BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046072
(791 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 6 RQELAKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 61
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 62 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 112
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K ++ T+ V L+ ++ LK + H D P
Sbjct: 113 V----------------------KCAKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 149
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 150 SNLAVNEDCELKILDFGL-ARHTDDEMTGYV 179
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 30 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 85
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 86 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 136
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 137 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 173
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 174 SNLAVNEDCELKILDFGL-ARHTDDEMXGXV 203
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 6 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 61
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 62 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 112
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 113 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 149
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 150 SNLAVNEDCELKILDFGL-ARHTDDEMAGFV 179
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGL-ARHTDDEMAGFV 183
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGL-ARHTDDEMAGFV 183
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 29 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 84
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 85 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 135
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 136 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 172
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 173 SNLAVNEDCELKILDFGL-ARHTDDEMTGYV 202
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGL-ARHTDDEMTGYV 183
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 30 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 85
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 86 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 136
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 137 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 173
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 174 SNLAVNEDCELKILDFGL-ARHTDDEMTGYV 203
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 6 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 61
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 62 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 112
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 113 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 149
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 150 SNLAVNEDCELKILDFGL-ARHTDDEMTGYV 179
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 16 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 71
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 72 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 122
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 123 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 159
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 160 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 189
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 87/211 (41%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V SQ D + + ++ LK + H D P
Sbjct: 117 VK-----------------------SQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDSELKILDFGLC-RHTDDEMTGYV 183
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 12 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 67
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 68 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 118
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 119 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 155
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 156 SNLAVNEDSELKILDFGLA-RHTDDEMTGYV 185
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 16 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 71
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 72 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 122
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 123 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 159
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 160 SNLAVNEDSELKILDFGLA-RHTDDEMTGYV 189
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS PI + + G V + G VAVK + RPF +++
Sbjct: 15 RQELNKTIWEVPERYQNLS--PIGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 70
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 71 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 121
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 122 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 158
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 159 SNLAVNEDXELKILDFGLA-RHTDDEMTGYV 188
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 183
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 33 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 88
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 89 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 139
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 140 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 176
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 177 SNLAVNEDCELKILDFGLA-RHTDDEMXGYV 206
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y L+ P+ + + G V + G VAVK + RPF +++
Sbjct: 20 RQELNKTIWEVPERYQNLA--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 75
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 76 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 126
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 127 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 163
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 164 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 193
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 8 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 63
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 64 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 114
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 115 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 151
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 152 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 181
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 22 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 77
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 78 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 128
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 129 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 165
