BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046083
(790 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 169/303 (55%), Gaps = 14/303 (4%)
Query: 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAEL-RGEKAAIKKMDMQASK----EFLAELK 534
FS EL A+++FS N +G+GGFG V+ L G A+K++ + + +F E++
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 535 VLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--SGKDTLTWSARMQIALD 591
+++ H NL+RL G+C+ + LVY Y+ NG++ LR + L W R +IAL
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
SARGL Y+H+H P IHRD+K ANIL+D+ F A V DFGLAKL + V + GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711
G++ PEY G+ S K DV+ +GV+L ELI+ A + L+ + +L++
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE- 266
Query: 712 DPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM--TLSSSS 769
+ L+ LVD L +Y + V ++ ++A CTQ +P RP M +V L L+
Sbjct: 267 ---KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 323
Query: 770 EDW 772
E+W
Sbjct: 324 EEW 326
>pdb|4EBY|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
pdb|4EBZ|A Chain A, Crystal Structure Of The Ectodomain Of A Receptor Like
Kinase
Length = 212
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/187 (48%), Positives = 121/187 (64%), Gaps = 8/187 (4%)
Query: 8 CNTGCQLALASYYVWEGSNPTYISNIFGEDIAQ--------ILLYNPNIPNQNTIPSDTR 59
C T C LALASYY+ G+ + I+ IA IL YN NI +++ I +R
Sbjct: 1 CRTSCPLALASYYLENGTTLSVINQNLNSSIAPYDQINFDPILRYNSNIKDKDRIQMGSR 60
Query: 60 ISIPFSCDCLNGDFLGHTFTYETQFGDTYEKVASFAFANLTTEDWVRRVNIYEPTRIPDY 119
+ +PF C+C GDFLGH F+Y + DTYE+VA +ANLTT + ++ N + T IP
Sbjct: 61 VLVPFPCECQPGDFLGHNFSYSVRQEDTYERVAISNYANLTTMESLQARNPFPATNIPLS 120
Query: 120 AFINVTVNCSCGDRHISRDYGLFTTYPLRPAQNLSSVAAEAGVAPQSLQRYNPGTNFSAG 179
A +NV VNCSCGD +S+D+GLF TYPLRP +LSS+A +GV+ LQRYNPG NF++G
Sbjct: 121 ATLNVLVNCSCGDESVSKDFGLFVTYPLRPEDSLSSIARSSGVSADILQRYNPGVNFNSG 180
Query: 180 TGLVFVP 186
G+V+VP
Sbjct: 181 NGIVYVP 187
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 117/188 (62%), Gaps = 9/188 (4%)
Query: 215 CSKGCDLALASYYLWKGANLTFISKVFDTSI--------KYILSFNPQITNKDKILAGTR 266
C C LALASYYL G L+ I++ ++SI IL +N I +KD+I G+R
Sbjct: 1 CRTSCPLALASYYLENGTTLSVINQNLNSSIAPYDQINFDPILRYNSNIKDKDRIQMGSR 60
Query: 267 INVPFSCNCIQNKFLGHSFSYKVKSGNTYKRIAELIYANLTTLDWLKSSNAYDENHTPDX 326
+ VPF C C FLGH+FSY V+ +TY+R+A YANLTT++ L++ N + + P
Sbjct: 61 VLVPFPCECQPGDFLGHNFSYSVRQEDTYERVAISNYANLTTMESLQARNPFPATNIP-L 119
Query: 327 XXXXXXXXXXXXGSKSVSKDYGLFLTYPLRPGENLSSIANEFELSSELLQSYNPTLDFIS 386
G +SVSKD+GLF+TYPLRP ++LSSIA +S+++LQ YNP ++F S
Sbjct: 120 SATLNVLVNCSCGDESVSKDFGLFVTYPLRPEDSLSSIARSSGVSADILQRYNPGVNFNS 179
Query: 387 GSGLAFVP 394
G+G+ +VP
Sbjct: 180 GNGIVYVP 187
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 168/303 (55%), Gaps = 14/303 (4%)
Query: 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAEL-RGEKAAIKKMDMQASK----EFLAELK 534
FS EL A+++F N +G+GGFG V+ L G A+K++ + ++ +F E++
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 535 VLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--SGKDTLTWSARMQIALD 591
+++ H NL+RL G+C+ + LVY Y+ NG++ LR + L W R +IAL
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
SARGL Y+H+H P IHRD+K ANIL+D+ F A V DFGLAKL + V + G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711
G++ PEY G+ S K DV+ +GV+L ELI+ A + L+ + +L++
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE- 258
Query: 712 DPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM--TLSSSS 769
+ L+ LVD L +Y + V ++ ++A CTQ +P RP M +V L L+
Sbjct: 259 ---KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 315
Query: 770 EDW 772
E+W
Sbjct: 316 EEW 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 170/287 (59%), Gaps = 17/287 (5%)
Query: 484 ELAKATNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQASK---EFLAELKVLTHV 539
+L +ATN+F IG G FG V+ LR G K A+K+ ++S+ EF E++ L+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLT--WSARMQIALDSARGL 596
H +LV LIG+C E + L+Y+Y+ENGNL +HL GS T++ W R++I + +ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL-TEVGSASVHTRLVGTFGYMP 655
Y+H + IHRD+K NIL+D+NF K+ DFG++K TE+G + + GT GY+
Sbjct: 153 HYLHTRAI---IHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PEY G ++ K DVY+FGVVL+E++ A A+V+ + +V L E + + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ-----SLPREMVNLAEWAVESHNNGQ 264
Query: 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762
L+++VDP L D +S+RK A C + + RPSM ++ L
Sbjct: 265 -LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 169/287 (58%), Gaps = 17/287 (5%)
Query: 484 ELAKATNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQASK---EFLAELKVLTHV 539
+L +ATN+F IG G FG V+ LR G K A+K+ ++S+ EF E++ L+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLT--WSARMQIALDSARGL 596
H +LV LIG+C E + L+Y+Y+ENGNL +HL GS T++ W R++I + +ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL-TEVGSASVHTRLVGTFGYMP 655
Y+H + IHRD+K NIL+D+NF K+ DFG++K TE+ + + GT GY+
Sbjct: 153 HYLHTRAI---IHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PEY G ++ K DVY+FGVVL+E++ A A+V+ + +V L E + + +
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ-----SLPREMVNLAEWAVESHNNGQ 264
Query: 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762
L+++VDP L D +S+RK A C + + RPSM ++ L
Sbjct: 265 -LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 170/305 (55%), Gaps = 28/305 (9%)
Query: 480 FSYEELAKATNDFSM------GNKIGQGGFGAVFYAELRGEKAAIKKM----DM---QAS 526
FS+ EL TN+F GNK+G+GGFG V+ + A+KK+ D+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 527 KEFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG-SGKDTLTWSA 584
++F E+KV+ H NLV L+G+ +G L LVY Y+ NG+L L G L+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV- 643
R +IA +A G+ ++HE+ +IHRDIK ANIL+D+ F AK++DFGLA+ +E + +V
Sbjct: 135 RCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703
+R+VGT YM PE A GE++PK D+Y+FGVVL E+I+ + AV + E L
Sbjct: 192 XSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-------QLL 243
Query: 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763
+ D + ++ +D ++ +D SV M +A C E RP ++ + L
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
Query: 764 TLSSS 768
+++S
Sbjct: 303 EMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 169/305 (55%), Gaps = 28/305 (9%)
Query: 480 FSYEELAKATNDFSM------GNKIGQGGFGAVFYAELRGEKAAIKKM----DM---QAS 526
FS+ EL TN+F GNK+G+GGFG V+ + A+KK+ D+ +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 527 KEFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG-SGKDTLTWSA 584
++F E+KV+ H NLV L+G+ +G L LVY Y+ NG+L L G L+W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV- 643
R +IA +A G+ ++HE+ +IHRDIK ANIL+D+ F AK++DFGLA+ +E + +V
Sbjct: 135 RCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703
R+VGT YM PE A GE++PK D+Y+FGVVL E+I+ + AV + E L
Sbjct: 192 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-------QLL 243
Query: 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763
+ D + ++ +D ++ +D SV M +A C E RP ++ + L
Sbjct: 244 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
Query: 764 TLSSS 768
+++S
Sbjct: 303 EMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 166/305 (54%), Gaps = 28/305 (9%)
Query: 480 FSYEELAKATNDFSM------GNKIGQGGFGAVFYAELRGEKAAIKKMDM-------QAS 526
FS+ EL TN+F GNK+G+GGFG V+ + A+KK+ +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 527 KEFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG-SGKDTLTWSA 584
++F E+KV+ H NLV L+G+ +G L LVY Y+ NG+L L G L+W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV- 643
R +IA +A G+ ++HE+ +IHRDIK ANIL+D+ F AK++DFGLA+ +E + V
Sbjct: 129 RCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703
R+VGT YM PE A GE++PK D+Y+FGVVL E+I+ + AV + E L
Sbjct: 186 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-------QLL 237
Query: 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763
+ D + ++ +D ++ +D SV M +A C E RP ++ + L
Sbjct: 238 LDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
Query: 764 TLSSS 768
+++S
Sbjct: 297 EMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/305 (35%), Positives = 160/305 (52%), Gaps = 28/305 (9%)
Query: 480 FSYEELAKATNDFSM------GNKIGQGGFGAVFYAELRGEKAAIKKMDM-------QAS 526
FS+ EL TN+F GNK G+GGFG V+ + A+KK+ +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 527 KEFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG-SGKDTLTWSA 584
++F E+KV H NLV L+G+ +G L LVY Y NG+L L G L+W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV- 643
R +IA +A G+ ++HE+ +IHRDIK ANIL+D+ F AK++DFGLA+ +E + V
Sbjct: 126 RCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703
+R+VGT Y PE A GE++PK D+Y+FGVVL E+I+ + AV + E L
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP-------QLL 234
Query: 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763
+ D + ++ +D + +D SV +A C E RP ++ + L
Sbjct: 235 LDIKEEIEDEEKTIEDYIDKKX-NDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
Query: 764 TLSSS 768
++S
Sbjct: 294 EXTAS 298
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 139/288 (48%), Gaps = 34/288 (11%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRGEKAAIK---KMDMQASK--EFLAELKVLTHVHHLNLV 545
D ++ KIG G FG V AE G A+K + D A + EFL E+ ++ + H N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 546 RLIGYCVEG-SLFLVYEYIENGNLNQHLRGSG-KDTLTWSARMQIALDSARGLEYIHEHT 603
+G + +L +V EY+ G+L + L SG ++ L R+ +A D A+G+ Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL-VGTFGYMPPEYAQYG 662
P+ +HRD+K N+L+DK + KV DFGL++L S + ++ GT +M PE +
Sbjct: 158 PPI-VHRDLKSPNLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 663 EVSPKIDVYAFGVVLYELISAMEAVVKTNET-ITESTGLVALFEEVLRQPDPREDLQRLV 721
+ K DVY+FGV+L+EL + + N + + G E+ R +P
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP-------- 266
Query: 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
++A + C P RPS I+ L L S+
Sbjct: 267 --------------QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 137/287 (47%), Gaps = 32/287 (11%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRGEKAAIK---KMDMQASK--EFLAELKVLTHVHHLNLV 545
D ++ KIG G FG V AE G A+K + D A + EFL E+ ++ + H N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 546 RLIGYCVEG-SLFLVYEYIENGNLNQHLRGSG-KDTLTWSARMQIALDSARGLEYIHEHT 603
+G + +L +V EY+ G+L + L SG ++ L R+ +A D A+G+ Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
P+ +HR++K N+L+DK + KV DFGL++L S + GT +M PE +
Sbjct: 158 PPI-VHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKS-AAGTPEWMAPEVLRDEP 215
Query: 664 VSPKIDVYAFGVVLYELISAMEAVVKTNET-ITESTGLVALFEEVLRQPDPREDLQRLVD 722
+ K DVY+FGV+L+EL + + N + + G E+ R +P
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP--------- 266
Query: 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
++A + C P RPS I+ L L S+
Sbjct: 267 -------------QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 148/315 (46%), Gaps = 50/315 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE----KAAIKKMDMQASKE----FLAELKVLTHV-H 540
ND + IG+G FG V A ++ + AAIK+M ASK+ F EL+VL + H
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 541 HLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLR--------------GSGKDTLTWSAR 585
H N++ L+G C G L+L EY +GNL LR S TL+
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
+ A D ARG++Y+ + +IHRD+ NIL+ +N+ AK+ADFGL++ EV
Sbjct: 135 LHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFE 705
RL +M E Y + DV+++GV+L+E++S + T E L+E
Sbjct: 192 RL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-LGGTPYCGMTCAE------LYE 242
Query: 706 EVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
++ + RL P DD D L R C +E P RPS I+V+L +
Sbjct: 243 KLPQG-------YRLEKPLNCDDEVYD-------LMRQCWREKPYERPSFAQILVSLNRM 288
Query: 766 SSSSEDWDIGSFYEN 780
+ + + YE
Sbjct: 289 LEERKTYVNTTLYEK 303
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 148/315 (46%), Gaps = 50/315 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE----KAAIKKMDMQASKE----FLAELKVLTHV-H 540
ND + IG+G FG V A ++ + AAIK+M ASK+ F EL+VL + H
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 541 HLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLR--------------GSGKDTLTWSAR 585
H N++ L+G C G L+L EY +GNL LR S TL+
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
+ A D ARG++Y+ + +IHRD+ NIL+ +N+ AK+ADFGL++ EV
Sbjct: 145 LHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFE 705
RL +M E Y + DV+++GV+L+E++S + T E L+E
Sbjct: 202 RL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-LGGTPYCGMTCAE------LYE 252
Query: 706 EVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
++ + RL P DD D L R C +E P RPS I+V+L +
Sbjct: 253 KLPQG-------YRLEKPLNCDDEVYD-------LMRQCWREKPYERPSFAQILVSLNRM 298
Query: 766 SSSSEDWDIGSFYEN 780
+ + + YE
Sbjct: 299 LEERKTYVNTTLYEK 313
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 10/219 (4%)
Query: 467 PGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS 526
P V TV EF A + + IG+G FG V + RG K A+K + A+
Sbjct: 170 PKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDAT 229
Query: 527 KE-FLAELKVLTHVHHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTLTWS 583
+ FLAE V+T + H NLV+L+G VE G L++V EY+ G+L +LR G+ L
Sbjct: 230 AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGD 289
Query: 584 ARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643
++ +LD +EY+ + ++HRD+ N+L+ ++ AKV+DFGL K E S
Sbjct: 290 CLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQD 344
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+L + PE + + S K DV++FG++L+E+ S
Sbjct: 345 TGKL--PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 148/314 (47%), Gaps = 50/314 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE----KAAIKKMDMQASKE----FLAELKVLTHV-H 540
ND + IG+G FG V A ++ + AAIK+M ASK+ F EL+VL + H
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 541 HLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLR--------------GSGKDTLTWSAR 585
H N++ L+G C G L+L EY +GNL LR S TL+
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
+ A D ARG++Y+ + +IHR++ NIL+ +N+ AK+ADFGL++ EV
Sbjct: 142 LHFAADVARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFE 705
RL +M E Y + DV+++GV+L+E++S + T E L+E
Sbjct: 199 RL--PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS-LGGTPYCGMTCAE------LYE 249
Query: 706 EVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
++ + RL P DD D L R C +E P RPS I+V+L +
Sbjct: 250 KLPQG-------YRLEKPLNCDDEVYD-------LMRQCWREKPYERPSFAQILVSLNRM 295
Query: 766 SSSSEDWDIGSFYE 779
+ + + YE
Sbjct: 296 LEERKTYVNTTLYE 309
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 39/291 (13%)
Query: 471 GITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKE-F 529
G +V EF A + + IG+G FG V + RG K A+K + A+ + F
Sbjct: 2 GGSVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAF 61
Query: 530 LAELKVLTHVHHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQ 587
LAE V+T + H NLV+L+G VE G L++V EY+ G+L +LR G+ L ++
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121
Query: 588 IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL 647
+LD +EY+ + ++HRD+ N+L+ ++ AKV+DFGL K E S +L
Sbjct: 122 FSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL 176
Query: 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEV 707
+ PE + + S K DV++FG++L+E+ S
Sbjct: 177 --PVKWTAPEALREKKFSTKSDVWSFGILLWEIYS------------------------F 210
Query: 708 LRQPDPREDLQRLVDPRLGDDYPIDSVR----KMARLARACTQENPQLRPS 754
R P PR L+ +V PR+ Y +D+ + + + C + +RPS
Sbjct: 211 GRVPYPRIPLKDVV-PRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPS 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 221
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 216
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 125 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTA 181
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 217
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 218 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 216
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 216
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + ++ + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 221
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 216
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 138/298 (46%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + ++ + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 123
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 216
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 67
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 127
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 128 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 184
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 185 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 220
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 221 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 76
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 77 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 136
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 137 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 193
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 194 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 229
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 230 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 286
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 37/294 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 221
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
DL ++ + L DY P K+ L RAC Q NP RPS I A T+
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 37/294 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 221
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
DL ++ + L DY P K+ L RAC Q NP RPS I A T+
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 68
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 69 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 129 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 186 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 221
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 222 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 126 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 182
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 218
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 219 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 137/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 126 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 182
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 218
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 219 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 136/294 (46%), Gaps = 37/294 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 63
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 123
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + H +
Sbjct: 124 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 180
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 216
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
DL ++ + L DY P K+ L RAC Q NP RPS I A T+
Sbjct: 217 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 133/272 (48%), Gaps = 39/272 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKE-FLAELKVLTHVHHLNLVRLI 548
+ + IG+G FG V + RG K A+K + A+ + FLAE V+T + H NLV+L+
Sbjct: 12 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 71
Query: 549 GYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G VE G L++V EY+ G+L +LR G+ L ++ +LD +EY+ +
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--- 128
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSP 666
++HRD+ N+L+ ++ AKV+DFGL K E S +L + PE + S
Sbjct: 129 FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREAAFST 184
Query: 667 KIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
K DV++FG++L+E+ S R P PR L+ +V PR+
Sbjct: 185 KSDVWSFGILLWEIYS------------------------FGRVPYPRIPLKDVV-PRVE 219
Query: 727 DDYPIDSVR----KMARLARACTQENPQLRPS 754
Y +D+ + + + C + +RPS
Sbjct: 220 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPS 251
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 134/272 (49%), Gaps = 39/272 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKE-FLAELKVLTHVHHLNLVRLI 548
+ + IG+G FG V + RG K A+K + A+ + FLAE V+T + H NLV+L+
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLL 65
Query: 549 GYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G VE G L++V EY+ G+L +LR G+ L ++ +LD +EY+ +
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN--- 122
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSP 666
++HRD+ N+L+ ++ AKV+DFGL K E S +L + PE + + S
Sbjct: 123 FVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREKKFST 178
Query: 667 KIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
K DV++FG++L+E+ S R P PR L+ +V PR+
Sbjct: 179 KSDVWSFGILLWEIYS------------------------FGRVPYPRIPLKDVV-PRVE 213
Query: 727 DDYPIDSVR----KMARLARACTQENPQLRPS 754
Y +D+ + + + C + +RPS
Sbjct: 214 KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPS 245
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 29/285 (10%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVLTHVHHLNLV 545
D +M +K+G G FG V+ + A+K K D +EFL E V+ + H NLV
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 546 RLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
+L+G C E +++ E++ GNL +LR + ++ + +A + +EY+ +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN- 129
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
+IHRD+ N L+ +N KVADFGL++L + + H + PE Y +
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 665 SPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724
S K DV+AFGV+L+E+ + ++ G+ DP + + L++
Sbjct: 188 SIKSDVWAFGVLLWEIATY---------GMSPYPGI-----------DPSQ-VYELLEKD 226
Query: 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
+ P K+ L RAC Q NP RPS I A T+ S
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 270
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + ++ + +A +
Sbjct: 271 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA 330
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHR++ N L+ +N KVADFGL++L + + H +
Sbjct: 331 MEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTA 387
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 388 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 423
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 424 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 29/291 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVLTHVHHLNLV 545
D +M +K+G G +G V+ + A+K K D +EFL E V+ + H NLV
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 546 RLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
+L+G C E +++ E++ GNL +LR + ++ + +A + +EY+ +
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN- 129
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
+IHRD+ N L+ +N KVADFGL++L + + H + PE Y +
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKF 187
Query: 665 SPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724
S K DV+AFGV+L+E+ + ++ G+ DP + + L++
Sbjct: 188 SIKSDVWAFGVLLWEIATY---------GMSPYPGI-----------DPSQ-VYELLEKD 226
Query: 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIG 775
+ P K+ L RAC Q NP RPS I A T+ S D G
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEG 277
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 142/312 (45%), Gaps = 43/312 (13%)
Query: 467 PGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMD 522
P V G++ + Y++ D +M +K+G G +G V+ + A+K K D
Sbjct: 242 PTVYGVSPN------YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 295
Query: 523 MQASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLT 581
+EFL E V+ + H NLV+L+G C E +++ E++ GNL +LR + +
Sbjct: 296 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 355
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
+ +A + +EY+ + +IHR++ N L+ +N KVADFGL++L +
Sbjct: 356 AVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 412
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701
+ H + PE Y + S K DV+AFGV+L+E+ + G+
Sbjct: 413 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM- 456
Query: 702 ALFEEVLRQPDPREDLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRA 757
P P DL ++ + L DY P K+ L RAC Q NP RPS
Sbjct: 457 --------SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 507
Query: 758 IVVALMTLSSSS 769
I A T+ S
Sbjct: 508 IHQAFETMFQES 519
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 142/312 (45%), Gaps = 43/312 (13%)
Query: 467 PGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMD 522
P V G++ + Y++ D +M +K+G G +G V+ + A+K K D
Sbjct: 200 PTVYGVSPN------YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 253
Query: 523 MQASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLT 581
+EFL E V+ + H NLV+L+G C E +++ E++ GNL +LR + +
Sbjct: 254 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVN 313
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
+ +A + +EY+ + +IHR++ N L+ +N KVADFGL++L +
Sbjct: 314 AVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 370
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701
+ H + PE Y + S K DV+AFGV+L+E+ + G+
Sbjct: 371 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM- 414
Query: 702 ALFEEVLRQPDPREDLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRA 757
P P DL ++ + L DY P K+ L RAC Q NP RPS
Sbjct: 415 --------SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 465
Query: 758 IVVALMTLSSSS 769
I A T+ S
Sbjct: 466 IHQAFETMFQES 477
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%), Gaps = 29/285 (10%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVLTHVHHLNLV 545
D +M +K+G G +G V+ + A+K K D +EFL E V+ + H NLV
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 70
Query: 546 RLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
+L+G C E +++ E++ GNL +LR + ++ + +A + +EY+ +
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN- 129
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
+IHRD+ N L+ +N KVADFGL++L + + H + PE Y +
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKF 187
Query: 665 SPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724
S K DV+AFGV+L+E+ + ++ G+ DP + + L++
Sbjct: 188 SIKSDVWAFGVLLWEIATY---------GMSPYPGI-----------DPSQ-VYELLEKD 226
Query: 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
+ P K+ L RAC Q NP RPS I A T+ S
Sbjct: 227 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 140/286 (48%), Gaps = 35/286 (12%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 14 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 72
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL S + + IA +ARG++Y+H ++
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSI-- 129
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA + S S +L G+ +M PE + + +
Sbjct: 130 -IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 666 P---KIDVYAFGVVLYELISAM--EAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720
P + DVYAFG+VLYEL++ + + + I E G +L PD
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL------SPDL------- 235
Query: 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766
++ + P ++M RL C ++ RPS I+ + L+
Sbjct: 236 --SKVRSNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEELA 275
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 496 NKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV 552
++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 553 EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDI 612
