T + P+FISVGH I L+ A V
Sbjct: 145 LVGEYAPLADEAGSYSDLY----HNSQLVGRVLR-TRRGVNPLFISVGHKICLEEACSRV 199
Query: 274 KMTCK-YRVPEPIRQADI 290
C+ YR+PEP+R A +
Sbjct: 200 ADCCRGYRLPEPLRHAHL 217
>gi|448582211|ref|ZP_21645715.1| endonuclease V [Haloferax gibbonsii ATCC 33959]
gi|445731859|gb|ELZ83442.1| endonuclease V [Haloferax gibbonsii ATCC 33959]
Length = 275
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 44/257 (17%)
Query: 62 LKKRLITEDFFTWNLPNSTTTNT--STKEEEEVLLKYIG-------------GVDMSFSK 106
L++R+ F +LP T + S + E E L I G+D SF
Sbjct: 22 LQRRVAEAAVFEDDLPFDPTRVSLDSPETENETLTDAIAPGGDADSPPPLVAGIDQSFLD 81
Query: 107 EDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANH 166
+ A +VVL + ++V +++ L++PY+PG L+FRE +L L + +
Sbjct: 82 D---RALSAVVVL--RGGEVVERVHAVSDLELPYIPGLLSFREGGPILDALAELDRD--- 133
Query: 167 FYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVRQL 220
P +L+ DG+G +H R GLA+H+GV+ + +IGV K+L VDG G R
Sbjct: 134 --PDLLVFDGSGRIHFRQAGLATHLGVVCDAPSIGVAKSLLCGTPDEDVDGRPE-GWRTP 190
Query: 221 LDAKENNNEDIIPLMGGSGS---TWGVAMRS----TPDTLKPIFISVGHCISLDTAV-MI 272
+ A ++ + P+ G S T G A +S + + P+++S GH +S T V ++
Sbjct: 191 IRADDS----VDPVGGHPASPETTIGYAFQSRQYDSRPIVNPLYVSPGHRLSAATTVDLV 246
Query: 273 VKMTCKYRVPEPIRQAD 289
+++ +Y++PEP R AD
Sbjct: 247 SRLSGQYKLPEPTRLAD 263
>gi|21232144|ref|NP_638061.1| endonuclease V [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66767729|ref|YP_242491.1| endonuclease V [Xanthomonas campestris pv. campestris str. 8004]
gi|56404410|sp|Q8P7A0.1|NFI_XANCP RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|81306292|sp|Q4UWV2.1|NFI_XANC8 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|21113895|gb|AAM41985.1| endonuclease V [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573061|gb|AAY48471.1| endonuclease V [Xanthomonas campestris pv. campestris str. 8004]
Length = 236
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 97/204 (47%), Gaps = 19/204 (9%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
++E + G D+ F ++D V+LD QTL + + + +PYVPG L+
Sbjct: 33 RDEVSAAPALLAGFDVGF-EDDGQTTRAAAVLLDAQTLLPLETHVARVPTSMPYVPGLLS 91
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P L P ++ +DG G+ HPR FG+A+H GV+ L +IGV K
Sbjct: 92 FRELPAL-----LRALALLARTPDLVFIDGQGIAHPRRFGIAAHFGVVTGLPSIGVAKQR 146
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
+ G E + I L +G+ G A+RS P P+ +S GH +S+
Sbjct: 147 LAGTFIEPGG--------ERGDHSPILL---AGAQIGWALRSKPRC-NPLIVSPGHRVSM 194
Query: 267 DTAVMIVKMTCK-YRVPEPIRQAD 289
A+ T + YR+PEP R AD
Sbjct: 195 QGALDWTLRTLRAYRLPEPTRLAD 218
>gi|448561158|ref|ZP_21634510.1| endonuclease V [Haloferax prahovense DSM 18310]
gi|445721390|gb|ELZ73058.1| endonuclease V [Haloferax prahovense DSM 18310]
Length = 275
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 128/257 (49%), Gaps = 44/257 (17%)
Query: 62 LKKRLITEDFFTWNLP-NSTTTNTSTKEEEEVLL--------------KYIGGVDMSFSK 106
L++R+ F +LP + T + +T E E L + G+D SF
Sbjct: 22 LQRRVAEAAVFEDDLPFDPTRVSLATPETENETLTDAIVPGGDADSPPPLVAGIDQSFLD 81
Query: 107 EDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANH 166
+ A +VVL + ++V +++ L +PYVPG L+FRE +L L +
Sbjct: 82 D---RALSAVVVL--RGDEVVERVHAVSDLDLPYVPGLLSFREGGPILDALAELD----- 131
Query: 167 FYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVRQL 220
P +L+ DG+G +H R GLA+H+GV+ + +IGV K+L VDG G R
Sbjct: 132 CDPDLLVFDGSGRIHFRQAGLATHLGVVCDAPSIGVAKSLLCGTPDEDVDGRPE-GWRTP 190
Query: 221 LDAKENNNEDIIPLMG---GSGSTWGVAMRS----TPDTLKPIFISVGHCISLDTAV-MI 272
+ A ++ + P+ G G +T G A +S + + P+++S GH +S T V ++
Sbjct: 191 IRADDS----VDPVGGHPAGPETTIGYAFQSRQYDSRPIVNPLYVSPGHRLSAATTVDLV 246
Query: 273 VKMTCKYRVPEPIRQAD 289
+++ +Y++PEP R AD
Sbjct: 247 SRLSGQYKLPEPTRLAD 263
>gi|291455328|ref|ZP_06594718.1| endonuclease V [Streptomyces albus J1074]
gi|291358277|gb|EFE85179.1| endonuclease V [Streptomyces albus J1074]
Length = 241
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 89/176 (50%), Gaps = 18/176 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TL++V E ++ + PYVPG LAFRE P +L+ L + +++ DG G+ HP
Sbjct: 73 TLEVVEEATAVGPVSFPYVPGLLAFRELPAVLAALAALTAPPG-----LVVCDGYGVAHP 127
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLASH+GVL L +GV KN + D PL GS
Sbjct: 128 RRFGLASHLGVLTGLPAVGVAKNPFTF----------TYEPPGERRGDQTPLTDGS-EEV 176
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQ 297
G A+R T +KP+++S GH + LD AV + + YR+PE R AD R L+
Sbjct: 177 GRALR-TRTAVKPVYVSAGHGVPLDRAVAHTLHLAPAYRLPETTRHADALCRAALK 231
>gi|359147701|ref|ZP_09180981.1| endonuclease V [Streptomyces sp. S4]
Length = 241
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 89/176 (50%), Gaps = 18/176 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TL++V E ++ + PYVPG LAFRE P +L+ L + +++ DG G+ HP
Sbjct: 73 TLEVVEEATAVGPVSFPYVPGLLAFRELPAVLAALAALTAPPG-----LVVCDGYGVAHP 127
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLASH+GVL L +GV KN + D PL GS
Sbjct: 128 RRFGLASHLGVLTGLPAVGVAKNPFTF----------TYEPPGERRGDQTPLTDGS-EEV 176
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQ 297
G A+R T +KP+++S GH + LD AV + + YR+PE R AD R L+
Sbjct: 177 GRALR-TRTAVKPVYVSAGHGVPLDRAVAHTLHLAPAYRLPETTRHADALCRAALK 231
>gi|435847865|ref|YP_007310115.1| deoxyinosine 3'endonuclease (endonuclease V) [Natronococcus
occultus SP4]
gi|433674133|gb|AGB38325.1| deoxyinosine 3'endonuclease (endonuclease V) [Natronococcus
occultus SP4]
Length = 263
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 133/267 (49%), Gaps = 36/267 (13%)
Query: 41 LASPD--PAAQAQLNQWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLK 95
++ PD P A + ++ +Q E+ + ED ++ L + +TS +
Sbjct: 3 VSRPDLVPDASLERSEMETLQREIADAAVFEDALEFDPAVLGDPLVASTSEDDP-----P 57
Query: 96 YIGGVDMSFSKEDPSIACGCI-VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ GVD SF D + V+ +Q +++ +++ L +PY+PG L+FRE ++
Sbjct: 58 IVAGVDQSFLTNDAGDQDRALSAVVAVQGDEVIERVHAVTPLSIPYIPGLLSFREGAPII 117
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HH 208
L+ + P +L+ DG+G +H R G+A+H+GV+ ++ +IG+ K+L
Sbjct: 118 DALEELS-----VEPDLLLFDGSGRIHFRQAGIATHMGVVLDVPSIGIAKSLLCGSPRED 172
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHC 263
V+ L G R ++A N+ D G+ G A+++ +PD + P+++S GH
Sbjct: 173 VENLPE-GTRVPIEA--NSRVD-----AAEGTLLGYAVQTRQYDSPDRHINPLYVSPGHR 224
Query: 264 ISLDTAVMIVKMT-CKYRVPEPIRQAD 289
+ +TA + T Y++P+P+R AD
Sbjct: 225 VGPETAADVALATSSSYKLPDPVRLAD 251
>gi|421738476|ref|ZP_16176833.1| deoxyinosine 3'endonuclease (endonuclease V), partial [Streptomyces
sp. SM8]
gi|406693124|gb|EKC96788.1| deoxyinosine 3'endonuclease (endonuclease V), partial [Streptomyces
sp. SM8]
Length = 237
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 89/176 (50%), Gaps = 18/176 (10%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHP 182
TL++V E ++ + PYVPG LAFRE P +L+ L + +++ DG G+ HP
Sbjct: 69 TLEVVEEATAVGPVSFPYVPGLLAFRELPAVLAALAALTAPPG-----LVVCDGYGVAHP 123
Query: 183 RGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTW 242
R FGLASH+GVL L +GV KN + D PL GS
Sbjct: 124 RRFGLASHLGVLTGLPAVGVAKNPFTF----------TYEPPGERRGDQTPLTDGS-EEV 172
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVM-IVKMTCKYRVPEPIRQADIRSRDYLQ 297
G A+R T +KP+++S GH + LD AV + + YR+PE R AD R L+
Sbjct: 173 GRALR-TRAAVKPVYVSAGHGVPLDRAVAHTLHLAPAYRLPETTRHADALCRAALK 227
>gi|213026907|ref|ZP_03341354.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 133
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 82/150 (54%), Gaps = 18/150 (12%)
Query: 138 VPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANL 197
+PY+PGFL+FRE P LL+ + + ++ P +L VDG+G+ HPR G+ASH G+L ++
Sbjct: 1 MPYIPGFLSFREYPALLAAWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDV 55
Query: 198 TTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIF 257
TIGV K G + L A+ + PLM G RS P+F
Sbjct: 56 PTIGVAKK-------RLCGKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSK-ARCNPLF 103
Query: 258 ISVGHCISLDTAVMIVKMTCK-YRVPEPIR 286
I+ GH +S D+A+ V+ K YR+PEP R
Sbjct: 104 IATGHRVSTDSALAWVQRCMKGYRLPEPTR 133
>gi|448530983|ref|ZP_21620817.1| endonuclease V [Halorubrum hochstenium ATCC 700873]
gi|445707423|gb|ELZ59277.1| endonuclease V [Halorubrum hochstenium ATCC 700873]
Length = 286
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 82 TNTSTKEEEEVLLKYIGGVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPY 140
T + ++ + + G+D +F + D + + + ++ + L +PY
Sbjct: 68 TESGAGDDHDPDAPVVAGIDQAFLTDRDDAPDAAVSAAVAFRDGDVIEYASATTPLSIPY 127
Query: 141 VPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTI 200
VPG LAFRE +L+ LD + P +L+ DG+G +H R GLA+H+GVL + ++
Sbjct: 128 VPGLLAFREGDSILAALDRLDAD-----PDLLICDGSGRIHFREAGLATHVGVLRDAPSV 182
Query: 201 GVGKNL--HHVDGLT-------HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS--- 248
GV KNL D T + VR D E G+ G A +S
Sbjct: 183 GVAKNLLCGEPDEPTDERPEGWQTPVRA--DGAVTTAE--------PGTAIGHAFQSRQY 232
Query: 249 -TPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
T + P+++S GH +S +TAV +V C Y++PEP R AD
Sbjct: 233 PTSRRVNPLYVSPGHRVSAETAVDLVAALCAGYKLPEPTRFAD 275
>gi|448353181|ref|ZP_21541958.1| endonuclease V [Natrialba hulunbeirensis JCM 10989]
gi|445640758|gb|ELY93844.1| endonuclease V [Natrialba hulunbeirensis JCM 10989]
Length = 257
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 113/204 (55%), Gaps = 26/204 (12%)
Query: 99 GVDMSFSKEDPSIACGCI-VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GVD SF D + V+ ++ ++V +++ L+ PY+PG L+FRE +L+ L
Sbjct: 55 GVDQSFLTNDAGDQDRALSAVVAMRGGEVVERVHAVTDLETPYIPGLLSFREGGAILAAL 114
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDG 211
+++ P +++ DG+G +H R G+A+HIGV+ ++ +IGV K+L D
Sbjct: 115 ESLAVE-----PDLILFDGSGRIHFRQAGIATHIGVVRDVPSIGVAKSLLCGRLQGETDN 169
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISL 266
L+ +G R ++A ++ + G+ G A+++ +P+ + P+++S GH +
Sbjct: 170 LS-AGTRVAIEADDSVD-------APEGTVLGYAVQTRQYDSPNRYINPLYVSPGHRVGP 221
Query: 267 DTAV-MIVKMTCKYRVPEPIRQAD 289
+TA +++ + Y++PEP+R AD
Sbjct: 222 ETAADLVLGLGGTYKLPEPVRLAD 245
>gi|289580807|ref|YP_003479273.1| deoxyribonuclease V [Natrialba magadii ATCC 43099]
gi|448284473|ref|ZP_21475733.1| endonuclease V [Natrialba magadii ATCC 43099]
gi|289530360|gb|ADD04711.1| Deoxyribonuclease V [Natrialba magadii ATCC 43099]
gi|445570808|gb|ELY25367.1| endonuclease V [Natrialba magadii ATCC 43099]
Length = 282
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 111/202 (54%), Gaps = 22/202 (10%)
Query: 99 GVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GVD SF + E V+ ++ ++V +++ L+ PY+PG L+FRE +L+ L
Sbjct: 80 GVDQSFLTNEAGDQDRALSAVVAMRGGEVVERVHAVTDLKTPYIPGLLSFREGGAILAAL 139
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDG 211
+++ P + + DG+G +H R G+A+HIGV+ ++ +IGV K+L D
Sbjct: 140 ESLT-----VEPDLFLFDGSGRIHFRQAGIATHIGVVRDVPSIGVAKSLLCGRLQGDTDN 194
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR--STPDT-LKPIFISVGHCISLDT 268
L+ +G R ++A ++ + L+G + V R +P+ + P+++S GH + +T
Sbjct: 195 LS-AGTRVAIEADDSVDAPAGTLLG-----YAVQTRQYDSPNRYINPLYVSPGHRVGPET 248
Query: 269 AV-MIVKMTCKYRVPEPIRQAD 289
A +++ + Y++PEP+R AD
Sbjct: 249 AADLVLGLAGSYKLPEPVRLAD 270
>gi|220922768|ref|YP_002498070.1| endonuclease V [Methylobacterium nodulans ORS 2060]
gi|219947375|gb|ACL57767.1| Endonuclease V [Methylobacterium nodulans ORS 2060]
Length = 221
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 27/199 (13%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD+S + A D + ++ V + PY+PG L+FRE PVL
Sbjct: 38 VRLVAGVDVSVKQNRSHAAIVVSTYPDFRVVETVTAERPT---PFPYIPGLLSFREGPVL 94
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ ++ P V + DG G HPR G+A H+G+ TIG GK
Sbjct: 95 EEALEQLRS-----GPDVFLFDGMGTAHPRRIGIACHMGLWLERPTIGCGKT-------- 141
Query: 214 HSGVRQLLDAKENNNEDI---IPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
+L+ + E+ +PL+ G T G +R+ T P+F+S GH + +AV
Sbjct: 142 -----RLVGRNDPLPEEKGAHVPLV-DRGETIGAVVRTRTGT-HPLFVSPGHLADIPSAV 194
Query: 271 -MIVKMTCKYRVPEPIRQA 288
+++ T K+R+PEPIRQA
Sbjct: 195 ALVLACTPKFRLPEPIRQA 213
>gi|448666857|ref|ZP_21685502.1| endonuclease V [Haloarcula amylolytica JCM 13557]
gi|445771988|gb|EMA23044.1| endonuclease V [Haloarcula amylolytica JCM 13557]
Length = 272
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 109/205 (53%), Gaps = 28/205 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD +F + A IVVL + +++ ++ R ++PY+PG L+FRE +L+
Sbjct: 69 VAGVDQAFVDDR---AVSAIVVL--RNDEVIERVSAVERTEIPYIPGLLSFREGGAILAA 123
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVD 210
++ P V++VDG+G +H R GLA+HIG+ ++ +GV K+L +D
Sbjct: 124 FAELEAD-----PDVVLVDGSGRIHFREAGLATHIGITLDVPAVGVAKSLLCGTPEQSLD 178
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCIS 265
G R + A +++ + P G+ G A+++ +P+ + P+ +S GH +S
Sbjct: 179 ETYPEGTRIPIAA--DDSVETCP----DGTVIGHALQTRQYDSPNRHINPLIVSPGHRVS 232
Query: 266 LDTAVMIVKMTCK-YRVPEPIRQAD 289
TA IV+ T Y++PEP R AD
Sbjct: 233 ASTAADIVEATTDGYKLPEPTRLAD 257
>gi|417535363|ref|ZP_12188860.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|353656953|gb|EHC97552.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
Length = 192
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 96/187 (51%), Gaps = 24/187 (12%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
G + L A+ + PLM G RS P+FI+ GH +S D+ +
Sbjct: 137 GKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTDSCMK---- 187
Query: 276 TCKYRVP 282
YR+P
Sbjct: 188 --GYRLP 192
>gi|296242778|ref|YP_003650265.1| deoxyribonuclease V [Thermosphaera aggregans DSM 11486]
gi|296095362|gb|ADG91313.1| Deoxyribonuclease V [Thermosphaera aggregans DSM 11486]
Length = 195
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 100/205 (48%), Gaps = 33/205 (16%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++ G D SF ++ VV D+ T +V E + +PY+PG LAFRE P
Sbjct: 16 VRFAAGFDSSFIN---NVQIAVAVVYDVATDAVVDEKVTRREALIPYIPGLLAFRELPGY 72
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-LHHVDGL 212
L L ++ + P VL+VDG+GL HPR FG+A+H+G++ +IGV K LH V
Sbjct: 73 LKTLSHLNVK-----PDVLLVDGHGLTHPRAFGIATHLGLVTKTPSIGVAKKPLHGV--- 124
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+ II G G + L ++S+G+ +SL++AV I
Sbjct: 125 ------------VDEEGYII----AHGQRLGKVLHHGKRRL---YVSIGYGLSLESAVEI 165
Query: 273 VK--MTCKYRVPEPIRQADIRSRDY 295
V+ + + +P P+ AD SR Y
Sbjct: 166 VEKLLRGETHLPIPLHYADKLSRKY 190
>gi|78048586|ref|YP_364761.1| endonuclease V [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|123584574|sp|Q3BR52.1|NFI_XANC5 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|78037016|emb|CAJ24742.1| Deoxyribonuclease V [Xanthomonas campestris pv. vesicatoria str.