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 166 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 195
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 22 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 77
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 78 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 128
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 129 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 165
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 166 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 195
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 12 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 67
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 68 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 118
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 119 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 155
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 156 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 185
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 183
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 12 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 67
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 68 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 118
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 119 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 155
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 156 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 185
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 7 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 62
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 63 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 113
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 114 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 150
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 151 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 180
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 30 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 85
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 86 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 136
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 137 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 173
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 174 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 203
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 17 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 72
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 73 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 123
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 124 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 160
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 161 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 190
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 29 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 84
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 85 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 135
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 136 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 172
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 173 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 202
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 16 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 71
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 72 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 122
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 123 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 159
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 160 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 189
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 33 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 88
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 89 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 139
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 140 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 176
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 177 SNLAVNEDCELKILDFGL-ARHTDDEMTGYV 206
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 183
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 183
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 183
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 16 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 71
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 72 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 122
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 123 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 159
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 160 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 189
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 6 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 61
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 62 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 112
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 113 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 149
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 150 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 179
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 183
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 15 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 70
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 71 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 121
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 122 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 158
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 159 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 188
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 21 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 76
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 77 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 127
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 128 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 164
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 165 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 194
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 9 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 64
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 65 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 115
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 116 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 152
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 153 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 182
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 183
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 12 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 67
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 68 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 118
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 119 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 155
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 156 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 185
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGXV 183
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 15 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 70
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 71 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 121
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 122 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 158
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 159 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 188
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 7 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 62
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 63 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 113
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 114 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 150
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 151 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 180
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 21 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 76
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 77 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 127
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 128 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 164
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 165 SNLAVNEDXELKILDFGLA-RHTDDEMTGYV 194
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 183
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 15 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 70
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 71 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 121
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 122 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 158
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 159 SNLAVNEDXELKILDFGLA-RHTDDEMTGYV 188
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KXQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 183
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KXQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 154 SNLAVNEDXELKILDFGLA-RHTDDEMTGYV 183
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILD+GL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDYGLA-RHTDDEMTGYV 183
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + +PF +++
Sbjct: 22 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSKPF--QSIIHA 77
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 78 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 128
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 129 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 165
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 166 SNLAVNEDCELKILDFGLA-RHTDDEMTGYV 195
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDF L + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDFYLA-RHTDDEMTGYV 183
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 31/160 (19%)
Query: 391 LFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQ 450
L E+M+TDL QV+ + R V++ I+ ++ L
Sbjct: 111 LVTELMRTDLAQVI-------HDQRIVISPQHIQ--------------YFMYHILLGLHV 149
Query: 451 LLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKYGMIEAIAHLIHRDYEAIV- 509
L + G H D HPGN++ + + I DF L + T D + H +R E ++
Sbjct: 150 LHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQ 207
Query: 510 -KDFVKLDFIPEGVNLEPILPVLAKVFDQALEGGGAKNFN 548
K F KL V++ V+A++F++ G+ +N
Sbjct: 208 FKGFTKL------VDMWSAGCVMAEMFNRKALFRGSTFYN 241
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 31/160 (19%)
Query: 391 LFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQ 450
L E+M+TDL QV+ + R V++ I+ ++ L
Sbjct: 111 LVTELMRTDLAQVI-------HDQRIVISPQHIQ--------------YFMYHILLGLHV 149
Query: 451 LLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKYGMIEAIAHLIHRDYEAIV- 509
L + G H D HPGN++ + + I DF L + T D + H +R E ++
Sbjct: 150 LHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQ 207
Query: 510 -KDFVKLDFIPEGVNLEPILPVLAKVFDQALEGGGAKNFN 548
K F KL V++ V+A++F++ G+ +N
Sbjct: 208 FKGFTKL------VDMWSAGCVMAEMFNRKALFRGSTFYN 241
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 41/205 (20%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 17 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 72
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 73 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 123
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 124 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 160
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDD 488
NL D +L ILDFGL D+
Sbjct: 161 SNLAVNEDCELKILDFGLARHTADE 185
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 41/205 (20%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 17 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 72
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 73 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 123
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 124 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 160
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDD 488
NL D +L ILDFGL D+
Sbjct: 161 SNLAVNEDCELKILDFGLARHTADE 185
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 41/205 (20%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 17 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 72
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 73 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 123
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 124 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 160
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDD 488
NL D +L ILDFGL D+
Sbjct: 161 SNLAVNEDCELKILDFGLARHTADE 185
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 87/214 (40%), Gaps = 44/214 (20%)
Query: 296 WQEIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVDLFIIRNLG-L 353
W+ + +S + + + + G V K +G+ VA+K + RPF E +F R L
Sbjct: 20 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-----IFAKRAYREL 74
Query: 354 ALRKFPQVSIDVVGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYT 413
L K Q +V+GL+D F + + L M+TDL +++
Sbjct: 75 LLLKHMQHE-NVIGLLD-----VFTPASSLRNFYDFYLVMPFMQTDLQKIM--------- 119
Query: 414 SRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGK 473
G K S E + LV ++ LK + G H D PGNL D +
Sbjct: 120 -----------GLKFS---EEKIQYLV-YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE 164
Query: 474 LAILDFGLVTKLTDDQKYGMIEAIAHLIHRDYEA 507
L ILDFGL ++ E +++ R Y A
Sbjct: 165 LKILDFGLA-------RHADAEMTGYVVTRWYRA 191