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YIHRD+
Sbjct: 88 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 144
Query: 613 KPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYA 672
+ ANIL+ K+ADFGLA+L E + + PE YG + K DV++
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 204
Query: 673 FGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYP 730
FG++L E+++ + TN + ++ E R+V P D+ P
Sbjct: 205 FGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP---DNCP 245
Query: 731 IDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770
++ +L R C +E P+ RP+ + L +++E
Sbjct: 246 ----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 281
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 136/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 64
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 124
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + +
Sbjct: 125 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA 181
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 182 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 217
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 218 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 136/298 (45%), Gaps = 37/298 (12%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVL 536
+Y++ D +M +K+G G +G V+ + A+K K D +EFL E V+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 65
Query: 537 THVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H NLV+L+G C E +++ E++ GNL +LR + + + +A +
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA 125
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+EY+ + +IHRD+ N L+ +N KVADFGL++L + + +
Sbjct: 126 MEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTA 182
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE Y + S K DV+AFGV+L+E+ + G+ P P
Sbjct: 183 PESLAYNKFSIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGI 218
Query: 716 DLQRLVDPRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
DL ++ + L DY P K+ L RAC Q NP RPS I A T+ S
Sbjct: 219 DLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
+ ++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YI
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ K+ADFGLA+L E + + PE YG + K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 669 DVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
DV++FG++L E+++ + TN + ++ E R+V P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP--- 232
Query: 727 DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770
D+ P ++ +L R C +E P+ RP+ + L +++E
Sbjct: 233 DNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 31/279 (11%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
++G G FG V+ G K A+K K + FLAE ++ + H LVRL +
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
++++ EY+ENG+L L+ LT + + +A A G+ +I E YIHRD++
Sbjct: 88 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 144
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ K+ADFGLA+L E + + PE YG + K DV++F
Sbjct: 145 AANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 204
Query: 674 GVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPI 731
G++L E+++ + TN + ++ E R+V P D+ P
Sbjct: 205 GILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP---DNCP- 244
Query: 732 DSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770
++ +L R C +E P+ RP+ + L +++E
Sbjct: 245 ---EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 280
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
+ ++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YI
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ K+ADFGLA+L E + + PE YG + K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 669 DVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
DV++FG++L E+++ + TN + ++ E R+V P
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP--- 238
Query: 727 DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770
D+ P ++ +L R C +E P+ RP+ + L +++E
Sbjct: 239 DNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 278
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
+ ++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 76
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YI
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 133
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ K+ADFGLA+L E + + PE YG + K
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 669 DVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
DV++FG++L E+++ + TN + ++ E R+V P
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP--- 234
Query: 727 DDYPIDSVRKMARLARACTQENPQLRPS 754
D+ P ++ +L R C +E P+ RP+
Sbjct: 235 DNCP----EELYQLMRLCWKERPEDRPT 258
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 134/289 (46%), Gaps = 37/289 (12%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIK--KMDMQASKEFLAELKVLTHVHHLNLV 545
D +M +K+G G +G V+ + A+K K D +EFL E V+ + H NLV
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 546 RLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
+L+G C +E ++V EY+ GNL +LR ++ +T + +A + +EY+ +
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN- 150
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
+IHRD+ N L+ +N KVADFGL++L + + H + PE Y
Sbjct: 151 --FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTF 208
Query: 665 SPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724
S K DV+AFGV+L+E+ + G+ P P DL ++ D
Sbjct: 209 SIKSDVWAFGVLLWEIA---------------TYGM---------SPYPGIDLSQVYD-L 243
Query: 725 LGDDYPIDSVR----KMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769
L Y ++ K+ L RAC + +P RPS A T+ S
Sbjct: 244 LEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHDS 292
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
+ ++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YI
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ K+ADFGLA+L E + + PE YG + K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 669 DVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
DV++FG++L E+++ + TN + ++ E R+V P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP--- 232
Query: 727 DDYPIDSVRKMARLARACTQENPQLRPS 754
D+ P ++ +L R C +E P+ RP+
Sbjct: 233 DNCP----EELYQLMRLCWKERPEDRPT 256
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 31/284 (10%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
+ ++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 79
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YI
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 136
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ K+ADFGLA+L E + + PE YG + K
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 669 DVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
DV++FG++L E+++ + TN + ++ E R+V P
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP--- 237
Query: 727 DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770
D+ P ++ +L R C +E P+ RP+ + L +++E
Sbjct: 238 DNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 277
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
+ ++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 75
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YI
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 132
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ K+ADFGLA+L E + + PE YG + K
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 669 DVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
DV++FG++L E+++ + TN + ++ E R+V P
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP--- 233
Query: 727 DDYPIDSVRKMARLARACTQENPQLRPS 754
D+ P ++ +L R C +E P+ RP+
Sbjct: 234 DNCP----EELYQLMRLCWKERPEDRPT 257
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 31/280 (11%)
Query: 496 NKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV 552
++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 88
Query: 553 EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDI 612
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YIHRD+
Sbjct: 89 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDL 145
Query: 613 KPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYA 672
+ ANIL+ K+ADFGLA+L E + + PE YG + K DV++
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 205
Query: 673 FGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYP 730
FG++L E+++ + TN + ++ E R+V P D+ P
Sbjct: 206 FGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP---DNCP 246
Query: 731 IDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770
++ +L R C +E P+ RP+ + L +++E
Sbjct: 247 ----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 282
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
+ ++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YI
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ K+ADFGLA+L E + + PE YG + K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 669 DVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
DV++FG++L E+++ + TN + ++ E R+V P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP--- 232
Query: 727 DDYPIDSVRKMARLARACTQENPQLRPS 754
D+ P ++ +L R C +E P+ RP+
Sbjct: 233 DNCP----EELYQLMRLCWKERPEDRPT 256
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 31/268 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
+ ++G G FG V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 80
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YI
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 137
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ K+ADFGLA+L E + + PE YG + K
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 669 DVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
DV++FG++L E+++ + TN + ++ E R+V P
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP--- 238
Query: 727 DDYPIDSVRKMARLARACTQENPQLRPS 754
D+ P ++ +L R C +E P+ RP+
Sbjct: 239 DNCP----EELYQLMRLCWKERPEDRPT 262
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 139/286 (48%), Gaps = 35/286 (12%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 26 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL S + + IA +ARG++Y+H ++
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSI-- 141
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA S S +L G+ +M PE + + +
Sbjct: 142 -IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 666 P---KIDVYAFGVVLYELISAM--EAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720
P + DVYAFG+VLYEL++ + + + I E G +L PD
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL------SPDL------- 247
Query: 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766
++ + P ++M RL C ++ RPS I+ + L+
Sbjct: 248 --SKVRSNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 125/263 (47%), Gaps = 31/263 (11%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
++G G FG V+ G K A+K K + FLAE ++ + H LVRL +
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
++++ EY+ENG+L L+ LT + + +A A G+ +I E YIHRD++
Sbjct: 75 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLR 131
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ K+ADFGLA+L E + + PE YG + K DV++F
Sbjct: 132 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 191
Query: 674 GVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPI 731
G++L E+++ + TN + ++ E R+V P D+ P
Sbjct: 192 GILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP---DNCP- 231
Query: 732 DSVRKMARLARACTQENPQLRPS 754
++ +L R C +E P+ RP+
Sbjct: 232 ---EELYQLMRLCWKERPEDRPT 251
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 138/286 (48%), Gaps = 35/286 (12%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 26 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 84
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY L +V ++ E +L HL S + + IA +ARG++Y+H ++
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSI-- 141
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA S S +L G+ +M PE + + +
Sbjct: 142 -IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 666 P---KIDVYAFGVVLYELISAM--EAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720
P + DVYAFG+VLYEL++ + + + I E G +L PD
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL------SPDL------- 247
Query: 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766
++ + P ++M RL C ++ RPS I+ + L+
Sbjct: 248 --SKVRSNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEELA 287
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 144/308 (46%), Gaps = 57/308 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAE---LRGEKAAI-------KKMDMQASKEFLAELKVLTHV 539
++ + ++G+G FG VF AE L E+ I K A K+F E ++LT++
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDT-----------LTWSARMQ 587
H ++V+ G CVEG L +V+EY+++G+LN+ LR G D LT S +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 588 IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK---LTEVGSASVH 644
IA A G+ Y+ ++HRD+ N L+ +N K+ DFG+++ T+ H
Sbjct: 133 IAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGH 189
Query: 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEA---VVKTNETITESTGLV 701
T L +MPPE Y + + + DV++ GVVL+E+ + + + NE I
Sbjct: 190 TML--PIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI------- 240
Query: 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761
E + Q LQR P +++ L C Q P +R +++ I
Sbjct: 241 ----ECITQG---RVLQR----------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTL 283
Query: 762 LMTLSSSS 769
L L+ +S
Sbjct: 284 LQNLAKAS 291
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 31/263 (11%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
++G G FG V+ G K A+K K + FLAE ++ + H LVRL +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
++++ EY+ENG+L L+ LT + + +A A G+ +I E YIHR+++
Sbjct: 76 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNLR 132
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ K+ADFGLA+L E + + PE YG + K DV++F
Sbjct: 133 AANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 192
Query: 674 GVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPI 731
G++L E+++ + TN + ++ E R+V P D+ P
Sbjct: 193 GILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP---DNCP- 232
Query: 732 DSVRKMARLARACTQENPQLRPS 754
++ +L R C +E P+ RP+
Sbjct: 233 ---EELYQLMRLCWKERPEDRPT 252
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 131/284 (46%), Gaps = 31/284 (10%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
+ ++G G G V+ G K A+K K + FLAE ++ + H LVRL
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY 74
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ EY+ENG+L L+ LT + + +A A G+ +I E YI
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YI 131
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ K+ADFGLA+L E + + PE YG + K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 669 DVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726
DV++FG++L E+++ + TN + ++ E R+V P
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL----------------ERGYRMVRP--- 232
Query: 727 DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770
D+ P ++ +L R C +E P+ RP+ + L +++E
Sbjct: 233 DNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 307
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 368 GILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 307
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 368 GILLTELTT 376
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 390
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 391 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 450
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 451 GILLTELTT 459
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 202 GILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 307
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 308 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 368 GILLTELTT 376
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 202 GILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 134
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 135 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 194
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 195 GILLTELTT 203
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 130
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 131 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 190
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 191 GILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 132
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 133 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 193 GILLTELTT 201
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 202 GILLTELTT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+ +V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 131
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 132 AANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 191
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 192 GILLTELTT 200
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 202 GILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + ++ A G+ Y+ Y+HRD++
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLR 138
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 199 GILLTELTT 207
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 202 GILLTELTT 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 98/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + ++ A G+ Y+ Y+HRD++
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDLR 138
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 139 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 199 GILLTELTT 207
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 202 GILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 141
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 202 GILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD+
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLA 141
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGLA+L E + + PE A YG + K DV++F
Sbjct: 142 AANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 202 GILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 6/189 (3%)
Query: 497 KIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE 553
K+GQG FG V+ G + AIK K + + FL E +V+ + H LV+L E
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK 613
+++V EY+ G+L L+G L + +A A G+ Y+ Y+HRD++
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLR 308
Query: 614 PANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAF 673
ANIL+ +N KVADFGL +L E + + PE A YG + K DV++F
Sbjct: 309 AANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 368
Query: 674 GVVLYELIS 682
G++L EL +
Sbjct: 369 GILLTELTT 377
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 15 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 130
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA + S S +L G+ +M PE + + +
Sbjct: 131 -IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 190 PYSFQSDVYAFGIVLYELMTG 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 37 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 95
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 152
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA + S S +L G+ +M PE + + +
Sbjct: 153 -IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 212 PYSFQSDVYAFGIVLYELMTG 232
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 12 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 70
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 127
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA + S S +L G+ +M PE + + +
Sbjct: 128 -IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 187 PYSFQSDVYAFGIVLYELMTG 207
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 15 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 73
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 130
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA + S S +L G+ +M PE + + +
Sbjct: 131 -IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 190 PYSFQSDVYAFGIVLYELMTG 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 38 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 153
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA + S S +L G+ +M PE + + +
Sbjct: 154 -IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 213 PYSFQSDVYAFGIVLYELMTG 233
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 109/201 (54%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 10 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 125
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA + S S +L G+ +M PE + + +
Sbjct: 126 -IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 133/274 (48%), Gaps = 34/274 (12%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQAS-KEFLAELKVLTHVHHLNLVRLIGYCVEGSL 556
+G+G FG V A+ R + AIK+++ ++ K F+ EL+ L+ V+H N+V+L G C+ +
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-NPV 75
Query: 557 FLVYEYIENGNLNQHLRGSGK-DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPA 615
LV EY E G+L L G+ T + M L ++G+ Y+H IHRD+KP
Sbjct: 76 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 135
Query: 616 NILIDKNFRA-KVADFGLAKLTEVGSASVHTRLV---GTFGYMPPEYAQYGEVSPKIDVY 671
N+L+ K+ DFG A + T + G+ +M PE + S K DV+
Sbjct: 136 NLLLVAGGTVLKICDFGTA-------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF 188
Query: 672 AFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPI 731
++G++L+E+I+ K + I + +P ++L + PI
Sbjct: 189 SWGIILWEVITRR----KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK----------PI 234
Query: 732 DSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+S+ M R C ++P RPSM IV + L
Sbjct: 235 ESL--MTR----CWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 133/274 (48%), Gaps = 34/274 (12%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQAS-KEFLAELKVLTHVHHLNLVRLIGYCVEGSL 556
+G+G FG V A+ R + AIK+++ ++ K F+ EL+ L+ V+H N+V+L G C+ +
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL-NPV 74
Query: 557 FLVYEYIENGNLNQHLRGSGK-DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPA 615
LV EY E G+L L G+ T + M L ++G+ Y+H IHRD+KP
Sbjct: 75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 134
Query: 616 NILIDKNFRA-KVADFGLAKLTEVGSASVHTRLV---GTFGYMPPEYAQYGEVSPKIDVY 671
N+L+ K+ DFG A + T + G+ +M PE + S K DV+
Sbjct: 135 NLLLVAGGTVLKICDFGTA-------CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVF 187
Query: 672 AFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPI 731
++G++L+E+I+ K + I + +P ++L + PI
Sbjct: 188 SWGIILWEVITRR----KPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK----------PI 233
Query: 732 DSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+S+ M R C ++P RPSM IV + L
Sbjct: 234 ESL--MTR----CWSKDPSQRPSMEEIVKIMTHL 261
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 10 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 125
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA + S S +L G+ +M PE + + +
Sbjct: 126 -IHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 33/221 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYAE----------LRGEKAAIKKMDMQASKEFLAELKVLTHV 539
D + ++G+G FG VF AE + A+K + A K+F E ++LT++
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL 74
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDT--------------LTWSA 584
H ++V+ G C +G L +V+EY+++G+LN+ LR G D L S
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK---LTEVGSA 641
+ IA A G+ Y+ ++HRD+ N L+ N K+ DFG+++ T+
Sbjct: 135 MLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
HT L +MPPE Y + + + DV++FGV+L+E+ +
Sbjct: 192 GGHTML--PIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 38 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 96
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 153
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA S S +L G+ +M PE + + +
Sbjct: 154 -IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 213 PYSFQSDVYAFGIVLYELMTG 233
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 30 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 88
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 145
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA S S +L G+ +M PE + + +
Sbjct: 146 -IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 205 PYSFQSDVYAFGIVLYELMTG 225
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 108/201 (53%), Gaps = 14/201 (6%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVR 546
++G +IG G FG V+ + G+ A+K +++ Q + F E+ VL H+N++
Sbjct: 10 ITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL 68
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+GY + L +V ++ E +L HL + + IA +A+G++Y+H ++
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSI-- 125
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVS 665
IHRD+K NI + ++ K+ DFGLA S S +L G+ +M PE + + +
Sbjct: 126 -IHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 666 P---KIDVYAFGVVLYELISA 683
P + DVYAFG+VLYEL++
Sbjct: 185 PYSFQSDVYAFGIVLYELMTG 205
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 129/265 (48%), Gaps = 29/265 (10%)
Query: 500 QGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKV--LTHVHHLNLVRLIGYCVEGS-- 555
+G FG V+ A+L E A+K +Q + + E +V L + H N+++ IG G+
Sbjct: 34 RGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93
Query: 556 ---LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT-------VP 605
L+L+ + E G+L+ L+ + ++W+ IA ARGL Y+HE P
Sbjct: 94 DVDLWLITAFHEKGSLSDFLKA---NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKP 150
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPEYAQYG-- 662
HRDIK N+L+ N A +ADFGLA E G ++ T VGT YM PE +
Sbjct: 151 AISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAIN 210
Query: 663 ---EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719
+ +ID+YA G+VL+EL S A + + E + FEE + Q ED+Q
Sbjct: 211 FQRDAFLRIDMYAMGLVLWELASRCTA---ADGPVDE---YMLPFEEEIGQHPSLEDMQE 264
Query: 720 LVDPRLGDDYPIDSVRKMARLARAC 744
+V + D +K A +A C
Sbjct: 265 VVVHKKKRPVLRDYWQKHAGMAMLC 289
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 134/284 (47%), Gaps = 37/284 (13%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
+ ++ ++G G FG V + +G+ KM + S EF E + + + H LV+
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVK 67
Query: 547 LIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
G C E +++V EYI NG L +LR GK L S +++ D G+ ++ H
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG-LEPSQLLEMCYDVCEGMAFLESHQ-- 124
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
+IHRD+ N L+D++ KV+DFG+ + L + +SV T+ + PE Y +
Sbjct: 125 -FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF--PVKWSAPEVFHYFK 181
Query: 664 VSPKIDVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721
S K DV+AFG++++E+ S M + TN + VL+ RL
Sbjct: 182 YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV------------VLKVSQG----HRLY 225
Query: 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
P L D + ++ +C E P+ RP+ + ++ ++ L
Sbjct: 226 RPHLASD-------TIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 496 NKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV 552
++G G FG V+ G K AIK K + + FL E +++ + H LV+L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 553 EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDI 612
E +++V EY+ G+L L+ L + +A A G+ YI YIHRD+
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDL 131
Query: 613 KPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYA 672
+ ANIL+ K+ADFGLA+L E + + PE A YG + K DV++
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 673 FGVVLYELIS 682
FG++L EL++