85-10]
Length = 237
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + G D+ F ++D V+LD QTL + + + +PYVPG L+FRE P LL
Sbjct: 40 QLLAGFDVGF-EDDGQTTRAAAVLLDAQTLLPLETHVARVPTSMPYVPGLLSFRELPALL 98
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 99 RALALLSR-----TPDLVFIDGQGIAHPRRLGIAAHFGVVTGLPCIGIAKQ-RLAGSFAE 152
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G E + I L+GG+ W A+RS P P+ +S GHC+S+ A+
Sbjct: 153 PG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHCVSMQGALDWTL 201
Query: 275 MTCK-YRVPEPIRQAD 289
T + YR+PEP R AD
Sbjct: 202 RTLRAYRLPEPTRLAD 217
>gi|325916567|ref|ZP_08178833.1| Endonuclease V [Xanthomonas vesicatoria ATCC 35937]
gi|325537240|gb|EGD08970.1| Endonuclease V [Xanthomonas vesicatoria ATCC 35937]
Length = 237
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 99/196 (50%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + G D+ F ++D V+LD TL + + + +PYVPG L+FRE P LL
Sbjct: 40 QLLAGFDVGF-EDDGQTTRAAAVLLDATTLLPLETHVARVPTSMPYVPGLLSFRELPALL 98
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L + + P ++ VDG G+ HPR G+A+H GV+ L +IGV K + G
Sbjct: 99 QALALLSR-----TPDLVFVDGQGIAHPRKLGIAAHFGVVTGLPSIGVAK--QRLAG--- 148
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIV 273
+ +D E L+GG+ W A+RS P P+ +S GH +S+ A+ V
Sbjct: 149 ----RFVDPGPERGEHSRILLGGTQIGW--ALRSKPRC-NPLIVSPGHRVSMQGALDWTV 201
Query: 274 KMTCKYRVPEPIRQAD 289
+ YR+PEP R AD
Sbjct: 202 RTLRGYRLPEPTRLAD 217
>gi|417337974|ref|ZP_12119952.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
gi|353562844|gb|EHC29349.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Alachua str. R6-377]
Length = 184
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 91/173 (52%), Gaps = 18/173 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
G + L A+ + PLM G RS P+FI+ GH +S D+
Sbjct: 137 GKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTDS 184
>gi|417369779|ref|ZP_12140830.1| Endonuclease V [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353583547|gb|EHC43874.1| Endonuclease V [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 190
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 91/174 (52%), Gaps = 18/174 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTA 269
G + L + + PLM G RS P+FI+ GH +S D+A
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTDSA 185
>gi|126460711|ref|YP_001056989.1| endonuclease V [Pyrobaculum calidifontis JCM 11548]
gi|126250432|gb|ABO09523.1| Endonuclease V [Pyrobaculum calidifontis JCM 11548]
Length = 217
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 94/183 (51%), Gaps = 30/183 (16%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFRE-APVLLS 155
+GG+D+S++ +A G VV+ + +Q V YS+ + +PYVP FLAFRE P+L +
Sbjct: 29 VGGLDVSYAS---GLAYGVAVVVKVDDIQPVEVAYSINKSVMPYVPTFLAFREITPMLRA 85
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
L K P V++VDG+GL HPR FG+ASHIGV+ TIGV K+
Sbjct: 86 YLKLRNK------PDVILVDGHGLAHPRRFGIASHIGVVLGRPTIGVAKS---------- 129
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
L +E I P +G G +R K +ISVG +L+ A +V+
Sbjct: 130 ----RLYGEEQGEALIDP---STGEEIGRVIRCGG---KKRYISVGSHATLEDATALVEK 179
Query: 276 TCK 278
CK
Sbjct: 180 LCK 182
>gi|384428695|ref|YP_005638055.1| endonuclease V [Xanthomonas campestris pv. raphani 756C]
gi|341937798|gb|AEL07937.1| endonuclease V [Xanthomonas campestris pv. raphani 756C]
Length = 236
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
++E + G D+ F ++D V+LD QTL + + + +PYVPG L+
Sbjct: 33 RDEVSAAPALLAGFDVGF-EDDGQTTRAAAVLLDAQTLLPLETHVARVPTSMPYVPGLLS 91
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P LL L + + P ++ +DG G+ HPR FG+A+H GV+ L +IGV K
Sbjct: 92 FRELPALLRALALLSR-----TPDLVFIDGQGIAHPRRFGIAAHFGVVTGLPSIGVAKQR 146
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
+ G E + I L +G+ G A+RS P P+ +S GH +S+
Sbjct: 147 LAGTFIEPGG--------ERGDHSPILL---AGAQIGWALRSKPRC-NPLIVSPGHRVSM 194
Query: 267 DTAVMIVKMTCK-YRVPEPIRQAD 289
A+ T + YR+PEP R AD
Sbjct: 195 QGALDWTLRTLRAYRLPEPTRLAD 218
>gi|379005489|ref|YP_005261161.1| Deoxyinosine 3''endonuclease (endonuclease V) [Pyrobaculum
oguniense TE7]
gi|375160942|gb|AFA40554.1| Deoxyinosine 3''endonuclease (endonuclease V) [Pyrobaculum
oguniense TE7]
Length = 214
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 98/192 (51%), Gaps = 29/192 (15%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D+++S + +A G VV+ + L++V S+ ++ VPYVP FLAFRE +L
Sbjct: 30 VAGLDVAYSGD---VAYGTAVVVKMPALEVVDVACSVSKVAVPYVPTFLAFRELTPMLRA 86
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
++ P V++VDG+G+ HPR FG+ASH+GV+ TIGV K+ + G+ G
Sbjct: 87 YFKLRVE-----PDVILVDGHGVAHPRRFGIASHMGVVLKKPTIGVAKSRLY--GVEEGG 139
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+LLD + GG ++SVG +L+ AV IV+
Sbjct: 140 --RLLDPFTGEVLAYVVKCGGKK-----------------YVSVGSYATLEDAVRIVETL 180
Query: 277 CKYRVPEPIRQA 288
CK P+R A
Sbjct: 181 CKKGDVYPLRAA 192
>gi|188990847|ref|YP_001902857.1| endonuclease V [Xanthomonas campestris pv. campestris str. B100]
gi|226730072|sp|B0RQR6.1|NFI_XANCB RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|167732607|emb|CAP50801.1| Deoxyribonuclease V [Xanthomonas campestris pv. campestris]
Length = 236
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
++E + G D+ F E + V+LD QTL + + + +PYVPG L+
Sbjct: 33 RDEVSAAPALLAGFDVGFEDEGQTTRAAA-VLLDAQTLLPLETHVARVPTSMPYVPGLLS 91
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P LL L + + P ++ +DG G+ HPR FG+A+H GV+ L +IGV K
Sbjct: 92 FRELPALLRALALLSR-----TPDLVFIDGQGIAHPRRFGIAAHFGVVTGLPSIGVAKQR 146
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
+ G E + I L +G+ G A+RS P P+ +S GH +S+
Sbjct: 147 LAGTFIEPGG--------ERGDHSPILL---AGAQIGWALRSKPRC-NPLIVSPGHRVSM 194
Query: 267 DTAVMIVKMTCK-YRVPEPIRQAD 289
A+ T + YR+PEP R AD
Sbjct: 195 QGALDWTLRTLRAYRLPEPTRLAD 218
>gi|448369649|ref|ZP_21556201.1| endonuclease V [Natrialba aegyptia DSM 13077]
gi|445650824|gb|ELZ03740.1| endonuclease V [Natrialba aegyptia DSM 13077]
Length = 267
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 129/271 (47%), Gaps = 27/271 (9%)
Query: 44 PDPAAQAQLNQWT--EIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVD 101
PD A +L++ +Q E+ + D FT++ S T + + + G D
Sbjct: 8 PDLAPDPELDRAAMESLQREIADTAVFTDEFTFDC-ESLTNPLAASAAADADPPTVVGAD 66
Query: 102 MSFSKEDPSIACGCI-VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNM 160
SF D + V+ ++ +++ ++ L+ PY+PG L+FRE +L+ LD +
Sbjct: 67 QSFLTNDAGDQDRALSAVVAVRGGEVIERVAAVTDLETPYIPGLLSFREGGAILAALDEL 126
Query: 161 KKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL-----HHVDGLTHS 215
P + + DG+G +H R G+A+HIGV+ ++ ++GV K+L +
Sbjct: 127 SVE-----PDLFLFDGSGRIHFRQAGIATHIGVVCDVPSVGVAKSLLCGTPREETADLQT 181
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR--STPDT-LKPIFISVGHCISLDTAVMI 272
G R ++A + L+G + V R +P+ + P+++S GH I +TA I
Sbjct: 182 GTRVGIEANAKVDAPEGTLLG-----YAVQTRQYDSPNRYINPLYVSPGHRIGPETAADI 236
Query: 273 -VKMTCKYRVPEPIRQADIRS----RDYLQK 298
+ + Y++PEP+R AD + RDY+
Sbjct: 237 ALALASSYKLPEPVRLADSYATEAKRDYVDS 267
>gi|218884175|ref|YP_002428557.1| Endonuclease V [Desulfurococcus kamchatkensis 1221n]
gi|254767273|sp|B8D509.1|NFI_DESK1 RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|218765791|gb|ACL11190.1| Endonuclease V [Desulfurococcus kamchatkensis 1221n]
Length = 219
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 37/207 (17%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++ + GVD S+ + G V++D + + + +PYVPG LAFREAPV
Sbjct: 34 IRSVAGVDASYRG---GVQVGSAVLMDYRAKMPLAYTCLTSKPPIPYVPGLLAFREAPVY 90
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-----LHH 208
+ L + + P +++VDG+GL HPR FG+A+HIG++ + +IGV K +
Sbjct: 91 IKALHRLPAK-----PDIILVDGHGLSHPRAFGIATHIGLVLSTPSIGVAKKPLYGEVEE 145
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
V+G R+L+ A +++ GS I++S+G+ I L+
Sbjct: 146 VNG------RKLVRAHGRIVGEVVETNQGS----------------EIYVSIGYLIRLED 183
Query: 269 AVMIVK--MTCKYRVPEPIRQADIRSR 293
AV +V+ M ++P PI AD SR
Sbjct: 184 AVEVVRHLMEPGLKLPLPIHLADNYSR 210
>gi|206895826|ref|YP_002246849.1| endonuclease V [Coprothermobacter proteolyticus DSM 5265]
gi|206738443|gb|ACI17521.1| endonuclease V [Coprothermobacter proteolyticus DSM 5265]
Length = 221
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 106/211 (50%), Gaps = 30/211 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ D+SF + G + + + Q++Q++ + + VPYVP +LAFRE P +L+L
Sbjct: 30 VAAFDVSFQA---GLGVGVVALFNYQSVQLMECEIVVKEPYVPYVPTYLAFREMPYILAL 86
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
+ H P +L++DG+G HPRG G+A+ G+ +IGV K L D
Sbjct: 87 YKKL-----HEEPDLLLIDGHGKSHPRGMGIATQAGLSLRKPSIGVAKRLLFGD------ 135
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS-LDTAV-MIVK 274
LL+ + ++ + P + VA + P KP+FISVG +S L AV +++
Sbjct: 136 ---LLETADGSSLVVHP---ETREPLAVAYKEKP-RFKPVFISVGAGVSNLSEAVSLVLP 188
Query: 275 MTCKYRVPEPIR-------QADIRSRDYLQK 298
+ +R PEP+R Q R RD +Q+
Sbjct: 189 LFKGHREPEPLRYVHNVSLQEGRRMRDGVQQ 219
>gi|336255483|ref|YP_004598590.1| endonuclease V [Halopiger xanaduensis SH-6]
gi|335339472|gb|AEH38711.1| Endonuclease V [Halopiger xanaduensis SH-6]
Length = 301
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 138/291 (47%), Gaps = 30/291 (10%)
Query: 12 RREFHSIPEQMSSCYRSYMENYCEEEREALASPDPAAQAQLNQWTEIQDELKKRLITEDF 71
R E ++ ++++ + +++ + R ASP A+ + T + D
Sbjct: 16 REEMEALQREIAAAA-VFEDDFAFDPRAVAASP---AEPEDGAQTTLADSTAATGDAASS 71
Query: 72 FTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF-SKEDPSIACGCIVVLDLQTLQIVYED 130
+ +++ + E + GVD SF + +D V+ Q ++
Sbjct: 72 DSSGSSGDADPHSALENGTEAKPPIVAGVDQSFLTNDDGDQDRALSAVVATQAGDVIERA 131
Query: 131 YSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASH 190
++ L++PY+PG L+FRE +L+ L+ + P +L+ DG+G +H R G+A+H
Sbjct: 132 SAVTDLEIPYIPGLLSFREGKPILAALEELS-----VEPDLLLFDGSGRIHFRQAGIATH 186
Query: 191 IGVLANLTTIGVGKNL------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGV 244
+GV+ ++ ++GV K+L D L+ G R + E+N+ P G+ G
Sbjct: 187 MGVVLDVPSVGVAKSLLCGTPTEETDNLSE-GTRVPI---ESNSRVDAP----DGTLLGY 238
Query: 245 AMRS----TPDT-LKPIFISVGHCISLDTAVMI-VKMTCKYRVPEPIRQAD 289
A+++ +P+ + P+++S GH + +TA I + Y++PEP+R AD
Sbjct: 239 AVQTRQYDSPNRYINPLYVSPGHRVGPETAADIALDCATSYKLPEPVRLAD 289
>gi|305664309|ref|YP_003860597.1| Deoxyribonuclease V [Ignisphaera aggregans DSM 17230]
gi|304378878|gb|ADM28717.1| Deoxyribonuclease V [Ignisphaera aggregans DSM 17230]
Length = 220
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 89/165 (53%), Gaps = 22/165 (13%)
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
++++PY+PG LAFREAP+++ L +K+ P +LMV+G+G+ HPR G+ASH+GV+
Sbjct: 69 KVEIPYIPGLLAFREAPLMIKALIKLKEEC--IEPDILMVNGHGIAHPRRLGIASHLGVV 126
Query: 195 ANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLK 254
++ +IG+ K+ + G +D + D G G ++ +
Sbjct: 127 MDMPSIGIAKSFLY-------GYIDFIDGSKVIIVD--------GRIVGYVVKKNRNE-- 169
Query: 255 PIFISVGHCISLDTAVMIVKMTC--KYRVPEPIRQADIRSRDYLQ 297
I++S GH I+ A+ I T +R PEPI AD+ SR L+
Sbjct: 170 -IYVSAGHKIAPHQALKISLETWLDNHRFPEPIYLADMISRKMLK 213
>gi|417387297|ref|ZP_12151773.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
gi|353600790|gb|EHC56576.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Johannesburg str. S5-703]
Length = 183
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 18/172 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
G + L A+ + PLM G RS P+FI+ GH +S D
Sbjct: 137 GKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTD 183
>gi|347522757|ref|YP_004780327.1| Deoxyribonuclease V [Pyrolobus fumarii 1A]
gi|343459639|gb|AEM38075.1| Deoxyribonuclease V [Pyrolobus fumarii 1A]
Length = 237
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++YIGGVD+++ I IVV +L++ ++ VPY+PG LAFREAP+
Sbjct: 30 IEYIGGVDLAYLPGHREIGIAVIVVFTYPSLRVKEVRVAIGHPPVPYIPGLLAFREAPLA 89
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
++ + P +++VDG+G HPR G+A+HIGV + +IGV K + G
Sbjct: 90 YVAYSRLETK-----PNIIIVDGHGRAHPRKAGIATHIGVALDTPSIGVAKK--RLAG-Q 141
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
H + DA +E + ++ G K +++S GH ISL TA IV
Sbjct: 142 HCKYHNM-DALCIGDETVALILHHRG--------------KSLYVSPGHRISLMTAFSIV 186
Query: 274 KMTCKYRVPEPI 285
K + R PI
Sbjct: 187 KRLLRGRATLPI 198
>gi|20094871|ref|NP_614718.1| deoxyinosine 3'endonuclease (endonuclease V) [Methanopyrus kandleri
AV19]
gi|56404416|sp|Q8X260.1|NFI_METKA RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|18152923|gb|AAL61958.1|AF311944_4 putative endonuclease V [Methanopyrus kandleri]
gi|19888101|gb|AAM02648.1| Deoxyinosine 3'endonuclease (endonuclease V) [Methanopyrus kandleri
AV19]
Length = 229
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 103/201 (51%), Gaps = 29/201 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD+S+ E+ A VVLD +T +++ VPY PGFLAFRE P L
Sbjct: 37 VAGVDVSYRGEEYRAAA---VVLDPETYEVLDRRVVHGTTDVPYEPGFLAFREGPPALEA 93
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L+ + +L V G+G+ HPR GLASH+GV ++ TIGV +
Sbjct: 94 LEGLDF-------DLLFVHGHGVAHPRRAGLASHLGVALDVPTIGVAR------------ 134
Query: 217 VRQLLD-AKENNNE--DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM-I 272
R L+ +KE + D PL+ G G +R+ + +P+ +S GH +L+ AV
Sbjct: 135 -RPLVGRSKEEPSRIGDTTPLV-HRGEVVGYLVRTDAEA-RPVVVSPGHRCNLEDAVRWT 191
Query: 273 VKMTCKYRVPEPIRQADIRSR 293
+++ + PEP+R AD+ SR
Sbjct: 192 LRLVRVGKWPEPLRLADLLSR 212
>gi|448385516|ref|ZP_21564022.1| endonuclease V [Haloterrigena thermotolerans DSM 11522]
gi|445657011|gb|ELZ09843.1| endonuclease V [Haloterrigena thermotolerans DSM 11522]
Length = 263
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 131/262 (50%), Gaps = 32/262 (12%)
Query: 44 PDPAAQAQLN--QWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLKYIG 98
PD A L+ + +Q E+ ED F+++ L N S E V+
Sbjct: 6 PDLAPDGSLSRAEMESLQREIAAVATFEDDFSFDHAVLSNPLEATASGGERPVVV----- 60
Query: 99 GVDMSF-----SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
GVD SF ++D +++ V+ + +++ +++ L++PY+PG L+FRE +
Sbjct: 61 GVDQSFLTNAEGEQDRALSA----VVATRGGEVIERIHAVTDLEIPYIPGLLSFREGRPI 116
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
L+ L+ + P +L+ DG+G +H R G+A+HIGV+ ++ ++GV K+L + G
Sbjct: 117 LAALEELS-----VEPDLLLFDGSGRIHFRQAGIATHIGVVRDVPSVGVAKSL--LCGTP 169
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDT 268
L + E + G+ G A+++ +P+ + P+++S GH + +T
Sbjct: 170 RENTDDLPEGTTIGIEANSRVDAPDGTLLGYAVQTRQYESPNRHINPLYVSPGHRVGPET 229
Query: 269 AVMI-VKMTCKYRVPEPIRQAD 289
A + + + Y++PEP+R AD
Sbjct: 230 AAEVALALATSYKLPEPVRLAD 251
>gi|448624097|ref|ZP_21670170.1| endonuclease V [Haloferax denitrificans ATCC 35960]
gi|445750064|gb|EMA01503.1| endonuclease V [Haloferax denitrificans ATCC 35960]
Length = 296
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 111/207 (53%), Gaps = 29/207 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D SF + A +VVL + ++V +++ L +PY+PG L+FRE +L
Sbjct: 93 VAGIDQSFLDDR---ALSAVVVL--RGGEVVERVHAVSDLDLPYIPGLLSFREGGPILDA 147
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVD 210
L + P +L+ DG+G +H R GLA+H+GV+ + +IGV K+L VD
Sbjct: 148 LAELD-----CDPDLLVFDGSGRIHFRQAGLATHLGVVCDAPSIGVAKSLLCGTPDEDVD 202
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMG---GSGSTWGVAMRS----TPDTLKPIFISVGHC 263
G G R + A ++ + P+ G G +T G A +S + + P+++S GH
Sbjct: 203 GRPE-GWRTPIRADDS----VDPVGGHPDGPETTIGYAFQSRQYDSRPIVNPLYVSPGHR 257
Query: 264 ISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+S TAV ++ +++ Y++PEP R AD
Sbjct: 258 LSAATAVDLVSRLSGSYKLPEPTRLAD 284
>gi|288931331|ref|YP_003435391.1| deoxyribonuclease V [Ferroglobus placidus DSM 10642]
gi|288893579|gb|ADC65116.1| Deoxyribonuclease V [Ferroglobus placidus DSM 10642]
Length = 222
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 42/241 (17%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKE-DPS 110
+N+ E+Q ++ + ++ ED F + EE+ KY+ GVD +F K+ D
Sbjct: 1 MNKLVELQKKIAEEVVLEDAFNY---------------EEI--KYVVGVDQAFFKKGDKE 43
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQ 170
V++ L+ + L ++ PY+P FL FRE S ++ +KK
Sbjct: 44 FVVSAAVLMSFPDLRFIDSGVDLRKVDFPYIPTFLMFREGD---SAVEAVKKVLRE--KT 98
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLTHSGVRQLLDAKENNN 228
V++VDG+G+ HPR GLA+ +GV +IGV K + SG ++K N
Sbjct: 99 VIIVDGSGIAHPRKCGLATFVGVALRNPSIGVTKRPLYGKFEEPKRSG-----ESKGIFN 153
Query: 229 EDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQ 287
+++I G + R PI++S G+ IS +TA+ +V T + Y++P PIR+
Sbjct: 154 DELI------GYAYKPCARCN-----PIYVSPGNMISPETALRVVVATIRNYKLPIPIRE 202
Query: 288 A 288
A
Sbjct: 203 A 203
>gi|384418540|ref|YP_005627900.1| endonuclease V [Xanthomonas oryzae pv. oryzicola BLS256]
gi|353461454|gb|AEQ95733.1| endonuclease V [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 237
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
+E + + G D+ F ++D V+LD TL + + + +PYVPG L+F
Sbjct: 33 DEVSATPQLLAGFDVGF-EDDGQTTRAAAVLLDAHTLLPLETHVARVPTSMPYVPGLLSF 91
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE P LL L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 92 RELPALLQALALLSR-----TPDLVFIDGQGIAHPRRLGIAAHFGVVTGLPCIGIAKQ-R 145
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
G E + I L+GG+ W A+RS P P+ +S GHC+S+
Sbjct: 146 LAGSFAEPG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHCVSMQ 194
Query: 268 TAVMIVKMTCK-YRVPEPIRQAD 289
A+ T + YR+PEP R AD
Sbjct: 195 GALGWTLRTLRSYRLPEPTRLAD 217
>gi|379728440|ref|YP_005320636.1| endonuclease V [Saprospira grandis str. Lewin]
gi|378574051|gb|AFC23052.1| endonuclease V [Saprospira grandis str. Lewin]
Length = 229
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 114/206 (55%), Gaps = 29/206 (14%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQT-LQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
I +D+ + +ED +A I VL Q + VY SL + + Y P + +FRE P LL+
Sbjct: 35 IFSLDIQYVEEDAFVA---IDVLRWQEGAEKVY--LSLQKAGMEYRPRYFSFREGPPLLA 89
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-LHHVD---G 211
+ ++++ L+VDG+G+ HPR G+AS +GV + +IG+ K L VD G
Sbjct: 90 AILALEEKLGE-KASCLLVDGHGIAHPRRLGVASWLGVQLDRPSIGMAKRPLLAVDDPAG 148
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV- 270
+ V ++ NE+++ G A+R T +KPI+IS+GH I L+TA
Sbjct: 149 MERGSVSPIM-----QNEELL----------GYALR-TQAGVKPIYISIGHKIDLETARE 192
Query: 271 MIVKMTCK-YRVPEPIRQADIRSRDY 295
M++++ + YR+PEPIR+AD +R +
Sbjct: 193 MVLQLADQGYRIPEPIRRADHAARAF 218
>gi|448399933|ref|ZP_21571151.1| endonuclease V [Haloterrigena limicola JCM 13563]
gi|445668055|gb|ELZ20689.1| endonuclease V [Haloterrigena limicola JCM 13563]
Length = 245
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 129/246 (52%), Gaps = 30/246 (12%)
Query: 58 IQDELKKRLITEDFFTWNLPNSTTTNTSTK---EEEEVLLKYIGGVDMSF-SKEDPSIAC 113
+Q E+ + ED F ++ PN+ ++ + +E+ ++ GVD SF + D
Sbjct: 4 LQREIADIAVFEDDFAFD-PNALSSPLAAAASGDEQPTVV----GVDQSFLTNADGEQDR 58
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
V+ + +++ +++ L +PY+PG L+FRE +L+ L+ + P +++
Sbjct: 59 ALSAVVATRGGEVIERVHAVTGLDIPYIPGLLSFREGGPILAALEELS-----VDPDLIL 113
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVRQLLDAKENN 227
DG+G +H R G+A+H+GV+ ++ +IGV K+L DGL +G R ++A
Sbjct: 114 FDGSGRIHFRQAGIATHMGVVRDVPSIGVAKSLLCGRPRKDTDGLP-AGSRVAIEANGRV 172
Query: 228 NEDIIPLMGGSGSTWGVAMR--STPDT-LKPIFISVGHCISLDTAVMIV-KMTCKYRVPE 283
+ L+G + V R +P+ + P+++S GH + +TA +V ++ Y++PE
Sbjct: 173 DAPDGTLIG-----YAVQTRQYDSPNRHINPLYVSSGHRVGPETAANVVLELATSYKLPE 227
Query: 284 PIRQAD 289
P+R AD
Sbjct: 228 PVRLAD 233
>gi|448481627|ref|ZP_21604978.1| endonuclease V [Halorubrum arcis JCM 13916]
gi|445821880|gb|EMA71664.1| endonuclease V [Halorubrum arcis JCM 13916]
Length = 289
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 135/297 (45%), Gaps = 34/297 (11%)
Query: 6 VQQPHLRREFHSIPEQMSSCYRSYMENYCEEEREALASPDPAAQAQLNQWTE----IQDE 61
+ +P LR + ++M + R E+ + L PD A + + ++D
Sbjct: 3 LARPDLRPDPSLSRDEMEALQREIAAAATFEDDQGL-DPDAIAVDEATSLADGLPPVRDG 61
Query: 62 LKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF----SKEDPSIACGCIV 117
++RL T D + +T+ + ++ GVD +F + P A V
Sbjct: 62 AQERLGTGD--------EGSADTTPDPDGPTVV----GVDQAFLTDRDGDRPDAAVSAAV 109
Query: 118 VLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
T +V + L +PYVPG LAFRE +L+ LD + P +L+ DG+
Sbjct: 110 AFRAGT--VVEYASATTALSIPYVPGLLAFREGEPILTALDALDA-----APDLLVCDGS 162
Query: 178 GLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGG 237
G +H R GLA+H+GVL + ++GV K+L + + R +D +
Sbjct: 163 GRIHFREAGLATHVGVLRDTPSVGVAKSLLCGEPDESTSERPEGWRTPVRADDAV-TTAE 221
Query: 238 SGSTWGVAMRST--PDT--LKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
G+ G A +S P++ + P+++S GH +S +TAV V C Y++PEP R AD
Sbjct: 222 PGTVIGHAFQSRQYPNSKRVNPLYVSPGHRVSAETAVEFVAALCAGYKLPEPTRLAD 278
>gi|284165901|ref|YP_003404180.1| deoxyribonuclease V [Haloterrigena turkmenica DSM 5511]
gi|284015556|gb|ADB61507.1| Deoxyribonuclease V [Haloterrigena turkmenica DSM 5511]
Length = 265
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 135/268 (50%), Gaps = 40/268 (14%)
Query: 42 ASPD--PAAQAQLNQWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLKY 96
A PD P A + + +Q E+ + ED F ++ L + +S + V+
Sbjct: 4 ARPDLVPDASLERDDMEAMQREIADAAVFEDDFDFDPATLGDPLAAASSGADPPTVV--- 60
Query: 97 IGGVDMSF---SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
GVD SF D A +V + + +++ +++ L++PY+PG L+FRE +
Sbjct: 61 --GVDQSFLTNEAGDQDRALSAVVAM--RGGEVIERVHAVTPLEIPYIPGLLSFREGRPI 116
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------H 207
L+ L+ + P +++ DG+G +H R G+A+H+GV+ ++ +IGV K+L
Sbjct: 117 LAALEELS-----VDPDLILFDGSGRIHFRQAGIATHMGVVRDVPSIGVAKSLLCGTPTE 171