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L IL FGL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILGFGLA-RHTDDEMTGYV 183
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 40/210 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V ++G +AVK + RPF +++
Sbjct: 39 RQELNKTIWEVPERYQTLS--PVGSGAYGSVCSSYDVKSGLKIAVKKLSRPF--QSIIHA 94
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVV 404
R L L L+ +V+GL+D F + E + L +M DL +V
Sbjct: 95 KRTYRELRL-LKHMKHE--NVIGLLD-----VFTPATSLEEFNDVYLVTHLMGADLNNIV 146
Query: 405 IPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPG 464
K + T+ V L+ ++ LK + H D P
Sbjct: 147 ----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPS 183
Query: 465 NLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILDFGL + TDD+ G +
Sbjct: 184 NLAVNEDCELKILDFGLA-RHTDDEMTGYV 212
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 133 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 170
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 137 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 174
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILD GL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDAGLA-RHTDDEMTGYV 183
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 173
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 140 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 177
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 173 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 210
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILD GL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDRGLA-RHTDDEMTGYV 183
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 134 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 171
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 172
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 128 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 165
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
++C +K L G H D P N++ D L ILDFGL
Sbjct: 129 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGL 166
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 42/211 (19%)
Query: 289 KEELGQP-WQ--EIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVD 344
++EL + W+ E Y LS P+ + + G V + G VAVK + RPF +++
Sbjct: 10 RQELNKTIWEVPERYQNLS--PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF--QSIIHA 65
Query: 345 LFIIRNLGLALRKFPQVSIDVVGLVDEWA-ARFFEELDYVNEGENGTLFAEMMKTDLPQV 403
R L L L+ +V+GL+D + AR EE + V L +M DL +
Sbjct: 66 KRTYRELRL-LKHMKHE--NVIGLLDVFTPARSLEEFNDV------YLVTHLMGADLNNI 116
Query: 404 VIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHP 463
V K + T+ V L+ ++ LK + H D P
Sbjct: 117 V----------------------KCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKP 153
Query: 464 GNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
NL D +L ILD GL + TDD+ G +
Sbjct: 154 SNLAVNEDCELKILDGGLA-RHTDDEMTGYV 183
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 87/214 (40%), Gaps = 44/214 (20%)
Query: 296 WQEIYSELSSSPIAAASLGQVYKGRLKENGDLVAVK-VQRPFVLETVTVDLFIIRNLG-L 353
W+ + +S + + + + G V K +G+ VA+K + RPF E +F R L
Sbjct: 38 WELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE-----IFAKRAYREL 92
Query: 354 ALRKFPQVSIDVVGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYT 413
L K Q +V+GL+D F + + L M+TDL +++
Sbjct: 93 LLLKHMQHE-NVIGLLD-----VFTPASSLRNFYDFYLVMPFMQTDLQKIM--------- 137
Query: 414 SRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGK 473
G + S E + LV ++ LK + G H D PGNL D +
Sbjct: 138 -----------GMEFS---EEKIQYLV-YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE 182
Query: 474 LAILDFGLVTKLTDDQKYGMIEAIAHLIHRDYEA 507
L ILDFGL ++ E +++ R Y A
Sbjct: 183 LKILDFGLA-------RHADAEMTGYVVTRWYRA 209
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Query: 406 PKTY---EKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPH 462
PK Y + RK W+ G + E V + + + ++ L G H D
Sbjct: 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLK 145
Query: 463 PGNLIRTPDGKLAILDFGLVTKLTDDQK 490
P N+ T D + + DFGLVT + D++
Sbjct: 146 PSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 20 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 78
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GE ++ K D
Sbjct: 79 YGYFHD-ATRVYLILEYAPRGEVYKELQKLSKFD-------------------------- 111
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 112 ---EQRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 158
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 20 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 78
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GE ++ K D
Sbjct: 79 YGYFHD-ATRVYLILEYAPRGEVYKELQKLSKFD-------------------------- 111
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 112 ---EQRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 158
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 448 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
+K L G H D P N++ D L ILDFGL
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 448 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
+K L G H D P N++ D L ILDFGL
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 448 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
+K L G H D P N++ D L ILDFGL
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGL 172
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 41/220 (18%)
Query: 303 LSSSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALRKFPQVS 362
L S + + V++GR K+ GDL A+KV ++ +R + + +R+F
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFN---------NISFLRPVDVQMREF---- 58
Query: 363 IDVVGLVDEWAARFFEELDYVNEGENGTLFA-EMMKTDLPQVVIPKTYEKYTSRKVLTTG 421
E L +N LFA E T +V+I + + L T
Sbjct: 59 ---------------EVLKKLNHKNIVKLFAIEEETTTRHKVLIME----FCPCGSLYTV 99
Query: 422 WIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRT--PDGK--LAIL 477
E ES+ +V V+ + L + G H + PGN++R DG+ +
Sbjct: 100 LEEPSNAYGLPESEF-LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158
Query: 478 DFGLVTKLTDDQKYGMIEAIAHLIHRD-YEAIV--KDFVK 514
DFG +L DD+++ + +H D YE V KD K
Sbjct: 159 DFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQK 198
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 89/220 (40%), Gaps = 41/220 (18%)
Query: 303 LSSSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALRKFPQVS 362
L S + + V++GR K+ GDL A+KV ++ +R + + +R+F
Sbjct: 12 LLSDILGQGATANVFRGRHKKTGDLFAIKVFN---------NISFLRPVDVQMREF---- 58
Query: 363 IDVVGLVDEWAARFFEELDYVNEGENGTLFA-EMMKTDLPQVVIPKTYEKYTSRKVLTTG 421
E L +N LFA E T +V+I + + L T
Sbjct: 59 ---------------EVLKKLNHKNIVKLFAIEEETTTRHKVLIME----FCPCGSLYTV 99
Query: 422 WIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRT--PDGK--LAIL 477
E ES+ +V V+ + L + G H + PGN++R DG+ +
Sbjct: 100 LEEPSNAYGLPESEF-LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT 158
Query: 478 DFGLVTKLTDDQKYGMIEAIAHLIHRD-YEAIV--KDFVK 514
DFG +L DD+++ + +H D YE V KD K
Sbjct: 159 DFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQK 198