Sbjct: 192 FGILLTELVT 201
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE------KAAIKKMDMQASKEFLAELKVLTHVHHLN 543
D +G +IG+G FG VF LR + K+ + + +FL E ++L H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 544 LVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
+VRLIG C + +++V E ++ G+ LR G L +Q+ D+A G+EY+
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQMVGDAAAGMEYLESK 232
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG--SASVHTRLVGTFGYMPPEYAQ 660
IHRD+ N L+ + K++DFG+++ G +AS R V + PE
Sbjct: 233 CC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV-PVKWTAPEALN 288
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
YG S + DV++FG++L+E S
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 14/202 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE------KAAIKKMDMQASKEFLAELKVLTHVHHLN 543
D +G +IG+G FG VF LR + K+ + + +FL E ++L H N
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 544 LVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
+VRLIG C + +++V E ++ G+ LR G L +Q+ D+A G+EY+
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQMVGDAAAGMEYLESK 232
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG--SASVHTRLVGTFGYMPPEYAQ 660
IHRD+ N L+ + K++DFG+++ G +AS R V + PE
Sbjct: 233 CC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV-PVKWTAPEALN 288
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
YG S + DV++FG++L+E S
Sbjct: 289 YGRYSSESDVWSFGILLWETFS 310
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 41/289 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKAAIKKMDMQASKE--FLAELKVLTHVHHLNLVR 546
++ + +IG G FG V L +K AIK + A E F+ E +V+ + H LV+
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C+E + + LV+E++E+G L+ +LR + + + + LD G+ Y+ E +V
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEASV- 124
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
IHRD+ N L+ +N KV+DFG+ + L + ++S T+ + PE +
Sbjct: 125 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSR 180
Query: 664 VSPKIDVYAFGVVLYELISAMEAVV--KTNETITE--STGLVALFEEVLRQPDPREDLQR 719
S K DV++FGV+++E+ S + ++N + E STG R
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------------------R 222
Query: 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768
L PRL + + ++ C +E P+ RP+ ++ L +++S
Sbjct: 223 LYKPRLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 41/289 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKAAIKKMDMQASKE--FLAELKVLTHVHHLNLVR 546
++ + +IG G FG V L +K AIK + A E F+ E +V+ + H LV+
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C+E + + LV+E++E+G L+ +LR + + + + LD G+ Y+ E V
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEACV- 124
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
IHRD+ N L+ +N KV+DFG+ + L + ++S T+ + PE +
Sbjct: 125 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSR 180
Query: 664 VSPKIDVYAFGVVLYELISAMEAVV--KTNETITE--STGLVALFEEVLRQPDPREDLQR 719
S K DV++FGV+++E+ S + ++N + E STG R
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------------------R 222
Query: 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768
L PRL + + ++ C +E P+ RP+ ++ L ++ S
Sbjct: 223 LYKPRLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 41/289 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKAAIKKMDMQASKE--FLAELKVLTHVHHLNLVR 546
++ + +IG G FG V L +K AIK + A E F+ E +V+ + H LV+
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C+E + + LV+E++E+G L+ +LR + + + + LD G+ Y+ E V
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEACV- 127
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
IHRD+ N L+ +N KV+DFG+ + L + ++S T+ + PE +
Sbjct: 128 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSR 183
Query: 664 VSPKIDVYAFGVVLYELISAMEAVV--KTNETITE--STGLVALFEEVLRQPDPREDLQR 719
S K DV++FGV+++E+ S + ++N + E STG R
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------------------R 225
Query: 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768
L PRL + + ++ C +E P+ RP+ ++ L ++ S
Sbjct: 226 LYKPRLASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
D + ++G G FG V Y + RG+ KM + S EF+ E KV+ ++ H LV+
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C + +F++ EY+ NG L +LR + +++ D +EY+
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 140
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
++HRD+ N L++ KV+DFGL++ L + ++SV ++ + PPE Y +
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF--PVRWSPPEVLMYSK 197
Query: 664 VSPKIDVYAFGVVLYELIS 682
S K D++AFGV+++E+ S
Sbjct: 198 FSSKSDIWAFGVLMWEIYS 216
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 41/289 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKAAIKKMDMQASKE--FLAELKVLTHVHHLNLVR 546
++ + +IG G FG V L +K AIK + A E F+ E +V+ + H LV+
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C+E + + LV+E++E+G L+ +LR + + + + LD G+ Y+ E V
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEACV- 122
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
IHRD+ N L+ +N KV+DFG+ + L + ++S T+ + PE +
Sbjct: 123 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSR 178
Query: 664 VSPKIDVYAFGVVLYELISAMEAVV--KTNETITE--STGLVALFEEVLRQPDPREDLQR 719
S K DV++FGV+++E+ S + ++N + E STG R
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------------------R 220
Query: 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768
L PRL + + ++ C +E P+ RP+ ++ L ++ S
Sbjct: 221 LYKPRLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 28/218 (12%)
Query: 490 NDFSMGNKIGQGGFGAVFYAE---LRGEK-------AAIKKMDMQASKEFLAELKVLTHV 539
D + ++G+G FG VF AE L E+ A+K+ A ++F E ++LT +
Sbjct: 12 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 71
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDT-------------LTWSAR 585
H ++VR G C EG L +V+EY+ +G+LN+ LR G D L
Sbjct: 72 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 131
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVH 644
+ +A A G+ Y+ ++HRD+ N L+ + K+ DFG+++ + V
Sbjct: 132 LAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
R + +MPPE Y + + + DV++FGVVL+E+ +
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 28/218 (12%)
Query: 490 NDFSMGNKIGQGGFGAVFYAE---LRGEK-------AAIKKMDMQASKEFLAELKVLTHV 539
D + ++G+G FG VF AE L E+ A+K+ A ++F E ++LT +
Sbjct: 18 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 77
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDT-------------LTWSAR 585
H ++VR G C EG L +V+EY+ +G+LN+ LR G D L
Sbjct: 78 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 137
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVH 644
+ +A A G+ Y+ ++HRD+ N L+ + K+ DFG+++ + V
Sbjct: 138 LAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
R + +MPPE Y + + + DV++FGVVL+E+ +
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 49/304 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAE---LRGEK-------AAIKKMDMQASKEFLAELKVLTHV 539
D + ++G+G FG VF AE L E+ A+K+ A ++F E ++LT +
Sbjct: 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML 100
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDT-------------LTWSAR 585
H ++VR G C EG L +V+EY+ +G+LN+ LR G D L
Sbjct: 101 QHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQL 160
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVH 644
+ +A A G+ Y+ ++HRD+ N L+ + K+ DFG+++ + V
Sbjct: 161 LAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217
Query: 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALF 704
R + +MPPE Y + + + DV++FGVVL+E+ + + TE+ +
Sbjct: 218 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN-TEAIDCITQG 276
Query: 705 EEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764
E+ R P ++ + R C Q PQ R S++ + L
Sbjct: 277 RELER--------------------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQA 316
Query: 765 LSSS 768
L+ +
Sbjct: 317 LAQA 320
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
D + ++G G FG V Y + RG+ KM + S EF+ E KV+ ++ H LV+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C + +F++ EY+ NG L +LR + +++ D +EY+
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 120
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
++HRD+ N L++ KV+DFGL++ L + ++SV ++ + PPE Y +
Sbjct: 121 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSK 177
Query: 664 VSPKIDVYAFGVVLYELIS 682
S K D++AFGV+++E+ S
Sbjct: 178 FSSKSDIWAFGVLMWEIYS 196
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
D + ++G G FG V Y + RG+ KM + S EF+ E KV+ ++ H LV+
Sbjct: 8 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C + +F++ EY+ NG L +LR + +++ D +EY+
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 124
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
++HRD+ N L++ KV+DFGL++ L + ++SV ++ + PPE Y +
Sbjct: 125 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSK 181
Query: 664 VSPKIDVYAFGVVLYELIS 682
S K D++AFGV+++E+ S
Sbjct: 182 FSSKSDIWAFGVLMWEIYS 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
D + ++G G FG V Y + RG+ KM + S EF+ E KV+ ++ H LV+
Sbjct: 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C + +F++ EY+ NG L +LR + +++ D +EY+
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 140
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
++HRD+ N L++ KV+DFGL++ L + ++SV ++ + PPE Y +
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSK 197
Query: 664 VSPKIDVYAFGVVLYELIS 682
S K D++AFGV+++E+ S
Sbjct: 198 FSSKSDIWAFGVLMWEIYS 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
D + ++G G FG V Y + RG+ KM + S EF+ E KV+ ++ H LV+
Sbjct: 15 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C + +F++ EY+ NG L +LR + +++ D +EY+
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 131
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
++HRD+ N L++ KV+DFGL++ L + ++SV ++ + PPE Y +
Sbjct: 132 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSK 188
Query: 664 VSPKIDVYAFGVVLYELIS 682
S K D++AFGV+++E+ S
Sbjct: 189 FSSKSDIWAFGVLMWEIYS 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 12/199 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
D + ++G G FG V Y + RG+ KM + S EF+ E KV+ ++ H LV+
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C + +F++ EY+ NG L +LR + +++ D +EY+
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 125
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
++HRD+ N L++ KV+DFGL++ L + ++SV ++ + PPE Y +
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF--PVRWSPPEVLMYSK 182
Query: 664 VSPKIDVYAFGVVLYELIS 682
S K D++AFGV+++E+ S
Sbjct: 183 FSSKSDIWAFGVLMWEIYS 201
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 139/289 (48%), Gaps = 41/289 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKAAIK--KMDMQASKEFLAELKVLTHVHHLNLVR 546
++ + +IG G FG V L +K AIK K + +F+ E +V+ + H LV+
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C+E + + LV+E++E+G L+ +LR + + + + LD G+ Y+ E V
Sbjct: 87 LYGVCLEQAPICLVFEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEACV- 144
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
IHRD+ N L+ +N KV+DFG+ + L + ++S T+ + PE +
Sbjct: 145 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSR 200
Query: 664 VSPKIDVYAFGVVLYELISAMEAVV--KTNETITE--STGLVALFEEVLRQPDPREDLQR 719
S K DV++FGV+++E+ S + ++N + E STG R
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------------------R 242
Query: 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768
L PRL + + ++ C +E P+ RP+ ++ L ++ S
Sbjct: 243 LYKPRLASTH-------VYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 49/227 (21%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE-----FLAEL 533
YE+LAK IGQG FG VF A R G+K A+KK+ M+ KE L E+
Sbjct: 19 KYEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 68
Query: 534 KVLTHVHHLNLVRLIGYC---------VEGSLFLVYEYIEN---GNLNQHLRGSGKDTLT 581
K+L + H N+V LI C +GS++LV+++ E+ G L+ L K TL+
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLS 125
Query: 582 WSAR-MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640
R MQ+ L+ GL YIH + + +HRD+K AN+LI ++ K+ADFGLA+ +
Sbjct: 126 EIKRVMQMLLN---GLYYIHRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 641 ASVHTRL---VGTFGYMPPEY----AQYGEVSPKIDVYAFGVVLYEL 680
S R V T Y PPE YG P ID++ G ++ E+
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEM 223
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 41/289 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKAAIKKMDMQASKE--FLAELKVLTHVHHLNLVR 546
++ + +IG G FG V L +K AIK + A E F+ E +V+ + H LV+
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 67
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C+E + + LV E++E+G L+ +LR + + + + LD G+ Y+ E V
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEACV- 125
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
IHRD+ N L+ +N KV+DFG+ + L + ++S T+ + PE +
Sbjct: 126 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF--PVKWASPEVFSFSR 181
Query: 664 VSPKIDVYAFGVVLYELISAMEAVV--KTNETITE--STGLVALFEEVLRQPDPREDLQR 719
S K DV++FGV+++E+ S + ++N + E STG R
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF------------------R 223
Query: 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768
L PRL + + ++ C +E P+ RP+ ++ L ++ S
Sbjct: 224 LYKPRLASTH-------VYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 49/227 (21%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE-----FLAEL 533
YE+LAK IGQG FG VF A R G+K A+KK+ M+ KE L E+
Sbjct: 18 KYEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 67
Query: 534 KVLTHVHHLNLVRLIGYC---------VEGSLFLVYEYIEN---GNLNQHLRGSGKDTLT 581
K+L + H N+V LI C +GS++LV+++ E+ G L+ L K TL+
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLS 124
Query: 582 WSAR-MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640
R MQ+ L+ GL YIH + + +HRD+K AN+LI ++ K+ADFGLA+ +
Sbjct: 125 EIKRVMQMLLN---GLYYIHRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAK 178
Query: 641 ASVHTRL---VGTFGYMPPEY----AQYGEVSPKIDVYAFGVVLYEL 680
S R V T Y PPE YG P ID++ G ++ E+
Sbjct: 179 NSQPNRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEM 222
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 83/227 (36%), Positives = 118/227 (51%), Gaps = 49/227 (21%)
Query: 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE-----FLAEL 533
YE+LAK IGQG FG VF A R G+K A+KK+ M+ KE L E+
Sbjct: 19 KYEKLAK----------IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 68
Query: 534 KVLTHVHHLNLVRLIGYC---------VEGSLFLVYEYIEN---GNLNQHLRGSGKDTLT 581
K+L + H N+V LI C +GS++LV+++ E+ G L+ L K TL+
Sbjct: 69 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVL---VKFTLS 125
Query: 582 WSAR-MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640
R MQ+ L+ GL YIH + + +HRD+K AN+LI ++ K+ADFGLA+ +
Sbjct: 126 EIKRVMQMLLN---GLYYIHRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 641 ASVHTRL---VGTFGYMPPEY----AQYGEVSPKIDVYAFGVVLYEL 680
S R V T Y PPE YG P ID++ G ++ E+
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYG---PPIDLWGAGCIMAEM 223
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 149/317 (47%), Gaps = 50/317 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRL 547
M +IG+G +G V+ + RGEK A+K + E ++ V H N++
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGF 96
Query: 548 IGYCVEGS-----LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
I ++G+ L+L+ +Y ENG+L +L+ + TL + +++A S GL ++H
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 603 TV-----PVYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASV--HTRLVGTFGY 653
P HRD+K NIL+ KN +AD GLA +++ + +TR VGT Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR-VGTKRY 212
Query: 654 MPPEY------AQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFE-- 705
MPPE + + D+Y+FG++L+E+ A V S G+V ++
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCV---------SGGIVEEYQLP 261
Query: 706 -EVLRQPDPR-EDLQRLV-----DPRLGDDYPIDS-VRKMARLARACTQENPQLRPSMRA 757
L DP ED++ +V P + + D +R+M +L C NP R + A
Sbjct: 262 YHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR--LTA 319
Query: 758 IVVALMTLSSSSEDWDI 774
+ V TL+ SE DI
Sbjct: 320 LRVK-KTLAKMSESQDI 335
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 12/199 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
D + ++G G FG V Y + RG+ KM + S EF+ E KV+ ++ H LV+
Sbjct: 9 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L G C + +F++ EY+ NG L +LR + +++ D +EY+
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLR-EMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 125
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAK--LTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
++HRD+ N L++ KV+DFGL++ L + ++S ++ + PPE Y +
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF--PVRWSPPEVLMYSK 182
Query: 664 VSPKIDVYAFGVVLYELIS 682
S K D++AFGV+++E+ S
Sbjct: 183 FSSKSDIWAFGVLMWEIYS 201
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 30/244 (12%)
Query: 499 GQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTH--VHHLNLVRLI-----GYC 551
+G FG V+ A+L + A+K +Q + + +E ++ + + H NL++ I G
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSN 83
Query: 552 VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT-------- 603
+E L+L+ + + G+L +L+G + +TW+ +A +RGL Y+HE
Sbjct: 84 LEVELWLITAFHDKGSLTDYLKG---NIITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPEYAQYG 662
P HRD K N+L+ + A +ADFGLA E G T VGT YM PE +
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGA 200
Query: 663 -----EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717
+ +ID+YA G+VL+EL+S +A + + E + FEE + Q E+L
Sbjct: 201 INFQRDAFLRIDMYAMGLVLWELVSRCKA---ADGPVDE---YMLPFEEEIGQHPSLEEL 254
Query: 718 QRLV 721
Q +V
Sbjct: 255 QEVV 258
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAA--IKKMDM--QASKEFLAELKVLTHVHHLNLV 545
++ + +IG G FG V+ + G+ A +K +D + + F E+ VL H+N++
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL 95
Query: 546 RLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
+GY + +L +V ++ E +L +HL + + IA +A+G++Y+H +
Sbjct: 96 LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNI- 153
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT-RLVGTFGYMPPEYAQYGEV 664
IHRD+K NI + + K+ DFGLA + S S + G+ +M PE + +
Sbjct: 154 --IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 665 SP---KIDVYAFGVVLYELISA 683
+P + DVY++G+VLYEL++
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTG 233
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 39/211 (18%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIG 549
KIGQG FG VF A R G+K A+KK+ M+ KE L E+K+L + H N+V LI
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 550 YC---------VEGSLFLVYEYIEN---GNLNQHLRGSGKDTLTWSAR-MQIALDSARGL 596
C + S++LV+++ E+ G L+ L K TL+ R MQ+ L+ GL
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVMQMLLN---GL 138
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL---VGTFGY 653
YIH + + +HRD+K AN+LI ++ K+ADFGLA+ + S R V T Y
Sbjct: 139 YYIHRNKI---LHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 654 MPPEY----AQYGEVSPKIDVYAFGVVLYEL 680
PPE YG P ID++ G ++ E+
Sbjct: 196 RPPELLLGERDYG---PPIDLWGAGCIMAEM 223
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHVHH 541
DF +G +G+G FG V+ A R K A+K K ++ + + E+++ +H+ H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 542 LNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
N++RL GY + + ++L+ EY G + + L+ + +A L A L Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYCH 129
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
V IHRDIKP N+L+ N K+ADFG + +S T L GT Y+PPE +
Sbjct: 130 SKRV---IHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEMIE 183
Query: 661 YGEVSPKIDVYAFGVVLYELISAM 684
K+D+++ GV+ YE + M
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGM 207
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 143/299 (47%), Gaps = 49/299 (16%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEKA--AIKKMDMQAS----------KEFLAELKV 535
A N+ +IG+GGFG V L +K+ AIK + + S +EF E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 536 LTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+++++H N+V+L G + +V E++ G+L L + WS ++++ LD A G
Sbjct: 77 MSNLNHPNIVKLYG-LMHNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALG 134
Query: 596 LEYIHEHTVPVYIHRDIKPANIL---IDKN--FRAKVADFGLAKLTEVGSASVH--TRLV 648
+EY+ P+ +HRD++ NI +D+N AKVADFGL++ SVH + L+
Sbjct: 135 IEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ------QSVHSVSGLL 187
Query: 649 GTFGYMPPEY--AQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G F +M PE A+ + K D Y+F ++LY +++ + + + ++ EE
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EE 245
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
LR P + +D P ++ + C +P+ RP IV L L
Sbjct: 246 GLR-------------PTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIKKM-DMQASKE-----FLAELKVLTHVHH 541
+DF +G +G+G FG V+ A + K A+K + Q KE E+++ +H+ H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 542 LNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
N++R+ Y + ++L+ E+ G L + L+ G+ SA L A L Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL--ADALHYCH 132
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPEYA 659
E V IHRDIKP N+L+ K+ADFG + V + S+ R + GT Y+PPE
Sbjct: 133 ERKV---IHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMI 185
Query: 660 QYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT 695
+ K+D++ GV+ YE + M + T T
Sbjct: 186 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 221
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 19/216 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIKKM-DMQASKE-----FLAELKVLTHVHH 541
+DF +G +G+G FG V+ A + K A+K + Q KE E+++ +H+ H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 542 LNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
N++R+ Y + ++L+ E+ G L + L+ G+ SA L A L Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL--ADALHYCH 131
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPEYA 659
E V IHRDIKP N+L+ K+ADFG + V + S+ R + GT Y+PPE
Sbjct: 132 ERKV---IHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 660 QYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT 695
+ K+D++ GV+ YE + M + T T
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 124/262 (47%), Gaps = 35/262 (13%)
Query: 467 PGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKM 521
PG G + + +E S + K IG G G V Y LR G++ AIK +
Sbjct: 35 PGRAGRSFTREIEASRIHIEKI---------IGSGDSGEVCYGRLRVPGQRDVPVAIKAL 85
Query: 522 DM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRG-S 575
+ ++FL+E ++ H N++RL G G L +V EY+ENG+L+ LR
Sbjct: 86 KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD 145
Query: 576 GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635
G+ T+ M + + G+ Y+ + Y+HRD+ N+L+D N KV+DFGL+++
Sbjct: 146 GQFTIMQLVGMLRGVGA--GMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 636 TEVGSASVHTRLVGT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVV--KTN 691
E + +T G + PE + S DV++FGVV++E+++ E TN
Sbjct: 201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
Query: 692 ETITESTGLVALFEEVLRQPDP 713
+ S EE R P P
Sbjct: 261 RDVISSV------EEGYRLPAP 276
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-------QASKEFLAELKVLTHVHHLN 543
+ ++ IG GGFG V+ A G++ A+K Q + E K+ + H N
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN 67
Query: 544 LVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGS--GKDTLT-WSARMQIALDSARGLEYI 599
++ L G C+ E +L LV E+ G LN+ L G D L W+ ++ ARG+ Y+
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYL 121
Query: 600 HEHTVPVYIHRDIKPANILIDK--------NFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
H+ + IHRD+K +NILI + N K+ DFGLA+ + G +
Sbjct: 122 HDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH---RTTKMSAAGAY 178
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711
+M PE + S DV+++GV+L+EL++ E + + + + G+
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLTG-EVPFRGIDGLAVAYGVA---------- 227
Query: 712 DPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ +L P P A+L C +P RPS I+ L T+
Sbjct: 228 -----MNKLALP-----IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 35/262 (13%)
Query: 467 PGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKM 521
PG G + + +E S + K IG G G V Y LR G++ AIK +
Sbjct: 35 PGRAGRSFTREIEASRIHIEKI---------IGSGDSGEVCYGRLRVPGQRDVPVAIKAL 85
Query: 522 DM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRG-S 575
+ ++FL+E ++ H N++RL G G L +V EY+ENG+L+ LR
Sbjct: 86 KAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD 145
Query: 576 GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635
G+ T+ M + + G+ Y+ + Y+HRD+ N+L+D N KV+DFGL+++
Sbjct: 146 GQFTIMQLVGMLRGVGA--GMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
Query: 636 TEVGSASVHTRLVGT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVV--KTN 691
E + T G + PE + S DV++FGVV++E+++ E TN
Sbjct: 201 LEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN 260
Query: 692 ETITESTGLVALFEEVLRQPDP 713
+ S EE R P P
Sbjct: 261 RDVISSV------EEGYRLPAP 276
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKM---DMQASKEFLAELKVLTHVHHLNL 544
+D G +G+G FG R GE +K++ D + + FL E+KV+ + H N+
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNV 69
Query: 545 VRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
++ IG + L + EYI+ G L ++ S WS R+ A D A G+ Y+H
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRGIIK-SMDSQYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLT-----------EVGSASVHTR--LVGT 650
+ IHRD+ N L+ +N VADFGLA+L + R +VG
Sbjct: 129 I---IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 651 FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEA 686
+M PE K+DV++FG+VL E+I + A
Sbjct: 186 PYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA 221
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 492 FSMGNKIGQGGFGAVFYAEL-RGEKAAIKKMD--MQASKEFLAELKVLTHVHHLNLVRLI 548
+ K+G G FG V+ A + K A+K M + + FLAE V+ + H LV+L
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 76
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ E++ G+L L+ + + A G+ +I + YI
Sbjct: 77 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 133
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ + K+ADFGLA++ E + + PE +G + K
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 669 DVYAFGVVLYELIS 682
DV++FG++L E+++
Sbjct: 194 DVWSFGILLMEIVT 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL--ANAL 126
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 127 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVH---APSSRRTTLCGTLDYLPP 180
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFL 205
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 15/207 (7%)
Query: 485 LAKATND-FSMGNKIGQGGFGAVFYAE--LRGEKAAIK------KMDMQASKEFLAELKV 535
+ K N+ + + +K+G GG V+ AE + K AIK + + K F E+
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN 64
Query: 536 LTHVHHLNLVRLIGYCVEGSLF-LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
+ + H N+V +I E + LV EYIE L++++ G L+ +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILD 122
Query: 595 GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
G+++ H+ + +HRDIKP NILID N K+ DFG+AK S + ++GT Y
Sbjct: 123 GIKHAHDMRI---VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYF 179
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE A+ D+Y+ G+VLYE++
Sbjct: 180 SPEQAKGEATDECTDIYSIGIVLYEML 206
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 147
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 148 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 201
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFL 226
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 17/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHVHH 541