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGH 262
+ L GVR + E+N+ P G+ G A+++ +P+ + P+++S GH
Sbjct: 172 DTENLPE-GVRVPI---ESNSRVDAP----DGTLLGYAVQTRQYDSPNRYINPLYVSPGH 223
Query: 263 CISLDTAVMI-VKMTCKYRVPEPIRQAD 289
+ +TA + + + Y++PEP+R AD
Sbjct: 224 RVGPETAADVALALASSYKLPEPVRLAD 251
>gi|76801231|ref|YP_326239.1| endonuclease V [Natronomonas pharaonis DSM 2160]
gi|121698502|sp|Q3IT64.1|NFI_NATPD RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|76557096|emb|CAI48670.1| endonuclease V [Natronomonas pharaonis DSM 2160]
Length = 248
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 17/208 (8%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD +F + A +VVL + ++V ++++ L +PY+PG LAFRE ++
Sbjct: 50 VAGVDQAFLDDR---AVSAVVVL--RGGEVVAREHAVTPLSIPYIPGLLAFREGGPIIDA 104
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L + P +L+VDG+G +H R GLA+H G+L ++ +GV K L + G
Sbjct: 105 LSRLD-----VEPDLLVVDGSGRIHFREAGLATHAGLLFDVPAVGVAKRL--LCGEPSRT 157
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRST--PDT--LKPIFISVGHCISLDTAV-M 271
V L + E + G+ G A +S PD+ + P++IS GH + +TAV
Sbjct: 158 VASLPEGTRVPIEADDSMTAADGTVVGYAYQSRQYPDSKRINPLYISPGHRLCAETAVDC 217
Query: 272 IVKMTCKYRVPEPIRQADIRSRDYLQKH 299
+ +Y++P P R AD + D ++
Sbjct: 218 VAACGGEYKLPRPTRLADGHADDLKARY 245
>gi|448358541|ref|ZP_21547221.1| endonuclease V [Natrialba chahannaoensis JCM 10990]
gi|445645690|gb|ELY98689.1| endonuclease V [Natrialba chahannaoensis JCM 10990]
Length = 289
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 111/201 (55%), Gaps = 20/201 (9%)
Query: 99 GVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
G+D SF + E V+ +++ ++V +++ L+ PY+PG L+FRE +L+ L
Sbjct: 87 GIDQSFLTNEAGDQDRALSAVVAMRSGEVVERVHAVTTLETPYIPGLLSFREGGAILAAL 146
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDGLT-- 213
+++ P + + DG+G +H R G+A+HIGV+ ++ +IGV K+L + G T
Sbjct: 147 ESLA-----VEPDLFLFDGSGRIHFRQAGIATHIGVVRDVPSIGVAKSLLCGSLQGDTAN 201
Query: 214 -HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR--STPDT-LKPIFISVGHCISLDTA 269
+G R ++A ++ + L+G + V R +P+ + P+++S GH + +TA
Sbjct: 202 LSAGTRVAIEADDSVDAPEGTLLG-----YAVQTRQYDSPNRYINPLYVSPGHRVGPETA 256
Query: 270 V-MIVKMTCKYRVPEPIRQAD 289
+ + + Y++PEP+R AD
Sbjct: 257 ADLALGLAGTYKLPEPVRLAD 277
>gi|417345297|ref|ZP_12125453.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|357953126|gb|EHJ79787.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
Length = 184
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 18/173 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
G + L + + PLM G RS P+FI+ GH +S D+
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVSTDS 184
>gi|320103515|ref|YP_004179106.1| Deoxyribonuclease V [Isosphaera pallida ATCC 43644]
gi|319750797|gb|ADV62557.1| Deoxyribonuclease V [Isosphaera pallida ATCC 43644]
Length = 249
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 14/168 (8%)
Query: 123 TLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKR-ANHFYPQVLMVDGNGLLH 181
+ + + E Y+ +R PY+ G L+FRE P +L D+++ R P V++ DG GL H
Sbjct: 72 SFERLAEGYAEVRATFPYIAGLLSFREVPAILRAFDDLEARHGRSIRPDVILCDGQGLAH 131
Query: 182 PRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGST 241
PRG GLA H+G+ + ++GV K G + + + +I G
Sbjct: 132 PRGLGLACHLGLWLDRPSVGVAKT-------RLVGQFEPVGPSPGDQSPLI----HQGRP 180
Query: 242 WGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQA 288
G +R T P+F+S GH LD+A +V C R P PIR A
Sbjct: 181 VGAVIR-TRARAGPLFVSPGHLCDLDSATSLVWACCDGRRQPLPIRWA 227
>gi|424840834|ref|ZP_18265459.1| deoxyinosine 3'endonuclease (endonuclease V) [Saprospira grandis
DSM 2844]
gi|395319032|gb|EJF51953.1| deoxyinosine 3'endonuclease (endonuclease V) [Saprospira grandis
DSM 2844]
Length = 229
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 19/200 (9%)
Query: 101 DMSFSKEDPSIACGCIVVLDLQTLQIVYEDY--SLLRLQVPYVPGFLAFREAPVLLSLLD 158
D+ FS + + V +D+ Q E SL + + Y P + +FRE P LL+ +
Sbjct: 33 DLIFSLDIQYVEEEAFVAIDVLRWQEGAEKVYLSLQKAGMEYRPRYFSFREGPPLLAAIL 92
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-LHHVDGLTHSGV 217
+++ L+VDG+G+ HPR G+AS +GV A+ +IG+ K L VD
Sbjct: 93 ALEEILGE-KASCLLVDGHGIAHPRRLGVASWLGVQADRPSIGMAKRPLLAVD------- 144
Query: 218 RQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMT 276
D + + P+M G A+R T +KPI+IS+GH I L+TA M++++
Sbjct: 145 ----DPEGEERGSVSPIMQNE-ELLGYALR-TQTGVKPIYISIGHKIDLETAREMVLQLA 198
Query: 277 CK-YRVPEPIRQADIRSRDY 295
+ YR+PEPIR+AD +R +
Sbjct: 199 DQGYRIPEPIRRADHAARAF 218
>gi|407648147|ref|YP_006811906.1| endonuclease V [Nocardia brasiliensis ATCC 700358]
gi|407311031|gb|AFU04932.1| endonuclease V [Nocardia brasiliensis ATCC 700358]
Length = 230
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 78/160 (48%), Gaps = 19/160 (11%)
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PY PG LAFRE P + L + P +L+ D GL HPR G A HIGVL +
Sbjct: 82 PYHPGLLAFRELPTTMRALAQLTA-----APDLLVCDAQGLAHPRRLGFACHIGVLTGVP 136
Query: 199 TIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
IGV K++ G + D+ G G A+R T +KP+F+
Sbjct: 137 AIGVAKSVW--------GDYAEPGPERGARTDVTI----DGEVVGSALR-TRAGVKPVFV 183
Query: 259 SVGHCISLDTA-VMIVKMTCKYRVPEPIRQADIRSRDYLQ 297
S+GH I LD+A ++ +T YR+PE R+AD R L+
Sbjct: 184 SIGHRIDLDSACAQVLALTPAYRLPETTRRADALCRTALK 223
>gi|448468110|ref|ZP_21599741.1| endonuclease V [Halorubrum kocurii JCM 14978]
gi|445810853|gb|EMA60867.1| endonuclease V [Halorubrum kocurii JCM 14978]
Length = 302
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD +F D + ++ +++ + L +PYVPG LAFRE +L+ LD
Sbjct: 100 GVDQAFLTPDDGEDRAVSAAVAIRDGEVIEYASATTPLSIPYVPGLLAFREGEPMLAALD 159
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL-----HHVDGLT 213
++ P +L+ DG+G +H R G+A+H+GVL ++ ++GV K+L
Sbjct: 160 ALEAE-----PDLLVCDGSGRIHFREAGVATHVGVLLDVPSVGVAKSLLCGKPDEPTAER 214
Query: 214 HSGVRQLL---DAKENNNEDIIPLMGGSGSTWGVAMRSTPDT--LKPIFISVGHCISLDT 268
+G R + DA E D ++G R P++ + P+++S GH +S T
Sbjct: 215 PAGWRTPIRADDAVETAASDSETVIG-----HAYQSRQYPNSRRVNPLYVSPGHRVSPGT 269
Query: 269 AVMIVKMTCK-YRVPEPIRQAD 289
V V+ C Y++PEP R AD
Sbjct: 270 TVEFVEALCAGYKLPEPTRIAD 291
>gi|325106647|ref|YP_004267715.1| deoxyribonuclease V [Planctomyces brasiliensis DSM 5305]
gi|324966915|gb|ADY57693.1| Deoxyribonuclease V [Planctomyces brasiliensis DSM 5305]
Length = 333
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 109/199 (54%), Gaps = 17/199 (8%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G+D+++ K ++A + ++ +T QI+Y+ + PY+PG+L++RE PVLL L
Sbjct: 147 IAGLDVAYPKS--TLARAAYIEIERRTGQILYQQQITSPCRFPYIPGYLSYREIPVLLEL 204
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L + + VLM+DG+G LHPR FG+A H+G+L T+GV K L + G S
Sbjct: 205 LHVVLQ--ERPLADVLMIDGSGRLHPRRFGIACHLGMLLQHPTLGVSKKL--LTGKLRS- 259
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
E ++ IP++ S + G A+ T + + +F+S GH +S D A I T
Sbjct: 260 --------EADDRLSIPIVLPSEPSAGYAIAQTKSSNR-LFVSPGHRLSTDQARNIALET 310
Query: 277 C-KYRVPEPIRQADIRSRD 294
++ +P+P AD +R+
Sbjct: 311 WDQHPLPDPTYYADRLTRN 329
>gi|448572798|ref|ZP_21640559.1| endonuclease V [Haloferax lucentense DSM 14919]
gi|445719570|gb|ELZ71249.1| endonuclease V [Haloferax lucentense DSM 14919]
Length = 276
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 41/275 (14%)
Query: 42 ASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLP-NSTTTNTSTKEEEEVLL------ 94
A PD A + L++ + + L++R+ F +LP + + ++ E E L
Sbjct: 4 ARPDLAPRPGLSR--DEMESLQRRVAETAVFADDLPFDPAAVSLASPETEHQTLAEATAL 61
Query: 95 ---------KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFL 145
+ G+D SF + A +VVL + ++V +++ L +PY+PG L
Sbjct: 62 DADAAADSPPLVAGIDQSFLDDR---ALSAVVVL--RGGEVVERAHAVSDLDLPYIPGLL 116
Query: 146 AFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+FRE +L L + P +L+ DG+G +H R GLA+H+GV+ + +IGV K+
Sbjct: 117 SFREGGPILDALAELD-----CDPDLLVFDGSGRIHFRQAGLATHLGVVCDAPSIGVAKS 171
Query: 206 L------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDTLKP 255
L V+G G R + A +++ + + GS +T G A +S + + P
Sbjct: 172 LLCGTPDEDVNGRPE-GWRTPIRA-DDSVDAVGGHPAGSETTIGYAFQSRQYDSRPVVNP 229
Query: 256 IFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+++S GH +S T V ++ +++ Y++PEP R AD
Sbjct: 230 LYVSPGHRLSAATTVDLVSRLSGSYKLPEPTRLAD 264
>gi|448630609|ref|ZP_21673189.1| endonuclease V [Haloarcula vallismortis ATCC 29715]
gi|445755642|gb|EMA07025.1| endonuclease V [Haloarcula vallismortis ATCC 29715]
Length = 272
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 110/205 (53%), Gaps = 28/205 (13%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD +F + A IVVL + +++ ++ R ++PY+PG L+FRE +L+
Sbjct: 69 VAGVDQAFVDDR---AVSAIVVL--RNGEVIERVSAVKRTEIPYIPGLLSFREGGAILAA 123
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVD 210
++ P V++VDG+G +H R GLA+HIGV ++ +GV K+L ++
Sbjct: 124 FAELETD-----PDVVLVDGSGRIHFREAGLATHIGVTLDVPAVGVAKSLLCGTPAQSLE 178
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCIS 265
G R + A +++ + P +G+ G A+++ +P+ + P+ +S GH +S
Sbjct: 179 ETYPEGTRIPIAA--DDSVETCP----NGTVIGHAVQTRQYDSPNRYINPLIVSPGHRVS 232
Query: 266 LDTAVMIVKMTCK-YRVPEPIRQAD 289
TA +V+ T Y++PEP R AD
Sbjct: 233 ASTAADLVEGTADGYKLPEPTRLAD 257
>gi|448323637|ref|ZP_21513095.1| endonuclease V [Natronococcus amylolyticus DSM 10524]
gi|445599533|gb|ELY53566.1| endonuclease V [Natronococcus amylolyticus DSM 10524]
Length = 263
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 128/266 (48%), Gaps = 34/266 (12%)
Query: 41 LASPD--PAAQAQLNQWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLK 95
++ PD P A ++ +Q E+ + ED ++ L + ++S E
Sbjct: 3 VSRPDLVPDASLDRSEMEALQREIADAAVFEDDLEFDPAVLGDPLAASSSEGEP-----P 57
Query: 96 YIGGVDMSF---SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
+ GVD SF D A +V + Q +++ +++ L++PY+PG L+FRE
Sbjct: 58 IVAGVDQSFLTNEAGDQDRALSAVVAV--QGGEVIERVHAVTSLEIPYIPGLLSFREGAP 115
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+ L+ + P +L+ DG+G +H R G+A+H+GV+ + ++GV K+L L
Sbjct: 116 IRDALEELS-----VEPDLLLFDGSGRIHFRQAGIATHMGVVLDAPSVGVAKSL-----L 165
Query: 213 THSGVRQLLDAKENNNEDI-----IPLMGGSGSTWGVAMR--STPDT-LKPIFISVGHCI 264
S L D E I + + G+ + V R +PD + P+++S GH +
Sbjct: 166 CGSPREDLEDLPEGTRVGIEANSRVDVEDGTLLGYAVQTRQYDSPDRYINPLYVSPGHRV 225
Query: 265 SLDTAVMI-VKMTCKYRVPEPIRQAD 289
+TA + + ++ Y++P+P+R AD
Sbjct: 226 GPETAADVALALSSSYKLPDPVRLAD 251
>gi|21243602|ref|NP_643184.1| endonuclease V [Xanthomonas axonopodis pv. citri str. 306]
gi|56404411|sp|Q8PIM0.1|NFI_XANAC RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|21109174|gb|AAM37720.1| endonuclease V [Xanthomonas axonopodis pv. citri str. 306]
Length = 237
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 97/196 (49%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + G D+ F ++D V+LD QTL + + + +PYVPG L+FRE P LL
Sbjct: 40 QLLAGFDVGF-EDDGQTTRAAAVLLDAQTLLPLETHIARVPTSMPYVPGLLSFRELPALL 98
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 99 QALALLSR-----TPDLVFIDGQGIAHPRKLGIAAHFGVVTGLPCIGIAKQ-RLAGSFAE 152
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G E + I L+GGS W A+RS P P+ +S GH +S+ A+
Sbjct: 153 PG-------PERGDHTPI-LLGGSQIGW--ALRSKPRC-NPLIVSPGHRVSMQGALDWTL 201
Query: 275 MTCK-YRVPEPIRQAD 289
T + YR+PEP R AD
Sbjct: 202 RTLRAYRLPEPTRLAD 217
>gi|448456471|ref|ZP_21595240.1| endonuclease V [Halorubrum lipolyticum DSM 21995]
gi|445811947|gb|EMA61944.1| endonuclease V [Halorubrum lipolyticum DSM 21995]
Length = 281
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 105/204 (51%), Gaps = 25/204 (12%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD +F D + ++ ++ + L +PYVPG LAFRE +L+ LD
Sbjct: 79 GVDQAFLTPDDGEDRAVSAAVAIRDGAVIEYASATTPLSIPYVPGLLAFREGEPMLAALD 138
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDGLTHS- 215
++ P +L+ DG+G +H R G+A+H+GVL ++ ++GV K+L D T
Sbjct: 139 GLETE-----PDLLVCDGSGRIHFREAGVATHVGVLLDVPSVGVAKSLLCGAPDESTDER 193
Query: 216 --GVRQLL---DAKENNNEDIIPLMGGSGSTWGVAMRST--PDT--LKPIFISVGHCISL 266
G R + D+ E + D + ST G A +S P++ + P+++S GH +S
Sbjct: 194 PVGWRTPVRADDSVETADPD-------TASTIGHAYQSRQYPNSRRVNPLYVSPGHRVSP 246
Query: 267 DTAVMIVKMTCK-YRVPEPIRQAD 289
T V +V+ C Y++PEP R AD
Sbjct: 247 ATTVELVEALCAGYKLPEPTRIAD 270
>gi|448597020|ref|ZP_21654158.1| endonuclease V [Haloferax alexandrinus JCM 10717]
gi|445740901|gb|ELZ92406.1| endonuclease V [Haloferax alexandrinus JCM 10717]
Length = 277
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 42/276 (15%)
Query: 42 ASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLP-NSTTTNTSTKEEEEVLL------ 94
A PD A + L++ + + L++R+ F +LP + + ++ E E L
Sbjct: 4 ARPDLAPRPGLSR--DEMESLQRRVAETAVFADDLPFDPAAVSLASPETEHQTLAEATAL 61
Query: 95 ----------KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGF 144
+ G+D SF + A +VVL + ++V +++ L +PY+PG
Sbjct: 62 DADAAAADSPPLVAGIDQSFLDDR---ALSAVVVL--RGGEVVERAHAVSDLDLPYIPGL 116
Query: 145 LAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGK 204
L+FRE +L L + P +L+ DG+G +H R GLA+H+GV+ + +IGV K
Sbjct: 117 LSFREGGPILDALAELD-----CDPDLLVFDGSGRIHFRQAGLATHLGVVCDAPSIGVAK 171
Query: 205 NL------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDTLK 254
+L V+G G R + A +++ + + GS +T G A +S + +
Sbjct: 172 SLLCGTPDEDVNGRPE-GWRTPIRA-DDSVDAVGGHPAGSETTIGYAFQSRQYDSRPVVN 229
Query: 255 PIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
P+++S GH +S T V ++ +++ Y++PEP R AD
Sbjct: 230 PLYVSPGHRLSAATTVDLVSRLSGSYKLPEPTRLAD 265
>gi|417491336|ref|ZP_12173052.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
gi|353630489|gb|EHC78028.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Rubislaw str. A4-653]
Length = 190
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 89/170 (52%), Gaps = 18/170 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PNLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCIS 265
G + L A+ + PLM G RS P+FI+ GH +S
Sbjct: 137 GKFEPLSAEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRVS 181
>gi|418516593|ref|ZP_13082765.1| endonuclease V [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
gi|418519605|ref|ZP_13085657.1| endonuclease V [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410705049|gb|EKQ63528.1| endonuclease V [Xanthomonas axonopodis pv. malvacearum str.
GSPB2388]
gi|410706609|gb|EKQ65067.1| endonuclease V [Xanthomonas axonopodis pv. malvacearum str.
GSPB1386]
Length = 237
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 37/237 (15%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
Q ++Q +L +R++ +D + + ++L G D+ F ++D
Sbjct: 17 QARQLQRQLARRVVLDD--------------AVRATPQLL----AGFDVGF-EDDGQTTR 57
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
V+LD QTL + + + +PYVPG L+FRE P LL L + + P ++
Sbjct: 58 AAAVLLDAQTLLPLETHIARVPTSMPYVPGLLSFRELPALLQALALLSR-----TPDLVF 112
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
+DG G+ HPR G+A+H GV+ L IG+ K G E + I
Sbjct: 113 IDGQGIAHPRKLGIAAHFGVVTGLPCIGIAKQ-RLAGSFAEPG-------PERGDHTPI- 163
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
L+GG+ W A+RS P P+ +S GH +S+ A+ T + YR+PEP R AD
Sbjct: 164 LLGGAQIGW--ALRSKPRC-NPLIVSPGHRVSMQGALEWTLRTLRAYRLPEPTRLAD 217
>gi|145592532|ref|YP_001154534.1| endonuclease V [Pyrobaculum arsenaticum DSM 13514]
gi|145284300|gb|ABP51882.1| Endonuclease V [Pyrobaculum arsenaticum DSM 13514]
Length = 214
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 100/192 (52%), Gaps = 29/192 (15%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D+++S + +A G VV+ + L++V S+ + VPYVP +LAFRE +L
Sbjct: 30 VAGLDVAYSGD---VAYGAAVVVKMPALEVVDVACSVSKAVVPYVPTYLAFRELSPMLRA 86
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
++ + P +++VDG+G+ HPR FG+ASHIGV+ TIGV K+ + G+ G
Sbjct: 87 YFKLRVK-----PDIILVDGHGVAHPRRFGIASHIGVVLKKPTIGVAKS--RLYGVEEGG 139
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
+LD + E + ++ G + +SVG +L+ AV IV+
Sbjct: 140 C--VLD--PSTGEVLAQVVKCGGKKY---------------VSVGSYATLEDAVRIVETL 180
Query: 277 CKYRVPEPIRQA 288
CK P+R A
Sbjct: 181 CKKGDVYPLRAA 192
>gi|433435514|ref|ZP_20408130.1| endonuclease V, partial [Haloferax sp. BAB2207]
gi|432192333|gb|ELK49222.1| endonuclease V, partial [Haloferax sp. BAB2207]
Length = 237
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 110/204 (53%), Gaps = 23/204 (11%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ G+D SF + A +VVL + ++V +++ L +PY+PG L+FRE +L
Sbjct: 34 VAGIDQSFLDDR---ALSAVVVL--RGGEVVERAHAVSDLDLPYIPGLLSFREGGPILDA 88
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVD 210
L + P +L+ DG+G +H R GLA+H+GV+ + +IGV K+L VD
Sbjct: 89 LAELDCD-----PDLLVFDGSGRIHFRQAGLATHLGVVCDAPSIGVAKSLLCGTPDEDVD 143
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDTLKPIFISVGHCISL 266
G G R + A +++ + + GS +T G A +S + + P+++S GH +S
Sbjct: 144 GRPE-GWRTPIRA-DDSVDAVGGHPAGSETTIGYAFQSRQYDSRPVVNPLYVSPGHRLSA 201
Query: 267 DTAV-MIVKMTCKYRVPEPIRQAD 289
T V ++ +++ Y++PEP R AD
Sbjct: 202 ATTVDLVSQLSGSYKLPEPTRLAD 225
>gi|346725699|ref|YP_004852368.1| endonuclease V [Xanthomonas axonopodis pv. citrumelo F1]
gi|346650446|gb|AEO43070.1| endonuclease V [Xanthomonas axonopodis pv. citrumelo F1]
Length = 237
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + G D+ F ++D I V+LD QTL + + + +PYVPG L+FRE P LL
Sbjct: 40 QLLAGFDVGF-EDDGQITRAAAVLLDAQTLLPLETHVARVPTSMPYVPGLLSFRELPALL 98
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 99 QALALLSR-----TPDLVFIDGQGIAHPRRLGIAAHFGVVTGLPCIGIAKQ-RLAGSFAE 152
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G E + I L+GG+ W A+RS P P+ +S GH +S+ A+
Sbjct: 153 PG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHRVSMQGALDWTL 201
Query: 275 MTCK-YRVPEPIRQAD 289
T + YR+PEP R AD
Sbjct: 202 RTLRAYRLPEPTRLAD 217
>gi|257389005|ref|YP_003178778.1| deoxyribonuclease V [Halomicrobium mukohataei DSM 12286]
gi|257171312|gb|ACV49071.1| Deoxyribonuclease V [Halomicrobium mukohataei DSM 12286]
Length = 272
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 99/177 (55%), Gaps = 23/177 (12%)
Query: 125 QIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRG 184
++V ++ + ++PY+PG L+FRE +L+ L +++ P +L+VDG+G +H R
Sbjct: 92 EVVERVHAAVETEIPYIPGLLSFREGGAILAALGELRR-----TPDLLVVDGSGRIHFRE 146
Query: 185 FGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGS 238
GLA+H+GVL ++ IGV K+L +DG G ++A +++ E P
Sbjct: 147 AGLATHVGVLFDVPAIGVAKSLLCGRPRESLDGKLSVGTTVGIEA-DDSVETATP----- 200
Query: 239 GSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQAD 289
G+ G A+++ +P + P+++S GH + +T +++ T Y++PEP R AD
Sbjct: 201 GALIGHAVQTRQYDSPKRHVNPLYVSPGHRVGAETVPELVLATTAGYKLPEPTRLAD 257
>gi|448346154|ref|ZP_21535042.1| endonuclease V [Natrinema altunense JCM 12890]
gi|445633164|gb|ELY86364.1| endonuclease V [Natrinema altunense JCM 12890]
Length = 263
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 139/264 (52%), Gaps = 36/264 (13%)
Query: 44 PDPAAQAQLN--QWTEIQDELKKRLITEDFFTWNLPNSTT---TNTSTKEEEEVLLKYIG 98
PD A A L+ + +Q E+ ED F ++ P++ + +T+ + V++
Sbjct: 6 PDLAPDADLSRGEMEALQREIGTLATFEDDFAFD-PDALSNPLASTADGGKPPVVV---- 60
Query: 99 GVDMSFSKEDPSIACGCI-VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GVD SF D + V+ + +++ +++ L++PY+PG L+FRE +L+ L
Sbjct: 61 GVDQSFLTNDAGDQDRALSAVVATRGGEVIERVHAVTPLEIPYIPGLLSFREGAPILAAL 120
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGV 217
+N+ P + + DG+G +H R G+A+H+GV+ ++ +IGV K+L + G+
Sbjct: 121 ENLS-----VDPDLCLFDGSGRIHFRQAGIATHMGVVRDVPSIGVAKSL--LCGMP---- 169
Query: 218 RQLLDAKENNNEDIIPLMGGS------GSTWGVAMRS----TPD-TLKPIFISVGHCISL 266
R+ D + + IP+ + G+ G A+++ +P+ ++ P+++S GH +
Sbjct: 170 REDTDDRPTGTK--IPIESNARVDAPDGTVLGYAVQTRQYDSPNRSINPLYVSPGHRVGP 227
Query: 267 DTAVMI-VKMTCKYRVPEPIRQAD 289
+TA I + + Y++P+P+R AD
Sbjct: 228 ETAADIALALASSYKLPDPVRLAD 251
>gi|289664623|ref|ZP_06486204.1| endonuclease V [Xanthomonas campestris pv. vasculorum NCPPB 702]
Length = 235
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
++E + + G D+ F ++D V+LD TL + + + +PYVPG L+
Sbjct: 32 RDEVSATPQLLAGFDVGF-EDDGQTTRAAAVLLDAHTLLPLETHVARVPTSMPYVPGLLS 90
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P LL L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 91 FRELPALLQALALLSR-----TPDLVFIDGQGIAHPRKLGIAAHFGVVTGLPCIGIAKQ- 144
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
T G E + I L+GG+ W A+RS P P+ +S GH +S+
Sbjct: 145 RLAGSFTEPG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHRMSM 193
Query: 267 DTAVMIVKMTCK-YRVPEPIRQAD 289
A+ T + YR+PEP R AD
Sbjct: 194 QGALDWTLRTLRAYRLPEPTRLAD 217
>gi|448340716|ref|ZP_21529686.1| endonuclease V [Natrinema gari JCM 14663]
gi|445629656|gb|ELY82932.1| endonuclease V [Natrinema gari JCM 14663]
Length = 263
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 137/266 (51%), Gaps = 30/266 (11%)
Query: 44 PDPAAQAQLNQ--WTEIQDELKKRLITEDFFTWNLPNSTT---TNTSTKEEEEVLLKYIG 98
PD A A L++ +Q E+ ED F ++ P++ + +T+ + V++
Sbjct: 6 PDLAPDADLSREAMEALQREIAAVATFEDDFAFD-PDALSNPLASTADGGQPPVVV---- 60
Query: 99 GVDMSFSKEDPSIACGCI-VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GVD SF D + V+ ++ +++ +++ L+ PY+PG L+FRE +L+ L
Sbjct: 61 GVDQSFLTNDAGDQDRALSAVVAIRGGEVIERVHAVTPLESPYIPGLLSFREGAPILAAL 120
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGV 217
+ + P++ + DG+G +H R G+A+H+GV+ ++ +IGV K+L +
Sbjct: 121 EKLS-----VDPELCLFDGSGRIHFRQAGIATHMGVVRDVPSIGVAKSLLCGTPRADTDD 175
Query: 218 RQL---LDAKENNNEDIIPLMGGSGSTWGVAMRS----TPD-TLKPIFISVGHCISLDTA 269
RQ + + N D +G+ G A+++ +P+ ++ P+++S GH + +TA
Sbjct: 176 RQTGTKIPIESNARVD-----APNGTVLGYAVQTRQYDSPNRSINPLYVSPGHRVGPETA 230
Query: 270 VMI-VKMTCKYRVPEPIRQADIRSRD 294
I + + Y++PEP+R AD + D
Sbjct: 231 ADIALALASSYKLPEPVRLADKYAAD 256