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 37/195 (18%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 18 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 76
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 77 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 110
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKL 485
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 111 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 486 TDDQKYGMIEAIAHL 500
++ + + +L
Sbjct: 162 PSSRRAALCGTLDYL 176
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 418 LTTGWIEGEKLS----QSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGK 473
L T + E +KLS Q T + + EL N C+ K+++ H D P NL+ +G+
Sbjct: 96 LGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSNGE 150
Query: 474 LAILDFG 480
L I DFG
Sbjct: 151 LKIADFG 157
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 418 LTTGWIEGEKLS----QSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGK 473
L T + E +KLS Q T + + EL N C+ K+++ H D P NL+ +G+
Sbjct: 96 LGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSNGE 150
Query: 474 LAILDFG 480
L I DFG
Sbjct: 151 LKIADFG 157
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 20 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 78
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 79 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 112
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 113 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 158
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 16 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 74
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 75 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 108
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 109 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 154
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 37/195 (18%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 15 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 73
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 74 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 107
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKL 485
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 108 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFGWSVHA 158
Query: 486 TDDQKYGMIEAIAHL 500
++ + + +L
Sbjct: 159 PSSRRAALCGTLDYL 173
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 17 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 75
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 76 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 109
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 110 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 155
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 15 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 73
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 74 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 107
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 108 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 153
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 18 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 76
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 77 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 110
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 111 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 156
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 41 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 99
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 100 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 133
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 134 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 179
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 32 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 90
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 91 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 124
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 125 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 170
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 20 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 78
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 79 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 112
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 113 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 158
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 15 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 73
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 74 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 107
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 108 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 153
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 14 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 72
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 73 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 106
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 107 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 152
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 16 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 74
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 75 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 108
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 109 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 16 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 74
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 75 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 108
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 109 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 154
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 15 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 73
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 74 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 107
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 108 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 153
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 18 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 76
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 77 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 110
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 111 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 156
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 20 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 78
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 79 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 112
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 113 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 158
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 19 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 77