DF +G +G+G FG V+ A R K A+K K ++ + + E+++ +H+ H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 542 LNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
N++RL GY + + ++L+ EY G + + L+ + +A L A L Y H
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL--ANALSYCH 129
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
V IHRDIKP N+L+ N K+ADFG + +S L GT Y+PPE +
Sbjct: 130 SKRV---IHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLCGTLDYLPPEMIE 183
Query: 661 YGEVSPKIDVYAFGVVLYELISAM 684
K+D+++ GV+ YE + M
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGM 207
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 96/194 (49%), Gaps = 6/194 (3%)
Query: 492 FSMGNKIGQGGFGAVFYAEL-RGEKAAIKKMD--MQASKEFLAELKVLTHVHHLNLVRLI 548
+ K+G G FG V+ A + K A+K M + + FLAE V+ + H LV+L
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 249
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ E++ G+L L+ + + A G+ +I + YI
Sbjct: 250 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 306
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ + K+ADFGLA++ E + + PE +G + K
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 669 DVYAFGVVLYELIS 682
DV++FG++L E+++
Sbjct: 367 DVWSFGILLMEIVT 380
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 142/299 (47%), Gaps = 49/299 (16%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEKA--AIKKMDMQAS----------KEFLAELKV 535
A N+ +IG+GGFG V L +K+ AIK + + S +EF E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 536 LTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+++++H N+V+L G + +V E++ G+L L + WS ++++ LD A G
Sbjct: 77 MSNLNHPNIVKLYG-LMHNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALG 134
Query: 596 LEYIHEHTVPVYIHRDIKPANIL---IDKN--FRAKVADFGLAKLTEVGSASVH--TRLV 648
+EY+ P+ +HRD++ NI +D+N AKVADFG ++ SVH + L+
Sbjct: 135 IEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ------QSVHSVSGLL 187
Query: 649 GTFGYMPPEY--AQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G F +M PE A+ + K D Y+F ++LY +++ + + + ++ EE
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EE 245
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
LR P + +D P ++ + C +P+ RP IV L L
Sbjct: 246 GLR-------------PTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 121
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 122 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTELCGTLDYLPP 175
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLI 548
DF IG GGFG VF A+ R G+ IK++ K E+K L + H+N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-EREVKALAKLDHVNIVHYN 70
Query: 549 GYCVEG------------------SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIAL 590
G C +G LF+ E+ + G L Q + + L +++
Sbjct: 71 G-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129
Query: 591 DSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGT 650
+G++YIH + I+RD+KP+NI + + K+ DFGL +T + + R GT
Sbjct: 130 QITKGVDYIHSKKL---INRDLKPSNIFLVDTKQVKIGDFGL--VTSLKNDGKRXRSKGT 184
Query: 651 FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
YM PE + ++D+YA G++L EL+ + +T++ T+
Sbjct: 185 LRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD 230
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 115/217 (52%), Gaps = 30/217 (13%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEKA--AIKKMDMQAS----------KEFLAELKV 535
A N+ +IG+GGFG V L +K+ AIK + + S +EF E+ +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 536 LTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+++++H N+V+L G + +V E++ G+L L + WS ++++ LD A G
Sbjct: 77 MSNLNHPNIVKLYG-LMHNPPRMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALG 134
Query: 596 LEYIHEHTVPVYIHRDIKPANIL---IDKN--FRAKVADFGLAKLTEVGSASVH--TRLV 648
+EY+ P+ +HRD++ NI +D+N AKVADF L++ SVH + L+
Sbjct: 135 IEYMQNQNPPI-VHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ------QSVHSVSGLL 187
Query: 649 GTFGYMPPEY--AQYGEVSPKIDVYAFGVVLYELISA 683
G F +M PE A+ + K D Y+F ++LY +++
Sbjct: 188 GNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 80
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 138
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 139 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 192
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFL 217
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 40/239 (16%)
Query: 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLI 548
DF IG GGFG VF A+ R G+ I+++ K E+K L + H+N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA-EREVKALAKLDHVNIVHYN 71
Query: 549 GYCVEG-------------------------------SLFLVYEYIENGNLNQHLRGSGK 577
G C +G LF+ E+ + G L Q +
Sbjct: 72 G-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 578 DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637
+ L +++ +G++YIH + IHRD+KP+NI + + K+ DFGL +T
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKL---IHRDLKPSNIFLVDTKQVKIGDFGL--VTS 185
Query: 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
+ + TR GT YM PE + ++D+YA G++L EL+ + +T++ T+
Sbjct: 186 LKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD 244
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 126
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 127 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVH---APSSRRTTLCGTLDYLPP 180
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFL 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 121
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 122 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 175
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 152
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQK 212
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 213 FTTKSDVWSFGVLLWELMT 231
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 124
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 125 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 178
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 126
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 127 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 180
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFL 205
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 122
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 123 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTDLCGTLDYLPP 176
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFL 201
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 123
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PPE
Sbjct: 124 CHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPPEM 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 63
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 121
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 122 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTDLCGTLDYLPP 175
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 126
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 127 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGW---SVHAPSSRRTDLCGTLDYLPP 180
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFL 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 122
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PPE
Sbjct: 123 CHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 176
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFL 199
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 37 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 152
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGLA++ E + +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRG 209
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 253
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 254 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 120
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PPE
Sbjct: 121 CHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 174
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFL 197
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 123
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PPE
Sbjct: 124 CHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTXLCGTLDYLPPEM 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 54/236 (22%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKM------DMQASKEFLAELKVL 536
N+ IG+G FG VF A G A+K + DMQA +F E ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQA--DFQREAALM 104
Query: 537 THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--------------------- 574
+ N+V+L+G C G + L++EY+ G+LN+ LR
Sbjct: 105 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164
Query: 575 -SGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633
G L+ + ++ IA A G+ Y+ E ++HRD+ N L+ +N K+ADFGL+
Sbjct: 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLS 221
Query: 634 K-------LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G+ ++ R +MPPE Y + + DV+A+GVVL+E+ S
Sbjct: 222 RNIYSADYYKADGNDAIPIR------WMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 19/216 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIKKM-DMQASKE-----FLAELKVLTHVHH 541
+DF + +G+G FG V+ A + K A+K + Q KE E+++ +H+ H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 542 LNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
N++R+ Y + ++L+ E+ G L + L+ G+ SA L A L Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL--ADALHYCH 131
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPEYA 659
E V IHRDIKP N+L+ K+ADFG + V + S+ R + GT Y+PPE
Sbjct: 132 ERKV---IHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 660 QYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT 695
+ K+D++ GV+ YE + M + T T
Sbjct: 185 EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET 220
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 122
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 123 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSC---HAPSSRRTTLSGTLDYLPP 176
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFL 201
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 126
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PPE
Sbjct: 127 CHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPPEM 180
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 171
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 231
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 232 FTTKSDVWSFGVLLWELMT 250
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 67
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 125
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S T L GT Y+PP
Sbjct: 126 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRTTLCGTLDYLPP 179
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFL 204
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 68
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL--ANAL 126
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PP
Sbjct: 127 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLXGTLDYLPP 180
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFL 205
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 172
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 232
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 233 FTTKSDVWSFGVLLWELMT 251
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 8 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 123
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 224
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 225 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 104/203 (51%), Gaps = 23/203 (11%)
Query: 492 FSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKEF---------LAELKVLTHVH 540
+ +G+ +G G FG V EL G K A+K ++ Q + + LK+ H H
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 541 HLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
+ L ++I +F+V EY+ G L ++ +G+ S R+ + S G++Y H
Sbjct: 78 IIKLYQVIS--TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--GVDYCH 133
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H V +HRD+KP N+L+D + AK+ADFGL+ + G + G+ Y PE
Sbjct: 134 RHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS--CGSPNYAAPEVIS 188
Query: 661 YGEV--SPKIDVYAFGVVLYELI 681
G + P++D+++ GV+LY L+
Sbjct: 189 -GRLYAGPEVDIWSSGVILYALL 210
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 145
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 205
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 206 FTTKSDVWSFGVLLWELMT 224
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 89
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 147
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PP
Sbjct: 148 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPP 201
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFL 226
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 153
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 131/276 (47%), Gaps = 39/276 (14%)
Query: 498 IGQGGFGAVFYAELRGE-----KAAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ E + + AIK + +MQ + FL E ++ ++H N++ LI
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G + EG ++ Y+ +G+L Q +R ++ T + L ARG+EY+ E
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP-TVKDLISFGLQVARGMEYLAEQK--- 144
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLT---EVGSASVHTRLVGTFGYMPPEYAQYGE 663
++HRD+ N ++D++F KVADFGLA+ E S H + E Q
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYR 204
Query: 664 VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723
+ K DV++FGV+L+EL++ + + L + R P P
Sbjct: 205 FTTKSDVWSFGVLLWELLTRGAPPYRH----IDPFDLTHFLAQGRRLPQP---------- 250
Query: 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+Y DS + ++ + C + +P +RP+ R +V
Sbjct: 251 ----EYCPDS---LYQVMQQCWEADPAVRPTFRVLV 279
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 37 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 152
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 253
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 254 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 150
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 210
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 211 FTTKSDVWSFGVLLWELMT 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 25 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 81
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 82 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 140
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 141 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 197
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 198 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 241
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 242 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTL--------TW 582
E V+ + ++VRL+G +G ++ E + G+L +LR + +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 123 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 180 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 236
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ +L +PD D+ + L R C Q NP++RPS I+
Sbjct: 237 -FVMEGGLLDKPDNCPDM-------------------LLELMRMCWQYNPKMRPSFLEII 276
Query: 760 VAL 762
++
Sbjct: 277 SSI 279
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 152
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 212
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 213 FTTKSDVWSFGVLLWELMT 231
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 37 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 152
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 253
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 254 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 37 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 152
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 253
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 254 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTL--------TW 582
E V+ + ++VRL+G +G ++ E + G+L +LR + +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 132 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 245
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ +L +PD D+ + L R C Q NP++RPS I+
Sbjct: 246 -FVMEGGLLDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFLEII 285
Query: 760 VAL 762
++
Sbjct: 286 SSI 288
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 37 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 152
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 253
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 254 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 153
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 35 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 91
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 92 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 150
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 151 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 207
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 208 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 251
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 252 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 148
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 208
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 209 FTTKSDVWSFGVLLWELMT 227
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 37 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 152
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL ++ E + +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRG 209
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 253
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 254 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++Y+
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKYLASKK--- 151
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 211
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 212 FTTKSDVWSFGVLLWELMT 230
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 123
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+A+FG + +S T L GT Y+PP
Sbjct: 124 SYCHSKRV---IHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLPP 177
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFL 202
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 65
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 123
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PP
Sbjct: 124 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLCGTLDYLPP 177
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFL 202
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 14/206 (6%)
Query: 485 LAKATNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQAS------KEFLAELKVL 536
+ + DF +GN +G+G F V+ AE G + AIK +D +A + E+K+
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 537 THVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H +++ L Y + + ++LV E NG +N++L+ K AR G
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITG 124
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
+ Y+H H + +HRD+ +N+L+ +N K+ADFGLA ++ H L GT Y+
Sbjct: 125 MLYLHSHGI---LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK-HYTLCGTPNYIS 180
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELI 681
PE A + DV++ G + Y L+
Sbjct: 181 PEIATRSAHGLESDVWSLGCMFYTLL 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 33/206 (16%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG 549
KIG+G +G VF R G+ AIKK D K L E+++L + H NLV L+
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 550 -YCVEGSLFLVYEYIEN---GNLNQHLRGSGK---DTLTWSARMQIALDSARGLEYIHEH 602
+ + L LV+EY ++ L+++ RG + ++TW + + + + H+H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHKH 121
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY---- 658
IHRD+KP NILI K+ K+ DFG A+L G + + V T Y PE
Sbjct: 122 NC---IHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRWYRSPELLVGD 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELISAM 684
QYG P +DV+A G V EL+S +
Sbjct: 178 TQYG---PPVDVWAIGCVFAELLSGV 200
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 124
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PP
Sbjct: 125 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRAALCGTLDYLPP 178
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++++
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKK--- 212
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 272
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 273 FTTKSDVWSFGVLLWELMT 291
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 133/301 (44%), Gaps = 48/301 (15%)
Query: 481 SYEELAKATNDFS---------MGNKIGQGGFGAVFYAEL-----RGEKAAIKKMDM--- 523
+YE+ +A + F+ + IG G FG V L R AIK + +
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 524 -QASKEFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG-SGKDTL 580
+ ++FL E ++ H N+V L G G + +V E++ENG L+ LR G+ T+
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640
M + A G+ Y+ + Y+HRD+ NIL++ N KV+DFGL+++ E
Sbjct: 145 IQLVGMLRGI--AAGMRYLADMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDP 199
Query: 641 ASVHTRLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
+V+T G + PE QY + + DV+++G+V++E++S E +
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----MSNQ 255
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
++ EE R P P+D + +L C Q+ RP I
Sbjct: 256 DVIKAIEEGYRLP-----------------APMDCPAGLHQLMLDCWQKERAERPKFEQI 298
Query: 759 V 759
V
Sbjct: 299 V 299
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 64
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 122
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PP
Sbjct: 123 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRDTLCGTLDYLPP 176
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFL 201
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++++
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKK--- 154
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 215 FTTKSDVWSFGVLLWELMT 233
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 123
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PPE
Sbjct: 124 CHSKKV---IHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGY----- 550
IG+G FG V+ + RGE+ A+K + + + E ++ V H N++ I
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 96
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV-----P 605
L+LV +Y E+G+L +L + T+T +++AL +A GL ++H V P
Sbjct: 97 GTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 153
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH---TRLVGTFGYMPPEY---- 658
HRD+K NIL+ KN +AD GLA + + ++ VGT YM PE
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 213
Query: 659 --AQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716
++ E + D+YA G+V +E I+ ++ +E + ++ V P E
Sbjct: 214 INMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQ-----LPYYDLVPSDPSVEEM 267
Query: 717 LQRLVDPRLGDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766
+ + + +L + P +++R MA++ R C N R + I L LS
Sbjct: 268 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 322
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 126
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+A+FG + +S T L GT Y+PPE
Sbjct: 127 CHSKRV---IHRDIKPENLLLGSAGELKIANFGWSV---HAPSSRRTTLCGTLDYLPPEM 180
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 34/222 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG------------KDTLTWS 583
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 584 ARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+ V
Sbjct: 149 HLIXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 644 H---TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
RL +M PE + + DV++FGV+L+E+ S
Sbjct: 206 RKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 136/295 (46%), Gaps = 35/295 (11%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGY----- 550
IG+G FG V+ + RGE+ A+K + + + E ++ V H N++ I
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 76
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV-----P 605
L+LV +Y E+G+L +L + T+T +++AL +A GL ++H V P
Sbjct: 77 GTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 133
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH---TRLVGTFGYMPPEY---- 658
HRD+K NIL+ KN +AD GLA + + ++ VGT YM PE
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 193
Query: 659 --AQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716
++ E + D+YA G+V +E I+ ++ +E + ++ V P E
Sbjct: 194 INMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQ-----LPYYDLVPSDPSVEEM 247
Query: 717 LQRLVDPRLGDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766
+ + + +L + P +++R MA++ R C N R + I L LS
Sbjct: 248 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 302
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 136/303 (44%), Gaps = 49/303 (16%)
Query: 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAELR----GE---KAAIKKMDMQASK----E 528
F +E + ++ ++GQG FG V+ R GE + A+K ++ AS E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 529 FLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--------SGKDT 579
FL E V+ ++VRL+G +G +V E + +G+L +LR G+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 580 LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEV 638
T +Q+A + A G+ Y++ ++HRD+ N ++ +F K+ DFG+ + + E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 183
Query: 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITE 696
+ + +M PE + G + D+++FGVVL+E+ S E + +NE + +
Sbjct: 184 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ L QPD + ++ L R C Q NP++RP+
Sbjct: 244 ----FVMDGGYLDQPD-------------------NCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 757 AIV 759
IV
Sbjct: 281 EIV 283
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 7/191 (3%)
Query: 496 NKIGQGGFGAVFYAELRGE-KAAIKKMD--MQASKEFLAELKVLTHVHHLNLVRLIGYCV 552
++G G FG V+ K A+K + + + FL E ++ + H LVRL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 553 -EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRD 611
E ++++ EY+ G+L L+ + + + A G+ YI YIHRD
Sbjct: 79 REEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRD 135
Query: 612 IKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVY 671
++ AN+L+ ++ K+ADFGLA++ E + + PE +G + K DV+
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 672 AFGVVLYELIS 682
+FG++LYE+++
Sbjct: 196 SFGILLYEIVT 206
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++++
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKK--- 151
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 211
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 212 FTTKSDVWSFGVLLWELMT 230
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 123
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PPE
Sbjct: 124 CHSKRV---IHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRAALCGTLDYLPPEM 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 35/295 (11%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGYCVEGS 555
IG+G FG V+ + RGE+ A+K + + + E ++ V H N++ I + +
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 109
Query: 556 -----LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV-----P 605
L+LV +Y E+G+L +L + T+T +++AL +A GL ++H V P
Sbjct: 110 GTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 166
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH---TRLVGTFGYMPPEY---- 658
HRD+K NIL+ KN +AD GLA + + ++ VGT YM PE
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 226
Query: 659 --AQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716