>gi|409728507|ref|ZP_11271363.1| endonuclease V [Halococcus hamelinensis 100A6]
gi|448722868|ref|ZP_21705396.1| endonuclease V [Halococcus hamelinensis 100A6]
gi|445788535|gb|EMA39244.1| endonuclease V [Halococcus hamelinensis 100A6]
Length = 256
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 130/262 (49%), Gaps = 43/262 (16%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRL-----ITEDF-FTWNLPNSTTTNTSTKEEEEVLLKYI 97
PDPA E+ ++L++ + T+DF F + ++T T T+ + +++
Sbjct: 10 PDPA------DSREVMEDLQRGVAATARFTDDFEFDLDTVSATPTLTNHAMDPPIIV--- 60
Query: 98 GGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GVD +F + A G +V L + ++V +++ PY+PG L+FREA +++
Sbjct: 61 -GVDQAFLDDR---AVGAVVAL--RGGEVVERASAVVDCDFPYIPGLLSFREAGAIVAAF 114
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDG 211
++ P + + DG+G +H R GLA+H+G+L +L +IGV K L +D
Sbjct: 115 ADLDVE-----PDLAVFDGSGRIHFREAGLATHLGLLFDLPSIGVAKGLLCGTPDSSLDD 169
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR---STPDTLKPIFISVGHCISLDT 268
L G R + A ++ E L+G + V R S T+ P+++S GH + T
Sbjct: 170 LPE-GSRVAIRA-DDRVETTDGLIG-----YAVQTRQYDSGSRTINPVYVSPGHRVGPPT 222
Query: 269 AVMIVKMTCK-YRVPEPIRQAD 289
A + + C Y++PEP R AD
Sbjct: 223 AADLAERLCAGYKLPEPTRLAD 244
>gi|294625033|ref|ZP_06703682.1| endonuclease V [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|294665345|ref|ZP_06730636.1| endonuclease V [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292600663|gb|EFF44751.1| endonuclease V [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292604894|gb|EFF48254.1| endonuclease V [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 237
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 97/196 (49%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + G D+ F ++D V+LD QTL + + + +PYVPG L+FRE P LL
Sbjct: 40 QLLAGFDVGF-EDDGQTTRAAAVLLDAQTLLPLETHIARVPTSMPYVPGLLSFRELPALL 98
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 99 QALALLSR-----TPDLVFIDGQGIAHPRKLGIAAHFGVVTGLPCIGIAKQ-RLAGSFAE 152
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G E + I L+GG+ W A+RS P P+ +S GH +S+ A+
Sbjct: 153 PG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHRVSMQGALDWTL 201
Query: 275 MTCK-YRVPEPIRQAD 289
T + YR+PEP R AD
Sbjct: 202 RTLRTYRLPEPTRLAD 217
>gi|448317482|ref|ZP_21507035.1| endonuclease V [Natronococcus jeotgali DSM 18795]
gi|445603383|gb|ELY57346.1| endonuclease V [Natronococcus jeotgali DSM 18795]
Length = 263
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 124/256 (48%), Gaps = 26/256 (10%)
Query: 46 PAAQAQLNQWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLKYIGGVDM 102
P A + +Q E+ + + ED ++ L + + S E + GVD
Sbjct: 10 PDASLERADMEALQREIAEAAVFEDDLEFDPAVLGDPLAASASAGEP-----PIVAGVDQ 64
Query: 103 SF---SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDN 159
+F D A +V + Q +++ +++ L +PY+PG L+FRE +L L+
Sbjct: 65 AFLTNEAGDQDRALSAVVAV--QGGEVIERVHAVTPLSIPYIPGLLSFREGAPILDALEE 122
Query: 160 MKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQ 219
+ P +L+ DG+G +H R G+A+H+GV+ + +IG+ K+L + G +
Sbjct: 123 LS-----VEPDLLLFDGSGRIHFRQAGIATHMGVVLDAPSIGIAKSL--LCGSPRGDLED 175
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAV-MIV 273
L + E + G+ G A+++ +PD + P+++S GH + +TA + +
Sbjct: 176 LPEGTRVGIEANSRVDAEDGTLLGYAVQTRQYDSPDRYINPLYVSPGHRVGPETAADVAL 235
Query: 274 KMTCKYRVPEPIRQAD 289
++ Y++P+P+R AD
Sbjct: 236 ALSSSYKLPDPVRLAD 251
>gi|448348388|ref|ZP_21537237.1| endonuclease V [Natrialba taiwanensis DSM 12281]
gi|445642755|gb|ELY95817.1| endonuclease V [Natrialba taiwanensis DSM 12281]
Length = 267
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 134/278 (48%), Gaps = 41/278 (14%)
Query: 44 PDPAAQAQLNQWT--EIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLKYIG 98
PD A +L++ +Q E+ + D FT++ L N + + + ++
Sbjct: 8 PDLAPDPELDRAAMESLQREIADVAVFTDEFTFDSESLTNPLAASAAADGDPPTVV---- 63
Query: 99 GVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
G+D SF + E V+ ++ +++ ++ L+ PY+PG L+FRE +L+ L
Sbjct: 64 GIDQSFLTNEAGDQDRALSAVIAVRGGEVIERVAAVTELETPYIPGLLSFREGGAILAAL 123
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL-------HHVD 210
+ P + + DG+G +H R G+A+HIGV+ ++ ++GV K+L D
Sbjct: 124 AELSVE-----PDLFLFDGSGRIHFRQAGIATHIGVVRDVPSVGVAKSLLCGTPCEETAD 178
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCIS 265
T + V +AK + E G+ G A+++ +P+ + P+++S GH +
Sbjct: 179 LQTGTRVGIEANAKVDAPE---------GTLLGYAVQTRQYDSPNRYINPLYVSPGHRVG 229
Query: 266 LDTAVMI-VKMTCKYRVPEPIRQADIRS----RDYLQK 298
+TA I + + Y++PEP+R AD + RDY+
Sbjct: 230 PETAADIALALASSYKLPEPVRLADSYATEAKRDYVDS 267
>gi|56404430|sp|Q9YES5.2|NFI_AERPE RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
Length = 255
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 26/197 (13%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
G+D S+S +D + G V++ L+TL+ V + R+ +PY+PG LAFRE V+
Sbjct: 40 GLDASYSAKD-GVGVGAAVLISLETLEPVDCRVYISRVCIPYIPGLLAFRELAVMAPAAA 98
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVR 218
+ A+ V+MVDG+G+ HPR FG+ASH+GV+ +IGV K + G G
Sbjct: 99 ALSAEAD-----VVMVDGHGIAHPRRFGIASHVGVILERPSIGVAKK--KLVGTLVEGPG 151
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK 278
+ ++ G + + + P + +++S GH I+L+ A I + T +
Sbjct: 152 GMYVVQD-------------GERLAIVLGTRP---REVYVSPGHRITLEEAASIARATIR 195
Query: 279 YR--VPEPIRQADIRSR 293
+PEP R AD+ S+
Sbjct: 196 PGGWMPEPTRLADVISK 212
>gi|448337009|ref|ZP_21526094.1| endonuclease V [Natrinema pallidum DSM 3751]
gi|445627004|gb|ELY80336.1| endonuclease V [Natrinema pallidum DSM 3751]
Length = 304
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 130/258 (50%), Gaps = 24/258 (9%)
Query: 44 PDPAAQAQLN--QWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLKYIG 98
PD A A L+ + +Q E+ + ED F+++ L + T S + V+
Sbjct: 47 PDLAPDAGLSREEMEALQREIATAAVFEDDFSFDPDVLSSPLATTASGGDPPTVV----- 101
Query: 99 GVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
G+D SF + +D V+ + +++ +++ L++PY+PG L+FRE +L+ L
Sbjct: 102 GIDQSFLTNDDGDQDRALSAVVATRGGEVIERVHAVTPLEIPYIPGLLSFREGAPILAAL 161
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGV 217
+ + P + + DG+G +H R G+A+H+GV+ ++ +IGV K+L + G +
Sbjct: 162 ETLS-----VDPDLCLFDGSGRIHFRQAGIATHMGVVRDVPSIGVAKSL--LCGTPRADT 214
Query: 218 RQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDT-LKPIFISVGHCISLDTAVMI 272
E + G+ G A+++ +P+ + P+++S GH + +TA I
Sbjct: 215 DDRPTGTTVGIEANSRVDAPDGTLLGYAVQTRQYDSPNRHINPLYVSPGHRVGPETAADI 274
Query: 273 -VKMTCKYRVPEPIRQAD 289
+ ++ Y++PEP+R AD
Sbjct: 275 ALALSSSYKLPEPVRLAD 292
>gi|381172484|ref|ZP_09881611.1| endonuclease V [Xanthomonas citri pv. mangiferaeindicae LMG 941]
gi|380687051|emb|CCG38098.1| endonuclease V [Xanthomonas citri pv. mangiferaeindicae LMG 941]
Length = 237
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 110/237 (46%), Gaps = 37/237 (15%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
Q ++Q +L +R++ +D + + + G D+ F ++D
Sbjct: 17 QARQLQRQLARRVVLDDAVS------------------ATPQLLAGFDVGF-EDDGQTTR 57
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
V+LD QTL + + + +PYVPG L+FRE P LL L + + P ++
Sbjct: 58 AAAVLLDAQTLLPLETHIARVPTSMPYVPGLLSFRELPALLQALALLSR-----TPGLVF 112
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
+DG G+ HPR G+A+H GV+ L IG+ K G E + I
Sbjct: 113 IDGQGIAHPRKLGIAAHFGVVTGLPCIGIAKQ-RLAGSFAEPG-------PERGDHTPI- 163
Query: 234 LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
L+GG+ W A+RS P P+ +S GH +S+ A+ T + YR+PEP R AD
Sbjct: 164 LLGGAQIGW--ALRSKPRC-NPLIVSPGHRVSMQGALDWTLRTLRAYRLPEPTRLAD 217
>gi|223478432|ref|YP_002583298.1| Endonuclease V [Thermococcus sp. AM4]
gi|214033658|gb|EEB74484.1| Endonuclease V [Thermococcus sp. AM4]
Length = 191
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 65/239 (27%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + E+Q L KR++ E PN +T +G VD+S+ E
Sbjct: 5 LKRIAEVQLRLAKRIVEEPVD----PNVIST--------------VGAVDVSYRGEK--- 43
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PVLLSLLDNMKKRANHFYPQ 170
A G V+ +++ ++ PYVP F RE PVL++L K+R P
Sbjct: 44 ARGAFVLCSFPECRLLKVRTIETTVKFPYVPTFFFLRETKPVLMAL---GKER-----PD 95
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
VL+V+G+G HPRG+GLASHIG++ + T+GV K R L A E
Sbjct: 96 VLIVEGHGRAHPRGYGLASHIGLITGIPTVGVAK-------------RPLRGAPE----- 137
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQAD 289
GS + G A ++SVGH I L +AV IVK + P P++ AD
Sbjct: 138 ------GSLAKVGKA-----------YVSVGHLIDLPSAVAIVKALSRGGYPLPLKLAD 179
>gi|448543307|ref|ZP_21624876.1| endonuclease V [Haloferax sp. ATCC BAA-646]
gi|448550193|ref|ZP_21628716.1| endonuclease V [Haloferax sp. ATCC BAA-645]
gi|448559535|ref|ZP_21633609.1| endonuclease V [Haloferax sp. ATCC BAA-644]
gi|445706851|gb|ELZ58724.1| endonuclease V [Haloferax sp. ATCC BAA-646]
gi|445710925|gb|ELZ62720.1| endonuclease V [Haloferax sp. ATCC BAA-644]
gi|445711968|gb|ELZ63754.1| endonuclease V [Haloferax sp. ATCC BAA-645]
Length = 290
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 135/281 (48%), Gaps = 51/281 (18%)
Query: 42 ASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLP-NSTTTNTSTKEEEEVLL------ 94
A PD A + L++ + + L++R+ F +LP + + ++ E E L
Sbjct: 16 ARPDLAPRPGLSR--DEMESLQRRVAEAAVFEDDLPFDPAAVSLASPETEHQTLTEATAL 73
Query: 95 -----------KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPG 143
+ G+D SF + A +VVL + ++V +++ L +PY+PG
Sbjct: 74 DGDADAAADSPPLVAGIDQSFLDDR---ALSAVVVL--RGGEVVERVHAVSDLDLPYIPG 128
Query: 144 FLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVG 203
L+FRE +L L + P +L+ DG+G +H R GLA+H+GV+ + +IGV
Sbjct: 129 LLSFREGGPILDALAELD-----CDPDLLVFDGSGRIHFRQAGLATHLGVVCDAPSIGVA 183
Query: 204 KNL------HHVDGLTHSGVRQLLDAKENNNEDIIPLMGG----SGSTWGVAMRS----T 249
K+L DG G R + A +D + +GG S +T G A +S +
Sbjct: 184 KSLLCGTPDEDADGRPE-GWRTPIRA-----DDSVDPVGGHPADSETTIGYAFQSRQYDS 237
Query: 250 PDTLKPIFISVGHCISLDTAVMIV-KMTCKYRVPEPIRQAD 289
+ P+++S GH +S T V +V +++ Y++PEP R AD
Sbjct: 238 RPVVNPLYVSPGHRLSAATTVELVSRLSGSYKLPEPTRLAD 278
>gi|448377470|ref|ZP_21560166.1| endonuclease V [Halovivax asiaticus JCM 14624]
gi|445655414|gb|ELZ08259.1| endonuclease V [Halovivax asiaticus JCM 14624]
Length = 296
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 43/242 (17%)
Query: 79 STTTNTSTKEEE-EVLLKYIGGVDMSFSKEDPSIACGCIVVLDL--QTLQIVYEDYSLLR 135
S T T+ E+ + + + GVD SF D A IVVL ++V +++
Sbjct: 56 SDTDETADPEDRADGTVPLVAGVDQSFLL-DQDRALSAIVVLRPAGSEWEVVERVHAVTP 114
Query: 136 LQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLA 195
L++PY+PG L+FRE +L+ ++ + P + + DG+G +H R G+A+HIGV+
Sbjct: 115 LEIPYIPGLLSFREGGAILAAVEELTAD-----PDLYLFDGSGRIHFRQAGIATHIGVML 169
Query: 196 NLTTIGVGKNL------HHVDGLTHS---GVRQLLDAKENNNEDIIPLMGGSGS------ 240
+ +IGV K L +GL +R D + N+ + G GS
Sbjct: 170 DAPSIGVAKKLLCGDPVASTEGLAAGERVAIRANADVEGPND------IAGEGSSSEGHD 223
Query: 241 -------TWGVAMRS----TPDT-LKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIRQ 287
T G A++S +P+ + P+++S GH +S TA +++ Y++PEP R
Sbjct: 224 AADPDWPTIGSAVQSKQYDSPNRHVNPLYVSPGHRMSAATAADVVLAFAAGYKLPEPTRL 283
Query: 288 AD 289
AD
Sbjct: 284 AD 285
>gi|417394805|ref|ZP_12156872.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353604331|gb|EHC59149.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
Length = 186
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK-------RLC 136
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV 270
G + L + + PLM G RS P+FI+ GH + TA+
Sbjct: 137 GKFEPLSTEPGA---LSPLM-DKGEQLAWVWRSKARC-NPLFIATGHRAGVGTAL 186
>gi|327311726|ref|YP_004338623.1| Deoxyribonuclease V [Thermoproteus uzoniensis 768-20]
gi|326948205|gb|AEA13311.1| Deoxyribonuclease V [Thermoproteus uzoniensis 768-20]
Length = 221
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 33/240 (13%)
Query: 72 FTWNLPNSTTTNTSTKEEEEVLLKY--IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYE 129
F +L + + + EE L ++ + G+D+++ + + ++ + V
Sbjct: 7 FRIDLARRVQSRLAERVVEEPLGEFDVVVGLDVAYRGD---LGVSVAAAYSVREGKAVGY 63
Query: 130 DYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLAS 189
S+ R+ PYVP L+FRE L+ ++ +K+ A + V+MVDG G+ HP G G+A+
Sbjct: 64 SCSVNRVVFPYVPTLLSFRE---LMPMVRALKRLAISY--DVVMVDGQGIAHPYGLGIAA 118
Query: 190 HIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRST 249
H+GV+ + TIGV K+ D + +L+D + SG G +R
Sbjct: 119 HLGVVLGVPTIGVAKSRLFGDVVGD----RLVDPR-------------SGKVIGAVVRCR 161
Query: 250 PDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
KP+++S+G+ I+LD AV +VK C +P PI A ++ + L++ +T +W
Sbjct: 162 ----KPLYVSIGNRITLDDAVKVVKELCADSSMPLPILLAHNKANE-LKRRAATTAFDKW 216
>gi|448362118|ref|ZP_21550730.1| endonuclease V [Natrialba asiatica DSM 12278]
gi|445648988|gb|ELZ01932.1| endonuclease V [Natrialba asiatica DSM 12278]
Length = 267
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 131/274 (47%), Gaps = 33/274 (12%)
Query: 44 PDPAAQAQLNQWT--EIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLKYIG 98
PD A +L++ +Q E+ + D FT++ L N + + + ++
Sbjct: 8 PDLAPDPELDRAAMEALQREIAAAAVFVDEFTFDREPLTNPLAASATADGDPPTVV---- 63
Query: 99 GVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
G+D SF + E V+ ++ +++ ++ L+ PY+PG L+FRE +L+ L
Sbjct: 64 GIDQSFLTNEAGDQDRALSAVVAVRGGEVIERVAAVTDLETPYIPGLLSFREGGAILAAL 123
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL-----HHVDGL 212
+ P + + DG+G +H R G+A+HIGV+ ++ +IGV K+L
Sbjct: 124 AELS-----VEPDLFLFDGSGRIHFRQAGIATHIGVVRDVPSIGVAKSLLCGTPREETAN 178
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR--STPDT-LKPIFISVGHCISLDTA 269
+G R ++A + L+G + V R +P+ + P+++S GH + +TA
Sbjct: 179 LSTGTRVGIEANAKVDAPEGTLLG-----YAVQTRQYDSPNRYINPLYVSPGHRVGPETA 233
Query: 270 VMI-VKMTCKYRVPEPIRQADIRS----RDYLQK 298
I + + Y++PEP+R AD + RDY+
Sbjct: 234 ADIALALASSYKLPEPVRLADSYATEAKRDYVDS 267
>gi|14600765|ref|NP_147286.1| endonuclease V [Aeropyrum pernix K1]
gi|5104155|dbj|BAA79471.1| endonuclease V [Aeropyrum pernix K1]
Length = 218
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 26/197 (13%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
G+D S+S +D + G V++ L+TL+ V + R+ +PY+PG LAFRE V+
Sbjct: 3 GLDASYSAKD-GVGVGAAVLISLETLEPVDCRVYISRVCIPYIPGLLAFRELAVMAPAAA 61
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVR 218
+ A+ V+MVDG+G+ HPR FG+ASH+GV+ +IGV K + G G
Sbjct: 62 ALSAEAD-----VVMVDGHGIAHPRRFGIASHVGVILERPSIGVAKK--KLVGTLVEGPG 114
Query: 219 QLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK 278
+ ++ G + + + P + +++S GH I+L+ A I + T +
Sbjct: 115 GMYVVQD-------------GERLAIVLGTRP---REVYVSPGHRITLEEAASIARATIR 158
Query: 279 YR--VPEPIRQADIRSR 293
+PEP R AD+ S+
Sbjct: 159 PGGWMPEPTRLADVISK 175
>gi|397773044|ref|YP_006540590.1| deoxyribonuclease V [Natrinema sp. J7-2]
gi|397682137|gb|AFO56514.1| deoxyribonuclease V [Natrinema sp. J7-2]
Length = 263
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 136/266 (51%), Gaps = 30/266 (11%)
Query: 44 PDPAAQAQLNQWT--EIQDELKKRLITEDFFTWNLPNSTT---TNTSTKEEEEVLLKYIG 98
PD A A L++ +Q E+ ED F ++ P++ + +T+ + V++
Sbjct: 6 PDLAPDADLSREAMEALQREIAAVATFEDDFAFD-PDALSNPLASTADGGQPPVVV---- 60
Query: 99 GVDMSFSKEDPSIACGCI-VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GVD SF D + V+ + +++ +++ L+ PY+PG L+FRE +L+ L
Sbjct: 61 GVDQSFLTNDAGDQDRALSAVVATRGGEVIERVHAVTPLENPYIPGLLSFREGAPILAAL 120
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGV 217
+ + P++ + DG+G +H R G+A+H+GV+ ++ +IGV K+L +
Sbjct: 121 EKLS-----VDPELCLFDGSGRIHFRQAGIATHMGVVRDVPSIGVAKSLLCGTPRADTDD 175
Query: 218 RQL---LDAKENNNEDIIPLMGGSGSTWGVAMRS----TPD-TLKPIFISVGHCISLDTA 269
RQ + + N D +G+ G A+++ +P+ ++ P+++S GH + +TA
Sbjct: 176 RQTGTKIPIESNARVD-----APNGTVLGYAVQTRQYDSPNRSINPLYVSPGHRVGPETA 230
Query: 270 VMI-VKMTCKYRVPEPIRQADIRSRD 294
I + + Y++PEPIR AD + D
Sbjct: 231 ADIALALASSYKLPEPIRLADKYAAD 256
>gi|417354158|ref|ZP_12130669.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353562544|gb|EHC29150.1| Endonuclease V, partial [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
Length = 135
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 68/110 (61%), Gaps = 6/110 (5%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+ + ++ P +L VDG+G+ HPR G+ASH G+L ++ TIGV K
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKK 133
>gi|448472537|ref|ZP_21601161.1| endonuclease V [Halorubrum aidingense JCM 13560]
gi|445819841|gb|EMA69675.1| endonuclease V [Halorubrum aidingense JCM 13560]
Length = 288
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 110/209 (52%), Gaps = 32/209 (15%)
Query: 99 GVDMSF----SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
GVD +F ED +++ + + D ++ + L +PYVPG LAFRE +L
Sbjct: 84 GVDQAFLTPSDGEDRAVSA-AVAIRDGAVIEYAS---ATTPLSIPYVPGLLAFREGEPML 139
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDGL 212
+ LD + P +L+ DG+G +H R G+A+H+GVL ++ ++GV K+L D
Sbjct: 140 AALDALD-----VEPDLLVCDGSGRIHFREAGVATHVGVLRDVPSVGVAKSLLCGAPDDS 194
Query: 213 TH---SGVRQLLDAKEN------NNEDIIPLMGGSGSTWGVAMRSTPDT--LKPIFISVG 261
T+ +G R + A + + + P++G + + R P++ + P+++S G
Sbjct: 195 TNERPAGWRTPVRADASVETADVDTDTAAPVIGHAYQS-----RQYPNSRRVNPLYVSPG 249
Query: 262 HCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
H ++ +TA +V+ C Y++PEP R AD
Sbjct: 250 HRVAAETAADLVEALCAGYKLPEPTRLAD 278
>gi|325924559|ref|ZP_08186074.1| Endonuclease V [Xanthomonas gardneri ATCC 19865]
gi|325544963|gb|EGD16302.1| Endonuclease V [Xanthomonas gardneri ATCC 19865]
Length = 281
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 94/196 (47%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + G D+ F ++D V+LD TL + + L +PYVPG L+FRE P LL
Sbjct: 85 QVLAGFDVGF-EDDGQTTRAAAVLLDAHTLLPLETHVARLPTSMPYVPGLLSFRELPALL 143
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L + + P ++ +DG G+ HPR G+A+H GV+ L IGV K T
Sbjct: 144 QALALLSR-----TPDLVFIDGQGIAHPRKLGIAAHFGVVTGLPCIGVAKQ-RLAGSFTE 197
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G E I L +G G A+RS P P+ +S GH +S+ A+
Sbjct: 198 PG-------PERGEHSPILL---AGMQIGWALRSKPRC-NPLIVSPGHRVSMQGALEWTL 246
Query: 275 MTCK-YRVPEPIRQAD 289
T + YR+PEP R AD
Sbjct: 247 RTLRAYRLPEPTRLAD 262
>gi|57640841|ref|YP_183319.1| endonuclease V [Thermococcus kodakarensis KOD1]
gi|73921211|sp|Q5JI47.1|NFI_PYRKO RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|57159165|dbj|BAD85095.1| endonuclease V [Thermococcus kodakarensis KOD1]
Length = 197
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 47/203 (23%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PV 152
+K +G VD+S+ E A V+ +++ + + + PY+P F RE PV
Sbjct: 30 IKTVGAVDVSYRDER---ARAAFVLCSFPDCELLKQRVVEVDVSFPYIPTFFFLRETRPV 86
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
L++L K+R P VL+V+G+G HPRG+GLASHIG++ + TIG+ K L
Sbjct: 87 LIAL---GKER-----PDVLLVEGHGRAHPRGYGLASHIGLVLGIPTIGISKRL------ 132
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
L G +W ++ ++SVGH I L +AV +
Sbjct: 133 ---------------------LRGTPEGSWVKVGKA--------YVSVGHLIDLPSAVEV 163
Query: 273 VKMTCKYRVPEPIRQADIRSRDY 295
VK K P P+R AD SR +
Sbjct: 164 VKTLNKNGYPLPLRIADRLSRGH 186
>gi|289667183|ref|ZP_06488258.1| endonuclease V [Xanthomonas campestris pv. musacearum NCPPB 4381]
Length = 235
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
++E + + G D+ F E + V+LD TL + + + +PYVPG L+
Sbjct: 32 RDEVSATPQLLAGFDVGFEDEGQTTRAAA-VLLDAHTLLPLETHVARVPTSMPYVPGLLS 90
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
FRE P LL L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 91 FRELPALLQALALLSR-----MPDLVFIDGQGIAHPRKLGIAAHFGVVTGLPCIGIAKQ- 144
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
T G E + I L+GG+ W A+RS P+ +S GH +S+
Sbjct: 145 RLAGSFTEPG-------PERGDHTPI-LLGGAQIGW--ALRSK-LRCNPLIVSPGHRMSM 193
Query: 267 DTAV-MIVKMTCKYRVPEPIRQAD 289
A+ ++M YR+PEP R AD
Sbjct: 194 QGALDWTLRMLRAYRLPEPTRLAD 217
>gi|448445483|ref|ZP_21590381.1| endonuclease V [Halorubrum saccharovorum DSM 1137]
gi|445685007|gb|ELZ37369.1| endonuclease V [Halorubrum saccharovorum DSM 1137]
Length = 318
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 38/266 (14%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
DPAA A +++ ++ D D LP + + + + V++ G+D +F
Sbjct: 59 DPAAVA-IDEPADLTDG------PPDARQETLPGTDADSDAGDPDAPVVV----GLDQAF 107
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
D + ++ ++ + L +PY+PG LAFRE +L+ LD +
Sbjct: 108 LTPDDGEDRAVSAAVAIRDGDVIEHASATTPLSIPYIPGLLAFREGEPMLAALDALG--- 164
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVDGLTHSGVR 218
P +L+ DG+G +H R G+A+H+GVL ++ ++GV K+L DG G R
Sbjct: 165 --VEPDLLVCDGSGRIHFRAAGVATHVGVLLDVPSVGVAKSLLCGVPDEPTDGRPE-GWR 221
Query: 219 QLLDAKENNNEDIIPLMGGSGSTW------------GVAMRSTPDT--LKPIFISVGHCI 264
+ A ++ ++ G T R P++ + P+++S GH +
Sbjct: 222 TPVRADDSVETAVVDGDASGGDTADGDAPAAPVIGHAYQSRQYPNSRRVNPLYVSPGHRV 281
Query: 265 SLDTAVMIVKMTCK-YRVPEPIRQAD 289
S T V +V+ C Y++PEP R AD
Sbjct: 282 SPATTVDLVEALCAGYKLPEPTRIAD 307
>gi|448313807|ref|ZP_21503519.1| endonuclease V [Natronolimnobius innermongolicus JCM 12255]
gi|445597117|gb|ELY51195.1| endonuclease V [Natronolimnobius innermongolicus JCM 12255]
Length = 249
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 106/201 (52%), Gaps = 20/201 (9%)
Query: 99 GVDMSF-SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLL 157
GVD SF + E V+ ++ ++V +++ L++PY+PG L+FRE +L L
Sbjct: 43 GVDQSFLTNEAGDQDRALSAVVAMRGGEVVERVHAVTSLEIPYIPGLLSFREGRPILEAL 102
Query: 158 DNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDGLTHS 215
+ + P + + DG+G +H R G+A+H+GV+ ++ +IG+ K+L G T
Sbjct: 103 ETLS-----VEPDLALFDGSGRIHFRQAGIATHMGVVRDVPSIGIAKSLLCGEPQGSTEH 157
Query: 216 ---GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR--STPDT-LKPIFISVGHCISLDT- 268