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 78 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 111
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 112 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 157
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 15 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 73
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 74 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 107
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 108 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 153
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 18 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 76
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 77 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 110
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 111 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 156
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 15 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 73
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 74 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 107
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 108 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 153
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 15 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 73
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 74 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 107
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 108 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 153
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 41 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 99
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 100 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 133
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 134 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 179
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 18 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 76
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 77 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 110
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 111 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 156
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 448 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
+K L G H D P N++ D L ILDFGL
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 448 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
+K L G H D P N++ D L ILDFGL
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 172
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 70/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K+ ++A+KV LE V+ + R + + + P + + +
Sbjct: 12 PLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 70
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 71 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 104
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I DFG
Sbjct: 105 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIADFG 150
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 448 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
+K L G H D P N++ D L ILDFGL
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGL 165
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 422 WIE---GEKLSQSTESDVGELVNVGV-ICYLKQLLDTGFFHADPHPGNLIRTPDGKLAIL 477
WIE GEKL + ++ E + GV + K+L+ H D P N+ ++ I
Sbjct: 124 WIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLI-----HRDLKPSNIFLVDTKQVKIG 178
Query: 478 DFGLVTKLTDDQK 490
DFGLVT L +D K
Sbjct: 179 DFGLVTSLKNDGK 191
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 448 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTK 484
L+ + G H D PGNL D +L ILDFGL +
Sbjct: 141 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 418 LTTGWIEGEKLS----QSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGK 473
L T + E +KLS Q T + + EL N C+ K+++ H D P NL+ G+
Sbjct: 92 LGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVI-----HRDIKPENLLLGSAGE 146
Query: 474 LAILDFGLVTKLTDDQKYGMIEAIAHL 500
L I DFG ++ + + +L
Sbjct: 147 LKIADFGWSVHAPSSRRAALCGTLDYL 173
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 7/68 (10%)
Query: 425 GEKLSQSTESDVGELVNVGVICYLK-------QLLDTGFFHADPHPGNLIRTPDGKLAIL 477
G L Q E+ L V YL+ L G H D P N+ P G+ +
Sbjct: 140 GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLG 199
Query: 478 DFGLVTKL 485
DFGL+ +L
Sbjct: 200 DFGLLVEL 207
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKYGMIEA 496
V+ L + GF H D P N++ G L + DFG K+ K GM+
Sbjct: 177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM---NKEGMVRC 226
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKYGMIEA 496
V+ L + GF H D P N++ G L + DFG K+ K GM+
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM---NKEGMVRC 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 444 VICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKYGMIEA 496
V+ L + GF H D P N++ G L + DFG K+ K GM+
Sbjct: 182 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM---NKEGMVRC 231
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 406 PKTY---EKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPH 462
PK Y + RK W+ + E V + + + ++ L G H D
Sbjct: 132 PKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLK 191
Query: 463 PGNLIRTPDGKLAILDFGLVTKLTDDQK 490
P N+ T D + + DFGLVT + D++
Sbjct: 192 PSNIFFTMDDVVKVGDFGLVTAMDQDEE 219
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 81/212 (38%), Gaps = 44/212 (20%)
Query: 289 KEELGQPWQEIYSELSS-SPIAAASLGQV---YKGRLKENGDLVAVK-VQRPFVLETVTV 343
++EL + E+ L P+ + + G V Y RL++ VAVK + RPF
Sbjct: 16 RQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQK---VAVKKLSRPFQ------ 66
Query: 344 DLFIIRNLGLALRKFPQVSI-DVVGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQ 402
L R LR + +V+GL+D F + + L +M DL
Sbjct: 67 SLIHARRTYRELRLLKHLKHENVIGLLD-----VFTPATSIEDFSEVYLVTTLMGADLNN 121
Query: 403 VVIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPH 462
+V SQ+ + + + ++ LK + G H D
Sbjct: 122 IVK-----------------------SQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLK 158
Query: 463 PGNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
P N+ D +L ILDFGL + D++ G +
Sbjct: 159 PSNVAVNEDSELRILDFGLARQ-ADEEMTGYV 189
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 448 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
LK + G H D P N+ D +L ILDFGL + D++ G +
Sbjct: 144 LKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQ-ADEEMTGYV 189
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 442 VGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQ 489
V + YLK+ G H D P N++ G++ + DFG+ +L DD+
Sbjct: 134 VKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 448 LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKYGMI 494
LK + G H D P N+ D +L ILDFGL + D++ G +
Sbjct: 136 LKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQ-ADEEMTGYV 181