++ E + D+YA G+V +E I+ ++ +E + ++ V P E
Sbjct: 227 INMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQ-----LPYYDLVPSDPSVEEM 280
Query: 717 LQRLVDPRLGDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766
+ + + +L + P +++R MA++ R C N R + I L LS
Sbjct: 281 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 123
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PPE
Sbjct: 124 CHSKRV---IHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLCGTLDYLPPEM 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFL 200
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 35/297 (11%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGY----- 550
IG+G FG V+ + RGE+ A+K + + + E ++ V H N++ I
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 71
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV-----P 605
L+LV +Y E+G+L +L + T+T +++AL +A GL ++H V P
Sbjct: 72 GTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 128
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH---TRLVGTFGYMPPEY---- 658
HRD+K NIL+ KN +AD GLA + + ++ VGT YM PE
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 188
Query: 659 --AQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716
++ E + D+YA G+V +E I+ ++ +E + ++ V P E
Sbjct: 189 INMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQ-----LPYYDLVPSDPSVEEM 242
Query: 717 LQRLVDPRLGDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768
+ + + +L + P +++R MA++ R C N R + I L LS
Sbjct: 243 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 299
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 138/306 (45%), Gaps = 49/306 (16%)
Query: 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----E 528
F +E A +M ++GQG FG V+ +G + AIK ++ AS E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 529 FLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTL------- 580
FL E V+ + ++VRL+G +G ++ E + G+L +LR +
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 581 -TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEV 638
+ S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITE 696
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 183 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 242
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
L L +PD D+ + L R C Q NP++RPS
Sbjct: 243 FVMEGGL----LDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFL 279
Query: 757 AIVVAL 762
I+ ++
Sbjct: 280 EIISSI 285
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKK--- 153
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++++
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKK--- 154
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 215 FTTKSDVWSFGVLLWELMT 233
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 136/303 (44%), Gaps = 49/303 (16%)
Query: 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAELR----GE---KAAIKKMDMQASK----E 528
F +E + ++ ++GQG FG V+ R GE + A+K ++ AS E
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 529 FLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--------SGKDT 579
FL E V+ ++VRL+G +G +V E + +G+L +LR G+
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 580 LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEV 638
T +Q+A + A G+ Y++ ++HRD+ N ++ +F K+ DFG+ + + E
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXET 180
Query: 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITE 696
+ + +M PE + G + D+++FGVVL+E+ S E + +NE + +
Sbjct: 181 DXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 240
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ L QPD + ++ L R C Q NP++RP+
Sbjct: 241 ----FVMDGGYLDQPD-------------------NCPERVTDLMRMCWQFNPKMRPTFL 277
Query: 757 AIV 759
IV
Sbjct: 278 EIV 280
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++++
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKK--- 153
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 213
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 214 FTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 18/199 (9%)
Query: 498 IGQGGFGAVFYAEL---RGEK--AAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLI 548
IG+G FG V++ L G+K A+K + D+ +FL E ++ H N++ L+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 549 GYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G C+ EGS +V Y+++G+L +R + T + L A+G++++
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-TVKDLIGFGLQVAKGMKFLASKK--- 158
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTF--GYMPPEYAQYGE 663
++HRD+ N ++D+ F KVADFGLA+ + + SVH + +M E Q +
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 218
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ K DV++FGV+L+EL++
Sbjct: 219 FTTKSDVWSFGVLLWELMT 237
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK--AAIK---KMDMQAS---KEFLAELKVLTHV 539
A DF +G +G+G FG V+ A + K A+K K ++ + + E+++ +H+
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
H N++RL GY + + ++L+ EY G + + L+ K +A L A L Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANALSY 126
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PPE
Sbjct: 127 CHSKRV---IHRDIKPENLLLGSAGELKIADFG---WSVHAPSSRRXXLCGTLDYLPPEM 180
Query: 659 AQYGEVSPKIDVYAFGVVLYELI 681
+ K+D+++ GV+ YE +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 35/297 (11%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGY----- 550
IG+G FG V+ + RGE+ A+K + + + E ++ V H N++ I
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 73
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV-----P 605
L+LV +Y E+G+L +L + T+T +++AL +A GL ++H V P
Sbjct: 74 GTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 130
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH---TRLVGTFGYMPPEY---- 658
HRD+K NIL+ KN +AD GLA + + ++ VGT YM PE
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 190
Query: 659 --AQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716
++ E + D+YA G+V +E I+ ++ +E + ++ V P E
Sbjct: 191 INMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQ-----LPYYDLVPSDPSVEEM 244
Query: 717 LQRLVDPRLGDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768
+ + + +L + P +++R MA++ R C N R + I L LS
Sbjct: 245 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 301
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 35/223 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ ++G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG-------------KDTLTW 582
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 148 EHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDX 204
Query: 643 VH---TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
V RL +M PE + + DV++FGV+L+E+ S
Sbjct: 205 VRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 137/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 37 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V EY+ENG+L+ LR T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ-FTVIQLVGM 152
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + ++HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 153 LRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 253
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 254 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 485 LAKATNDFSMGNKIGQGGFGAVFYA-ELR--GEKAAIKKMDMQASKE-----FLAELKVL 536
L +A + +IG+G +G VF A +L+ G A+K++ +Q +E + E+ VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 537 THVH---HLNLVRLIGYCV------EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQ 587
H+ H N+VRL C E L LV+E+++ +L +L + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 588 IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL 647
+ RGL+++H H V +HRD+KP NIL+ + + K+ADFGLA++ A T +
Sbjct: 125 MMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSV 179
Query: 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYEL 680
V T Y PE + +D+++ G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 35/297 (11%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGY----- 550
IG+G FG V+ + RGE+ A+K + + + E ++ V H N++ I
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN 70
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV-----P 605
L+LV +Y E+G+L +L + T+T +++AL +A GL ++H V P
Sbjct: 71 GTWTQLWLVSDYHEHGSLFDYL---NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP 127
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH---TRLVGTFGYMPPEY---- 658
HRD+K NIL+ KN +AD GLA + + ++ VGT YM PE
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS 187
Query: 659 --AQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716
++ E + D+YA G+V +E I+ ++ +E + ++ V P E
Sbjct: 188 INMKHFESFKRADIYAMGLVFWE-IARRCSIGGIHEDYQ-----LPYYDLVPSDPSVEEM 241
Query: 717 LQRLVDPRLGDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768
+ + + +L + P +++R MA++ R C N R + I L LS
Sbjct: 242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 21/205 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK----------AAIKKMDMQASKEFLAELKVLT 537
A DF +G +G+G FG V+ A + K A ++K ++ + E+++ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQS 66
Query: 538 HVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
H+ H N++RL GY + + ++L+ EY G + + L+ K +A L A L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL--ANAL 124
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y H V IHRDIKP N+L+ K+ADFG + +S L GT Y+PP
Sbjct: 125 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSV---HAPSSRRDDLCGTLDYLPP 178
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + K+D+++ GV+ YE +
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFL 203
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTL--------TW 582
E V+ + ++VRL+G +G ++ E + G+L +LR + +
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 132 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 189 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 245
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ +L +PD D+ + L R C Q NP++RPS I+
Sbjct: 246 -FVMEGGLLDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFLEII 285
Query: 760 VAL 762
++
Sbjct: 286 SSI 288
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 147/325 (45%), Gaps = 59/325 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 212 XXKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 261
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 262 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 759 VVAL---MTLSSSSEDWDIGSFYEN 780
V L +TL+++ E D+ E
Sbjct: 310 VEDLDRILTLTTNEEYLDLSQPLEQ 334
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 147/325 (45%), Gaps = 59/325 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGS--------------GKDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 212 XXKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 261
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 262 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 759 VVAL---MTLSSSSEDWDIGSFYEN 780
V L +TL+++ E D+ E
Sbjct: 310 VEDLDRILTLTTNEEYLDLSQPLEQ 334
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 36/224 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG--------------KDTLT 581
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 203
Query: 642 SVH---TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
V RL +M PE + + DV++FGV+L+E+ S
Sbjct: 204 XVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTL--------TW 582
E V+ + ++VRL+G +G ++ E + G+L +LR + +
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 160 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 217 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 273
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ +L +PD D+ + L R C Q NP++RPS I+
Sbjct: 274 -FVMEGGLLDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFLEII 313
Query: 760 VAL 762
++
Sbjct: 314 SSI 316
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGSLFLV-YEYIENGNLNQHLRGSGKDTL--------TW 582
E V+ + ++VRL+G +G LV E + G+L +LR + +
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 138 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
L L +PD D+ + L R C Q NP++RPS I+
Sbjct: 255 EGGL----LDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFLEII 291
Query: 760 VAL 762
++
Sbjct: 292 SSI 294
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTL--------TW 582
E V+ + ++VRL+G +G ++ E + G+L +LR + +
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 131 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 244
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ +L +PD D+ + L R C Q NP++RPS I+
Sbjct: 245 -FVMEGGLLDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFLEII 284
Query: 760 VAL 762
++
Sbjct: 285 SSI 287
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTL--------TW 582
E V+ + ++VRL+G +G ++ E + G+L +LR + +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 125 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 238
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ +L +PD D+ + L R C Q NP++RPS I+
Sbjct: 239 -FVMEGGLLDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFLEII 278
Query: 760 VAL 762
++
Sbjct: 279 SSI 281
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 485 LAKATNDFSMGNKIGQGGFGAVFYA-ELR--GEKAAIKKMDMQASKE-----FLAELKVL 536
L +A + +IG+G +G VF A +L+ G A+K++ +Q +E + E+ VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 537 THVH---HLNLVRLIGYCV------EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQ 587
H+ H N+VRL C E L LV+E+++ +L +L + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 588 IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL 647
+ RGL+++H H V +HRD+KP NIL+ + + K+ADFGLA++ A T +
Sbjct: 125 MMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSV 179
Query: 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYEL 680
V T Y PE + +D+++ G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 40/224 (17%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ ++G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG----------KDTLTWSAR 585
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-------LTEV 638
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 147 IXYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
G A + + +M PE + + DV++FGV+L+E+ S
Sbjct: 204 GDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTL--------TW 582
E V+ + ++VRL+G +G ++ E + G+L +LR + +
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 131 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 188 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 244
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ +L +PD D+ + L R C Q NP++RPS I+
Sbjct: 245 -FVMEGGLLDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFLEII 284
Query: 760 VAL 762
++
Sbjct: 285 SSI 287
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 36/224 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG--------------KDTLT 581
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 642 SVH---TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
V RL +M PE + + DV++FGV+L+E+ S
Sbjct: 195 XVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGSLFLV-YEYIENGNLNQHLRG-----SGKDTL---TW 582
E V+ + ++VRL+G +G LV E + G+L +LR + L +
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 138 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 195 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
L L +PD D+ + L R C Q NP++RPS I+
Sbjct: 255 EGGL----LDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFLEII 291
Query: 760 VAL 762
++
Sbjct: 292 SSI 294
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG-----SGKDTL---TW 582
E V+ + ++VRL+G +G ++ E + G+L +LR + L +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N ++ ++F K+ DFG+ + + E
Sbjct: 128 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 185 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 241
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ +L +PD D+ + L R C Q NP++RPS I+
Sbjct: 242 -FVMEGGLLDKPDNCPDM-------------------LFELMRMCWQYNPKMRPSFLEII 281
Query: 760 VAL 762
++
Sbjct: 282 SSI 284
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 485 LAKATNDFSMGNKIGQGGFGAVFYA-ELR--GEKAAIKKMDMQASKE-----FLAELKVL 536
L +A + +IG+G +G VF A +L+ G A+K++ +Q +E + E+ VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 537 THVH---HLNLVRLIGYCV------EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQ 587
H+ H N+VRL C E L LV+E+++ +L +L + +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 588 IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL 647
+ RGL+++H H V +HRD+KP NIL+ + + K+ADFGLA++ A T +
Sbjct: 125 MMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL--TSV 179
Query: 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYEL 680
V T Y PE + +D+++ G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 40/224 (17%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ ++G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG----------KDTLTWSAR 585
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-------LTEV 638
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 147 ICYSFQVAKGMEFLASRKX---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
G A + + +M PE + + DV++FGV+L+E+ S
Sbjct: 204 GDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 36/224 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG--------------KDTLT 581
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIXKDPD 194
Query: 642 SVH---TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
V RL +M PE + + DV++FGV+L+E+ S
Sbjct: 195 XVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 36/224 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG--------------KDTLT 581
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 642 SVH---TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
V RL +M PE + + DV++FGV+L+E+ S
Sbjct: 204 XVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELR----GE---KAAIKKMDMQASK----EFLA 531
+E + ++ ++GQG FG V+ R GE + A+K ++ AS EFL
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--------SGKDTLTW 582
E V+ ++VRL+G +G +V E + +G+L +LR G+ T
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
+Q+A + A G+ Y++ ++HRD+ N ++ +F K+ DFG+ + + E
Sbjct: 130 QEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + D+++FGVVL+E+ S E + +NE + +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--- 243
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ L QPD + ++ L R C Q NP +RP+ IV
Sbjct: 244 -FVMDGGYLDQPD-------------------NCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASKE----FLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++E ++E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 212 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 261
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 262 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 310 VEDLDRILTLTTNEE 324
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 8 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 64
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V E +ENG+L+ LR T + +
Sbjct: 65 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGM 123
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 180
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 181 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 224
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 225 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 146/311 (46%), Gaps = 58/311 (18%)
Query: 480 FSYEELAKATNDFS---------MGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM-- 523
F++E+ +A +F+ + IG G FG V L+ G++ AIK +
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 524 --QASKEFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLR-GSGKDT 579
+ ++FL+E ++ H N++ L G + + + ++ E++ENG+L+ LR G+ T
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 580 LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639
+ M + A G++Y+ + Y+HRD+ NIL++ N KV+DFGL++ E
Sbjct: 134 VIQLVGMLRGI--AAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 640 SAS-VHTRLVGTFGYMP-----PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVV--KTN 691
++ +T +G G +P PE QY + + DV+++G+V++E++S E TN
Sbjct: 189 TSDPTYTSALG--GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 246
Query: 692 ETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQL 751
+ + + E+ R P P+D + +L C Q++
Sbjct: 247 QDVINA------IEQDYRLPP-----------------PMDCPSALHQLMLDCWQKDRNH 283
Query: 752 RPSMRAIVVAL 762
RP IV L
Sbjct: 284 RPKFGQIVNTL 294
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 136/303 (44%), Gaps = 49/303 (16%)
Query: 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAELR----GE---KAAIKKMDMQASK----E 528
F +E + ++ ++GQG FG V+ R GE + A+K ++ AS E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 529 FLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--------SGKDT 579
FL E V+ ++VRL+G +G +V E + +G+L +LR G+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 580 LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEV 638
T +Q+A + A G+ Y++ ++HRD+ N ++ +F K+ DFG+ + + E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITE 696
+ + +M PE + G + D+++FGVVL+E+ S E + +NE + +
Sbjct: 184 AYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ L QPD + ++ L R C Q NP++RP+
Sbjct: 244 ----FVMDGGYLDQPD-------------------NCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 757 AIV 759
IV
Sbjct: 281 EIV 283
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 114/239 (47%), Gaps = 29/239 (12%)
Query: 459 ESAALVAAPGVTGITVDKSV--EFSYEELAKATNDFSMGNKIGQGGFGAVFYAE--LRGE 514
E + + P V K++ + Y LA +F + KIG+G F V+ A L G
Sbjct: 3 EQSQGMQGPPVPQFQPQKALRPDMGYNTLA----NFRIEKKIGRGQFSEVYRAACLLDGV 58
Query: 515 KAAIKK------MDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGN 567
A+KK MD +A + + E+ +L ++H N+++ +E L +V E + G+
Sbjct: 59 PVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGD 118
Query: 568 LNQHLRGSGK------DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK 621
L++ ++ K + W +Q+ LE++H V +HRDIKPAN+ I
Sbjct: 119 LSRMIKHFKKQKRLIPERTVWKYFVQLC----SALEHMHSRRV---MHRDIKPANVFITA 171
Query: 622 NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYEL 680
K+ D GL + + + H+ LVGT YM PE + K D+++ G +LYE+
Sbjct: 172 TGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 29/247 (11%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTH------- 538
+ DF + +G G FG V R G A+K + KE + LK + H
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVL----KKEIVVRLKQVEHTNDERLM 59
Query: 539 ---VHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
V H ++R+ G + +F++ +YIE G L LR S + A +
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCL 117
Query: 595 GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
LEY+H + I+RD+KP NIL+DKN K+ DFG AK V L GT Y+
Sbjct: 118 ALEYLHSKDI---IYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYI 170
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714
PE + ID ++FG+++YE+++ +N T L A E+ P
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA---ELRFPPFFN 227
Query: 715 EDLQRLV 721
ED++ L+
Sbjct: 228 EDVKDLL 234
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 130
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 190
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 191 -SKFSVASDVWSFGVVLYELFTYIEK 215
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 107/224 (47%), Gaps = 36/224 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG--------------KDTLT 581
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 203
Query: 642 SVH---TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
V RL +M PE + + DV++FGV+L+E+ S
Sbjct: 204 YVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 37 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V E +ENG+L+ LR T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGM 152
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 253
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 254 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 16/194 (8%)
Query: 492 FSMGNKIGQGGFGAVFYAEL-RGEKAAIKKMD--MQASKEFLAELKVLTHVHHLNLVRLI 548
+ K+G G FG V+ A + K A+K M + + FLAE V+ + H LV+L
Sbjct: 184 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLH 243
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ ++++ E++ G+L L+ + + A G+ +I + YI
Sbjct: 244 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YI 300
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668
HRD++ ANIL+ + K+ADFGLA+ VG+ + PE +G + K
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLAR---VGAKF-------PIKWTAPEAINFGSFTIKS 350
Query: 669 DVYAFGVVLYELIS 682
DV++FG++L E+++
Sbjct: 351 DVWSFGILLMEIVT 364
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 136/303 (44%), Gaps = 49/303 (16%)
Query: 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAELR----GE---KAAIKKMDMQASK----E 528
F +E + ++ ++GQG FG V+ R GE + A+K ++ AS E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 529 FLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--------SGKDT 579
FL E V+ ++VRL+G +G +V E + +G+L +LR G+
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 580 LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEV 638
T +Q+A + A G+ Y++ ++HRD+ N ++ +F K+ DFG+ + + E
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET 183
Query: 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITE 696
+ + +M PE + G + D+++FGVVL+E+ S E + +NE + +
Sbjct: 184 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 243
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ L QPD + ++ L R C Q NP++RP+
Sbjct: 244 ----FVMDGGYLDQPD-------------------NCPERVTDLMRMCWQFNPKMRPTFL 280
Query: 757 AIV 759
IV
Sbjct: 281 EIV 283
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG--------------KDTLT 581
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 183
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK------- 634
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 184 LEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 240
Query: 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
G A + + +M PE + + DV++FGV+L+E+ S
Sbjct: 241 YVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 30/284 (10%)
Query: 498 IGQGGFGAV-FYA-----ELRGEKAAIKKMDMQASKE----FLAELKVLTHVHHLNLVRL 547
+G+G FG V Y + GE A+K + A + + E+ +L ++H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 548 IGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
G C + SL LV EY+ G+L +L + ++ + + A G+ Y+H
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQH- 154
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQY 661
YIHRD+ N+L+D + K+ DFGLAK G R G F Y P +Y
Sbjct: 155 --YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721
+ DV++FGV LYEL++ ++ E G+ VLR + E +RL
Sbjct: 213 -KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 271
Query: 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
P D P + + L + C + RP+ ++ L T+
Sbjct: 272 RP---DKCPAE----VYHLMKNCWETEASFRPTFENLIPILKTV 308
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 137/303 (45%), Gaps = 49/303 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQASK----EFLA 531
+E A +M ++GQG FG V+ +G + AIK ++ AS EFL
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTL--------TW 582
E V+ + ++VRL+G +G ++ E + G+L +LR + +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
S +Q+A + A G+ Y++ + ++HRD+ N + ++F K+ DFG+ + + E
Sbjct: 125 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + DV++FGVVL+E+ + E + +NE +
Sbjct: 182 RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR--- 238
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ +L +PD D+ + L R C Q NP++RPS I+