G R ++A E + L+G + V R +PD + P+++S GH + +T
Sbjct: 158 LEVGTRVPIEATERVDAPAGTLLG-----YAVQTRQYESPDRYINPLYVSPGHRVGPETA 212
Query: 269 AVMIVKMTCKYRVPEPIRQAD 289
A + + Y++PEP+R+AD
Sbjct: 213 ADAALALASSYKLPEPVRRAD 233
>gi|357417965|ref|YP_004930985.1| endonuclease V [Pseudoxanthomonas spadix BD-a59]
gi|355335543|gb|AER56944.1| endonuclease V [Pseudoxanthomonas spadix BD-a59]
Length = 235
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 27/207 (13%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
+E + I G+D+ F + + V+LD TLQ++ + +PYVPG L+F
Sbjct: 31 DEAPAAPRTIAGLDVGFEDQGATTRAAA-VLLDGTTLQLLDSVVERVPTAMPYVPGLLSF 89
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL- 206
RE P LL+ L + + P++++VDG G+ HPR G+A+H G+ L TIGV K +
Sbjct: 90 RELPALLAALQRLAQ-----VPELVLVDGQGIAHPRRLGIAAHFGLATGLPTIGVAKKVL 144
Query: 207 ---HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHC 263
G L+ +N E I W M + P+ +S GH
Sbjct: 145 CGRFEPPGPQPGAHTPLV----HNGEQI---------AW---MLRSKARCNPLVVSPGHR 188
Query: 264 ISLDTAV-MIVKMTCKYRVPEPIRQAD 289
+S+D A ++ + YR+PEP R AD
Sbjct: 189 VSMDGARERVMALLRGYRLPEPTRLAD 215
>gi|452206497|ref|YP_007486619.1| endonuclease V [Natronomonas moolapensis 8.8.11]
gi|452082597|emb|CCQ35858.1| endonuclease V [Natronomonas moolapensis 8.8.11]
Length = 245
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 25/202 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
+ GVD +F + A +VVL + +++ + ++ L +PYVPG LAFRE +++
Sbjct: 50 VAGVDQAFLDDR---AVSAVVVL--RGGEVIARESAVTPLSMPYVPGLLAFREGEPIVAA 104
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------HHVD 210
L+ + P +L++DG+G +H R GLA+H+GV ++ +GV K+L D
Sbjct: 105 LEALD-----VDPDLLVLDGSGRIHYREAGLAAHVGVCFDVPAVGVAKSLLCGRPRRATD 159
Query: 211 GLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDT--LKPIFISVGHCISLDT 268
L +G R ++A ++ + ++G + + R PD+ + P+++S GH ++ T
Sbjct: 160 AL-EAGERVPIEADDSMSAPEETVVGHAYQS-----RQYPDSTRINPLYVSPGHRLAAGT 213
Query: 269 AV-MIVKMTCKYRVPEPIRQAD 289
A ++ +Y++P P R AD
Sbjct: 214 ATDLVAACGGEYKLPRPTRLAD 235
>gi|448391557|ref|ZP_21566703.1| endonuclease V [Haloterrigena salina JCM 13891]
gi|445665878|gb|ELZ18553.1| endonuclease V [Haloterrigena salina JCM 13891]
Length = 265
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 130/266 (48%), Gaps = 36/266 (13%)
Query: 42 ASPD--PAAQAQLNQWTEIQDELKKRLITEDFFTWN---LPNSTTTNTSTKEEEEVLLKY 96
A PD P A + + +Q E+ ED F ++ L + +S ++ V+
Sbjct: 4 ARPDLVPDASLERDDMEAMQREIADAAAFEDDFDFDPATLGDPLAAASSGADQPTVV--- 60
Query: 97 IGGVDMSF---SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
GVD SF D A +V + + +++ +++ L++PY+PG L+FRE +
Sbjct: 61 --GVDQSFLTNEAGDQDRALSAVVAM--RGGEVIERVHAVTPLEIPYIPGLLSFREGRPI 116
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL------H 207
L+ L+ + P + + DG+G +H R G+A+H+GV+ + +IGV K+L
Sbjct: 117 LAALEELS-----VDPDLFLFDGSGRIHFRQAGIATHMGVVRDAPSIGVAKSLLCGSPTE 171
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMR--STPDT-LKPIFISVGHCI 264
+ L+ GVR ++A + L+G + V R +P+ + P+++S GH +
Sbjct: 172 DTENLSE-GVRVPIEANSRVDAPDGTLLG-----YAVQTRQYDSPNRYINPLYVSPGHRV 225
Query: 265 SLDT-AVMIVKMTCKYRVPEPIRQAD 289
+T A + + Y++PEP+R AD
Sbjct: 226 GPETAADAALALASSYKLPEPVRLAD 251
>gi|188575599|ref|YP_001912528.1| endonuclease V [Xanthomonas oryzae pv. oryzae PXO99A]
gi|226730073|sp|B2SRM7.1|NFI_XANOP RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|188520051|gb|ACD57996.1| endonuclease V [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 237
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
+E + + G D+ F + S V+LD TL + + + +PYVPG L+F
Sbjct: 33 DEVSATPQLLAGFDVGFEDDGQSTRAAA-VLLDAHTLLPLETHVARVPTSMPYVPGLLSF 91
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE P LL L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 92 RELPALLQALALLSR-----TPDLVFIDGQGIAHPRRLGIAAHFGVVTGLPCIGIAKQ-R 145
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
G E + I L+GG+ W A+RS P P+ +S GH +S+
Sbjct: 146 LAGSFAEPG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHRVSMQ 194
Query: 268 TAVMIVKMTCK-YRVPEPIRQAD 289
A+ T + YR+PEP R AD
Sbjct: 195 GALGWTLRTLRSYRLPEPTRLAD 217
>gi|308459761|ref|XP_003092194.1| hypothetical protein CRE_16453 [Caenorhabditis remanei]
gi|308254035|gb|EFO97987.1| hypothetical protein CRE_16453 [Caenorhabditis remanei]
Length = 284
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 27/225 (12%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIV--YEDYSLLRLQVPYVPGFLAFREAP 151
++ + G+D S S ++P + + +L+ V D +LRL PY+P +LA REA
Sbjct: 60 VQIVAGIDTSASTQNPDMVYVSVSFWKYPSLEHVATVSDTRILRL--PYIPQYLAVREAE 117
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
V+ + + P V++ DG G H R G+A H+G L + +IG+ KNL D
Sbjct: 118 VMADFVRKVISDRPDLRPDVILCDGFGQFHSRDCGMACHVGALTGIPSIGIAKNLALHDV 177
Query: 212 LTHSGV--RQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKP-------------- 255
G+ + +D +N ++ S VA D ++P
Sbjct: 178 YETVGIDKKATVDKFVDNCREVYK------SNKAVAGYIPFDIVEPVKLNILRMGGSMSG 231
Query: 256 IFISVGHCISLDTAVMI-VKMTCKYRVPEPIRQADIRSRDYLQKH 299
+F+S G+ I LD A I +M EPIR AD+ SR ++++
Sbjct: 232 VFVSAGYGIDLDLATTISSRMLLNNTTCEPIRAADLESRRLVREY 276
>gi|390989962|ref|ZP_10260255.1| endonuclease V [Xanthomonas axonopodis pv. punicae str. LMG 859]
gi|372555406|emb|CCF67230.1| endonuclease V [Xanthomonas axonopodis pv. punicae str. LMG 859]
Length = 237
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 19/196 (9%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + G D+ F ++D V+LD QTL + + + +PYVPG L+FRE P LL
Sbjct: 40 QLLAGFDVGF-EDDGQTTRAAAVLLDAQTLLPLETHIARVPTSMPYVPGLLSFRELPALL 98
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 99 QALALLSR-----TPDLVFIDGQGIAHPRKLGIAAHFGVVTGLPCIGIAKQ-RLAGSFAE 152
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
G E + I L+GG+ W A+ S P P+ +S GH +S+ A+
Sbjct: 153 PG-------PERGDHTPI-LLGGAQIGW--ALLSKPRC-NPLIVSPGHRVSMQGALDWTL 201
Query: 275 MTCK-YRVPEPIRQAD 289
T + YR+PEP R AD
Sbjct: 202 RTLRAYRLPEPTRLAD 217
>gi|415799326|ref|ZP_11498775.1| endonuclease V domain protein [Escherichia coli E128010]
gi|323161280|gb|EFZ47190.1| endonuclease V domain protein [Escherichia coli E128010]
Length = 151
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV KN
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKN 133
>gi|374851636|dbj|BAL54590.1| deoxyribonuclease V [uncultured prokaryote]
Length = 225
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 43/243 (17%)
Query: 49 QAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKED 108
Q L + +Q+ LK +L T E +Y+ G D+++ +
Sbjct: 10 QVSLREALALQERLKHKL-------------------TISGEITSFRYVLGCDVAYGRG- 49
Query: 109 PSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFY 168
I V++D++ I+ + PY+PG LAFRE P +L L ++ +
Sbjct: 50 -GIVVAAAVLMDMEKNIILEYKTATGITSFPYIPGLLAFREGPFILRALKRIRGPVD--- 105
Query: 169 PQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHVDGLTHSGVRQLLDAKEN 226
++ DG+G+ HP G+ASHIG+ ++ +IGV K+ + H D ++
Sbjct: 106 --FIVFDGHGIAHPSRMGIASHIGLHIDVPSIGVAKSILIGHADE----------PGRKK 153
Query: 227 NNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPI 285
I L GV +R T D +KP+++S G+ I + A I+K++ +R+PEP+
Sbjct: 154 GEFSFIYL---EEERVGVCLR-TRDGVKPVYVSPGNRIGIIEAKDAILKISKHFRIPEPL 209
Query: 286 RQA 288
R A
Sbjct: 210 RHA 212
>gi|420376142|ref|ZP_14875928.1| endonuclease V [Shigella flexneri 1235-66]
gi|391306807|gb|EIQ64557.1| endonuclease V [Shigella flexneri 1235-66]
Length = 151
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I G D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 31 IAGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+ + ++ P ++ VDG+G+ HPR G+ASH G+L ++ TIGV KN
Sbjct: 90 WEMLSQK-----PDLVFVDGHGISHPRRLGVASHFGLLVDVPTIGVAKN 133
>gi|397579994|gb|EJK51416.1| hypothetical protein THAOC_29410 [Thalassiosira oceanica]
Length = 350
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 40/250 (16%)
Query: 90 EEVLLKYIGGVDMSFS--KEDPSIACGCIVVLD--LQTLQIVYEDYSLLRLQVPYV-PGF 144
E LL+ +GGVD+ FS ED ++A +++ D L++ ++ + ++ V Y+ P
Sbjct: 97 ENRLLR-VGGVDVGFSLIDEDRAVATYVVLLYDSTLESAEVEHRAHTWYEPTVDYLEPRD 155
Query: 145 LAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGK 204
R++ D + Y V + GNGL H R G+A+ +GV +N+ T+GVGK
Sbjct: 156 DTRRDSSGCEFSDDTAMQGLLAIYTNVHLEKGNGLWHQRRAGIATFVGVRSNIPTVGVGK 215
Query: 205 NLHHVDG-LTHSGVRQ-----LLD---AKEN-----NNEDIIP----------------- 233
+ +DG LT + V + LLD +K N N+ II
Sbjct: 216 TFYSIDGNLTKNQVHEQLEQALLDWHGSKPNEYHTFQNDRIIVDDRKIGEFTNVRREGET 275
Query: 234 ---LMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
+ G G G A S+ + PI+ISVG I+L AV I ++PEPIR+AD+
Sbjct: 276 LAYALVGHGGRGGRASVSSRGSKNPIYISVGSGITLQDAVYICAKVSIAKIPEPIREADL 335
Query: 291 RSRDYLQKHQ 300
R +++ +
Sbjct: 336 YGRRLVRERE 345
>gi|222479033|ref|YP_002565270.1| endonuclease V [Halorubrum lacusprofundi ATCC 49239]
gi|222451935|gb|ACM56200.1| Endonuclease V [Halorubrum lacusprofundi ATCC 49239]
Length = 297
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 120/257 (46%), Gaps = 35/257 (13%)
Query: 45 DPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF 104
DPA A +++ ++ D L D LP T NT + V+ G+D +F
Sbjct: 51 DPAVVA-IDEPADLTDGLP------DARQETLPG-THPNTGDPDAPVVV-----GIDQAF 97
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
D + ++ ++ ++ L +PY+PG LAFRE +L+ LD +
Sbjct: 98 LTPDDGEDRAVSAAVAIRDGVVIEYASAITPLSIPYIPGLLAFREGEPILAALDALDAE- 156
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL-----HHVDGLTHSGVRQ 219
P +L+ DG+G +H R G+A+H+GVL ++ ++GV K+L +G R
Sbjct: 157 ----PDLLVCDGSGRIHFREAGIATHVGVLLDVPSVGVAKSLLCGVPDESTDERPAGWRT 212
Query: 220 LLDAKENNNEDIIPLMGGSGSTWGVA----MRSTPDT--LKPIFISVGHCISLDTAVMIV 273
+ A + + G +G + R P++ + P+++S GH +S T V +V
Sbjct: 213 PIRADGS-----VETAGSAGDAPVIGHAFQSRQYPNSRRVNPLYVSPGHRVSPATTVELV 267
Query: 274 KMTCK-YRVPEPIRQAD 289
+ C Y++PEP R AD
Sbjct: 268 EALCAGYKLPEPTRIAD 284
>gi|84623018|ref|YP_450390.1| endonuclease V [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|123522657|sp|Q2P5R1.1|NFI_XANOM RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|84366958|dbj|BAE68116.1| endonuclease V [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 239
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 88 EEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAF 147
+E + + G D+ F + S V+LD TL + + + +PYVPG L+F
Sbjct: 35 DEVSATPQLLAGFDVGFEDDGQSTRAAA-VLLDAHTLLPLETHVARVPTSMPYVPGLLSF 93
Query: 148 REAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLH 207
RE P LL L + + P ++ +DG G+ HPR G+A+H GV+ L IG+ K
Sbjct: 94 RELPALLQALALLSR-----TPDLVFIDGQGIAHPRRLGIAAHFGVVTGLPCIGIAKQ-R 147
Query: 208 HVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
G E + I L+GG+ W A+RS P P+ +S GH +S+
Sbjct: 148 LAGSFAEPG-------PERGDHTPI-LLGGAQIGW--ALRSKPRC-NPLIVSPGHRVSMQ 196
Query: 268 TAVMIVKMTCK-YRVPEPIRQAD 289
A+ T + YR+PEP R AD
Sbjct: 197 GALGWNLRTLRSYRLPEPTRLAD 219
>gi|410670659|ref|YP_006923030.1| deoxyribonuclease V [Methanolobus psychrophilus R15]
gi|409169787|gb|AFV23662.1| deoxyribonuclease V [Methanolobus psychrophilus R15]
Length = 244
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 100/198 (50%), Gaps = 22/198 (11%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
L+ + G+D S+ D I C +V+L +TL+++ + + R+++PY+P +L FRE +
Sbjct: 40 LESVAGIDCSYL--DDRIICA-VVILHYKTLEVIGRKHVIQRVRLPYIPTYLTFREGCAM 96
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ + ++++ P VLM+D G+ HPR G+AS+ G + N TIGV K + +
Sbjct: 97 ATAFEMLEQK-----PDVLMMDSCGINHPRKSGMASYFGAVMNHPTIGVSKKILCGEA-- 149
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
+ A+ +++ G RS PI S G+ +SL + + IV
Sbjct: 150 ------EIPAQVGEYHELVYEEEQIGWVLKTNKRSN-----PIIASPGNKVSLRSCLEIV 198
Query: 274 KMTCK-YRVPEPIRQADI 290
K Y++PEP R A +
Sbjct: 199 SHCLKGYKLPEPTRLAHL 216
>gi|226328704|ref|ZP_03804222.1| hypothetical protein PROPEN_02599 [Proteus penneri ATCC 35198]
gi|225201890|gb|EEG84244.1| deoxyribonuclease V [Proteus penneri ATCC 35198]
Length = 177
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 6/110 (5%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
YI G D+ F ++ ++ IV++ + +I+ + + +PY+PG L+FRE P LL+
Sbjct: 29 YIAGADVGF-EDGGAVTRAAIVIMHYPSFKILEYQIARIPTTLPYIPGLLSFRECPALLT 87
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+K++ P ++ VDG G+ HPR G+ASH G+L + TIGV K+
Sbjct: 88 AWQLIKQK-----PSLIFVDGQGIAHPRRLGVASHFGLLVDTPTIGVAKS 132
>gi|341879039|gb|EGT34974.1| hypothetical protein CAEBREN_21094 [Caenorhabditis brenneri]
Length = 691
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 109/245 (44%), Gaps = 37/245 (15%)
Query: 78 NSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQ 137
+S + + +EE++V L + GVD+S S + + + D V L+
Sbjct: 452 DSAYSVQTVEEEQDVQL--VAGVDISASLSNSDMVFVSVSFWDYPQGTHVATVSDTRCLK 509
Query: 138 VPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANL 197
+PY+P +LA REA V+ + + P VL+ DG G H R G+A H+G L +
Sbjct: 510 LPYIPQYLAVREAEVMADFVRKVIAERPELRPDVLLCDGFGQFHSRDCGMACHVGALTGI 569
Query: 198 TTIGVGKNLHHVDGLTHSGVR------QLLD----AKENNNE-------DIIPLMGGSGS 240
TIGV KNL D G++ Q LD A +NN DI+ +
Sbjct: 570 PTIGVAKNLTLHDTYEAVGMKNKAKVDQFLDSCRQAHKNNKTTSGYIPFDIVEPTKLNIL 629
Query: 241 TWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK------MTCKYRVPEPIRQADIRSRD 294
G +M +F+S G+ I LD A +I TC EPIR AD+ SR
Sbjct: 630 RIGASMSG-------VFVSAGYGIELDLATVISSRLLQNNTTC-----EPIRAADLESRR 677
Query: 295 YLQKH 299
++++
Sbjct: 678 LVREY 682
>gi|171186422|ref|YP_001795341.1| deoxyribonuclease V [Pyrobaculum neutrophilum V24Sta]
gi|170935634|gb|ACB40895.1| Deoxyribonuclease V [Pyrobaculum neutrophilum V24Sta]
Length = 231
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 67/107 (62%), Gaps = 8/107 (7%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
G+D+++S + +A G VV+D+++L + + + VPYVP FLAFRE +L
Sbjct: 32 GLDVAYSGD---VAYGAAVVVDVRSLAVTEAACAATKNLVPYVPTFLAFRELTPMLRAYV 88
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
++ + P V++VDG+G+ HPR FG+ASHIGV+ T+GV K+
Sbjct: 89 KLR-----YQPDVVLVDGHGVAHPRRFGIASHIGVVLKRPTVGVAKS 130
>gi|300711872|ref|YP_003737686.1| endonuclease V [Halalkalicoccus jeotgali B3]
gi|448295562|ref|ZP_21485626.1| endonuclease V [Halalkalicoccus jeotgali B3]
gi|299125555|gb|ADJ15894.1| endonuclease V [Halalkalicoccus jeotgali B3]
gi|445583661|gb|ELY37990.1| endonuclease V [Halalkalicoccus jeotgali B3]
Length = 244
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 41/209 (19%)
Query: 99 GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
GVD +F E A IV + + +++ ++ L +PY+PG L+FRE +L+ +
Sbjct: 47 GVDQAFPDEQ---AVSAIVAM--RDGEVIERTSAVTDLSIPYIPGLLSFREGESILAAFE 101
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVR 218
++ P + + DG+G +H R GLA+H+GV +L ++GV K+L
Sbjct: 102 TLECE-----PDLALFDGSGRIHYREAGLATHMGVALDLPSVGVAKSL------------ 144
Query: 219 QLLDAKENNNEDI------IPLMGGS------GSTWGVAMRS-----TPDTLKPIFISVG 261
L N E+ +P++ G+ G A+++ + P+++S G
Sbjct: 145 -LCGRLSNPPEEPFAEGTRVPILANGRVEVEEGNVLGYAVQTRQYDGGSRYINPLYVSPG 203
Query: 262 HCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
H + +TA + + C Y++PEPIR+AD
Sbjct: 204 HRVGPETAAGLAEAHCAGYKLPEPIRRAD 232
>gi|392891338|ref|NP_001021940.2| Protein C08H9.3, isoform a [Caenorhabditis elegans]
gi|408360320|sp|P52887.3|ALG8_CAEEL RecName: Full=Probable dolichyl pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase; AltName:
Full=Asparagine-linked glycosylation protein 8 homolog;
AltName:
Full=Dol-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichyl
alpha-1,3-glucosyltransferase; AltName:
Full=Dolichyl-P-Glc:Glc1Man9GlcNAc2-PP-dolichyl
glucosyltransferase
gi|371570801|emb|CAA91145.3| Protein C08H9.3, isoform a [Caenorhabditis elegans]
Length = 766
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 26/258 (10%)
Query: 55 WTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACG 114
W + ++++RLI + ST + + ++ ++V K + G+D S +K + +
Sbjct: 514 WAKATCQIRERLIRD---------STYSVQAVEDLDDV--KLVAGIDTSAAKLNSDMVYI 562
Query: 115 CIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMV 174
+ L+ V L++PY+P +LA REA V+ L ++ P V++
Sbjct: 563 SVSFWTYPDLKHVATISDTRMLELPYIPQYLAVREAEVMADFLKSVITERPELRPDVILC 622
Query: 175 DGNGLLHPRGFGLASHIGVLANLTTIGVGKN--LHHV--------DGLTHSGVRQLLDAK 224
DG G H RG G+A H+G L+ + +IGV KN LHH S V +
Sbjct: 623 DGFGEFHSRGCGMACHVGALSGIASIGVAKNLTLHHTYETIGMENKSKVDSFVEHCREVY 682
Query: 225 ENNNED--IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV-KMTCKYRV 281
+NN IP + + ++ +F+S G+ I L+ + I ++
Sbjct: 683 KNNKTSPGFIPFDIVEPVVLNILRMGS--SMNGVFVSAGYGIDLELSTEICSQLLLNNTT 740
Query: 282 PEPIRQADIRSRDYLQKH 299
EPIR AD+ SR ++++
Sbjct: 741 IEPIRAADLESRRLVREN 758
>gi|268529266|ref|XP_002629759.1| Hypothetical protein CBG00995 [Caenorhabditis briggsae]
Length = 690
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 116/273 (42%), Gaps = 54/273 (19%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
W + L+++LI + T + T E+E+ + + + GVD S S +P +
Sbjct: 436 SWQKATCRLREQLIRD----------MTYSVQTVEDEQDV-QIVAGVDTSASSSNPDMVY 484
Query: 114 GCIVVLDLQTLQ--IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
+ LQ D +LRL PY+P +LA REA V+ + + P V
Sbjct: 485 VSVSFWKYPGLQHLATISDTRILRL--PYIPQYLAVREAEVVADFVRTVIAERPELRPDV 542
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL-----HHVDGL-THSGVRQLLDA-- 223
++ DG G H R G+A H+G L + +IG+ KNL + G+ S V Q +D+
Sbjct: 543 ILCDGFGRFHSRSCGMACHVGALTGIPSIGIAKNLALHDVYETVGIDKKSKVDQFVDSCR 602
Query: 224 ---KENNN-EDIIPL------------MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLD 267
K N IP MGGS S +F+S G+ I LD
Sbjct: 603 EIYKSNKPVPGFIPFDIVEPVKLNILRMGGSMSG--------------VFVSAGYGIDLD 648
Query: 268 TAVMI-VKMTCKYRVPEPIRQADIRSRDYLQKH 299
A I K EPIR AD+ SR ++++
Sbjct: 649 LATTISSKFLLNNTTCEPIRAADLESRRLVREN 681
>gi|315230332|ref|YP_004070768.1| endonuclease V [Thermococcus barophilus MP]
gi|315183360|gb|ADT83545.1| endonuclease V [Thermococcus barophilus MP]
Length = 190
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 104/250 (41%), Gaps = 71/250 (28%)
Query: 48 AQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKE 107
A + E+Q +L KR++ + + K IG VD+S+ K
Sbjct: 4 ANVNFKKIAEVQRKLSKRIVEKPLDISRI------------------KTIGAVDVSYKKG 45
Query: 108 DPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PVLLSLLDNMKKRANH 166
A V+ + +I+ + PY+P F RE PVLL++ R
Sbjct: 46 K---AKAAFVLCSFPSCEILKAKVIETNVDFPYIPTFFFLRETRPVLLAI------RGET 96
Query: 167 FYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKEN 226
F VL+V+G+G HPRG+GLASHIG+L TIG+ K
Sbjct: 97 F--DVLLVEGHGKAHPRGYGLASHIGLLLKKPTIGIAKK--------------------- 133
Query: 227 NNEDIIPLMG---GSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPE 283
PL G GS G A ++SVG+ I L++A IV+M + P+
Sbjct: 134 ------PLRGYPEGSLVKVGKA-----------YVSVGNLIDLNSAAKIVEMVNENGYPK 176
Query: 284 PIRQADIRSR 293
P++ AD S+
Sbjct: 177 PLKIADKLSK 186
>gi|448503527|ref|ZP_21613157.1| endonuclease V [Halorubrum coriense DSM 10284]
gi|445692286|gb|ELZ44466.1| endonuclease V [Halorubrum coriense DSM 10284]
Length = 287
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 107/205 (52%), Gaps = 27/205 (13%)
Query: 99 GVDMSF----SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
GVD +F + P A +V L T +V + L +PYVPG LAFRE +L
Sbjct: 85 GVDQAFLTDREGDRPDAAVSAVVALRGGT--VVEYASATTPLSIPYVPGLLAFREGEPIL 142
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDGL 212
+ LD + +L+ DG+G +H R GLA+H+GVL ++ ++GV K+L D
Sbjct: 143 AALDALDADP-----DLLVCDGSGRIHFREAGLATHVGVLRDVPSVGVAKSLLCGEPDES 197
Query: 213 TH---SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRST--PDT--LKPIFISVGHCIS 265
T +G R + A +D +P G+ G A +S P++ + P+++S GH +S
Sbjct: 198 TDERPAGWRTPIRA-----DDAVP-TAEPGTVIGHAFQSRQYPNSKRVNPLYVSPGHRVS 251
Query: 266 LDTAVMIVKMTCK-YRVPEPIRQAD 289
+TAV +V C Y++PEP R AD
Sbjct: 252 AETAVDLVAALCAGYKLPEPTRLAD 276
>gi|240102972|ref|YP_002959281.1| Endonuclease V (Deoxyinosine 3' endonuclease) (nfi) [Thermococcus
gammatolerans EJ3]
gi|239910526|gb|ACS33417.1| Endonuclease V (Deoxyinosine 3' endonuclease) (nfi) [Thermococcus
gammatolerans EJ3]
Length = 197
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 47/194 (24%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PVLLS 155
+G VD+S+ E A V+ +++ ++ PY+P F RE P L++
Sbjct: 34 VGAVDVSYKGEK---ARSAFVLCSFPECRLLKARTIETTVRFPYIPTFFFLRETKPALMA 90
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ K+R P VL+V+G+G HPRG+GLASHIG++ N+ TIG+ K L
Sbjct: 91 I---GKER-----PDVLLVEGHGRAHPRGYGLASHIGLILNVPTIGIAKRLLR------- 135
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKM 275
N E GS + G A ++SVGH I L +AV IVK
Sbjct: 136 ----------NTPE-------GSWAKVGKA-----------YVSVGHLIDLPSAVKIVKA 167
Query: 276 TCKYRVPEPIRQAD 289
+ P P++ AD
Sbjct: 168 LSRGGYPLPLKLAD 181
>gi|449018751|dbj|BAM82153.1| similar to endonuclease [Cyanidioschyzon merolae strain 10D]
Length = 331
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 17/136 (12%)
Query: 73 TWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYS 132
+W + T+ + E++ L GVD+++ + + C +V+ + + +++ +
Sbjct: 25 SWIQTTGSAPATTKSDLEQLRL---AGVDVAWDR----VPCTAALVIPGRLGAVEHQNPA 77
Query: 133 LLRLQVP-YVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHI 191
QVP YVP FLA+REAP++ SL+ ++ + VL+VDGNG+LHPR FGLAS I
Sbjct: 78 ----QVPPYVPAFLAYREAPLVRSLVLRHRQDLD-----VLLVDGNGILHPRRFGLASAI 128
Query: 192 GVLANLTTIGVGKNLH 207
GV + TIGV K H
Sbjct: 129 GVECGVRTIGVAKTYH 144
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 243 GVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQADIRSRDYLQKHQS 301