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 17 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 75
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 76 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 109
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I +FG
Sbjct: 110 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIANFG 155
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 104/294 (35%), Gaps = 51/294 (17%)
Query: 232 RAIELRDIVTSLGPAYIKLGQALSIRPDILSPVAMVELQKLCDKVPSFPDDVAMAL-IKE 290
R + +++ +L L LS+ I+ + E+++L ++ V + L +KE
Sbjct: 119 RVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178
Query: 291 ELGQPWQEIYSELSSSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRN 350
E Y +S + Q RL D V RP L V+ +I +
Sbjct: 179 E------PFYWGVSQPDDPRELIEQCAFYRLIGEFDTHLSPVPRPMYL--VSNHRVLIND 230
Query: 351 LGLALRKFPQVSIDVVGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIP---- 406
+ + GL + + R+F DYV + D+P ++
Sbjct: 231 FNQPFQHWQNQPYAGAGLAHKRSRRYFFGEDYV---------CKFFYYDMPHGILTAEES 281
Query: 407 --KTYEKYTSRKVLT-------------------TGWIEGEKLSQSTESDV---GELVNV 442
YE + K LT +GW+ EKL SD+ GE ++
Sbjct: 282 QRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDR 341
Query: 443 -----GVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKY 491
++ L L GF+H D P N++ ++DFG + D +
Sbjct: 342 EKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 104/294 (35%), Gaps = 51/294 (17%)
Query: 232 RAIELRDIVTSLGPAYIKLGQALSIRPDILSPVAMVELQKLCDKVPSFPDDVAMAL-IKE 290
R + +++ +L L LS+ I+ + E+++L ++ V + L +KE
Sbjct: 119 RVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAVKE 178
Query: 291 ELGQPWQEIYSELSSSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRN 350
E Y +S + Q RL D V RP L V+ +I +
Sbjct: 179 E------PFYWGVSQPDDPRELIEQCAFYRLIGEFDTHLSPVPRPMYL--VSNHRVLIND 230
Query: 351 LGLALRKFPQVSIDVVGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIP---- 406
+ + GL + + R+F DYV + D+P ++
Sbjct: 231 FNQPFQHWQNQPYAGAGLAHKRSRRYFFGEDYV---------CKFFYYDMPHGILTAEES 281
Query: 407 --KTYEKYTSRKVLT-------------------TGWIEGEKLSQSTESDV---GELVNV 442
YE + K LT +GW+ EKL SD+ GE ++
Sbjct: 282 QRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDR 341
Query: 443 -----GVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKY 491
++ L L GF+H D P N++ ++DFG + D +
Sbjct: 342 EKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 37/175 (21%)
Query: 307 PIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALR-KFPQVSIDV 365
P+ G VY R K++ ++A+KV LE V+ + R + + + P + + +
Sbjct: 18 PLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI-LRL 76
Query: 366 VGLVDEWAARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEG 425
G + A R + L+Y GT++ E+ K K+
Sbjct: 77 YGYFHD-ATRVYLILEY---APLGTVYRELQKLS-----------KFDE----------- 110
Query: 426 EKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFG 480
Q T + + EL N C+ K+++ H D P NL+ G+L I +FG
Sbjct: 111 ----QRTATYITELANALSYCHSKRVI-----HRDIKPENLLLGSAGELKIANFG 156
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 442 VGVICY-----LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLT 486
+ V+C L L D H D GN++ T DG + + DFG+ K T
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 442 VGVICY-----LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLT 486
+ V+C L L D H D GN++ T DG + + DFG+ K T
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 442 VGVICY-----LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLT 486
+ V+C L L D H D GN++ T DG + + DFG+ K T
Sbjct: 137 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Query: 442 VGVICY-----LKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLT 486
+ V+C L L D H D GN++ T DG + + DFG+ K T
Sbjct: 110 IQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 159
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 10/78 (12%)
Query: 418 LTTGWIEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHA--------DPHPGNLIRT 469
L +IEG LS+ ES G L I + Q+LD G HA D P N++
Sbjct: 88 LVMEYIEGPTLSEYIESH-GPLSVDTAINFTNQILD-GIKHAHDMRIVHRDIKPQNILID 145
Query: 470 PDGKLAILDFGLVTKLTD 487
+ L I DFG+ L++
Sbjct: 146 SNKTLKIFDFGIAKALSE 163
>pdb|3NDB|B Chain B, Crystal Structure Of A Signal Sequence Bound To The Signal
Recognition Particle
Length = 454
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 707 EFLLDEIVK-GIDAVTR------EQLVQIMAVLGVGNVAPVFSMVPSFGPFKPAAL 755
E ++DE + IDA+ R E + Q+ A+ +G++ + SM+P FG P L
Sbjct: 306 EDMVDEKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGFGGAMPKEL 361
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 432 TESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIR---TPDGKLAILDFGLVTKLTD 487
TE D L+ V+ +K L D G H D P NL+ D K+ I DFGL +K+ D
Sbjct: 114 TERDASRLI-FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-SKMED 170
>pdb|2V3C|C Chain C, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
pdb|2V3C|D Chain D, Crystal Structure Of The Srp54-Srp19-7s.S Srp Rna Complex
Of M. Jannaschii
Length = 432
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 707 EFLLDEIVK-GIDAVTR------EQLVQIMAVLGVGNVAPVFSMVPSFGPFKPAAL 755
E ++DE + IDA+ R E + Q+ A+ +G++ + SM+P FG P L
Sbjct: 306 EDMVDEKTEESIDAIMRGKFTLNELMTQLEAIENMGSMKKILSMIPGFGGAMPKEL 361
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 432 TESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIR---TPDGKLAILDFGLVTKLTD 487
TE D L+ V+ +K L D G H D P NL+ D K+ I DFGL +K+ D
Sbjct: 114 TERDASRLI-FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-SKMED 170
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 422 WIE---GEKLSQSTESDVGELVNVGV-ICYLKQLLDTGFFHADPHPGNLIRTPDGKLAIL 477
WIE GEKL + ++ E + GV + K+L++ D P N+ ++ I
Sbjct: 110 WIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIN-----RDLKPSNIFLVDTKQVKIG 164
Query: 478 DFGLVTKLTDDQK 490
DFGLVT L +D K
Sbjct: 165 DFGLVTSLKNDGK 177
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 432 TESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIR---TPDGKLAILDFGLVTKLTD 487
TE D L+ V+ +K L D G H D P NL+ D K+ I DFGL +K+ D
Sbjct: 114 TERDASRLI-FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-SKMED 170
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 432 TESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIR---TPDGKLAILDFGLVTKLTD 487
TE D L+ V+ +K L D G H D P NL+ D K+ I DFGL +K+ D
Sbjct: 114 TERDASRLI-FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-SKMED 170
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 23/49 (46%)
Query: 449 KQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKYGMIEAI 497
K + ++G H D P N + D + I DFGL + D+ ++ +
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDL 193
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 423 IEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
EG S + +S + +L+N C+ +++L H D P NL+ +G+L I DFGL
Sbjct: 93 CEGGLESVTAKSFLLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 423 IEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
EG S + +S + +L+N C+ +++L H D P NL+ +G+L I DFGL