Sbjct: 239 -FVMEGGLLDKPDNCPDM-------------------LLELMRMCWQYNPKMRPSFLEII 278
Query: 760 VAL 762
++
Sbjct: 279 SSI 281
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 138
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 198
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 199 -SKFSVASDVWSFGVVLYELFTYIEK 223
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 44/228 (19%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG--------------KDTLT 581
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK------- 634
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 205
Query: 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
G A + + +M PE + + DV++FGV+L+E+ S
Sbjct: 206 YVRKGDARLPLK------WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 192 -SKFSVASDVWSFGVVLYELFTYIEK 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 136
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 196
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 197 -SKFSVASDVWSFGVVLYELFTYIEK 221
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 103/204 (50%), Gaps = 23/204 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE----------KAAIKKMDMQASKEFLAELKVLTHV 539
+DF +G +G+G FG V+ A + K+ I+K ++ + E+++ H+
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVE--HQLRREIEIQAHL 80
Query: 540 HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
HH N++RL Y + ++L+ EY G L + L+ S T I + A L Y
Sbjct: 81 HHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEELADALMY 138
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
H V IHRDIKP N+L+ K+ADFG + V + S+ + + GT Y+PPE
Sbjct: 139 CHGKKV---IHRDIKPENLLLGLKGELKIADFGWS----VHAPSLRRKTMCGTLDYLPPE 191
Query: 658 YAQYGEVSPKIDVYAFGVVLYELI 681
+ + K+D++ GV+ YEL+
Sbjct: 192 MIEGRMHNEKVDLWCIGVLCYELL 215
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 135
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 195
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 196 -SKFSVASDVWSFGVVLYELFTYIEK 220
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 134
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 195 -SKFSVASDVWSFGVVLYELFTYIEK 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 20/205 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 162
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 222
Query: 661 YGEVSPKIDVYAFGVVLYELISAME 685
+ S DV++FGVVLYEL + +E
Sbjct: 223 -SKFSVASDVWSFGVVLYELFTYIE 246
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 129
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 189
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 190 -SKFSVASDVWSFGVVLYELFTYIEK 214
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 135/293 (46%), Gaps = 45/293 (15%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLI 548
D ++ +G+G +G V+ +GE A+K + K + E ++ V H N++ I
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFI 68
Query: 549 GYCVEG-----SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH--- 600
+ L+L+ Y E G+L +L+ + DT+ + ++I L A GL ++H
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHIEI 125
Query: 601 --EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV---HTRLVGTFGYMP 655
P HRD+K NIL+ KN + +AD GLA + + + + VGT YM
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 656 PEYAQYG------EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVA----LFE 705
PE + ++D++AFG+VL+E+ M S G+V F
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRM-----------VSNGIVEDYKPPFY 234
Query: 706 EVLRQPDPREDLQRLV-----DPRLGDDYPID-SVRKMARLARACTQENPQLR 752
+V+ ED++++V P + + + D ++ +A+L + C +NP R
Sbjct: 235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG--------------KDTLT 581
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK------- 634
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
G A + +M PE + + DV++FGV+L+E+ S
Sbjct: 195 YVRKGDARL------PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 137
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 197
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 198 -SKFSVASDVWSFGVVLYELFTYIEK 222
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 191
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 192 -SKFSVASDVWSFGVVLYELFTYIEK 216
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 7/191 (3%)
Query: 496 NKIGQGGFGAVFYAELRGE-KAAIK--KMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV 552
K+G G FG V+ K A+K K + + FL E ++ + H LVRL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 553 -EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRD 611
E ++++ E++ G+L L+ + + + A G+ YI YIHRD
Sbjct: 78 KEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRD 134
Query: 612 IKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVY 671
++ AN+L+ ++ K+ADFGLA++ E + + PE +G + K +V+
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 672 AFGVVLYELIS 682
+FG++LYE+++
Sbjct: 195 SFGILLYEIVT 205
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 44/228 (19%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSG--------------KDTLT 581
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR KD LT
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 137
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK------- 634
+ + A+G+E++ IHRD+ NIL+ + K+ DFGLA+
Sbjct: 138 LEHLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 194
Query: 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
G A + +M PE + + DV++FGV+L+E+ S
Sbjct: 195 YVRKGDARL------PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 212 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 261
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 262 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 310 VEDLDRILTLTTNEE 324
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 20/205 (9%)
Query: 497 KIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVRL 547
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 548 IGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
G C +L L+ E++ G+L ++L+ K+ + +Q +G+EY+
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQ-KHKERIDHIKLLQYTSQICKGMEYL---GT 135
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQY 661
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE- 194
Query: 662 GEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 195 SKFSVASDVWSFGVVLYELFTYIEK 219
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 20/205 (9%)
Query: 497 KIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVRL 547
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 548 IGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---GT 150
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQY 661
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE- 209
Query: 662 GEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 210 SKFSVASDVWSFGVVLYELFTYIEK 234
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 212 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 261
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 262 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 310 VEDLDRILTLTTNEE 324
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 149
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 209
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 210 -SKFSVASDVWSFGVVLYELFTYIEK 234
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 131
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTE 191
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 192 -SKFSVASDVWSFGVVLYELFTYIEK 216
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKC---IHRDLTARNVLVTENNVMKIADFGLARDINNID 198
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 199 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 248
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 249 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 296
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 297 VEDLDRILTLTTNQE 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 212 YYKNTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 261
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 262 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 310 VEDLDRILTLTTNEE 324
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 200
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 201 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 250
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 251 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 298
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 299 VEDLDRILTLTTNEE 313
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 142/309 (45%), Gaps = 52/309 (16%)
Query: 481 SYEELAKATNDF---------SMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM--- 523
+YE+ +A ++F ++ IG G FG V L+ G++ AIK + +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 524 -QASKEFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLR-GSGKDTL 580
+ ++FL E ++ H N++ L G + + +V EY+ENG+L+ L+ G+ T+
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV 123
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640
M + + G++Y+ + Y+HRD+ NILI+ N KV+DFGL+++ E
Sbjct: 124 IQLVGMLRGISA--GMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 641 ASVHTRLVGT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVV--KTNETITE 696
+ +T G + PE + + + DV+++G+V++E++S E TN+ + +
Sbjct: 179 EAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIK 238
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ EE R P P+D + +L C Q+ RP
Sbjct: 239 AV------EEGYRLPS-----------------PMDCPAALYQLMLDCWQKERNSRPKFD 275
Query: 757 AIVVALMTL 765
IV L L
Sbjct: 276 EIVNMLDKL 284
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 45/286 (15%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGYCVEG- 554
+G+G +G V+ +GE A+K + K + E ++ V H N++ I +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 104
Query: 555 ----SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH-----EHTVP 605
L+L+ Y E G+L +L+ + DT+ + ++I L A GL ++H P
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHIEIFGTQGKP 161
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV---HTRLVGTFGYMPPEYAQYG 662
HRD+K NIL+ KN + +AD GLA + + + + VGT YM PE
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 221
Query: 663 ------EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVA----LFEEVLRQPD 712
+ ++D++AFG+VL+E+ M S G+V F +V+
Sbjct: 222 IQVDCFDSYKRVDIWAFGLVLWEVARRM-----------VSNGIVEDYKPPFYDVVPNDP 270
Query: 713 PREDLQRLV-----DPRLGDDYPID-SVRKMARLARACTQENPQLR 752
ED++++V P + + + D ++ +A+L + C +NP R
Sbjct: 271 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 203
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 204 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 253
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 254 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 301
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 302 VEDLDRILTLTTNEE 316
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 497 KIGQGGFGAVFYAE--LRGEKAAIKKMDMQAS--KEFLA-ELKVLTHVHHLNLVR-LIGY 550
KIGQG G V+ A G++ AI++M++Q KE + E+ V+ + N+V L Y
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V EY+ G+L + + D +A + + + LE++H + V IHR
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQV---IHR 140
Query: 611 DIKPANILIDKNFRAKVADFGL-AKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKID 669
DIK NIL+ + K+ DFG A++T S + +VGT +M PE PK+D
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSEMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 670 VYAFGVVLYELISA 683
+++ G++ E+I
Sbjct: 199 IWSLGIMAIEMIEG 212
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 39/281 (13%)
Query: 498 IGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLI 548
IG G FG V L+ G++ AIK + + ++FL+E ++ H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 549 GYCVEGS-LFLVYEYIENGNLNQHLR-GSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G + + ++ EY+ENG+L+ LR G+ T+ M + S G++Y+ + +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGS--GMKYLSDMS--- 130
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGT--FGYMPPEYAQYGEV 664
Y+HRD+ NIL++ N KV+DFG++++ E + +T G + PE Y +
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 190
Query: 665 SPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724
+ DV+++G+V++E++S E + ++ EE R P P
Sbjct: 191 TSASDVWSYGIVMWEVMSYGERPYWD----MSNQDVIKAIEEGYRLPPPM---------- 236
Query: 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
D PI + +L C Q+ RP IV L L
Sbjct: 237 ---DCPI----ALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ + + +Q +G+EY+
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHA-ERIDHIKLLQYTSQICKGMEYL---G 134
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHRD+ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTE 194
Query: 661 YGEVSPKIDVYAFGVVLYELISAME 685
+ S DV++FGVVLYEL + +E
Sbjct: 195 -SKFSVASDVWSFGVVLYELFTYIE 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 30/284 (10%)
Query: 498 IGQGGFGAV-FYA-----ELRGEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRL 547
+G+G FG V Y + GE A+K + Q + E+ +L ++H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 548 IGYCV---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
G C E SL LV EY+ G+L +L + ++ + + A G+ Y+H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHSQH- 137
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQY 661
YIHR++ N+L+D + K+ DFGLAK G R G F Y P +Y
Sbjct: 138 --YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721
+ DV++FGV LYEL++ ++ E G+ VLR + E +RL
Sbjct: 196 -KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
P D P + + L + C + RP+ ++ L T+
Sbjct: 255 RP---DKCPCE----VYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 106/202 (52%), Gaps = 24/202 (11%)
Query: 498 IGQGGFGAVFYAELR--GEK---AAIKKMD----MQASKEFLAELKVLTHVHHLNLVRLI 548
IG G FG V L+ G+K AIK + + +EFL+E ++ H N++RL
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 549 GYCVEG-SLFLVYEYIENGNLNQHLR-GSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G + ++ E++ENG L+ LR G+ T+ M + A G+ Y+ E +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI--ASGMRYLAEMS--- 136
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTFGYMP-----PEYAQ 660
Y+HRD+ NIL++ N KV+DFGL++ L E S +T +G G +P PE
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG--GKIPIRWTAPEAIA 194
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + + D +++G+V++E++S
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMS 216
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 106/198 (53%), Gaps = 18/198 (9%)
Query: 498 IGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLI 548
IG G FG V L+ G++ AIK + + ++FL+E ++ H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 549 GYCVEGS-LFLVYEYIENGNLNQHLR-GSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G + + ++ EY+ENG+L+ LR G+ T+ M + S G++Y+ + +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGS--GMKYLSDMS--- 136
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGT--FGYMPPEYAQYGEV 664
Y+HRD+ NIL++ N KV+DFG++++ E + +T G + PE Y +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
Query: 665 SPKIDVYAFGVVLYELIS 682
+ DV+++G+V++E++S
Sbjct: 197 TSASDVWSYGIVMWEVMS 214
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 144/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGS--------------GKDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 257
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 258 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 307
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 308 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 355
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 356 VEDLDRILTLTTNEE 370
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 144/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ EY GNL ++LR ++ +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N ++ADFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMRIADFGLARDINNID 211
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 212 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 261
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 262 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 310 VEDLDRILTLTTNEE 324
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQASKEF---------LAELKVLTHVH 540
+ +G+ +G G FG V E L G K A+K ++ Q + + LK+ H H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 541 HLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
+ L ++I F+V EY+ G L ++ G+ + R+ + SA ++Y H
Sbjct: 73 IIKLYQVIS--TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA--VDYCH 128
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H V +HRD+KP N+L+D + AK+ADFGL+ + G + G+ Y PE
Sbjct: 129 RHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS--CGSPNYAAPEVIS 183
Query: 661 YGEV--SPKIDVYAFGVVLYELISA 683
G + P++D+++ GV+LY L+
Sbjct: 184 -GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 38/243 (15%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRGEKA--AIKKMDMQ----ASKEFLAELKVLTHVHHLNL 544
DF +G+GGFG VF A+ + + AIK++ + A ++ + E+K L + H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 545 VRLIGYCVEGS-------------LFLVYEYIENGNLNQHLRGSGKDTLTWSAR---MQI 588
VR +E + L++ + NL + +G+ T+ R + I
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTIEERERSVCLHI 123
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-----------LTE 637
L A +E++H + +HRD+KP+NI + KV DFGL LT
Sbjct: 124 FLQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 180
Query: 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITES 697
+ + + HT VGT YM PE S K+D+++ G++L+EL+ ++ T+T+
Sbjct: 181 MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDV 240
Query: 698 TGL 700
L
Sbjct: 241 RNL 243
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 497 KIGQGGFGAVFYAE--LRGEKAAIKKMDMQAS--KEFLA-ELKVLTHVHHLNLVR-LIGY 550
KIGQG G V+ A G++ AI++M++Q KE + E+ V+ + N+V L Y
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V EY+ G+L + + D +A + + + LE++H + V IHR
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQV---IHR 140
Query: 611 DIKPANILIDKNFRAKVADFGL-AKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKID 669
DIK NIL+ + K+ DFG A++T S + +VGT +M PE PK+D
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 670 VYAFGVVLYELISA 683
+++ G++ E+I
Sbjct: 199 IWSLGIMAIEMIEG 212
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 132/286 (46%), Gaps = 45/286 (15%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGYCVEG- 554
+G+G +G V+ +GE A+K + K + E ++ V H N++ I +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 555 ----SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH-----EHTVP 605
L+L+ Y E G+L +L+ + DT+ + ++I L A GL ++H P
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTV---SCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV---HTRLVGTFGYMPPEYAQYG 662
HRD+K NIL+ KN + +AD GLA + + + + VGT YM PE
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET 192
Query: 663 ------EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVA----LFEEVLRQPD 712
+ ++D++AFG+VL+E+ M S G+V F +V+
Sbjct: 193 IQVDCFDSYKRVDIWAFGLVLWEVARRM-----------VSNGIVEDYKPPFYDVVPNDP 241
Query: 713 PREDLQRLV-----DPRLGDDYPID-SVRKMARLARACTQENPQLR 752
ED++++V P + + + D ++ +A+L + C +NP R
Sbjct: 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR 287
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 497 KIGQGGFGAVFYAE--LRGEKAAIKKMDMQAS--KEFLA-ELKVLTHVHHLNLVR-LIGY 550
KIGQG G V+ A G++ AI++M++Q KE + E+ V+ + N+V L Y
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V EY+ G+L + + D +A + + + LE++H + V IHR
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQV---IHR 141
Query: 611 DIKPANILIDKNFRAKVADFGL-AKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKID 669
DIK NIL+ + K+ DFG A++T S + +VGT +M PE PK+D
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 670 VYAFGVVLYELISA 683
+++ G++ E+I
Sbjct: 200 IWSLGIMAIEMIEG 213
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 497 KIGQGGFGAVFYAE--LRGEKAAIKKMDMQAS--KEFLA-ELKVLTHVHHLNLVR-LIGY 550
KIGQG G V+ A G++ AI++M++Q KE + E+ V+ + N+V L Y
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V EY+ G+L + + D +A + + + LE++H + V IHR
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQV---IHR 140
Query: 611 DIKPANILIDKNFRAKVADFGL-AKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKID 669
DIK NIL+ + K+ DFG A++T S + +VGT +M PE PK+D
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 670 VYAFGVVLYELISA 683
+++ G++ E+I
Sbjct: 199 IWSLGIMAIEMIEG 212
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 126/284 (44%), Gaps = 30/284 (10%)
Query: 498 IGQGGFGAV-FYA-----ELRGEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRL 547
+G+G FG V Y + GE A+K + Q + E+ +L ++H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 548 IGYCV---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
G C E SL LV EY+ G+L +L + ++ + + A G+ Y+H
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL---PRHSIGLAQLLLFAQQICEGMAYLHAQH- 137
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQY 661
YIHR++ N+L+D + K+ DFGLAK G R G F Y P +Y
Sbjct: 138 --YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721
+ DV++FGV LYEL++ ++ E G+ VLR + E +RL
Sbjct: 196 -KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
P D P + + L + C + RP+ ++ L T+
Sbjct: 255 RP---DKCPCE----VYHLMKNCWETEASFRPTFENLIPILKTV 291
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 49/286 (17%)
Query: 497 KIGQGGFGAVFYAELR----GE---KAAIKKMDMQASK----EFLAELKVLTHVHHLNLV 545
++GQG FG V+ R GE + A+K ++ AS EFL E V+ ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 546 RLIGYCVEGS-LFLVYEYIENGNLNQHLRG--------SGKDTLTWSARMQIALDSARGL 596
RL+G +G +V E + +G+L +LR G+ T +Q+A + A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTFGYMP 655
Y++ ++HRD+ N ++ +F K+ DFG+ + + E + + +M
Sbjct: 143 AYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTGLVALFEEVLRQPDP 713
PE + G + D+++FGVVL+E+ S E + +NE + + + L QPD
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK----FVMDGGYLDQPD- 254
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ ++ L R C Q NP++RP+ IV
Sbjct: 255 ------------------NCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 24/202 (11%)
Query: 498 IGQGGFGAVFYAELR--GEK---AAIKKMD----MQASKEFLAELKVLTHVHHLNLVRLI 548
IG G FG V L+ G+K AIK + + +EFL+E ++ H N++RL
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 549 GYCVEG-SLFLVYEYIENGNLNQHLR-GSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G + ++ E++ENG L+ LR G+ T+ M + A G+ Y+ E +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGI--ASGMRYLAEMS--- 138
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHTRLVGTFGYMP-----PEYAQ 660
Y+HRD+ NIL++ N KV+DFGL++ L E S T +G G +P PE
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG--GKIPIRWTAPEAIA 196
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + + D +++G+V++E++S
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMS 218
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 23/205 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQASKEF---------LAELKVLTHVH 540
+ +G+ +G G FG V E L G K A+K ++ Q + + LK+ H H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 541 HLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
+ L ++I F+V EY+ G L ++ G+ + R+ + SA ++Y H
Sbjct: 73 IIKLYQVIS--TPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA--VDYCH 128
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H V +HRD+KP N+L+D + AK+ADFGL+ + G + G+ Y PE
Sbjct: 129 RHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPEVIS 183
Query: 661 YGEV--SPKIDVYAFGVVLYELISA 683
G + P++D+++ GV+LY L+
Sbjct: 184 -GRLYAGPEVDIWSCGVILYALLCG 207
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 116/225 (51%), Gaps = 27/225 (12%)
Query: 480 FSYEELAKATNDFS---------MGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM-- 523
F++E+ +A +F+ + IG G FG V L+ G++ AIK +
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 524 --QASKEFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLR-GSGKDT 579
+ ++FL+E ++ H N++ L G + + ++ EY+ENG+L+ LR G+ T
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 580 LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639
+ M + S G++Y+ + + +HRD+ NIL++ N KV+DFG++++ E
Sbjct: 130 VIQLVGMLRGIGS--GMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 640 SASVHTRLVGT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ +T G + PE Y + + DV+++G+V++E++S
Sbjct: 185 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 142/314 (45%), Gaps = 57/314 (18%)
Query: 494 MGNKIGQGGFGAVFYAEL---------RGEKAAIKKMDMQASK----EFLAELKVLTHV- 539
+G +G+G FG V AE R K A+K + A++ + ++E++++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRG--------------SGKDTLTWSA 584
H N++ L+G C + G L+++ EY GNL ++L+ + ++ L+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV 643
+ A ARG+EY+ IHRD+ N+L+ ++ K+ADFGLA+ + +
Sbjct: 152 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703
T +M PE + + DV++FGV+L+E+ + + G+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------GGSPYPGV--- 256
Query: 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL- 762
P E+L +L+ D P + ++ + R C P RP+ + +V L
Sbjct: 257 ---------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 763 --MTLSSSSEDWDI 774
+ L+S+ E D+
Sbjct: 308 RIVALTSNQEXLDL 321
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 119/229 (51%), Gaps = 21/229 (9%)
Query: 496 NKIGQGGFGAVFYA-ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIG 549
K+G+G +G V+ A + +G A+K++ + A E + E+ +L +HH N+V LI
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 550 YC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIAL-DSARGLEYIHEHTVPVY 607
E L LV+E++E +L + L T ++++I L RG+ + H+H +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQHRI--- 140
Query: 608 IHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ-YGEVSP 666
+HRD+KP N+LI+ + K+ADFGLA+ + S +T V T Y P+ + S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS-YTHEVVTLWYRAPDVLMGSKKYST 199
Query: 667 KIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
+D+++ G + E+I+ +T+ L +F +L P+PRE
Sbjct: 200 SVDIWSIGCIFAEMITGKPLF----PGVTDDDQLPKIF-SILGTPNPRE 243
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 34/283 (12%)
Query: 490 NDFSMGNKIGQGGFGAV--FYAELRGEKAAIKKMDMQASK----EFLAELKVLTHVHHLN 543
+D+ + IG G V Y + EK AIK+++++ + E L E++ ++ HH N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 544 LVRL-IGYCVEGSLFLVYEYIENG---NLNQHLRGSGKD---TLTWSARMQIALDSARGL 596
+V + V+ L+LV + + G ++ +H+ G+ L S I + GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA----SVHTRLVGTFG 652
EY+H++ IHRD+K NIL+ ++ ++ADFG++ G V VGT
Sbjct: 130 EYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 186
Query: 653 YMPPE-YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711
+M PE Q K D+++FG+ EL + K L Q
Sbjct: 187 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL---------QN 237
Query: 712 DPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS 754
DP + D + Y S RKM L C Q++P+ RP+
Sbjct: 238 DPPSLETGVQDKEMLKKYG-KSFRKMISL---CLQKDPEKRPT 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 34/283 (12%)
Query: 490 NDFSMGNKIGQGGFGAV--FYAELRGEKAAIKKMDMQASK----EFLAELKVLTHVHHLN 543
+D+ + IG G V Y + EK AIK+++++ + E L E++ ++ HH N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 544 LVRL-IGYCVEGSLFLVYEYIENG---NLNQHLRGSGKD---TLTWSARMQIALDSARGL 596
+V + V+ L+LV + + G ++ +H+ G+ L S I + GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA----SVHTRLVGTFG 652
EY+H++ IHRD+K NIL+ ++ ++ADFG++ G V VGT