G A+R+ + PI++S+GH I L AV +V + +R+PEP+R AD +R L ++
Sbjct: 238 GAAVRTGKRAVNPIYVSIGHGIDLSRAVALVYAAAREHRLPEPLRMADQLARGTLASSEA 297
Query: 302 T 302
+
Sbjct: 298 S 298
>gi|448424449|ref|ZP_21582423.1| endonuclease V [Halorubrum terrestre JCM 10247]
gi|445682177|gb|ELZ34598.1| endonuclease V [Halorubrum terrestre JCM 10247]
Length = 289
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 40/301 (13%)
Query: 5 GVQQPHLRREFHSIPEQMSSCYRSYMENYCEEEREALASPDPAAQAQLNQWTEIQDEL-- 62
G+ +P LR + +M R E+ L DP A A + + T + D L
Sbjct: 2 GLARPDLRPDPSLSRAEMEGLQRDIAAAATFEDDHGL---DPPAVA-VEEATSLADGLPP 57
Query: 63 -----KKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF----SKEDPSIAC 113
++RL T D + +T+ + ++ GVD +F + P A
Sbjct: 58 ARDGAQERLGTGD--------EGSADTTPDPDGPTVV----GVDQAFLTDRDGDRPDAAV 105
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
V T +V + L +PYVPG LAFRE + A P +L+
Sbjct: 106 SAAVAFRAGT--VVEYASATTPLSIPYVPGLLAFREGGPI-----LAALGALDAAPDLLV 158
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIP 233
DG+G +H R GLA+H+GVL + ++GV K+L + + R +D +
Sbjct: 159 CDGSGRIHFREAGLATHVGVLRDTPSVGVAKSLLCGEPDESTSERPEGWRTPVRADDAV- 217
Query: 234 LMGGSGSTWGVAMRST--PDT--LKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQA 288
G+ G A +S P++ + P+++S GH +S +TAV V C Y++PEP R A
Sbjct: 218 TTAEPGTVIGHAFQSRQYPNSGRVNPLYVSPGHRVSAETAVEFVAALCAGYKLPEPTRLA 277
Query: 289 D 289
D
Sbjct: 278 D 278
>gi|390960303|ref|YP_006424137.1| endonuclease V [Thermococcus sp. CL1]
gi|390518611|gb|AFL94343.1| endonuclease V [Thermococcus sp. CL1]
Length = 189
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 47/197 (23%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PV 152
+K + VD+++ KED A V+ +V + + + PYVP F RE PV
Sbjct: 31 IKTVAAVDVAY-KED--TARAGFVLCSFPECAVVKAKFMEMEVSAPYVPTFFFLRETRPV 87
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
LL++ R F VL+V+G+G HPRG+GLASHIG+L TIGV K
Sbjct: 88 LLAV------RGESF--DVLLVEGHGKAHPRGYGLASHIGLLVGRPTIGVAKR------- 132
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
PL G R++ + ++SVGH I+L++A+ I
Sbjct: 133 --------------------PLRGSP--------RNSFKRVGKAYVSVGHLINLESALRI 164
Query: 273 VKMTCKYRVPEPIRQAD 289
V+ P P++ AD
Sbjct: 165 VESLLDEGYPMPLKLAD 181
>gi|307595678|ref|YP_003901995.1| deoxyribonuclease V [Vulcanisaeta distributa DSM 14429]
gi|307550879|gb|ADN50944.1| Deoxyribonuclease V [Vulcanisaeta distributa DSM 14429]
Length = 257
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 43/232 (18%)
Query: 57 EIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF-SKEDPSIACGC 115
IQ L +++ ED N+ N + + GVD+++ + D I
Sbjct: 27 SIQRALASKVVEEDLV--NIDN---------------VDLVSGVDVAYINHGDVEIGVSV 69
Query: 116 IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFRE-APVLLSLLDNMKKRANHFYPQVLMV 174
L I+ + + PYVP L+FRE PV+ + L K PQV+++
Sbjct: 70 ASTYSLSNSSIIEWSCWVGPVTFPYVPTLLSFRELKPVVNAYLRLRTK------PQVVLI 123
Query: 175 DGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPL 234
DG+G HP G+ASH GV + TIGV K+L + +D E D+
Sbjct: 124 DGHGRAHPYRLGIASHFGVCMRIPTIGVAKSLLY----------GKVDRVEGPILDV--- 170
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC-KYRVPEPI 285
G+ G A+R P KP ++SVG+ +SL +AV ++K C ++P PI
Sbjct: 171 --GTNEVIGWAIRCAPG--KPTYVSVGYGVSLGSAVNLIKRLCVGSQMPIPI 218
>gi|343959768|dbj|BAK63741.1| hypothetical protein [Pan troglodytes]
Length = 273
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%)
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQAD 289
D PL+G SG+ G+A+RS + +P++ISVGH +SL+ AV + C++R+PEP+RQAD
Sbjct: 145 DSFPLLGDSGTVLGMALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRFRIPEPVRQAD 204
Query: 290 IRSRDYLQK 298
I SR++++K
Sbjct: 205 ISSREHIRK 213
>gi|409095611|ref|ZP_11215635.1| endonuclease V [Thermococcus zilligii AN1]
Length = 194
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 86/207 (41%), Gaps = 59/207 (28%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQV-------PYVPGFLA 146
+K +GGVD+S+ E A + + D LLR + PYVP F
Sbjct: 27 VKTVGGVDVSYKGEKARAAF----------VLCSFPDCRLLRFRTVETEVAFPYVPTFFF 76
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
RE + + K P VL+V+G G HPRG+GLASHIG++ + TIGV K
Sbjct: 77 LRETKPAIMAIGKEK-------PGVLLVEGQGKAHPRGYGLASHIGLVLGIPTIGVAKK- 128
Query: 207 HHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISL 266
PL G +W ++ ++SVGH + L
Sbjct: 129 --------------------------PLRGSPPGSWARVGKA--------YVSVGHLVDL 154
Query: 267 DTAVMIVKMTCKYRVPEPIRQADIRSR 293
+AV IVK P P++ AD S+
Sbjct: 155 ASAVEIVKALSLDGYPLPLKLADRFSK 181
>gi|429216736|ref|YP_007174726.1| deoxyinosine 3'endonuclease [Caldisphaera lagunensis DSM 15908]
gi|429133265|gb|AFZ70277.1| deoxyinosine 3'endonuclease (endonuclease V) [Caldisphaera
lagunensis DSM 15908]
Length = 256
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 24/200 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
K I VD S++K D I G + + + I+ + ++ +PY+PG LAFRE ++
Sbjct: 45 KVIAAVDASYTKNDLGI--GVAIAFEYPSYNIIDCELIARKVCIPYIPGLLAFREMYLIS 102
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ + K PQVL VDG+G HPR G+A+HIG++ ++ TIG+ K
Sbjct: 103 T---PLLKLLKKVKPQVLFVDGHGYAHPRFAGIATHIGIVFDIPTIGIAK---------- 149
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
++L+ + N ++ + + + + K I++S G+ ISL+ + I K
Sbjct: 150 ---KKLVGEEVVENNELYLRFKDRLVSKILLINN-----KKIYVSPGNKISLENSFNITK 201
Query: 275 -MTCKYRVPEPIRQADIRSR 293
M K+ +P PI AD S+
Sbjct: 202 LMIGKFNLPIPIYLADKLSK 221
>gi|170289839|ref|YP_001736655.1| deoxyribonuclease V [Candidatus Korarchaeum cryptofilum OPF8]
gi|170173919|gb|ACB06972.1| Deoxyribonuclease V [Candidatus Korarchaeum cryptofilum OPF8]
Length = 294
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 27/172 (15%)
Query: 44 PDPAAQAQLNQWTEIQDELKKRLITEDFF----TWNLPNSTTTNTSTKEEEEVLLKYIG- 98
P P A+ +L + I+ R +FF W + ++ K E+++L +G
Sbjct: 71 PIPGAEEKLREEGGIE-----RAKMGNFFRELDVWPIFKVMASD-QVKLSEKLILSELGD 124
Query: 99 -----GVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
GVD+S+ +D ++AC V +L+ +++ +E +S Q+PYVP +LAFRE +
Sbjct: 125 VSVAAGVDVSYI-DDRAVACCVTVDEELKIIEVRFERFSP---QIPYVPTYLAFRELRGM 180
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
L + +MK + + VDG+G+LHPRG G ASH+G+L +IGV K+
Sbjct: 181 LPV--SMKCDFDAIF-----VDGHGVLHPRGLGEASHLGLLLGKPSIGVAKS 225
>gi|159041809|ref|YP_001541061.1| deoxyribonuclease V [Caldivirga maquilingensis IC-167]
gi|157920644|gb|ABW02071.1| Deoxyribonuclease V [Caldivirga maquilingensis IC-167]
Length = 228
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 26/151 (17%)
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PYVP L+FRE ++ +K+R P V+++DG+G+ HP G+A+H GV+ L
Sbjct: 86 PYVPTLLSFRELSPMIKAFMRLKER-----PHVVLIDGHGVAHPYRLGIAAHFGVVMGLP 140
Query: 199 TIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
TIGV K+ L + V++ L +N E I GV + +++
Sbjct: 141 TIGVAKS------LLYGEVKESLIIDPSNGEVI----------GGVVKCGRHE----VYV 180
Query: 259 SVGHCISLDTAVMIVKMTC-KYRVPEPIRQA 288
SVG+ I+LD A+ +V C + R+PEPI A
Sbjct: 181 SVGNMITLDNALTLVSRLCLRDRMPEPILHA 211
>gi|18977359|ref|NP_578716.1| hypothetical protein PF0987 [Pyrococcus furiosus DSM 3638]
gi|397651493|ref|YP_006492074.1| endonuclease V [Pyrococcus furiosus COM1]
gi|56404413|sp|Q8U263.1|NFI_PYRFU RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|18893038|gb|AAL81111.1| hypothetical protein PF0987 [Pyrococcus furiosus DSM 3638]
gi|393189084|gb|AFN03782.1| endonuclease V [Pyrococcus furiosus COM1]
Length = 191
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 48/202 (23%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PV 152
+K +G VD+S+ + A V ++ + +I+ + ++ PY+P F RE P+
Sbjct: 28 VKRVGAVDVSYKN---NFAKAAFVCVEFPSGEIIKTKTIVTTVEFPYIPTFFFLRETKPI 84
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
LL++ D +F VL+V+G+G HPR +GLASHIGV+ + TIGV K L
Sbjct: 85 LLAVKDE------NF--DVLLVEGHGKAHPRRYGLASHIGVILSKPTIGVAKRL------ 130
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
L G S T+ ++ F+SVG+ I+L+ AV I
Sbjct: 131 ---------------------LRGVSKDTYVKVGKA--------FVSVGNLITLNDAVRI 161
Query: 273 V-KMTCKYRVPEPIRQADIRSR 293
V K+ + P+P+ AD S+
Sbjct: 162 VEKLLDENGYPKPLNIADKLSK 183
>gi|374327639|ref|YP_005085839.1| Endonuclease V [Pyrobaculum sp. 1860]
gi|356642908|gb|AET33587.1| Endonuclease V [Pyrobaculum sp. 1860]
Length = 218
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 10/113 (8%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFRE-APV 152
++ + G+D+++ + A G V + + L + S+ + VPYVP FLAFRE P+
Sbjct: 27 VEIVAGLDVAYVGD---TALGAAVAVRMADLSLADRACSVTKSVVPYVPTFLAFRELTPM 83
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
L + MK RA P V++VDG+G+ HPR FG+ASH+GV+ TIGV K+
Sbjct: 84 LRAY---MKLRAK---PDVILVDGHGVAHPRRFGIASHLGVVLGKPTIGVAKS 130
>gi|352682835|ref|YP_004893359.1| endonuclease V [Thermoproteus tenax Kra 1]
gi|350275634|emb|CCC82281.1| endonuclease V [Thermoproteus tenax Kra 1]
Length = 220
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 106/216 (49%), Gaps = 32/216 (14%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
++Y+ GVD+++ + +A VV + + + S+ ++ PYVP L+FRE L
Sbjct: 31 VQYVVGVDVAYKGD---VAFSAAVVYSVNEGRPLEYGCSINKVVFPYVPTLLSFRE---L 84
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ ++ ++K F V++VDG G+ HP GLA+H+GV + +IGV K+
Sbjct: 85 MPIVRALRKIKTKF--DVVLVDGQGIAHPYKLGLAAHLGVALGIASIGVAKS------KL 136
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
+ +R L E I L V R +P+++SVG+ ++LD AV IV
Sbjct: 137 YGEIRGNLIQDPRTGEVIGAL---------VICR------RPLYVSVGNMVTLDDAVNIV 181
Query: 274 KMTCKY-RVPEPIRQADIRSRDYLQKHQSTCLLQRW 308
+ CK +PEP+ A ++ + K + +W
Sbjct: 182 RSLCKTSSMPEPLLLAHNKANEL--KRRQPAEFDKW 215
>gi|302348748|ref|YP_003816386.1| endonuclease V [Acidilobus saccharovorans 345-15]
gi|302329160|gb|ADL19355.1| Endonuclease V [Acidilobus saccharovorans 345-15]
Length = 269
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 102/203 (50%), Gaps = 25/203 (12%)
Query: 95 KYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
+ + VD ++ + + +V+D+ T + V Y+ + +PYVPG LAFRE ++
Sbjct: 43 RTLAAVDAAYWGQGSTFGVAAALVVDV-TSRSVECYYAYGPVCIPYVPGLLAFRELELMT 101
Query: 155 -SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+L+ R +L+VDG+G+ HPRGFG+ASH+GV L ++GV K
Sbjct: 102 PALIKATSGRGV----DLLLVDGHGIAHPRGFGIASHLGVALRLPSVGVAKG-------- 149
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIV 273
LL +E + + G + G +R+ T I++S G+ + L +V +V
Sbjct: 150 ------LLYGREVPCDYGTCIYIGDAAV-GAVLRAP--TGSRIYVSPGNLVGLKYSVDVV 200
Query: 274 K--MTCKYRVPEPIRQADIRSRD 294
+ + R+P P++ AD S+D
Sbjct: 201 RSLLVDGLRLPYPLQAADAISKD 223
>gi|385805285|ref|YP_005841683.1| Endonuclease V [Fervidicoccus fontis Kam940]
gi|383795148|gb|AFH42231.1| Endonuclease V [Fervidicoccus fontis Kam940]
Length = 222
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 28/163 (17%)
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
++++PY+PGFL FRE PV + + ++ + +L+VDG+G+ HPR G A+H+G+
Sbjct: 77 KIRIPYIPGFLGFREVPVAAAAVSILRDFVDI---DLLLVDGHGIAHPRFSGSATHLGLA 133
Query: 195 ANLTTIGVGKNLHHVDGLTHSG---VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPD 251
++ TIGV K+L D + G + +L K + S P+
Sbjct: 134 LDIPTIGVAKSLLVYDKIDEEGNFFYKGILIGK---------------------ILSYPE 172
Query: 252 TLKPIFISVGHCISLDTAVMIVK-MTCKYRVPEPIRQADIRSR 293
+ ++IS G+ I L+ A IVK + K +P P+ AD S+
Sbjct: 173 NARKLYISPGYKIPLEKAFEIVKNLRKKPGLPFPLNYADKISK 215
>gi|294495361|ref|YP_003541854.1| deoxyribonuclease V, partial [Methanohalophilus mahii DSM 5219]
gi|292666360|gb|ADE36209.1| Deoxyribonuclease V [Methanohalophilus mahii DSM 5219]
Length = 165
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 19/166 (11%)
Query: 124 LQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPR 183
++ V + + ++ PY+PG+ +FRE + + + P +LM++ G+ HP
Sbjct: 1 MEFVERTFHIGKISFPYIPGYFSFREGEGTIRAYQKLSNK-----PDLLMINACGVTHPA 55
Query: 184 GFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWG 243
G ASHIGV+ + TIG+ K + R + KEN + PL G G G
Sbjct: 56 NAGFASHIGVVLDKPTIGITKRMFC--------GRAKIPQKENEAQ---PLYDG-GKQRG 103
Query: 244 VAMRSTPDTLKPIFISVGHCISLDTAVMI-VKMTCKYRVPEPIRQA 288
++ +T KPI I+VGH S+ + + I +K ++PEP+R A
Sbjct: 104 WLLKVLSET-KPIVITVGHRTSIKSCLEITIKCLKGSKMPEPLRLA 148
>gi|332158916|ref|YP_004424195.1| hypothetical protein PNA2_1276 [Pyrococcus sp. NA2]
gi|331034379|gb|AEC52191.1| hypothetical protein PNA2_1276 [Pyrococcus sp. NA2]
Length = 212
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 56/212 (26%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PVLLS 155
+ VD+S+ + A +V+ I+ + PY+P F RE P+LL+
Sbjct: 27 VAAVDVSYKN---NTARAALVICSFPKPTILRTKIVETNISYPYIPTFFFLRETRPILLA 83
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHS 215
+ + F VLMV+G+G HPRG+GLASHIG+L TIGV K L
Sbjct: 84 I------KGEEF--DVLMVEGHGKAHPRGYGLASHIGLLLGKPTIGVAKKL--------- 126
Query: 216 GVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRST-PDTLK---PIFISVGHCISLDTAVM 271
+R T PD+ + +++SVG+ I+LD AV
Sbjct: 127 ------------------------------LRGTPPDSYRKVGKVYVSVGNLITLDDAVS 156
Query: 272 IV-KMTCKYRVPEPIRQADIRSRDYLQKHQST 302
IV K+ + P+P++ AD S+ + + T
Sbjct: 157 IVEKLLDEGGYPKPLKLADKLSKGKFDEVKDT 188
>gi|389852514|ref|YP_006354748.1| endonuclease V [Pyrococcus sp. ST04]
gi|388249820|gb|AFK22673.1| endonuclease V [Pyrococcus sp. ST04]
Length = 183
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 103/248 (41%), Gaps = 68/248 (27%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + E Q +L KR++ + T +K + VD+S+ E
Sbjct: 2 LEKIAEAQMKLSKRIVEQKLKT--------------------VKTVAAVDVSYRGEK--- 38
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PVLLSLLDNMKKRANHFYPQ 170
A V+ + I+ + PY+P F RE P+LLS+ R F
Sbjct: 39 ARAAYVLASFPSGNILKTKVVECTVSFPYIPTFFFLRETRPILLSI------RGESF--D 90
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
VL+V+G+G HPRG+GLASHIG+L TIGV K
Sbjct: 91 VLLVEGHGKAHPRGYGLASHIGILIKKPTIGVAKK------------------------- 125
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYR-VPEPIRQAD 289
PL G R + +++SVG+ I+LD AV IV+ + P+P++ AD
Sbjct: 126 --PLKG--------VPRELYRKVGKVYVSVGNLITLDDAVRIVRELLDEKGYPKPLKFAD 175
Query: 290 IRSRDYLQ 297
S+ ++
Sbjct: 176 KLSKGKIK 183
>gi|124028411|ref|YP_001013731.1| endonuclease V [Hyperthermus butylicus DSM 5456]
gi|123979105|gb|ABM81386.1| endonuclease V [Hyperthermus butylicus DSM 5456]
Length = 247
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 112/249 (44%), Gaps = 45/249 (18%)
Query: 50 AQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDP 109
+ + + E+Q L +R+++ S K + ++ I G+D ++SK
Sbjct: 4 SSVAKLIELQKRLSRRIVS----------------SLKPMDTASIRRIVGLDAAYSKRYG 47
Query: 110 SIACGCIVVLDLQTLQIVYEDYSLLRLQVP--YVPGFLAFREAPVL---LSLLDNMKKRA 164
+A + D Q L YS+ + P Y+PG LAFREAP+ L LLD+
Sbjct: 48 GVAIAALTTRDGQLLT-----YSVALGEPPLQYIPGLLAFREAPLFYTALRLLDS----- 97
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVG-KNLHHVDGLTHSGVRQLLDA 223
N+ +++VDG+G+ HPR G+ASHIG+ +IGV K L+ + + + A
Sbjct: 98 NY---DLVVVDGHGISHPRRAGIASHIGIAIAKPSIGVAKKKLYGHEQIVSEDCKPPCIA 154
Query: 224 KENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYR--- 280
+ED +G +R+ +++S G LD+A IV + R
Sbjct: 155 GYVVDED-------TGEKLAAIVRTGRSKKSRLYVSPGAYTDLDSATTIVLELLEARKTP 207
Query: 281 VPEPIRQAD 289
+P P AD
Sbjct: 208 LPAPTYHAD 216
>gi|375082257|ref|ZP_09729325.1| endonuclease V [Thermococcus litoralis DSM 5473]
gi|374743145|gb|EHR79515.1| endonuclease V [Thermococcus litoralis DSM 5473]
Length = 186
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 87/202 (43%), Gaps = 51/202 (25%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PV 152
+K + VD+S+ A G V+ + Q++ + PY+P + RE P+
Sbjct: 27 VKRVAAVDVSYKGNQ---ARGAFVLCSFPSCQVLKTKVIETEVNFPYIPTYFFLRETRPI 83
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN-LHHVDG 211
LL + + F VL+V+G+G HPRG+GLASHIG+L N TIGV K LH
Sbjct: 84 LLLI------KGEEF--DVLLVEGHGKAHPRGYGLASHIGLLINKPTIGVAKRPLHGTKD 135
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
G ++SVG+ I LD+A
Sbjct: 136 FVRVG--------------------------------------KAYVSVGNLIDLDSAKK 157
Query: 272 IVKMTCKYRVPEPIRQADIRSR 293
IV++ + P+P+R AD S+
Sbjct: 158 IVEIINENGYPKPLRIADKLSK 179
>gi|408405805|ref|YP_006863788.1| endonuclease V [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408366401|gb|AFU60131.1| endonuclease V [Candidatus Nitrososphaera gargensis Ga9.2]
Length = 203
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 107/238 (44%), Gaps = 55/238 (23%)
Query: 57 EIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCI 116
++Q E+ K+++ +D F + I GVD+++S D + +
Sbjct: 10 KLQKEVAKKVVAKDDFGE-------------------INRICGVDVAYSG-DTAYCSAVV 49
Query: 117 VVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDG 176
+ +LQ L+ V+ + PYV G L REA + +L +K +LMVD
Sbjct: 50 MDRNLQLLESVHAETVATH---PYVSGLLMLREAEPIFHVLKKLKS----VDYDLLMVDA 102
Query: 177 NGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH-SGVRQLLDAKENNNEDIIPLM 235
+G LHPR GLA ++GV + TIGV K+ H+ G G +L
Sbjct: 103 HGQLHPRKCGLACYVGVTLDKPTIGVAKS--HLCGTARPDGFVEL--------------- 145
Query: 236 GGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSR 293
G G + K +++SVGH +SL+TAV IVK EP+R ADI S+
Sbjct: 146 --GGEVLGCVIGKK----KRLYVSVGHRVSLETAVAIVKELG----IEPLRLADINSK 193
>gi|146304132|ref|YP_001191448.1| endonuclease V [Metallosphaera sedula DSM 5348]
gi|145702382|gb|ABP95524.1| Endonuclease V [Metallosphaera sedula DSM 5348]
Length = 200
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 40/199 (20%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I GVD+++ E G VV+ Q+V + R+ PY+PG L REAP+++
Sbjct: 35 ICGVDVAYKGE-----VGVAVVVCDGENQLVKKATG--RVGFPYIPGLLFMREAPLMIRA 87
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSG 216
L ++K P +L+VDG+G+ HPR G+A+ +GVL N+ TIGV K+
Sbjct: 88 LQDLK-------PDLLLVDGHGIAHPRRSGIATVLGVLLNIPTIGVAKS----------- 129
Query: 217 VRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMT 276
R + + E N + + L +G GV + + S G+ +SLD + + +M
Sbjct: 130 -RLVGEVIEENGINYVVL---NGEKVGVKVGKY-------YYSPGNLVSLDDVINLSRMG 178
Query: 277 CKYRVPEPIRQADIRSRDY 295
P +R+AD S+ Y
Sbjct: 179 Y----PRVLREADRLSKVY 193
>gi|341581545|ref|YP_004762037.1| endonuclease V [Thermococcus sp. 4557]
gi|340809203|gb|AEK72360.1| endonuclease V [Thermococcus sp. 4557]
Length = 187
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 47/197 (23%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PV 152
++ + VD+S+ + A +V+ ++ +++ + PY+P + RE PV
Sbjct: 29 VRVVAAVDVSYRENR---ARAALVLCTFPDCHVLGSKTAVVDVTFPYIPTYFFLRETRPV 85
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
LL L R F VL+V+G+G HPRG+GLASHIG+L TIGV K
Sbjct: 86 LLVL------RGEEF--DVLLVEGHGRAHPRGYGLASHIGLLVGRPTIGVAKG------- 130
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
PL G ++ + ++SVGH I L++A I
Sbjct: 131 --------------------PLRGAPEGSF--------RRMGKAYVSVGHLIDLESAARI 162
Query: 273 VKMTCKYRVPEPIRQAD 289
++ + P+P+R AD
Sbjct: 163 IEPLLEGGYPKPLRLAD 179
>gi|448435249|ref|ZP_21586726.1| endonuclease V [Halorubrum tebenquichense DSM 14210]
gi|445684073|gb|ELZ36459.1| endonuclease V [Halorubrum tebenquichense DSM 14210]
Length = 296
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 26/207 (12%)
Query: 99 GVDMSF---SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
G+D +F + P A V + ++ + L +PYVPG LAFRE +L+
Sbjct: 95 GIDQAFLTDRGDAPDAAVSAAVAF--RDGDVIEYASATTPLSIPYVPGLLAFREGDPILA 152
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL--HHVDGLT 213
LD + +L+ DG+G +H R GLA+H+GVL + ++GV KNL D T
Sbjct: 153 ALDALAADP-----DLLICDGSGRIHFREAGLATHVGVLRDAPSVGVAKNLLCGEPDEPT 207
Query: 214 H---SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRS----TPDTLKPIFISVGHCISL 266
G R + A D G+ G A +S T + P+++S GH +S
Sbjct: 208 EERPEGWRTPVRA------DGAVTTAEPGTAIGHAFQSRQYPTSKRVNPLYVSPGHRVSA 261
Query: 267 DTAVMIVKMTCK-YRVPEPIRQADIRS 292
+TAV +V C Y++PEP R AD +
Sbjct: 262 ETAVDLVAALCAGYKLPEPTRFADAHA 288
>gi|448450286|ref|ZP_21592185.1| endonuclease V [Halorubrum litoreum JCM 13561]
gi|445812138|gb|EMA62134.1| endonuclease V [Halorubrum litoreum JCM 13561]
Length = 289
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 98/200 (49%), Gaps = 17/200 (8%)
Query: 99 GVDMSF----SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLL 154
GVD +F + P A V T +V + L +PYVPG LAFRE +L
Sbjct: 87 GVDQAFLTDRDGDRPDAAVSAAVAFRAGT--VVEYASATTPLSIPYVPGLLAFREGEPIL 144
Query: 155 SLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTH 214
+ LD + +L+ DG+G +H R GLA+H+GVL + ++GV K+L +
Sbjct: 145 AALDALDAAP-----DLLVCDGSGRIHFREAGLATHVGVLRDAPSVGVAKSLLCGEPDES 199
Query: 215 SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRST--PDT--LKPIFISVGHCISLDTAV 270
+ R +D + G+ G A +S P++ + P+++S GH +S +TAV
Sbjct: 200 TSERPEGWRTPVRADDAV-TTAEPGTVIGHAFQSRQYPNSKRVNPLYVSPGHRVSAETAV 258
Query: 271 MIVKMTCK-YRVPEPIRQAD 289
V C Y++PEP R AD
Sbjct: 259 EFVAALCAGYKLPEPTRLAD 278
>gi|386002812|ref|YP_005921111.1| Endonuclease V [Methanosaeta harundinacea 6Ac]
gi|357210868|gb|AET65488.1| Endonuclease V [Methanosaeta harundinacea 6Ac]
Length = 241
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 41 LASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGV 100
+A P + + + +Q+E+ ++ E+ F+ EEV IGGV
Sbjct: 1 MAPPSVPSSEERMRLFSLQEEIASLVVLENRFS----------------EEV----IGGV 40
Query: 101 DMSF-SKEDP-SIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLD 158
D +F S ED + V D + + + ++LL PY+PG L+FRE P + +
Sbjct: 41 DQAFISGEDGREMVVSGAVAFD-SSFRPLSRSWALLETTFPYLPGLLSFREGPAAVEAVK 99
Query: 159 NMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
++ + P +L VDG G+ HPR G+AS IGV +L T+GV K +