Sbjct: 93 CEGGLESVTAKSFLLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 455 GFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDDQKYGM 493
G+ H D P NL+ KL ++DFGL K ++ Y +
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL 166
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 423 IEGEKLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
EG S + +S + +L+N C+ +++L H D P NL+ +G+L I DFGL
Sbjct: 93 CEGGLESVTAKSFLLQLLNGIAYCHDRRVL-----HRDLKPQNLLINREGELKIADFGL 146
>pdb|3R75|A Chain A, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate, Glutamine And
Contaminating Zn2+
pdb|3R75|B Chain B, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate, Glutamine And
Contaminating Zn2+
pdb|3R76|A Chain A, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate And Glutamine
pdb|3R76|B Chain B, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
In Complex With Benzoate, Pyruvate And Glutamine
Length = 645
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 545 KNFNFQELAADLAQITFDYPFRIPPYFALIIRAVGVLEGIALVGNSDFAIVDEAYPYIAQ 604
+ F + A L IT D + AL + + +G F I DEAY I +
Sbjct: 82 RGFKTHDDGAPLVAITCDEHETVSAQLAL----AAIPDADTALGERHFDIDDEAYAEIVE 137
Query: 605 RLLTDE 610
R++TDE
Sbjct: 138 RVITDE 143
>pdb|3R74|A Chain A, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
pdb|3R74|B Chain B, Crystal Structure Of 2-Amino-2-Desoxyisochorismate
Synthase (Adic) Synthase Phze From Burkholderia Lata 383
Length = 645
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 545 KNFNFQELAADLAQITFDYPFRIPPYFALIIRAVGVLEGIALVGNSDFAIVDEAYPYIAQ 604
+ F + A L IT D + AL + + +G F I DEAY I +
Sbjct: 82 RGFKTHDDGAPLVAITCDEHETVSAQLAL----AAIPDADTALGERHFDIDDEAYAEIVE 137
Query: 605 RLLTDE 610
R++TDE
Sbjct: 138 RVITDE 143
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 25/139 (17%)
Query: 586 LVGNSDFAIVDEAYPYIAQRLLTDESPRLRNALRYTIYGKSGVFDAERFIDIMQAFENFI 645
L GN F ++D+A P + + +L D R N + K + + R+ +++ +N
Sbjct: 232 LGGNDAFIVLDDADPQVLRNVLND--ARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVF 289
Query: 646 TAAKSGGGEGLNGHMAELGILQSQTGYIIPVLSSSGSQPTQQIQTRAAL-----AFL--- 697
+ K+G L++ T +P +S ++ + Q + A+ F
Sbjct: 290 SNLKAGDP------------LEADT--TLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYP 335
Query: 698 -LSDKGSLFREFLLDEIVK 715
+ KG+ FR +L +I K
Sbjct: 336 EIDSKGAFFRPTILTDIAK 354
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 41/105 (39%), Gaps = 17/105 (16%)
Query: 395 MMKTDLPQVVIPKTYEKYTSRKVLTTGWIEGEKLSQSTESDVGELVNVGVI--------- 445
M + D P VV K Y Y T WI E + SD+ L N +
Sbjct: 78 MQQCDSPHVV--KYYGSYFKN---TDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQ 132
Query: 446 CYLKQLLDTGFF---HADPHPGNLIRTPDGKLAILDFGLVTKLTD 487
LK L F H D GN++ +G + DFG+ +LTD
Sbjct: 133 STLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177
>pdb|3H0G|G Chain G, Rna Polymerase Ii From Schizosaccharomyces Pombe
pdb|3H0G|S Chain S, Rna Polymerase Ii From Schizosaccharomyces Pombe
Length = 172
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 664 GILQSQTGYIIPVLSSS--GSQPTQQIQTRAALAFLLSDKGSLFREFLLDEIVKGIDAVT 721
G Q GYII VL S+ + + + F + + L+R F E+V I VT
Sbjct: 37 GTCSGQYGYIICVLDSNTIDIDKGRVVPGQGFAEFEVKYRAVLWRPFR-GEVVDAI--VT 93
Query: 722 REQLVQIMAVLGVGNVAPVFSMVPSFGPFKPAALLPTVTEEDKVI 766
+ A +G NV +VP F P A P + ED+VI
Sbjct: 94 TVNKMGFFANIGPLNVFVSSHLVPPDMKFDPTANPPNYSGEDQVI 138
>pdb|3O5A|A Chain A, Crystal Structure Of Partially Reduced Periplasmic Nitrate
Reductase From Cupriavidus Necator Using Ionic Liquids
Length = 802
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 476 ILDFGLVTKLTDDQKYGMIEAIAHLIHRDYEAIVKDFV-KLDFIPEGVN-----LEPILP 529
+ D G++ K D M+ IA+ I R+ + KDFV K EGV L P P
Sbjct: 225 LADIGIIFKPQTD--LAMLNYIANYIIRN-NKVNKDFVNKHTVFKEGVTDIGYGLRPDHP 281
Query: 530 VLAKVFDQALEGGGAKNFNFQELAADLAQITFDY 563
L K A + G AK F E A +++ DY
Sbjct: 282 -LQKAAKNASDPGAAKVITFDEFAKFVSKYDADY 314
>pdb|3ML1|A Chain A, Crystal Structure Of The Periplasmic Nitrate Reductase
From Cupriavidus Necator
Length = 802
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 476 ILDFGLVTKLTDDQKYGMIEAIAHLIHRDYEAIVKDFV-KLDFIPEGVN-----LEPILP 529
+ D G++ K D M+ IA+ I R+ + KDFV K EGV L P P
Sbjct: 225 LADIGIIFKPQTD--LAMLNYIANYIIRN-NKVNKDFVNKHTVFKEGVTDIGYGLRPDHP 281
Query: 530 VLAKVFDQALEGGGAKNFNFQELAADLAQITFDY 563
L K A + G AK F E A +++ DY
Sbjct: 282 -LQKAAKNASDPGAAKVITFDEFAKFVSKYDADY 314
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 432 TESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIR-TP--DGKLAILDFGL 481
TE D LV V+ +K L + G H D P NL+ TP + K+ I DFGL
Sbjct: 104 TEKDAS-LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGL 155
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 443 GVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGLVTKLTDD 488
G+ +K L D GF H D N++ + + DFGL L DD
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 403 VVIPKTYEKYTSRKV-LTTGWIEGEKLSQS----TESDVGELVNVGVICYLKQLLDTGFF 457
+VIPK EK+ V L + +KL ++ TE + L+ ++ +K + G
Sbjct: 120 IVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLL-YNLLVGVKYVHSAGIL 178
Query: 458 HADPHPGNLIRTPDGKLAILDFGL 481
H D P N + D + + DFGL
Sbjct: 179 HRDLKPANCLVNQDCSVKVCDFGL 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 37/175 (21%)
Query: 308 IAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALRKFPQVSIDVVG 367
I + G VYK R K G++VA+K R L+T T P +I +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIR---LDTET-------------EGVPSTAIREIS 57
Query: 368 LVDEW-AARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEGE 426
L+ E + LD ++ L E + DL +K + + G
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL--------------KKFMDASALTGI 103
Query: 427 KLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
L +S + +L+ C+ ++L H D P NL+ +G + + DFGL
Sbjct: 104 PLPL-IKSYLFQLLQGLAFCHSHRVL-----HRDLKPENLLINTEGAIKLADFGL 152
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 68/175 (38%), Gaps = 37/175 (21%)
Query: 308 IAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFIIRNLGLALRKFPQVSIDVVG 367
I + G VYK R K G++VA+K R L+T T P +I +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIR---LDTET-------------EGVPSTAIREIS 55
Query: 368 LVDEW-AARFFEELDYVNEGENGTLFAEMMKTDLPQVVIPKTYEKYTSRKVLTTGWIEGE 426
L+ E + LD ++ L E + DL +K + + G
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDL--------------KKFMDASALTGI 101
Query: 427 KLSQSTESDVGELVNVGVICYLKQLLDTGFFHADPHPGNLIRTPDGKLAILDFGL 481
L +S + +L+ C+ ++L H D P NL+ +G + + DFGL
Sbjct: 102 PLPL-IKSYLFQLLQGLAFCHSHRVL-----HRDLKPENLLINTEGAIKLADFGL 150
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,727,089
Number of Sequences: 62578
Number of extensions: 898352
Number of successful extensions: 2870
Number of sequences better than 100.0: 197
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 2723
Number of HSP's gapped (non-prelim): 222
length of query: 791
length of database: 14,973,337
effective HSP length: 107
effective length of query: 684
effective length of database: 8,277,491
effective search space: 5661803844
effective search space used: 5661803844
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)