Sbjct: 135 EYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPC 191
Query: 653 YMPPE-YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711
+M PE Q K D+++FG+ EL + K L Q
Sbjct: 192 WMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTL---------QN 242
Query: 712 DPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS 754
DP + D + Y S RKM L C Q++P+ RP+
Sbjct: 243 DPPSLETGVQDKEMLKKYG-KSFRKMISL---CLQKDPEKRPT 281
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 40/299 (13%)
Query: 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEF 529
EF+ E ATN S+ +G G FG V L+ +K AIK + + + ++F
Sbjct: 37 EFAKE--LDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDF 93
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L E ++ H N++RL G + + +V E +ENG+L+ LR T + +
Sbjct: 94 LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ-FTVIQLVGM 152
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
A G++Y+ + +HRD+ NILI+ N KV+DFGL+++ E + +T
Sbjct: 153 LRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRG 209
Query: 649 GT--FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
G + PE Y + + DV+++G+VL+E++S E + E
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP----------------YWE 253
Query: 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ Q D+ + VD P+D + +L C Q++ RP IV L L
Sbjct: 254 MSNQ-----DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 122 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 178 CKY--YSTAVDIWSLGCIFAEMVT 199
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 134/286 (46%), Gaps = 32/286 (11%)
Query: 498 IGQGGFGAVFYAEL------RGEKAAIKKMDMQASKEFLAELK----VLTHVHHLNLVRL 547
+G+G FG V GE+ A+K + ++ +A+LK +L +++H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 548 IGYCVE---GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
G C E + L+ E++ +G+L ++L K+ + +++ A+ +G++Y+
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSRQ- 134
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS--ASVHTRLVGTFGYMPPEYAQYG 662
Y+HRD+ N+L++ + K+ DFGL K E +V + PE
Sbjct: 135 --YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 192
Query: 663 EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722
+ DV++FGV L+EL++ ++ + +ALF +++ + + RLV+
Sbjct: 193 KFYIASDVWSFGVTLHELLTYCDS----------DSSPMALFLKMIGPTHGQMTVTRLVN 242
Query: 723 P-RLGDDYPI--DSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ G P + ++ +L R C + P R S + ++ L
Sbjct: 243 TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 288
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 119/229 (51%), Gaps = 21/229 (9%)
Query: 496 NKIGQGGFGAVFYA-ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIG 549
K+G+G +G V+ A + +G A+K++ + A E + E+ +L +HH N+V LI
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 550 YC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIAL-DSARGLEYIHEHTVPVY 607
E L LV+E++E +L + L T ++++I L RG+ + H+H +
Sbjct: 87 VIHSERCLTLVFEFMEK-DLKKVL--DENKTGLQDSQIKIYLYQLLRGVAHCHQHRI--- 140
Query: 608 IHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ-YGEVSP 666
+HRD+KP N+LI+ + K+ADFGLA+ + S +T V T Y P+ + S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS-YTHEVVTLWYRAPDVLMGSKKYST 199
Query: 667 KIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
+D+++ G + E+I+ +T+ L +F +L P+PRE
Sbjct: 200 SVDIWSIGCIFAEMITGKPLF----PGVTDDDQLPKIF-SILGTPNPRE 243
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 121 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEIL 176
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 LGCKY--YSTAVDIWSLGCIFAEMVT 200
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 134/286 (46%), Gaps = 32/286 (11%)
Query: 498 IGQGGFGAVFYAEL------RGEKAAIKKMDMQASKEFLAELK----VLTHVHHLNLVRL 547
+G+G FG V GE+ A+K + ++ +A+LK +L +++H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 548 IGYCVE---GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
G C E + L+ E++ +G+L ++L K+ + +++ A+ +G++Y+
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL-PKNKNKINLKQQLKYAVQICKGMDYLGSRQ- 146
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS--ASVHTRLVGTFGYMPPEYAQYG 662
Y+HRD+ N+L++ + K+ DFGL K E +V + PE
Sbjct: 147 --YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQS 204
Query: 663 EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722
+ DV++FGV L+EL++ ++ + +ALF +++ + + RLV+
Sbjct: 205 KFYIASDVWSFGVTLHELLTYCDS----------DSSPMALFLKMIGPTHGQMTVTRLVN 254
Query: 723 P-RLGDDYPI--DSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ G P + ++ +L R C + P R S + ++ L
Sbjct: 255 TLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 20/206 (9%)
Query: 496 NKIGQGGFGAV---FYAELR---GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVR 546
++G+G FG+V Y L+ GE A+KK+ ++F E+++L + H N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 547 LIGYCVEG---SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G C +L L+ EY+ G+L +L+ K+ + +Q +G+EY+
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEYL---G 132
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQ 660
YIHR++ NIL++ R K+ DFGL K+ + G F Y P +
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTE 192
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEA 686
+ S DV++FGVVLYEL + +E
Sbjct: 193 -SKFSVASDVWSFGVVLYELFTYIEK 217
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 141/314 (44%), Gaps = 58/314 (18%)
Query: 494 MGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVLTHV- 539
+G +G+G FG V AE G K A+K + A++ + ++E++++ +
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 132
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR------------- 585
H N++ L+G C + G L+++ EY GNL ++L+ L +S
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 586 -MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK---LTEVGSA 641
+ A ARG+EY+ IHRD+ N+L+ ++ K+ADFGLA+ +
Sbjct: 193 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701
+ + RL +M PE + + DV++FGV+L+E+ + + G+
Sbjct: 250 TTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------GGSPYPGV- 297
Query: 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761
P E+L +L+ D P + ++ + R C P RP+ + +V
Sbjct: 298 -----------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 346
Query: 762 LMTLSSSSEDWDIG 775
L + + + + ++G
Sbjct: 347 LDRIVALTSNQEMG 360
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 122 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 178 CKY--YSTAVDIWSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 176
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 CKY--YSTAVDIWSLGCIFAEMVT 198
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 122 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 178 CKY--YSTAVDIWSLGCIFAEMVT 199
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 176
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 CKY--YSTAVDIWSLGCIFAEMVT 198
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELR----GE---KAAIKKMDMQASK----EFLA 531
+E + ++ ++GQG FG V+ R GE + A+K ++ AS EFL
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--------SGKDTLTW 582
E V+ ++VRL+G +G +V E + +G+L +LR G+ T
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
+Q+A + A G+ Y++ ++HR++ N ++ +F K+ DFG+ + + E
Sbjct: 130 QEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + D+++FGVVL+E+ S E + +NE + +
Sbjct: 187 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--- 243
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ L QPD + ++ L R C Q NP +RP+ IV
Sbjct: 244 -FVMDGGYLDQPD-------------------NCPERVTDLMRMCWQFNPNMRPTFLEIV 283
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 143/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ Y GNL ++LR ++ +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 212 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 261
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 262 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 310 VEDLDRILTLTTNEE 324
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 129 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 184
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 185 CKY--YSTAVDIWSLGCIFAEMVT 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY 661
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 129 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 184
Query: 662 GE-VSPKIDVYAFGVVLYELIS 682
+ S +D+++ G + E+++
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVT 206
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 134/300 (44%), Gaps = 49/300 (16%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELR----GE---KAAIKKMDMQASK----EFLA 531
+E + ++ ++GQG FG V+ R GE + A+K ++ AS EFL
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRG--------SGKDTLTW 582
E V+ ++VRL+G +G +V E + +G+L +LR G+ T
Sbjct: 71 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 130
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSA 641
+Q+A + A G+ Y++ ++HR++ N ++ +F K+ DFG+ + + E
Sbjct: 131 QEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 187
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK--TNETITESTG 699
+ + +M PE + G + D+++FGVVL+E+ S E + +NE + +
Sbjct: 188 RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK--- 244
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
+ L QPD + ++ L R C Q NP +RP+ IV
Sbjct: 245 -FVMDGGYLDQPD-------------------NCPERVTDLMRMCWQFNPNMRPTFLEIV 284
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 19/199 (9%)
Query: 498 IGQGGFGAVFYAELR---GEK---AAIKKMDMQASK----EFLAELKVLTHVHHLNLVRL 547
IG G FG V+ L+ G+K AIK + ++ +FL E ++ H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 548 IGYCVE-GSLFLVYEYIENGNLNQHLR-GSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
G + + ++ EY+ENG L++ LR G+ ++ M + A G++Y+
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGI--AAGMKYLANMN-- 167
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGT--FGYMPPEYAQYGE 663
Y+HRD+ NIL++ N KV+DFGL+++ E + +T G + PE Y +
Sbjct: 168 -YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ DV++FG+V++E+++
Sbjct: 227 FTSASDVWSFGIVMWEVMT 245
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 126 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 181
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 182 CKY--YSTAVDIWSLGCIFAEMVT 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 23/198 (11%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFL-AELKVLTHVHHLNLVRLIG-Y 550
KIG+G G V A + G++ A+KKMD+ Q +E L E+ ++ HH N+V + Y
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 551 CVEGSLFLVYEYIENGNLNQ---HLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
V L++V E++E G L H R + + T + L R L Y+H V
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLHNQGV--- 162
Query: 608 IHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVGTFGYMPPEYAQYGEVS 665
IHRDIK +IL+ + R K++DFG S V R LVGT +M PE
Sbjct: 163 IHRDIKSDSILLTSDGRIKLSDFGFCAQV---SKEVPKRKXLVGTPYWMAPEVISRLPYG 219
Query: 666 PKIDVYAFGVVLYELISA 683
++D+++ G+++ E+I
Sbjct: 220 TEVDIWSLGIMVIEMIDG 237
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY 661
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 122 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 177
Query: 662 GE-VSPKIDVYAFGVVLYELIS 682
+ S +D+++ G + E+++
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 126/283 (44%), Gaps = 30/283 (10%)
Query: 498 IGQGGFGAV-FYA-----ELRGEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRL 547
+G+G FG V Y + GE A+K + Q + E+++L ++H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 548 IGYCV---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
G C E S+ LV EY+ G+L +L + + + + A G+ Y+H
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQH- 132
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQY 661
YIHR + N+L+D + K+ DFGLAK G R G F Y PE +
Sbjct: 133 --YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKE 189
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721
+ DV++FGV LYEL++ ++ + TE G VLR + E +RL
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 249
Query: 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764
P D P + + L + C + RP+ + +V L T
Sbjct: 250 RP---DRCPCE----IYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 143/315 (45%), Gaps = 59/315 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---------EKAAIKKMDMQASK----EFLAELKVL 536
+ ++G +G+G FG V AE G A+K + A++ + ++E++++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 537 THV-HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSG--------------KDTL 580
+ H N++ L+G C + G L+++ Y GNL ++LR ++ +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 581 TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVG 639
T+ + ARG+EY+ IHRD+ N+L+ +N K+ADFGLA+ + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNID 211
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITEST 698
T +M PE A + V + + DV++FGV+++E+ + +
Sbjct: 212 YYKKTTNGRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTL---------GGSPYP 261
Query: 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
G+ P E+L +L+ D P + ++ + R C P RP+ + +
Sbjct: 262 GI------------PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
Query: 759 VVAL---MTLSSSSE 770
V L +TL+++ E
Sbjct: 310 VEDLDRILTLTTNEE 324
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 22/204 (10%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRGEKA--AIKKM---------DMQASKEFLAELKVLTHV 539
DF + +G+G FG VF AE + AIK + D++ + + E +VL+
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT---MVEKRVLSLA 75
Query: 540 -HHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
H L + + + +LF V EY+ G+L H++ K L+ + A + GL+
Sbjct: 76 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGLQ 133
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
++H + ++RD+K NIL+DK+ K+ADFG+ K +G A GT Y+ PE
Sbjct: 134 FLHSKGI---VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT-NEFCGTPDYIAPE 189
Query: 658 YAQYGEVSPKIDVYAFGVVLYELI 681
+ + +D ++FGV+LYE++
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEML 213
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 126/283 (44%), Gaps = 30/283 (10%)
Query: 498 IGQGGFGAV-FYA-----ELRGEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRL 547
+G+G FG V Y + GE A+K + Q + E+++L ++H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 548 IGYCV---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
G C E S+ LV EY+ G+L +L + + + + A G+ Y+H
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---PRHCVGLAQLLLFAQQICEGMAYLHAQH- 131
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG---TFGYMPPEYAQY 661
YIHR + N+L+D + K+ DFGLAK G R G F Y PE +
Sbjct: 132 --YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA-PECLKE 188
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721
+ DV++FGV LYEL++ ++ + TE G VLR + E +RL
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 248
Query: 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764
P D P + + L + C + RP+ + +V L T
Sbjct: 249 RP---DRCPCE----IYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ ++H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 213
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 257
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 102/194 (52%), Gaps = 15/194 (7%)
Query: 497 KIGQGGFGAVFYAE--LRGEKAAIKKMDMQAS--KEFLA-ELKVLTHVHHLNLVR-LIGY 550
KIGQG G V+ A G++ AI++M++Q KE + E+ V+ + N+V L Y
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V EY+ G+L + + D +A + + + LE++H + V IHR
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---VCRECLQALEFLHSNQV---IHR 141
Query: 611 DIKPANILIDKNFRAKVADFGL-AKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKID 669
+IK NIL+ + K+ DFG A++T S + +VGT +M PE PK+D
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 670 VYAFGVVLYELISA 683
+++ G++ E+I
Sbjct: 200 IWSLGIMAIEMIEG 213
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ ++H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 227
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 49/284 (17%)
Query: 498 IGQGGFGAVFYAELR--GEK---AAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLI 548
IG G FG V L+ G++ AIK + + ++FL+E ++ H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 549 GYCVEGS-LFLVYEYIENGNLNQHLR-GSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
G + + + ++ E++ENG+L+ LR G+ T+ M + A G++Y+ +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGI--AAGMKYLADMN--- 129
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMP-----PEYAQ 660
Y+HR + NIL++ N KV+DFGL++ E ++ +T +G G +P PE Q
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG--GKIPIRWTAPEAIQ 187
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVV--KTNETITESTGLVALFEEVLRQPDPREDLQ 718
Y + + DV+++G+V++E++S E TN+ + + E+ R P
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA------IEQDYRLPP------ 235
Query: 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762
P+D + +L C Q++ RP IV L
Sbjct: 236 -----------PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 268
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + S + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 176
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 CKY--YSTAVDIWSLGCIFAEMVT 198
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E+++ +L + + S + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 123 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 178
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 179 LGCKY--YSTAVDIWSLGCIFAEMVT 202
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 142/314 (45%), Gaps = 57/314 (18%)
Query: 494 MGNKIGQGGFGAVFYAEL---------RGEKAAIKKMDMQASK----EFLAELKVLTHV- 539
+G +G+G FG V AE R K A+K + A++ + ++E++++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRG--------------SGKDTLTWSA 584
H N++ L+G C + G L+++ EY GNL ++L+ + ++ L+
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV 643
+ A ARG+EY+ IHRD+ N+L+ ++ K+ADFGLA+ + +
Sbjct: 152 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703
T +M PE + + DV++FGV+L+E+ + + G+
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------GGSPYPGV--- 256
Query: 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL- 762
P E+L +L+ D P + ++ + R C P RP+ + +V L
Sbjct: 257 ---------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 307
Query: 763 --MTLSSSSEDWDI 774
+ L+S+ E D+
Sbjct: 308 RIVALTSNQEYLDL 321
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 601 EHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 204
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 205 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 248
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 22/204 (10%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRGEKA--AIKKM---------DMQASKEFLAELKVLTHV 539
DF + +G+G FG VF AE + AIK + D++ + + E +VL+
Sbjct: 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT---MVEKRVLSLA 74
Query: 540 -HHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
H L + + + +LF V EY+ G+L H++ K L+ + A + GL+
Sbjct: 75 WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEIILGLQ 132
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
++H + ++RD+K NIL+DK+ K+ADFG+ K +G A + GT Y+ PE
Sbjct: 133 FLHSKGI---VYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNX-FCGTPDYIAPE 188
Query: 658 YAQYGEVSPKIDVYAFGVVLYELI 681
+ + +D ++FGV+LYE++
Sbjct: 189 ILLGQKYNHSVDWWSFGVLLYEML 212
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 61/312 (19%)
Query: 494 MGNKIGQGGFGAVFYAEL---------RGEKAAIKKMDMQASK----EFLAELKVLTHV- 539
+G +G+G FG V AE R K A+K + A++ + ++E++++ +
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 84
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR------------- 585
H N++ L+G C + G L+++ EY GNL ++L+ L +S
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 586 -MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK---LTEVGSA 641
+ A ARG+EY+ IHRD+ N+L+ ++ K+ADFGLA+ +
Sbjct: 145 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701
+ + RL +M PE + + DV++FGV+L+E+ + + G+
Sbjct: 202 TTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------GGSPYPGV- 249
Query: 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761
P E+L +L+ D P + ++ + R C P RP+ + +V
Sbjct: 250 -----------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 298
Query: 762 L---MTLSSSSE 770
L + L+S+ E
Sbjct: 299 LDRIVALTSNQE 310
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 213
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 257
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 110/223 (49%), Gaps = 32/223 (14%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGE-----KAAIKKMDMQAS-----KEFLAE 532
E++ N +G +G+G FG+V L+ E K A+K M + S +EFL+E
Sbjct: 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSE 86
Query: 533 LKVLTHVHHLNLVRLIGYCVEGSL------FLVYEYIENGNLNQHLRGS----GKDTLTW 582
+ H N++RL+G C+E S ++ +++ G+L+ +L S G +
Sbjct: 87 AACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL 146
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642
++ +D A G+EY+ ++HRD+ N ++ + VADFGL+K ++ S
Sbjct: 147 QTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSK--KIYSGD 201
Query: 643 VHTRLVGTFGYMPPEYAQYGEVSPKI-----DVYAFGVVLYEL 680
+ + G MP ++ ++ ++ DV+AFGV ++E+
Sbjct: 202 YYRQ--GRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 227
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 212
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 256
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 138/310 (44%), Gaps = 57/310 (18%)
Query: 494 MGNKIGQGGFGAVFYAEL---------RGEKAAIKKMDMQASK----EFLAELKVLTHV- 539
+G +G+G FG V AE R K A+K + A++ + ++E++++ +
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 80
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR------------- 585
H N++ L+G C + G L+++ EY GNL ++L+ L +S
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 586 -MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV 643
+ A ARG+EY+ IHRD+ N+L+ ++ K+ADFGLA+ + +
Sbjct: 141 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703
T +M PE + + DV++FGV+L+E+ + + G+
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------GGSPYPGV--- 245
Query: 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL- 762
P E+L +L+ D P + ++ + R C P RP+ + +V L
Sbjct: 246 ---------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 296
Query: 763 --MTLSSSSE 770
+ L+S+ E
Sbjct: 297 RIVALTSNQE 306
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 219
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 220 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 263
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 212
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 213 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 256
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 122 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 177
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 178 LGCKY--YSTAVDIWSLGCIFAEMVT 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 123 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 178
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 179 LGCKY--YSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 122 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 177
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 178 LGCKY--YSTAVDIWSLGCIFAEMVT 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 122 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 177
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 178 LGCKY--YSTAVDIWSLGCIFAEMVT 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 120 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 175
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 176 LGCKY--YSTAVDIWSLGCIFAEMVT 199
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 229
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 230 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 273
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 61/312 (19%)
Query: 494 MGNKIGQGGFGAVFYAEL---------RGEKAAIKKMDMQASK----EFLAELKVLTHV- 539
+G +G+G FG V AE R K A+K + A++ + ++E++++ +
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 83
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR------------- 585
H N++ L+G C + G L+++ EY GNL ++L+ L +S
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 586 -MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK---LTEVGSA 641
+ A ARG+EY+ IHRD+ N+L+ ++ K+ADFGLA+ +
Sbjct: 144 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701
+ + RL +M PE + + DV++FGV+L+E+ + + G+
Sbjct: 201 TTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------GGSPYPGV- 248
Query: 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761
P E+L +L+ D P + ++ + R C P RP+ + +V
Sbjct: 249 -----------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 297
Query: 762 L---MTLSSSSE 770
L + L+S+ E
Sbjct: 298 LDRIVALTSNQE 309
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 57/310 (18%)
Query: 494 MGNKIGQGGFGAVFYAEL---------RGEKAAIKKMDMQASK----EFLAELKVLTHV- 539
+G +G+G FG V AE R K A+K + A++ + ++E++++ +
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 76
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRG--------------SGKDTLTWSA 584
H N++ L+G C + G L+++ EY GNL ++L+ + ++ L+
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV 643
+ A ARG+EY+ IHRD+ N+L+ ++ K+ADFGLA+ + +
Sbjct: 137 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703
T +M PE + + DV++FGV+L+E+ + + G+
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------GGSPYPGV--- 241
Query: 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL- 762
P E+L +L+ D P + ++ + R C P RP+ + +V L
Sbjct: 242 ---------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 292
Query: 763 --MTLSSSSE 770
+ L+S+ E
Sbjct: 293 RIVALTSNQE 302
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 120 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 175
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 176 LGCKY--YSTAVDIWSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 120 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 175
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 176 LGCKY--YSTAVDIWSLGCIFAEMVT 199
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 120 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 175
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 176 LGCKY--YSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 121 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 176
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 LGCKY--YSTAVDIWSLGCIFAEMVT 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 121 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 176
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 LGCKY--YSTAVDIWSLGCIFAEMVT 200
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 61/312 (19%)
Query: 494 MGNKIGQGGFGAVFYAEL---------RGEKAAIKKMDMQASK----EFLAELKVLTHV- 539
+G +G+G FG V AE R K A+K + A++ + ++E++++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR------------- 585
H N++ L+G C + G L+++ EY GNL ++L+ L +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 586 -MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK---LTEVGSA 641
+ A ARG+EY+ IHRD+ N+L+ ++ K+ADFGLA+ +
Sbjct: 152 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701
+ + RL +M PE + + DV++FGV+L+E+ + + G+
Sbjct: 209 TTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------GGSPYPGV- 256
Query: 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761