Sbjct: 100 RLEAK-----PTLLFVDGCGINHPRRAGMASAIGVALDLPTVGVTKRV 142
>gi|448507520|ref|ZP_21615031.1| endonuclease V [Halorubrum distributum JCM 9100]
gi|448523264|ref|ZP_21618617.1| endonuclease V [Halorubrum distributum JCM 10118]
gi|445698475|gb|ELZ50519.1| endonuclease V [Halorubrum distributum JCM 9100]
gi|445701663|gb|ELZ53639.1| endonuclease V [Halorubrum distributum JCM 10118]
Length = 289
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 136/306 (44%), Gaps = 50/306 (16%)
Query: 5 GVQQPHLRREFHSIPEQMSSCYRSYMENYCEEEREALASPDPAAQAQLNQWTEIQDEL-- 62
G+ +P LR + +M R E+ L DPAA A + + T + D L
Sbjct: 2 GLARPDLRPDPSLSRAEMEGLQRDIAAAATFEDDHGL---DPAAVA-VEEATSLADGLPP 57
Query: 63 -----KKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSF----SKEDPSIAC 113
++RL T D + +T+ + ++ GVD +F + P A
Sbjct: 58 ARDGAQERLGTGD--------EGSADTTPDPDGPTVV----GVDQAFLTDRDGDRPDAAV 105
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLM 173
V T +V + L +PYVPG LAFRE +L+ LD + +L+
Sbjct: 106 SAAVAFRAGT--VVEYASATTPLSIPYVPGLLAFREGEPILAALDALDADP-----DLLI 158
Query: 174 VDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKEN-----NN 228
DG+G +H R GLA+H+GVL ++ ++GV K+L L ++ E
Sbjct: 159 CDGSGRIHFREAGLATHVGVLRDVPSVGVAKSL-----LCGEPDEPTVERPEGWRTPVRA 213
Query: 229 EDIIPLMGGSGSTWGVAMRST--PDT--LKPIFISVGHCISLDTAVMIVKMTCK-YRVPE 283
+D + G+ G A +S P++ + P+++S GH +S TAV V C Y++P+
Sbjct: 214 DDAV-TTAEPGTVIGHAFQSRQYPNSKRVNPLYVSPGHRVSAATAVEFVAALCAGYKLPK 272
Query: 284 PIRQAD 289
P R AD
Sbjct: 273 PTRLAD 278
>gi|410721275|ref|ZP_11360616.1| Endonuclease V [Methanobacterium sp. Maddingley MBC34]
gi|410599353|gb|EKQ53907.1| Endonuclease V [Methanobacterium sp. Maddingley MBC34]
Length = 109
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 65/126 (51%), Gaps = 28/126 (22%)
Query: 180 LHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL-------THSGVRQLLDAKENNNEDII 232
+HPRGFGLA +GVL ++ TIGV K L +D + H + KENN+
Sbjct: 1 MHPRGFGLACQVGVLRDVPTIGVAKRL--IDEMYINVATQKHHASHEFQLIKENNH---- 54
Query: 233 PLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRS 292
G G+ + K ++SV H ISL T + IVKMT ++ PEPIRQA I +
Sbjct: 55 ----GLGAFF-----------KGKYVSVSHKISLKTVLDIVKMTSVFKTPEPIRQAHILA 99
Query: 293 RDYLQK 298
+ QK
Sbjct: 100 TETHQK 105
>gi|424794067|ref|ZP_18220092.1| deoxyribonuclease v protein [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422796189|gb|EKU24742.1| deoxyribonuclease v protein [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 162
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 18/142 (12%)
Query: 149 EAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHH 208
+A L + L +++R P ++ VDG G+ HPR G+A+H GV+ L +IGV K L
Sbjct: 19 QARALQATLAMLRQR-----PDLVFVDGQGIAHPRRLGIAAHFGVVTGLPSIGVAKKL-- 71
Query: 209 VDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDT 268
+ D D P++ G T G A+RS P P+ +S GH +++D+
Sbjct: 72 --------LAGRYDEPGPQAGDRSPIV-HRGDTVGWALRSKP-RCNPLIVSPGHRVAVDS 121
Query: 269 AV-MIVKMTCKYRVPEPIRQAD 289
A+ ++ YR+PEPIR AD
Sbjct: 122 ALHWTLRYLRGYRLPEPIRLAD 143
>gi|14521581|ref|NP_127057.1| endonuclease V [Pyrococcus abyssi GE5]
gi|56404427|sp|Q9UYX5.1|NFI_PYRAB RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|5458800|emb|CAB50287.1| nfi endonuclease V [Pyrococcus abyssi GE5]
gi|380742191|tpe|CCE70825.1| TPA: endonuclease V [Pyrococcus abyssi GE5]
Length = 194
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 67/252 (26%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L + E+Q +L KR++ E+E ++ I VD+S+ +
Sbjct: 2 LEKIAEVQKKLSKRIV--------------------EKEVRMVSKIAAVDVSYKGNKARV 41
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PVLLSLLDNMKKRANHFYPQ 170
A +V+ +++ + PY+P F RE P+LL + F
Sbjct: 42 A---LVICSFPDCKVLKTKVLETEVSFPYIPTFFFLRETRPILLVT------KGEEF--D 90
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNED 230
VL+V+G+G HPR +GLASHIG++ TIGV K L + G + R++ A
Sbjct: 91 VLIVEGHGKAHPRKYGLASHIGLILGKPTIGVAKKL--LRGTPENSYRKVGKA------- 141
Query: 231 IIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
++SVG+ I+L AV I++ P+P++ AD
Sbjct: 142 --------------------------YVSVGNMITLKDAVRIIEKLLDGGYPKPLKLADK 175
Query: 291 RSRDYLQKHQST 302
S+ + + ++T
Sbjct: 176 LSKGKISEDENT 187
>gi|407792626|ref|ZP_11139663.1| deoxyribonuclease V [Idiomarina xiamenensis 10-D-4]
gi|407217739|gb|EKE87571.1| deoxyribonuclease V [Idiomarina xiamenensis 10-D-4]
Length = 234
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 94/182 (51%), Gaps = 23/182 (12%)
Query: 115 CIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMV 174
C+ VL+LQ V+E + L PY+PG L++RE P LL+ + NH Y ++LM
Sbjct: 75 CLTVLELQ----VHEQATSL----PYIPGCLSYREGPALLA----ALAKLNHDY-RLLMC 121
Query: 175 DGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPL 234
DG G HP+ G+A+HIG + +IG+ K+ +G + R + E+ ++D
Sbjct: 122 DGQGQSHPQRLGIAAHIGAVLQKPSIGIAKSRLCGNGSEPAAARG--SSSEHWHDDKQQQ 179
Query: 235 MGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTC-KYRVPEPIRQADIRSR 293
+ G W +RS + +K + +S G+ + A+ VK +Y++P P AD S+
Sbjct: 180 LAG---YW---LRSR-EGVKAVLVSAGYGLDQQQALTAVKQCLGRYKLPLPTHLADKLSK 232
Query: 294 DY 295
Y
Sbjct: 233 SY 234
>gi|212223706|ref|YP_002306942.1| endonuclease V [Thermococcus onnurineus NA1]
gi|212008663|gb|ACJ16045.1| endonuclease V [Thermococcus onnurineus NA1]
Length = 189
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 69/152 (45%), Gaps = 44/152 (28%)
Query: 139 PYVPGFLAFREA-PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANL 197
PYVP F RE P+LL L R F +L++DG+G HPRG+GLASH+G+L
Sbjct: 73 PYVPTFFFLRETRPILLVL------RGEDF--DLLLIDGHGKAHPRGYGLASHVGLLIGR 124
Query: 198 TTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIF 257
TIGV K L G ++ ++ +
Sbjct: 125 PTIGVAKKF---------------------------LRGAPERSFVRVGKA--------Y 149
Query: 258 ISVGHCISLDTAVMIVKMTCKYRVPEPIRQAD 289
+SVG+ I LD+A IV+ + P+P+R AD
Sbjct: 150 VSVGYLIDLDSAARIVETLLERDYPKPLRLAD 181
>gi|14590546|ref|NP_142614.1| hypothetical protein PH0661 [Pyrococcus horikoshii OT3]
gi|56404335|sp|O58394.1|NFI_PYRHO RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|3257069|dbj|BAA29752.1| 211aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 211
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 56/215 (26%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PV 152
++ + VD+S+ +E A +V+ +++ + PY+P F RE P+
Sbjct: 24 VRKVAAVDVSYKEEK---ARAALVITTFPEGEVLKTKVIETTVSFPYIPTFFFLRETKPI 80
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
L++ + F VL+V+G+G HPRG+GLASHIGV+ TIGV K L
Sbjct: 81 LIAT------KGETF--DVLIVEGHGKAHPRGYGLASHIGVVLRKPTIGVAKRL------ 126
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTP-DTLK---PIFISVGHCISLDT 268
+++TP DT K +++SVG+ I+L+
Sbjct: 127 ---------------------------------LKNTPKDTYKKVGKVYVSVGNLITLED 153
Query: 269 AVMIVKMTC-KYRVPEPIRQADIRSRDYLQKHQST 302
A I++ + P+P++ AD S+ + + ++T
Sbjct: 154 ATKIIRAILDESGYPKPLKLADKLSKGRIYEVKNT 188
>gi|16081579|ref|NP_393938.1| endonuclease V [Thermoplasma acidophilum DSM 1728]
gi|56404424|sp|Q9HKY3.1|NFI_THEAC RecName: Full=Bifunctional methyltransferase/endonuclease;
Includes: RecName: Full=Probable
methylated-DNA--protein-cysteine methyltransferase;
AltName: Full=O-6-methylbase-DNA-alkyltransferase;
Includes: RecName: Full=Endonuclease V; AltName:
Full=Deoxyinosine 3'endonuclease; AltName:
Full=Deoxyribonuclease V; Short=DNase V
gi|10639630|emb|CAC11602.1| endonuclease V related protein [Thermoplasma acidophilum]
Length = 323
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 42/196 (21%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQ-IVYEDYSLLRLQVPYVPGFLAFREAPV 152
+ + D+S+ + A +V+ D T++ V D + PY+PG+LAFRE
Sbjct: 143 FRTVAAFDVSYEERR---AFASMVIQDGSTIEAYVISD----GINFPYIPGYLAFRE--- 192
Query: 153 LLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGL 212
+ + ++A+ +L++DGNG+LHPR GLA+H GVL + +IGV K+L
Sbjct: 193 -FRFIKKLYRKAD-----LLLIDGNGILHPRFAGLATHAGVLLDRASIGVAKHL------ 240
Query: 213 THSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMI 272
+ ++DII + GV +R K + +S G+ I ++ +
Sbjct: 241 ----------TRSTRHQDIIYM---QDRPVGVMIR------KNMIVSPGNFIDVNGSADT 281
Query: 273 VKMTCKYRVPEPIRQA 288
V+ R P P++ A
Sbjct: 282 VRKMWNDRYPWPLKLA 297
>gi|325967586|ref|YP_004243778.1| deoxyribonuclease V [Vulcanisaeta moutnovskia 768-28]
gi|323706789|gb|ADY00276.1| Deoxyribonuclease V [Vulcanisaeta moutnovskia 768-28]
Length = 257
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PYVP L+FRE +++ ++ ++ QV+++DG+G HP G+ASH GV ++
Sbjct: 93 PYVPTLLSFRELKPVVNAYLRLRTKS-----QVILIDGHGRAHPYRLGIASHFGVCMHIP 147
Query: 199 TIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
TIGV K+L + +D E DI + G A++ P KP ++
Sbjct: 148 TIGVAKSLLY----------GRVDRVEGPILDI-----STDEVIGWAIQCAPS--KPTYV 190
Query: 259 SVGHCISLDTAVMIVKMTC-KYRVPEPI 285
SVG+ +SL +AV +VK C ++P PI
Sbjct: 191 SVGYGLSLRSAVDLVKRLCVGSQMPIPI 218
>gi|284176051|ref|ZP_06390020.1| Deoxyribonuclease V [Sulfolobus solfataricus 98/2]
gi|384432796|ref|YP_005642154.1| Deoxyribonuclease V [Sulfolobus solfataricus 98/2]
gi|261600950|gb|ACX90553.1| Deoxyribonuclease V [Sulfolobus solfataricus 98/2]
Length = 198
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 70/112 (62%), Gaps = 11/112 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+K I VD+++ K + + G V +D+++ + Y+ Y + + PY+PGFL REAP++
Sbjct: 31 VKKICAVDVAY-KGNLGFSVG--VSMDIRSEEYNYKSY-VGEVNFPYIPGFLFMREAPLM 86
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+ ++ ++ Q+L+VDG+G+ HPR G+A+ IGVL + TIGV K+
Sbjct: 87 IKAIEGLE-------CQLLLVDGHGIAHPRKSGIAAVIGVLLDFPTIGVAKS 131
>gi|337284505|ref|YP_004623979.1| endonuclease V [Pyrococcus yayanosii CH1]
gi|334900439|gb|AEH24707.1| endonuclease V [Pyrococcus yayanosii CH1]
Length = 184
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 96/218 (44%), Gaps = 51/218 (23%)
Query: 81 TTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQ--IVYEDYSLLRLQV 138
T +E + +K +G VD+S+ + A + + ++ +V D +
Sbjct: 14 ATRIVERELDLAEVKRVGAVDVSYRDKKARTAFVLCSFPEGEPIRWRVVETDVT-----A 68
Query: 139 PYVPGFLAFREA-PVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANL 197
PYV F RE P+LL++ + F VL+V+G+G HPRG+GLASH+G++
Sbjct: 69 PYVTTFFFLRETRPILLAV------KGEDF--DVLLVEGHGKAHPRGYGLASHVGLILGR 120
Query: 198 TTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIF 257
TIGV K PL G ++ + ++
Sbjct: 121 PTIGVAKK---------------------------PLKGAPEGSF--------RKVGKVY 145
Query: 258 ISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDY 295
+SVGH I L+ AV +VK + P+P++ AD S+ +
Sbjct: 146 VSVGHLIVLEDAVRLVKALLEGGYPKPLKLADKLSKGW 183
>gi|330834728|ref|YP_004409456.1| endonuclease V [Metallosphaera cuprina Ar-4]
gi|329566867|gb|AEB94972.1| endonuclease V [Metallosphaera cuprina Ar-4]
Length = 198
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 57/97 (58%), Gaps = 7/97 (7%)
Query: 129 EDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLA 188
E+ + ++ PYVPG L REAP+++ L+N+ +L+VDG+G+ HPR G+A
Sbjct: 59 ENVVIGKVSFPYVPGLLFMREAPIMIKALENLDY-------DLLLVDGHGIAHPRRSGIA 111
Query: 189 SHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKE 225
+ IGVL N TIGV K+ + + G+ ++D E
Sbjct: 112 TVIGVLLNKPTIGVAKSRLIGEEVVEGGITYIVDKGE 148
>gi|229583816|ref|YP_002842317.1| Deoxyribonuclease V [Sulfolobus islandicus M.16.27]
gi|259511734|sp|C3N187.1|NFI_SULIA RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|228018865|gb|ACP54272.1| Deoxyribonuclease V [Sulfolobus islandicus M.16.27]
Length = 198
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 11/112 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+K I GVD+++ K + + G V +D+ + Y+ Y + + PY+PGFL REAP++
Sbjct: 31 VKKICGVDIAY-KGNLGFSVG--VSMDINSGDYNYKSY-VGEVNFPYIPGFLFMREAPLM 86
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+ ++ + +L+VDG+G+ HPR G+A+ IGVL + TIGV K+
Sbjct: 87 IKAIEGLD-------CHLLLVDGHGIAHPRKSGIAAVIGVLLDFPTIGVAKS 131
>gi|229583275|ref|YP_002841674.1| deoxyribonuclease V [Sulfolobus islandicus Y.N.15.51]
gi|259511738|sp|C3NMU5.1|NFI_SULIN RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|228013991|gb|ACP49752.1| Deoxyribonuclease V [Sulfolobus islandicus Y.N.15.51]
Length = 198
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 11/112 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+K I GVD+++ K + + G V +D+ + Y+ Y + + PY+PGFL REAP++
Sbjct: 31 VKKICGVDIAY-KGNLGFSVG--VSMDINSGDYNYKSY-VGEVNFPYIPGFLFMREAPLM 86
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+ ++ + +L+VDG+G+ HPR G+A+ IGVL + TIGV K+
Sbjct: 87 IKAIEGLD-------CHLLLVDGHGIAHPRKSGIATVIGVLLDFPTIGVAKS 131
>gi|15899199|ref|NP_343804.1| endonuclease V [Sulfolobus solfataricus P2]
gi|227829293|ref|YP_002831072.1| Deoxyribonuclease V [Sulfolobus islandicus L.S.2.15]
gi|229578063|ref|YP_002836461.1| Deoxyribonuclease V [Sulfolobus islandicus Y.G.57.14]
gi|238618738|ref|YP_002913563.1| Deoxyribonuclease V [Sulfolobus islandicus M.16.4]
gi|284996650|ref|YP_003418417.1| Endonuclease V [Sulfolobus islandicus L.D.8.5]
gi|56404423|sp|Q97VZ6.1|NFI_SULSO RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|259511735|sp|C4KKT0.1|NFI_SULIK RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|259511736|sp|C3MKC9.1|NFI_SULIL RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|259511739|sp|C3N977.1|NFI_SULIY RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|13815757|gb|AAK42594.1| Endonuclease V (nfi) [Sulfolobus solfataricus P2]
gi|227455740|gb|ACP34427.1| Deoxyribonuclease V [Sulfolobus islandicus L.S.2.15]
gi|228008777|gb|ACP44539.1| Deoxyribonuclease V [Sulfolobus islandicus Y.G.57.14]
gi|238379807|gb|ACR40895.1| Deoxyribonuclease V [Sulfolobus islandicus M.16.4]
gi|284444545|gb|ADB86047.1| Endonuclease V [Sulfolobus islandicus L.D.8.5]
Length = 198
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 11/112 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+K I GVD+++ K + + G V +D+ + Y+ Y + + PY+PGFL REAP++
Sbjct: 31 VKKICGVDIAY-KGNLGFSVG--VSMDINSGDYNYKSY-VGEVNFPYIPGFLFMREAPLM 86
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+ ++ + +L+VDG+G+ HPR G+A+ IGVL + TIGV K+
Sbjct: 87 IKAIEGLD-------CHLLLVDGHGIAHPRKSGIAAVIGVLLDFPTIGVAKS 131
>gi|227826652|ref|YP_002828431.1| deoxyribonuclease V [Sulfolobus islandicus M.14.25]
gi|385772269|ref|YP_005644835.1| Deoxyribonuclease V [Sulfolobus islandicus HVE10/4]
gi|385774983|ref|YP_005647551.1| Deoxyribonuclease V [Sulfolobus islandicus REY15A]
gi|259511737|sp|C3MU99.1|NFI_SULIM RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|227458447|gb|ACP37133.1| Deoxyribonuclease V [Sulfolobus islandicus M.14.25]
gi|323473731|gb|ADX84337.1| Deoxyribonuclease V [Sulfolobus islandicus REY15A]
gi|323476383|gb|ADX81621.1| Deoxyribonuclease V [Sulfolobus islandicus HVE10/4]
Length = 198
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 11/112 (9%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+K I GVD+++ K + + G V +D+ + Y+ Y + + PY+PGFL REAP++
Sbjct: 31 VKKICGVDIAY-KGNLGFSVG--VSMDINSGDYNYKSY-VGEVNFPYIPGFLFMREAPLM 86
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKN 205
+ ++ + +L+VDG+G+ HPR G+A+ IGVL + TIGV K+
Sbjct: 87 IKAIEGLD-------CHLLLVDGHGIAHPRKSGIAAVIGVLLDFPTIGVAKS 131
>gi|448488471|ref|ZP_21607307.1| endonuclease V [Halorubrum californiensis DSM 19288]
gi|445696161|gb|ELZ48254.1| endonuclease V [Halorubrum californiensis DSM 19288]
Length = 287
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 107/224 (47%), Gaps = 24/224 (10%)
Query: 78 NSTTTNTSTKEEEEVLLKYIGGVDMSF--SKEDPSIACGCIVVLDLQTLQIVYEDYSLLR 135
N T T +E +G VD +F ++D + L+ ++ +
Sbjct: 65 NETLPGTGGAGDESEAPTVVG-VDQAFLTDRDDGRPDAAVSAAVALRGGSVIEYASATTP 123
Query: 136 LQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLA 195
L +PY+PG LAFRE +L+ LD + +L+ DG+G +H R GLA+H+GVL
Sbjct: 124 LSIPYIPGLLAFREGDPILAALDALDADP-----DLLVCDGSGRIHYREAGLATHVGVLR 178
Query: 196 NLTTIGVGKNL--HHVDGLTH---SGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRST- 249
++ ++GV K L D T G R + A +D + G+ G A +S
Sbjct: 179 DVPSVGVAKRLLCGEPDESTDERPEGWRTPICA-----DDAV-TTAEPGTVIGHAFQSRQ 232
Query: 250 -PD--TLKPIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
P+ + P+++S GH +S +TAV +V C Y++PE R AD
Sbjct: 233 YPNRKRVNPLYVSPGHRVSAETAVDLVAALCAGYKLPETTRLAD 276
>gi|213420341|ref|ZP_03353407.1| endonuclease V [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 116
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 6/93 (6%)
Query: 96 YIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLS 155
+IGG D+ F ++ + +V+L +L++V + + +PY+PGFL+FRE P LL+
Sbjct: 30 FIGGADVGF-EQGGEVTRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLA 88
Query: 156 LLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLA 188
+ + ++ P +L VDG+G+ HPR G+A
Sbjct: 89 AWEQLSQK-----PDLLFVDGHGISHPRRLGVA 116
>gi|48478501|ref|YP_024207.1| O6-methylguanine-DNA methyltransferase/endonuclease V [Picrophilus
torridus DSM 9790]
gi|56404372|sp|Q6KZ38.1|NFI_PICTO RecName: Full=Bifunctional methyltransferase/endonuclease;
Includes: RecName: Full=Probable
methylated-DNA--protein-cysteine methyltransferase;
AltName: Full=O-6-methylbase-DNA-alkyltransferase;
Includes: RecName: Full=Endonuclease V; AltName:
Full=Deoxyinosine 3'endonuclease; AltName:
Full=Deoxyribonuclease V; Short=DNase V
gi|48431149|gb|AAT44014.1| O6-methylguanine-DNA methyltransferase/endonuclease V [Picrophilus
torridus DSM 9790]
Length = 298
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 14/110 (12%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
I +D+S+ E G V++ + + ++ + + + PY+PG+LA+RE P + L
Sbjct: 133 ICAIDVSYKDE-----IGYSVMVSFENNEYDFKTF-IKETRFPYIPGYLAYREFPYIKEL 186
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL 206
N + +++D NGLLHPR GLA+++GV+ N +IGV K+L
Sbjct: 187 GKN--------FDGTMIIDANGLLHPRRCGLATYVGVIMNKPSIGVAKSL 228
>gi|332797774|ref|YP_004459274.1| deoxyribonuclease V [Acidianus hospitalis W1]
gi|332695509|gb|AEE94976.1| Deoxyribonuclease V [Acidianus hospitalis W1]
Length = 208
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 72/124 (58%), Gaps = 13/124 (10%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+K + VD+++ +E+ G V + + +I Y+ + ++ PY+PGFL REAP++
Sbjct: 33 VKTLCAVDVAYDREE-----GYAVAVKQEGDKIEYK-ITKGKVTFPYIPGFLFMREAPIM 86
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ ++ + +L+VDG+GL HPR G+A+ IGVL ++ T+G+ K+ D +
Sbjct: 87 IKAIEG-------YQCDLLLVDGHGLAHPRKSGIATVIGVLLDIPTMGIAKSKLAGDIVE 139
Query: 214 HSGV 217
+G+
Sbjct: 140 ENGI 143
>gi|423683032|ref|ZP_17657871.1| hypothetical protein MUY_02885 [Bacillus licheniformis WX-02]
gi|383439806|gb|EID47581.1| hypothetical protein MUY_02885 [Bacillus licheniformis WX-02]
Length = 147
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 23/138 (16%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q N + IQ +LKK + NL N + + L+ GVD+++ ++D
Sbjct: 13 QENDFLTIQTKLKKHI--------NLENPISKDA---------LQTCAGVDLAYWEKDGE 55
Query: 111 IACGC-IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
C I+VLD T +++ + + ++ VPY+ GFLAFRE P+++ + P
Sbjct: 56 AFGVCSIIVLDFHTKRVIEKVHCAGKIAVPYIAGFLAFRELPLIIKAAKKLT-----IEP 110
Query: 170 QVLMVDGNGLLHPRGFGL 187
V + DGNG LH GL
Sbjct: 111 DVFLFDGNGYLHINHIGL 128
>gi|319644985|ref|ZP_07999218.1| YwqL protein [Bacillus sp. BT1B_CT2]
gi|317392794|gb|EFV73588.1| YwqL protein [Bacillus sp. BT1B_CT2]
Length = 147
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 23/138 (16%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
Q N + IQ +LKK + NL N + + L+ GVD+++ ++D
Sbjct: 13 QENDFLTIQTKLKKHI--------NLENPISKDA---------LQTCAGVDLAYWEKDGE 55
Query: 111 IACGC-IVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYP 169
C I+VLD T +++ + + ++ VPY+ GFLAFRE P+++ + P
Sbjct: 56 AFGVCSIIVLDFHTKRVIEKVHCAGKIAVPYIAGFLAFRELPLIIKAAKKLT-----IEP 110
Query: 170 QVLMVDGNGLLHPRGFGL 187
V + DGNG LH GL
Sbjct: 111 DVFLFDGNGYLHINHIGL 128
>gi|342184342|emb|CCC93823.1| putative endonuclease V [Trypanosoma congolense IL3000]
Length = 234
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
Query: 94 LKYIGGVDMSFSK-EDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPV 152
L+Y+GGVD+SF + D ++AC + V+ +L++ + PY+ +LAFRE
Sbjct: 95 LRYVGGVDISFVRGADAAVAC--LAVMTYPSLEVCRTFVQRCEVSEPYIASYLAFREVGP 152
Query: 153 LLSLLDNMKKR--ANHFYPQVLMVDGNGLLHP 182
LL L++ +++ A +PQ+L+VDG G+ HP
Sbjct: 153 LLELVEGVREELCAASCFPQLLLVDGCGVPHP 184
>gi|365959993|ref|YP_004941560.1| endonuclease V [Flavobacterium columnare ATCC 49512]
gi|365736674|gb|AEW85767.1| endonuclease V [Flavobacterium columnare ATCC 49512]
Length = 427
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++IGGV +++ + + I V+++ + +IV + ++P F E
Sbjct: 220 VQFIGGVTVAYH-DITQVIVAVITVMNVNSQEIVDQAIYTEDKITMHIPDVFGFNETVWA 278
Query: 154 LSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT 213
+ + + + PQ++ DG+G+ HP+ GLA+ +G+ ++ TIG K +
Sbjct: 279 IKAFEKLTIK-----PQLIFCDGHGIEHPKNMGLATFLGIQLDIPTIGCAKKRL----VG 329
Query: 214 HSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MI 272
+ L D + + E I G A+R+ +T PI++S+GH ISL+T+V +
Sbjct: 330 YYKKEDLGDKRADRIELIF-----DQKVVGKALRTKENT-NPIYVSIGHKISLETSVNWV 383
Query: 273 VKMTCKYRVPEPIRQA 288
++ T R+P + +A
Sbjct: 384 LETTQSTRLPFVLEKA 399
>gi|13541612|ref|NP_111300.1| bifunctional methylated DNA-protein cysteine
methyltransferase/deoxyinosine 3'endonuclease
[Thermoplasma volcanium GSS1]
gi|56404421|sp|Q97AL5.1|NFI_THEVO RecName: Full=Bifunctional methyltransferase/endonuclease;
Includes: RecName: Full=Probable
methylated-DNA--protein-cysteine methyltransferase;
AltName: Full=O-6-methylbase-DNA-alkyltransferase;
Includes: RecName: Full=Endonuclease V; AltName:
Full=Deoxyinosine 3'endonuclease; AltName:
Full=Deoxyribonuclease V; Short=DNase V
gi|14325011|dbj|BAB59937.1| hypothetical protein [Thermoplasma volcanium GSS1]
Length = 321
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 43/68 (63%), Gaps = 9/68 (13%)
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PY+PG+LAF+E + +L DN ++++DGNG+LHPR GLA+H GV
Sbjct: 177 PYIPGYLAFKEFKFIRALYDN---------ETMILIDGNGILHPRFAGLATHAGVSLKTA 227
Query: 199 TIGVGKNL 206
+IG+ K+L
Sbjct: 228 SIGIAKHL 235
>gi|257076836|ref|ZP_05571197.1| O6-methylguanine-DNA methyltransferase/endonuclease V [Ferroplasma
acidarmanus fer1]
Length = 303
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 32/153 (20%)
Query: 134 LRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGV 193
+++ PY+PG+L +RE+P + L N+ +L++D NGLLHPR GLA+ GV
Sbjct: 167 MKVNFPYIPGYLGYRESPFIEKLSVNVD--------ALLLIDANGLLHPRKCGLATFAGV 218
Query: 194 LANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTL 253
+ TIGV K+L + + +G NNE + G A+
Sbjct: 219 VLGRATIGVAKSL-LMGKIDDTGYVVY------NNEKL-----------GYAIN------ 254
Query: 254 KPIFISVGHCISLDTAVMIVKMTCKYRVPEPIR 286
K +S G+ ISL++++ +K+ K + P ++
Sbjct: 255 KHTIVSPGNMISLESSIKKIKLLGKNKYPAILK 287
>gi|119610013|gb|EAW89607.1| hypothetical protein FLJ35220, isoform CRA_f [Homo sapiens]
gi|119610014|gb|EAW89608.1| hypothetical protein FLJ35220, isoform CRA_f [Homo sapiens]
gi|119610019|gb|EAW89613.1| hypothetical protein FLJ35220, isoform CRA_f [Homo sapiens]
Length = 88
Score = 62.8 bits (151), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 43/55 (78%)
Query: 244 VAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
+A+RS + +P++ISVGH +SL+ AV + C++R+PEP+RQADI SR++++K
Sbjct: 1 MALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRFRIPEPVRQADICSREHIRK 55
>gi|70606363|ref|YP_255233.1| endonuclease V [Sulfolobus acidocaldarius DSM 639]
gi|449066576|ref|YP_007433658.1| endonuclease V [Sulfolobus acidocaldarius N8]
gi|449068850|ref|YP_007435931.1| endonuclease V [Sulfolobus acidocaldarius Ron12/I]
gi|76363263|sp|Q4JB89.1|NFI_SULAC RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|68567011|gb|AAY79940.1| endonuclease V [Sulfolobus acidocaldarius DSM 639]
gi|449035084|gb|AGE70510.1| endonuclease V [Sulfolobus acidocaldarius N8]
gi|449037358|gb|AGE72783.1| endonuclease V [Sulfolobus acidocaldarius Ron12/I]
Length = 196
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 16/140 (11%)
Query: 69 EDF---FTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQ 125
EDF F L + N + K +K + GVD+++ +I V+ D +
Sbjct: 2 EDFMIEFLSKLQIFISKNITIKRLGIENIKNLCGVDIAYK---GNIGYAVSVMFDGKDY- 57
Query: 126 IVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGF 185
+ Y ++ PY+PG+L REAP+++ K F +++VDG+G+ HPR
Sbjct: 58 --FHKYVKGKVDFPYIPGYLFMREAPLMI-------KAVESFQCDLILVDGHGMAHPRKS 108
Query: 186 GLASHIGVLANLTTIGVGKN 205
G+AS IGV+ + TIGV K+
Sbjct: 109 GIASVIGVILDKPTIGVAKS 128
>gi|242398960|ref|YP_002994384.1| Endonuclease V [Thermococcus sibiricus MM 739]
gi|242265353|gb|ACS90035.1| Endonuclease V [Thermococcus sibiricus MM 739]
Length = 187
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 99/244 (40%), Gaps = 66/244 (27%)
Query: 51 QLNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPS 110
L + E+Q +L KR++ K ++ +K I VD+S+
Sbjct: 2 NLKKIAEVQRKLSKRIVE------------------KPQDISKIKTIAAVDVSYKGNK-- 41
Query: 111 IACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREA-PVLLSLLDNMKKRANHFYP 169
A V+ + +++ + Y+P + RE P+LL L + F
Sbjct: 42 -AKAAFVLCSFPSCEVLKTKTIETEVAFSYIPTYFFLRETRPILLLL------KGEQF-- 92
Query: 170 QVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLTHSGVRQLLDAKENNNE 229
+L+V+G+G HPRG+GLASHIG+L TIG+ K
Sbjct: 93 DLLIVEGHGKAHPRGYGLASHIGLLIGKPTIGIAKR------------------------ 128
Query: 230 DIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQAD 289
PL G + ++SVG+ I L++A IV++ + P+P++ AD
Sbjct: 129 ---PLPNSIGECVKIGKA---------YVSVGNLIDLNSAKEIVRIINEGDYPKPLKIAD 176
Query: 290 IRSR 293
S+
Sbjct: 177 KFSK 180
>gi|429117845|ref|ZP_19178763.1| Endonuclease V [Cronobacter sakazakii 701]
gi|426320974|emb|CCK04876.1| Endonuclease V [Cronobacter sakazakii 701]
Length = 125
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 97 IGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSL 156
IGG D+ F ++ + +V+L +L+++ + + +PY+PGFL+FRE P LL+
Sbjct: 31 IGGADVGF-EQGGEVTRAAMVLLKYPSLELLEYQVARIPTTMPYIPGFLSFREYPALLTA 89
Query: 157 LDNMKKRANHFYPQVLMVDGNGLLHPRGFGLAS 189
+ + ++ P +L VDG+G+ HPR G S
Sbjct: 90 WEMLSRK-----PDLLFVDGHGISHPRRLGATS 117
>gi|374633330|ref|ZP_09705695.1| deoxyinosine 3'endonuclease (endonuclease V) [Metallosphaera
yellowstonensis MK1]
gi|373523118|gb|EHP68038.1| deoxyinosine 3'endonuclease (endonuclease V) [Metallosphaera
yellowstonensis MK1]
Length = 198
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 47/71 (66%), Gaps = 7/71 (9%)
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
++ PY+PG+L REAP+++ L+ ++ +L+VDG+GL HPR G+A+ +GVL
Sbjct: 65 KVGFPYIPGYLFMREAPIIMKALEGVRF-------DLLLVDGHGLAHPRRSGIATVMGVL 117
Query: 195 ANLTTIGVGKN 205
+ TIG+ K+
Sbjct: 118 LKVPTIGIAKS 128
>gi|315426103|dbj|BAJ47749.1| deoxyribonuclease V [Candidatus Caldiarchaeum subterraneum]
gi|343484934|dbj|BAJ50588.1| deoxyribonuclease V [Candidatus Caldiarchaeum subterraneum]
Length = 207
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PY+PGFL RE P +L L K + VL+ DG+G HPR GLA+ +G +
Sbjct: 75 PYIPGFLVLREGPAMLRALQRTKTDYD-----VLVADGHGRAHPRRCGLATLLGFAVDKP 129
Query: 199 TIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
+IGV K++ G RQ N+++ I+ GVA T
Sbjct: 130 SIGVAKSI-------LIGTRQ----PSNSHDKIVE----GDEVIGVAKGKT-------VY 167
Query: 259 SVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
S G+ +S + + + + PEP+R AD SR+ ++K
Sbjct: 168 SQGYGVSFNDLLKVFDLFGG-AYPEPLRVADRLSREAVKK 206
>gi|315424922|dbj|BAJ46598.1| endonuclease V [Candidatus Caldiarchaeum subterraneum]
Length = 190
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 28/160 (17%)
Query: 139 PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLT 198
PY+PGFL RE P +L L K + VL+ DG+G HPR GLA+ +G +
Sbjct: 58 PYIPGFLVLREGPAMLRALQRTKTDYD-----VLVADGHGRAHPRRCGLATLLGFAVDKP 112
Query: 199 TIGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFI 258
+IGV K++ G RQ N+++ I+ GVA T
Sbjct: 113 SIGVAKSI-------LIGTRQ----PSNSHDKIVE----GDEVIGVAKGKT-------VY 150
Query: 259 SVGHCISLDTAVMIVKMTCKYRVPEPIRQADIRSRDYLQK 298
S G+ +S + + + + PEP+R AD SR+ ++K
Sbjct: 151 SQGYGVSFNDLLKVFDLFGGA-YPEPLRVADRLSREAVKK 189
>gi|345864638|ref|ZP_08816836.1| endonuclease V [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345124171|gb|EGW54053.1| endonuclease V [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 113
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 19/122 (15%)
Query: 171 VLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNL---HHVDGLTHSGVRQLLDAKENN 227
+L+ DG GL HPR FGLA H+G++ + +IGV K+ H + G L+ K
Sbjct: 1 MLLCDGQGLAHPRRFGLACHLGLITDTPSIGVAKSRLIGTHAELPAEKGAWVTLEDK--- 57
Query: 228 NEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAV-MIVKMTCKYRVPEPIR 286
G G +RS + + P++IS+G ISL +A+ + T +Y++PE R
Sbjct: 58 -----------GEIIGAVLRSRSN-VNPLYISIGQRISLASAIHYTLACTTRYKLPETTR 105
Query: 287 QA 288
A
Sbjct: 106 WA 107
>gi|384916687|ref|ZP_10016841.1| Deoxyinosine 3'endonuclease/endonuclease V [Methylacidiphilum
fumariolicum SolV]
gi|384525929|emb|CCG92714.1| Deoxyinosine 3'endonuclease/endonuclease V [Methylacidiphilum
fumariolicum SolV]
Length = 230
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 140 YVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTT 199
Y+PG LA R+ P+L + + R P++L V+ HP GLA H+G ++ T
Sbjct: 82 YIPGLLALRDGPLLEKAVVGLNLR-----PELLFVNATSRDHPHRAGLALHLGYKLDIPT 136
Query: 200 IGVGKNLHHVDGLTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFIS 259
+G+ + G L K + + + + + W +R T + P+ +
Sbjct: 137 VGITRKPLIAKG--------ALPGKNRGDRSELRIGNETVAFW---LR-TQENKAPLVVH 184
Query: 260 VGHCISLDTAVMIV-KMTCKYRVPEPIRQADIRSR 293
G+ + +TA+ IV + T KYR PEP+R A +R
Sbjct: 185 PGYRLDWETAIEIVLRYTLKYRTPEPLRLARKAAR 219
>gi|15920798|ref|NP_376467.1| hypothetical protein ST0581 [Sulfolobus tokodaii str. 7]
gi|56404420|sp|Q974T1.1|NFI_SULTO RecName: Full=Endonuclease V; AltName: Full=Deoxyinosine
3'endonuclease; AltName: Full=Deoxyribonuclease V;
Short=DNase V
gi|342306249|dbj|BAK54338.1| endonuclease V [Sulfolobus tokodaii str. 7]
Length = 196
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 9/78 (11%)
Query: 130 DYSLLRLQV--PYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGL 187
+Y+L++ V PY+P FL REAP+++ K + +++VDG+GL HPR G+
Sbjct: 58 EYNLVKGDVFFPYIPTFLFVREAPLMI-------KAVEKYECDLILVDGHGLTHPRKSGI 110
Query: 188 ASHIGVLANLTTIGVGKN 205
A+ IGVL + TIGV K+
Sbjct: 111 ATVIGVLLDKPTIGVAKS 128
>gi|119610008|gb|EAW89602.1| hypothetical protein FLJ35220, isoform CRA_a [Homo sapiens]
Length = 169
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 56/146 (38%), Gaps = 56/146 (38%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK ++ D W ++ L+ +GGVD+SF K D
Sbjct: 14 LSLWKREQARLKAHVVDRDTEAWQ-----------RDPAFSGLQRVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
AC +VVL L+ V
Sbjct: 63 ACASLVVLSFPELE---------------------------------------------V 77
Query: 172 LMVDGNGLLHPRGFGLASHIGVLANL 197
L+VDGNG+LH RGFG+A H+GVL +L
Sbjct: 78 LLVDGNGVLHHRGFGVACHLGVLTDL 103
>gi|56404387|sp|Q74NK2.1|NFI_NANEQ RecName: Full=Bifunctional methyltransferase-like/endonuclease;
Includes: RecName: Full=Probable
methylated-DNA--protein-cysteine methyltransferase-like;
Includes: RecName: Full=Endonuclease V; AltName:
Full=Deoxyinosine 3'endonuclease; AltName:
Full=Deoxyribonuclease V; Short=DNase V
gi|40068859|gb|AAR39194.1| NEQ345a [Nanoarchaeum equitans Kin4-M]
Length = 299
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 136 LQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLA 195
++ PY+P +L+FRE ++++L ++ Y + +++G+GL HPR GLA+ +G +
Sbjct: 164 IEFPYIPTYLSFREGIPIVNILKDLD------YTALYIINGHGLSHPRKMGLATFVGTVL 217
Query: 196 NLTTIGVGKNL 206
+L TIG K L
Sbjct: 218 DLPTIGDAKKL 228
>gi|422293144|gb|EKU20444.1| endonuclease-like protein, partial [Nannochloropsis gaditana
CCMP526]
Length = 92
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 94 LKYIGGVDMSF----SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFRE 149
L +GG+D+SF + A C VVL +L++++E Y L +PYV GFLA+RE
Sbjct: 15 LTRVGGLDLSFFPSSHGHEREEAVACFVVLSYPSLEVLHESYLPTTLTIPYVAGFLAYRE 74
Query: 150 APVLLSLLDNMKK 162
P + L++ +++
Sbjct: 75 GPPMAQLVEELRR 87
>gi|440802832|gb|ELR23758.1| endonuclease V protein, putative, partial [Acanthamoeba castellanii
str. Neff]
Length = 163
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 89 EEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPG 143
+E+ L +GGVD+SF ++D A +VV L++VYE Y ++ L PY+PG
Sbjct: 109 KEKQPLTLVGGVDLSFFRDDKRTAIAALVVCSFPQLEVVYEIYKVVELTAPYIPG 163
>gi|119610020|gb|EAW89614.1| hypothetical protein FLJ35220, isoform CRA_k [Homo sapiens]
Length = 83
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 244 VAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQ 287
+A+RS + +P++ISVGH +SL+ AV + C++R+PEP+RQ
Sbjct: 1 MALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRFRIPEPVRQ 44
>gi|28278064|gb|AAH45824.1| FLJ35220 protein [Homo sapiens]
gi|34191520|gb|AAH37889.1| FLJ35220 protein [Homo sapiens]
Length = 65
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 33/44 (75%)
Query: 244 VAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQ 287
+A+RS + +P++ISVGH +SL+ AV + C++R+PEP+RQ
Sbjct: 1 MALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRFRIPEPVRQ 44
>gi|119610009|gb|EAW89603.1| hypothetical protein FLJ35220, isoform CRA_b [Homo sapiens]
Length = 175
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 244 VAMRSTPDTLKPIFISVGHCISLDTAVMIVKMTCKYRVPEPIRQADI 290
+A+RS + +P++ISVGH +SL+ AV + C++R+PEP+RQ +
Sbjct: 1 MALRSHDRSTRPLYISVGHRMSLEAAVRLTCCCCRFRIPEPVRQVHL 47
>gi|189219613|ref|YP_001940254.1| deoxyinosine 3'endonuclease/endonuclease V [Methylacidiphilum
infernorum V4]
gi|189186471|gb|ACD83656.1| Deoxyinosine 3'endonuclease/endonuclease V [Methylacidiphilum
infernorum V4]
Length = 230
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 22/203 (10%)
Query: 92 VLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
V + Y G + + D A ++ D +T E R YVPG LA RE P
Sbjct: 38 VFICYERGKREAGKRGDRGWAASVLIFPDGKTQSFCVEG----RTPFDYVPGCLALREGP 93
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
+L L + P +L V+ HP GLA H+G ++ +IG+ + +G
Sbjct: 94 LLEEALLGLGS-----LPDLLFVNATARDHPYRAGLALHLGFKLDIPSIGITRKPLLAEG 148
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
R N+ + G +R T D P+ + G+ I + A
Sbjct: 149 TLPGNKRGETSELRIGNQAV-----------GFWLR-TQDNKAPLVVHPGYRIDFEKAKE 196
Query: 272 IVKM-TCKYRVPEPIRQADIRSR 293
I T KYR P+P+R A SR
Sbjct: 197 IALFYTEKYRTPQPLRLARQLSR 219
>gi|189219620|ref|YP_001940261.1| deoxyinosine 3'endonuclease/endonuclease V [Methylacidiphilum
infernorum V4]
gi|189186478|gb|ACD83663.1| Deoxyinosine 3'endonuclease/endonuclease V [Methylacidiphilum
infernorum V4]
Length = 232
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 22/203 (10%)
Query: 92 VLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
V + Y G + + D A ++ D +T E R YVPG LA RE P
Sbjct: 40 VFICYERGKREAGKRGDRGWAAFVLIFPDGKTQSFCVEG----RTPFDYVPGCLALREGP 95
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDG 211
+L L + P +L V+ HP GLA H+G ++ +IG+ + +G
Sbjct: 96 LLEEALLGLGS-----LPDLLFVNATARDHPYRAGLALHLGFKLDIPSIGITRKPLLAEG 150
Query: 212 LTHSGVRQLLDAKENNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVM 271
R N+ + G +R T D P+ + G+ I + A
Sbjct: 151 TLPGNKRGETSELRIGNQAV-----------GFWLR-TQDNKAPLVVHPGYRIDFEKAKE 198
Query: 272 IVKM-TCKYRVPEPIRQADIRSR 293
I T +YR P+P+R A SR
Sbjct: 199 IALFYTERYRTPQPLRLARQLSR 221
>gi|155212682|gb|ABT17403.1| endonuclease V [Halorubrum sp. TP009]
Length = 344
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 77/163 (47%), Gaps = 31/163 (19%)
Query: 43 SPDPAAQAQLNQWTEIQDEL-------KKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLK 95
PDPAA A + + T + D L ++RL T D + +T+ + ++
Sbjct: 37 GPDPAAVA-VEEATSLADGLPPARDGAQERLGTGD--------EGSADTTPDPDGPTVV- 86
Query: 96 YIGGVDMSF----SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAP 151
GVD +F + P A V T +V ++ L +PYVPG LAFRE
Sbjct: 87 ---GVDQAFLTDRDGDRPDAAVSAAVAFRDGT--VVEYAHATTPLSIPYVPGLLAFREGE 141
Query: 152 VLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
+L+ LD + + +L+ DG+G +H R GLA+H+GVL
Sbjct: 142 PILAALDALDAAPD-----LLVCDGSGRIHFREAGLATHVGVL 179
>gi|379736178|ref|YP_005329684.1| Endonuclease V [Blastococcus saxobsidens DD2]
gi|378783985|emb|CCG03653.1| Endonuclease V [Blastococcus saxobsidens DD2]
Length = 224
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 136 LQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVLA 195
++ PYVP L+ RE P+L++ L+ + R P VL++ G HPR GLA H+G +
Sbjct: 77 VRAPYVPTQLSAREGPLLVAALEALGGR-----PDVLLLAAAGRDHPRHAGLALHVGAVL 131
Query: 196 NLTTIGV 202
+ + GV
Sbjct: 132 GVPSAGV 138
>gi|330863072|emb|CBX73203.1| hypothetical protein YEW_AB00260 [Yersinia enterocolitica W22703]
Length = 103
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 94 LKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVL 153
+++I G D+ F ++ + I VL +L++V + + +PY+PG L+FRE P L
Sbjct: 29 VRFIAGADVGFEQQG-EVTRAAIAVLRYPSLELVEYQVARVATSLPYIPGLLSFREYPAL 87
Query: 154 LSLLDNMKKR 163
L+ + +++R
Sbjct: 88 LAAWEQIQQR 97
>gi|395749558|ref|XP_002827969.2| PREDICTED: endonuclease V-like [Pongo abelii]
Length = 104
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 52 LNQWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSI 111
L+ W Q LK R++ D W + + L+ +GGVD+SF K D
Sbjct: 14 LSLWKREQARLKARVVNWDTEAWQRDPAFSG-----------LQRVGGVDVSFVKGDSVR 62
Query: 112 ACGCIVVLDLQTLQIVYEDYSL 133
AC +VVL L++ +ED L
Sbjct: 63 ACASLVVLSFPELEVTWEDAEL 84
>gi|167950822|ref|ZP_02537896.1| endonuclease V [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 132
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 87 KEEEEVLLKYIGGVDMSFSKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLA 146
+E+ +++ GVD+ F ++ + + +L +L+++ + L + PY+PG L+
Sbjct: 3 REDRFTTPRFVAGVDVGF-EDGGATTRAAVALLRFPSLELLEHSIAHLPTRFPYLPGLLS 61
Query: 147 FREAPVLLSLLDNMKKRANHFYPQVLMVDGN 177
FRE P +L L ++ P +L+ DG
Sbjct: 62 FREIPAILEALKGLET-----APDMLLCDGQ 87
>gi|153005743|ref|YP_001380068.1| endonuclease V [Anaeromyxobacter sp. Fw109-5]
gi|152029316|gb|ABS27084.1| Endonuclease V [Anaeromyxobacter sp. Fw109-5]
Length = 231
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 36/199 (18%)
Query: 105 SKEDPSIACGCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRA 164
++E+ A +V L L + ++ L+ + G LA RE P+L + + +
Sbjct: 54 AEEELGFAAAALVELGRDGLAALAYSAAVGALRAGFESGLLALREGPLLAEAVVALPE-- 111
Query: 165 NHFYPQVLMVDGNGLLHPRGFGLASHIGVLANLTTIGVGKNLHHVDGLT---HSGVRQLL 221
P +L+V G HPR GLA +G L ++GV + G G R L
Sbjct: 112 ---APGLLLVHAAGRDHPRACGLAVKLGAALGLPSVGVTRRPLVAGGPLPEDRVGARAPL 168
Query: 222 --DAKE-----NNNEDIIPLMGGSGSTWGVAMRSTPDTLKPIFISVGHCISLDTAVMIVK 274
D +E + P++ +G W R+TP+ A +++
Sbjct: 169 TRDGEEVACRVRTRAGVHPIVAHAG--W----RTTPEI---------------AAEVVLA 207
Query: 275 MTCKYRVPEPIRQADIRSR 293
T R PEP+R+A R+R
Sbjct: 208 ATRGTRFPEPLRRAVQRAR 226
>gi|432119086|gb|ELK38306.1| Endonuclease V [Myotis davidii]
Length = 187
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 124 LQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQV 171
+ ++YED L+ L PY+ GFLAFRE P L+ + ++++ PQ
Sbjct: 37 VNVLYEDSRLVHLTAPYLSGFLAFREVPFLVDAVQRLQEKEPSLMPQA 84
>gi|440794253|gb|ELR15420.1| hypothetical protein ACA1_276350 [Acanthamoeba castellanii str.
Neff]
Length = 77
Score = 43.5 bits (101), Expect = 0.11, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 13/74 (17%)
Query: 39 EALASPDPAAQAQLNQWTEIQDELKKRLITEDFFTWNLPNSTTT---------NTSTKEE 89
EA+ DP+A + E ELK +L+T D F WNLP+ T+ T+E+
Sbjct: 2 EAVELEDPSAH--IKALWESHLELKTQLVTRDDFAWNLPSLPTSAPPPDDAAARGGTEEK 59
Query: 90 EEVLLKYIGGVDMS 103
EE L++IGGVD+S
Sbjct: 60 EE--LRFIGGVDIS 71
>gi|410721274|ref|ZP_11360615.1| Endonuclease V [Methanobacterium sp. Maddingley MBC34]
gi|410599352|gb|EKQ53906.1| Endonuclease V [Methanobacterium sp. Maddingley MBC34]
Length = 96
Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 21/108 (19%)
Query: 54 QWTEIQDELKKRLITEDFFTWNLPNSTTTNTSTKEEEEVLLKYIGGVDMSFSKEDPSIAC 113
Q IQ L R++ ED F+ L+ + G D+SFS ++ + A
Sbjct: 9 QLANIQYFLADRVLDEDCFS-------------------KLERVAGADVSFSVDNKAAAA 49
Query: 114 GCIVVLDLQTLQIVYEDYSLLRLQVPYVPGFLAFREAPVLLSLLDNMK 161
+VVL L+ L+I+ + + L Y+PGFL RE ++S+L+ +
Sbjct: 50 --VVVLQLEDLKILEKRTLPVELFFLYIPGFLGMRETDPVISVLEYFR 95
>gi|56789194|gb|AAH88247.1| LOC498029 protein [Rattus norvegicus]
Length = 41
Score = 41.6 bits (96), Expect = 0.40, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 133 LLRLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVL 172
++ L+ PYV GFLAFRE P L+ L+ ++++ PQ L
Sbjct: 1 MVGLKAPYVSGFLAFREVPFLVELVQRLQEKEPDLMPQAL 40
>gi|429117846|ref|ZP_19178764.1| Endonuclease V [Cronobacter sakazakii 701]
gi|426320975|emb|CCK04877.1| Endonuclease V [Cronobacter sakazakii 701]
Length = 103
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 255 PIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
P+F+S GH +S+DTA+ V+ K YR+PEP R AD
Sbjct: 51 PLFVSTGHRVSIDTALGWVQRCTKGYRLPEPTRWAD 86
>gi|319644986|ref|ZP_07999219.1| hypothetical protein HMPREF1012_00252 [Bacillus sp. BT1B_CT2]
gi|423683031|ref|ZP_17657870.1| hypothetical protein MUY_02884 [Bacillus licheniformis WX-02]
gi|317392795|gb|EFV73589.1| hypothetical protein HMPREF1012_00252 [Bacillus sp. BT1B_CT2]
gi|383439805|gb|EID47580.1| hypothetical protein MUY_02884 [Bacillus licheniformis WX-02]
Length = 94
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 239 GSTWGVAMRSTPDTLKPIFISVGHCISLDTA--VMIVKMTCKYRVPEPIRQADIRS 292
G +G A+R+ D +KPIF+S GH I LD++ + + + + R+P P+R AD+ +
Sbjct: 25 GEVYGRAVRTRQD-VKPIFLSCGHLIDLDSSYDIAMSLINRESRLPIPVRLADLET 79
>gi|374855244|dbj|BAL58106.1| deoxyribonuclease V [uncultured prokaryote]
Length = 233
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 135 RLQVPYVPGFLAFREAPVLLSLLDNMKKRANHFYPQVLMVDGNGLLHPRGFGLASHIGVL 194
R PYVPG LA RE P+L + + RA F VL+V+ G HPR GLA H+G+L
Sbjct: 81 RSSAPYVPGLLALREGPLLEAAV-----RALRFPFDVLLVNATGRDHPRRAGLALHLGLL 135
Query: 195 ANLTTIGV 202
++ T+GV
Sbjct: 136 LDVPTVGV 143
>gi|420376141|ref|ZP_14875927.1| endonuclease V domain protein [Shigella flexneri 1235-66]
gi|391306806|gb|EIQ64556.1| endonuclease V domain protein [Shigella flexneri 1235-66]
Length = 71
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 255 PIFISVGHCISLDTAVMIVKMTCK-YRVPEPIRQAD 289
P+FI+ GH +S+D+A+ V+ K YR+PEP R AD
Sbjct: 19 PLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWAD 54
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,091,791,791
Number of Sequences: 23463169
Number of extensions: 217289193
Number of successful extensions: 510999
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 507621
Number of HSP's gapped (non-prelim): 1114
length of query: 309
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 167
effective length of database: 9,027,425,369
effective search space: 1507580036623
effective search space used: 1507580036623
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)