P E+L +L+ D P + ++ + R C P RP+ + +V
Sbjct: 257 -----------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
Query: 762 L---MTLSSSSE 770
L + L+S+ E
Sbjct: 306 LDRIVALTSNQE 317
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 124 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 179
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 180 LGCKY--YSTAVDIWSLGCIFAEMVT 203
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 61/312 (19%)
Query: 494 MGNKIGQGGFGAVFYAEL---------RGEKAAIKKMDMQASK----EFLAELKVLTHV- 539
+G +G+G FG V AE R K A+K + A++ + ++E++++ +
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG 91
Query: 540 HHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR------------- 585
H N++ L+G C + G L+++ EY GNL ++L+ L +S
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 586 -MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK---LTEVGSA 641
+ A ARG+EY+ IHRD+ N+L+ ++ K+ADFGLA+ +
Sbjct: 152 LVSCAYQVARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701
+ + RL +M PE + + DV++FGV+L+E+ + + G+
Sbjct: 209 TTNGRL--PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL---------GGSPYPGV- 256
Query: 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761
P E+L +L+ D P + ++ + R C P RP+ + +V
Sbjct: 257 -----------PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 305
Query: 762 L---MTLSSSSE 770
L + L+S+ E
Sbjct: 306 LDRIVALTSNQE 317
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + + S + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 123 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 178
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 179 LGCKY--YSTAVDIWSLGCIFAEMVT 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLG 176
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 CKY--YSTAVDIWSLGCIFAEMVT 198
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ--DIYRASYYRKGGCAMLPVKWM 213
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 257
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 110/224 (49%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 239
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 240 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 283
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLG 176
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 CKY--YSTAVDIWSLGCIFAEMVT 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+ K+ + E + E+ +L ++H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 122 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 177
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 178 CKY--YSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+ K+ + E + E+ +L ++H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V +T V T Y PE
Sbjct: 121 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVVTLWYRAPEILLG 176
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 CKY--YSTAVDIWSLGCIFAEMVT 198
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 30/224 (13%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKM----DMQASKEFLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + Q +FL E +++ +H N+VR
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTR---LVGTFGYM 654
E+ +IHRDI N L+ AK+ DFG+A+ ++ AS + + + +M
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR--DIYRASYYRKGGCAMLPVKWM 227
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
PPE G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 271
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ + +L + + S + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 123 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 178
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 179 LGCKY--YSTAVDIWSLGCIFAEMVT 202
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 18/204 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHL 542
+F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 543 NLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+L+ E L+LV+E++ +L + + S + +GL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY--- 658
H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 123 HRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEILLG 178
Query: 659 AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 179 CKY--YSTAVDIWSLGCIFAEMVT 200
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 103/206 (50%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ + +L + + S + +GL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 121 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 176
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 177 LGCKY--YSTAVDIWSLGCIFAEMVT 200
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAK-LTEVGSASVHTRLVGTFGYMPP 656
E+ +IHRDI N L+ AK+ DFG+A+ + G + +MPP
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
E G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 297
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + S + +GL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 120 HSHRV---LHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 175
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 176 LGCKY--YSTAVDIWSLGCIFAEMVT 199
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 26/222 (11%)
Query: 498 IGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTHVHHLNLVR 546
+G G FG V+ ++ G + A+K + S++ FL E +++ +H N+VR
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 547 LIGYCVEG-SLFLVYEYIENGNLNQHLR-----GSGKDTLTWSARMQIALDSARGLEYIH 600
IG ++ F++ E + G+L LR S +L + +A D A G +Y+
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAK-LTEVGSASVHTRLVGTFGYMPP 656
E+ +IHRDI N L+ AK+ DFG+A+ + G + +MPP
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELISA--MEAVVKTNETITE 696
E G + K D ++FGV+L+E+ S M K+N+ + E
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 274
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ +L + S + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 123 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 178
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 179 LGCKY--YSTAVDIWSLGCIFAEMVT 202
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ + +L + S + +GL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 123 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 178
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 179 LGCKY--YSTAVDIWSLGCIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 18/206 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----FLAELKVLTHVH 540
+ +F KIG+G +G V+ A +L GE A+KK+ + E + E+ +L ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 541 HLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+V+L+ E L+LV+E++ + +L + S + +GL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
H H V +HRD+KP N+LI+ K+ADFGLA+ V + V T Y PE
Sbjct: 122 HSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVVTLWYRAPEIL 177
Query: 659 --AQYGEVSPKIDVYAFGVVLYELIS 682
+Y S +D+++ G + E+++
Sbjct: 178 LGCKY--YSTAVDIWSLGCIFAEMVT 201
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 17/193 (8%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFL-AELKVLTHVHHLNLVRLI-GY 550
KIG+G G V A +R G+ A+KKMD+ Q +E L E+ ++ H N+V + Y
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V E++E G L + + + +A + L + L +H V IHR
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGV---IHR 271
Query: 611 DIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVGTFGYMPPEYAQYGEVSPKI 668
DIK +IL+ + R K++DFG S V R LVGT +M PE P++
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 669 DVYAFGVVLYELI 681
D+++ G+++ E++
Sbjct: 329 DIWSLGIMVIEMV 341
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 45/304 (14%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGYCVEG- 554
+G+G +G V+ GE A+K + + + E ++ V H N++ I +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSR 75
Query: 555 ----SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV-----P 605
L+L+ Y E+G+L L+ + TL +++A+ +A GL ++H P
Sbjct: 76 NSSTQLWLITHYHEHGSLYDFLQ---RQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKP 132
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV---HTRLVGTFGYMPPEYAQYG 662
HRD K N+L+ N + +AD GLA + GS + + VGT YM PE
Sbjct: 133 AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQ 192
Query: 663 ------EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVA----LFEEVLRQPD 712
E D++AFG+VL+E+ A +V G+V F +V+
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEI--ARRTIV---------NGIVEDYRPPFYDVVPNDP 241
Query: 713 PREDLQRLV-----DPRLGDDYPIDSVRK-MARLARACTQENPQLRPSMRAIVVALMTLS 766
ED++++V P + + D V +A++ R C NP R + I L +S
Sbjct: 242 SFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKIS 301
Query: 767 SSSE 770
+S E
Sbjct: 302 NSPE 305
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 17/193 (8%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFL-AELKVLTHVHHLNLVRLI-GY 550
KIG+G G V A +R G+ A+KKMD+ Q +E L E+ ++ H N+V + Y
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V E++E G L + + + +A + L + L +H V IHR
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGV---IHR 149
Query: 611 DIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVGTFGYMPPEYAQYGEVSPKI 668
DIK +IL+ + R K++DFG S V R LVGT +M PE P++
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 669 DVYAFGVVLYELI 681
D+++ G+++ E++
Sbjct: 207 DIWSLGIMVIEMV 219
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 498 IGQGGFGAVFYAELRG--------EKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLI- 548
+G+GGFG VF +++ + + + + + E K+L VH +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDS--ARGLEYIHEHTVPV 606
+ + L LV + G++ H+ +D + I + GLE++H+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI-- 310
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPEYAQYGEVS 665
I+RD+KP N+L+D + +++D GLA E+ + T+ GT G+M PE E
Sbjct: 311 -IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 666 PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712
+D +A GV LYE+I+A E + + E+ + PD
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 31/212 (14%)
Query: 490 NDFSMGNKIGQGGFGAVF-------------YAELRGEKAAIKKMDMQASKEFLAELKVL 536
+ F + +GQG FG VF YA +KA +K D +K E +L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK---MERDIL 80
Query: 537 THVHHLNLVRL-IGYCVEGSLFLVYEYIENGNL----NQHLRGSGKDTLTWSARMQIALD 591
V+H +V+L + EG L+L+ +++ G+L ++ + + +D + A + +ALD
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
H H++ + I+RD+KP NIL+D+ K+ DFGL+K + ++ GT
Sbjct: 141 --------HLHSLGI-IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTV 190
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
YM PE + D ++FGV+++E+++
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 17/193 (8%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFL-AELKVLTHVHHLNLVRLI-GY 550
KIG+G G V A +R G+ A+KKMD+ Q +E L E+ ++ H N+V + Y
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V E++E G L + + + +A + L + L +H V IHR
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGV---IHR 151
Query: 611 DIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVGTFGYMPPEYAQYGEVSPKI 668
DIK +IL+ + R K++DFG S V R LVGT +M PE P++
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 669 DVYAFGVVLYELI 681
D+++ G+++ E++
Sbjct: 209 DIWSLGIMVIEMV 221
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 11/194 (5%)
Query: 492 FSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQAS-KEFLAELKVLTHVHHLNLVRLI 548
F + K+G+G +G+V+ A + G+ AIK++ +++ +E + E+ ++ ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 549 G-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
G Y L++V EY G+++ +R K TLT I + +GLEY+H
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDIIRLRNK-TLTEDEIATILQSTLKGLEYLHFMR---K 146
Query: 608 IHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSP 666
IHRDIK NIL++ AK+ADFG+A +LT+ + ++GT +M PE Q +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTD--XMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 667 KIDVYAFGVVLYEL 680
D+++ G+ E+
Sbjct: 205 VADIWSLGITAIEM 218
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 99/193 (51%), Gaps = 17/193 (8%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFL-AELKVLTHVHHLNLVRLI-GY 550
KIG+G G V A +R G+ A+KKMD+ Q +E L E+ ++ H N+V + Y
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V E++E G L + + + +A + L + L +H V IHR
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGV---IHR 140
Query: 611 DIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVGTFGYMPPEYAQYGEVSPKI 668
DIK +IL+ + R K++DFG S V R LVGT +M PE P++
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 669 DVYAFGVVLYELI 681
D+++ G+++ E++
Sbjct: 198 DIWSLGIMVIEMV 210
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 498 IGQGGFGAVFYAELRG--------EKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLI- 548
+G+GGFG VF +++ + + + + + E K+L VH +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDS--ARGLEYIHEHTVPV 606
+ + L LV + G++ H+ +D + I + GLE++H+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI-- 310
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPEYAQYGEVS 665
I+RD+KP N+L+D + +++D GLA E+ + T+ GT G+M PE E
Sbjct: 311 -IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 666 PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712
+D +A GV LYE+I+A E + + E+ + PD
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 498 IGQGGFGAVFYAELRG--------EKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLI- 548
+G+GGFG VF +++ + + + + + E K+L VH +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDS--ARGLEYIHEHTVPV 606
+ + L LV + G++ H+ +D + I + GLE++H+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI-- 310
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPEYAQYGEVS 665
I+RD+KP N+L+D + +++D GLA E+ + T+ GT G+M PE E
Sbjct: 311 -IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 666 PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712
+D +A GV LYE+I+A E + + E+ + PD
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 498 IGQGGFGAVFYAELRG--------EKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLI- 548
+G+GGFG VF +++ + + + + + E K+L VH +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDS--ARGLEYIHEHTVPV 606
+ + L LV + G++ H+ +D + I + GLE++H+ +
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI-- 310
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPEYAQYGEVS 665
I+RD+KP N+L+D + +++D GLA E+ + T+ GT G+M PE E
Sbjct: 311 -IYRDLKPENVLLDDDGNVRISDLGLA--VELKAGQTKTKGYAGTPGFMAPELLLGEEYD 367
Query: 666 PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712
+D +A GV LYE+I+A E + + E+ + PD
Sbjct: 368 FSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD 414
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFL-AELKVLTHVHHLNLVRLI-GY 550
KIG+G G V A +R G+ A+KKMD+ Q +E L E+ ++ H N+V + Y
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V E++E G L + + + +A + L + L +H V IHR
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGV---IHR 144
Query: 611 DIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVGTFGYMPPEYAQYGEVSPKI 668
DIK +IL+ + R K++DFG S V R LVGT +M PE P++
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 669 DVYAFGVVLYELISA 683
D+++ G+++ E++
Sbjct: 202 DIWSLGIMVIEMVDG 216
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 24/211 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD-----MQASKEFLAELKVLTHVHHL 542
+++ + IG G +G V A R G++ AIKK+ + +K L ELK+L H H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 543 NLVRL-------IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
N++ + + Y S+++V + +E+ +L+Q + S TL L RG
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL--LRG 171
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH---TRLVGTFG 652
L+Y+H V IHRD+KP+N+L+++N K+ DFG+A+ A T V T
Sbjct: 172 LKYMHSAQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 653 YMPPEYA-QYGEVSPKIDVYAFGVVLYELIS 682
Y PE E + ID+++ G + E+++
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 99/195 (50%), Gaps = 17/195 (8%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFL-AELKVLTHVHHLNLVRLI-GY 550
KIG+G G V A +R G+ A+KKMD+ Q +E L E+ ++ H N+V + Y
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L++V E++E G L + + + +A + L + L +H V IHR
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAA---VCLAVLQALSVLHAQGV---IHR 194
Query: 611 DIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVGTFGYMPPEYAQYGEVSPKI 668
DIK +IL+ + R K++DFG S V R LVGT +M PE P++
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQV---SKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 669 DVYAFGVVLYELISA 683
D+++ G+++ E++
Sbjct: 252 DIWSLGIMVIEMVDG 266
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 106/246 (43%), Gaps = 58/246 (23%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQASK--EFLAELKVLTHVHHL 542
+ +DF +GQG FG V A L AIKK+ K L+E+ +L ++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 543 NLVRLIGYCVE--------------GSLFLVYEYIENG---------NLNQHLRGSGKDT 579
+VR +E +LF+ EY ENG NLNQ +D
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ-----RDE 117
Query: 580 LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV- 638
W QI L YIH + IHRD+KP NI ID++ K+ DFGLAK
Sbjct: 118 Y-WRLFRQIL----EALSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 639 ------------GSASVHTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELI---- 681
GS+ T +GT Y+ E G + KID+Y+ G++ +E+I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFS 229
Query: 682 SAMEAV 687
+ ME V
Sbjct: 230 TGMERV 235
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 31/212 (14%)
Query: 490 NDFSMGNKIGQGGFGAVF-------------YAELRGEKAAIKKMDMQASKEFLAELKVL 536
+ F + +GQG FG VF YA +KA +K D +K E +L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK---MERDIL 81
Query: 537 THVHHLNLVRL-IGYCVEGSLFLVYEYIENGNL----NQHLRGSGKDTLTWSARMQIALD 591
V+H +V+L + EG L+L+ +++ G+L ++ + + +D + A + +ALD
Sbjct: 82 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 141
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
H H++ + I+RD+KP NIL+D+ K+ DFGL+K + ++ GT
Sbjct: 142 --------HLHSLGI-IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTV 191
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
YM PE + D ++FGV+++E+++
Sbjct: 192 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 106/212 (50%), Gaps = 31/212 (14%)
Query: 490 NDFSMGNKIGQGGFGAVF-------------YAELRGEKAAIKKMDMQASKEFLAELKVL 536
+ F + +GQG FG VF YA +KA +K D +K E +L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTK---MERDIL 80
Query: 537 THVHHLNLVRL-IGYCVEGSLFLVYEYIENGNL----NQHLRGSGKDTLTWSARMQIALD 591
V+H +V+L + EG L+L+ +++ G+L ++ + + +D + A + +ALD
Sbjct: 81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALD 140
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
H H++ + I+RD+KP NIL+D+ K+ DFGL+K + ++ GT
Sbjct: 141 --------HLHSLGI-IYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTV 190
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
YM PE + D ++FGV+++E+++
Sbjct: 191 EYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 496 NKIGQGGFGAVFYAELR--GEKAAIK-----KMDMQASKEFLAELKVLTHVHHLNLVRLI 548
KIG+G FG + G + IK +M + +E E+ VL ++ H N+V+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 549 GYCVE-GSLFLVYEYIENGNLNQHLRGSG------KDTLTWSARMQIALDSARGLEYIHE 601
E GSL++V +Y E G+L + + L W ++ +AL +++H+
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVHD 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY 661
+ +HRDIK NI + K+ ++ DFG+A++ + + +GT Y+ PE +
Sbjct: 144 RKI---LHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARACIGTPYYLSPEICEN 199
Query: 662 GEVSPKIDVYAFGVVLYELISAMEA 686
+ K D++A G VLYEL + A
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHA 224
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 24/211 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD-----MQASKEFLAELKVLTHVHHL 542
+++ + IG G +G V A R G++ AIKK+ + +K L ELK+L H H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 543 NLVRL-------IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
N++ + + Y S+++V + +E+ +L+Q + S TL L RG
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQL--LRG 170
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH---TRLVGTFG 652
L+Y+H V IHRD+KP+N+L+++N K+ DFG+A+ A T V T
Sbjct: 171 LKYMHSAQV---IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 653 YMPPEYA-QYGEVSPKIDVYAFGVVLYELIS 682
Y PE E + ID+++ G + E+++
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 103/204 (50%), Gaps = 20/204 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLN 543
++ + IG+G F V A L G + AIK +D + ++ E++++ ++H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 544 LVRLIGYC-VEGSLFLVYEYIENGNLNQHL--RGSGKDTLTWSARMQIALDSARGLEYIH 600
+V+L E +L+L+ EY G + +L G K+ S QI ++Y H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH 128
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ + +HRD+K N+L+D + K+ADFG + VG + T G+ Y PE Q
Sbjct: 129 QKRI---VHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDT-FCGSPPYAAPELFQ 183
Query: 661 YGEVS-PKIDVYAFGVVLYELISA 683
+ P++DV++ GV+LY L+S
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 27/297 (9%)
Query: 496 NKIGQGGFGAVFYAEL------RGEKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVR 546
+++G+G FG+V G A+K++ ++F E+++L +H +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 547 LIGYCV---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G SL LV EY+ +G L L+ + L S + + +G+EY+
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGT---FGYMPPEYAQ 660
+HRD+ NIL++ K+ADFGLAKL + R G F Y PE
Sbjct: 136 C---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLS 191
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720
S + DV++FGVVLYEL + + + G + R + E+ QRL
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRL 251
Query: 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSF 777
P ++ L + C +PQ RPS A+ L L S S + +F
Sbjct: 252 -------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAF 301
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 492 FSMGNKIGQGGFGAV--FYAELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNLV 545
+ M ++G GGFG V + + GE+ AIK+ + S + + E++++ ++H N+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 546 R-------LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIAL-DSARGLE 597
L L EY E G+L ++L ++ L D + L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 598 YIHEHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+HE+ + IHRD+KP NI++ + K+ D G AK E+ + T VGT Y+
Sbjct: 136 YLHENRI---IHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYL 190
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE + + + +D ++FG + +E I+
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-ELRGEK-AAIKKMDMQASKE------FLAELKVLTHVH 540
++ + +G +G GG V A +LR + A+K + +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 541 HLNLVRLI----GYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
H +V + G L ++V EY++ L + G +T +++ D+ +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHT-RLVGTFGY 653
L + H++ + IHRD+KPANILI KV DFG+A+ + + G++ T ++GT Y
Sbjct: 129 LNFSHQNGI---IHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQY 185
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ PE A+ V + DVY+ G VLYE+++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLN 543
++ + IG+G F V A L G + A+K +D + ++ E++++ ++H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 544 LVRLIGYC-VEGSLFLVYEYIENGNLNQHL--RGSGKDTLTWSARMQIALDSARGLEYIH 600
+V+L E +L+LV EY G + +L G K+ + QI ++Y H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH 131
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ + +HRD+K N+L+D + K+ADFG + VG+ G+ Y PE Q
Sbjct: 132 QKYI---VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKL--DTFCGSPPYAAPELFQ 186
Query: 661 YGEVS-PKIDVYAFGVVLYELISA 683
+ P++DV++ GV+LY L+S
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 492 FSMGNKIGQGGFGAV--FYAELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNLV 545
+ M ++G GGFG V + + GE+ AIK+ + S + + E++++ ++H N+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 546 R-------LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIAL-DSARGLE 597
L L EY E G+L ++L ++ L D + L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 598 YIHEHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+HE+ + IHRD+KP NI++ + K+ D G AK E+ + T VGT Y+
Sbjct: 137 YLHENRI---IHRDLKPENIVLQPGPQRLIHKIIDLGYAK--ELDQGELCTEFVGTLQYL 191
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE + + + +D ++FG + +E I+
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLN 543
++ + IG+G F V A L G + AIK +D + ++ E++++ ++H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 544 LVRLIGYC-VEGSLFLVYEYIENGNLNQHL--RGSGKDTLTWSARMQIALDSARGLEYIH 600
+V+L E +L+L+ EY G + +L G K+ S QI ++Y H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV----SAVQYCH 131
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ + +HRD+K N+L+D + K+ADFG + VG G Y PE Q
Sbjct: 132 QKRI---VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL--DAFCGAPPYAAPELFQ 186
Query: 661 YGEVS-PKIDVYAFGVVLYELISA 683
+ P++DV++ GV+LY L+S
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-ELRGEK-AAIKKMDMQASKE------FLAELKVLTHVH 540
++ + +G +G GG V A +LR + A+K + +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 541 HLNLVRLI----GYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
H +V + G L ++V EY++ L + G +T +++ D+ +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHT-RLVGTFGY 653
L + H++ + IHRD+KPANI+I KV DFG+A+ + + G++ T ++GT Y
Sbjct: 129 LNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ PE A+ V + DVY+ G VLYE+++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 27/297 (9%)
Query: 496 NKIGQGGFGAVFYAEL------RGEKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVR 546
+++G+G FG+V G A+K++ ++F E+++L +H +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 547 LIGYCV---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G SL LV EY+ +G L L+ + L S + + +G+EY+
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGT---FGYMPPEYAQ 660
+HRD+ NIL++ K+ADFGLAKL + R G F Y PE
Sbjct: 148 C---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLS 203
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720
S + DV++FGVVLYEL + + + G + R + E+ QRL
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL 263
Query: 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSF 777
P ++ L + C +PQ RPS A+ L L S S + +F
Sbjct: 264 -------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAF 313
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-ELRGEK-AAIKKMDMQASKE------FLAELKVLTHVH 540
++ + +G +G GG V A +LR + A+K + +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 541 HLNLVRLI----GYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
H +V + G L ++V EY++ L + G +T +++ D+ +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHT-RLVGTFGY 653
L + H++ + IHRD+KPANI+I KV DFG+A+ + + G++ T ++GT Y
Sbjct: 129 LNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ PE A+ V + DVY+ G VLYE+++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD----MQASKEFL-AELKVLTHVHHLN 543
D+ + IG G +G + G+ K++D +A K+ L +E+ +L + H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 544 LVRLIGYCVE---GSLFLVYEYIENGNLNQHLRGSGKDT--LTWSARMQIALDSARGLEY 598
+VR ++ +L++V EY E G+L + K+ L +++ L+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 599 IHE-----HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
H HTV +HRD+KPAN+ +D K+ DFGLA++ ++ T VGT Y
Sbjct: 127 CHRRSDGGHTV---LHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPYY 182
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISAM 684
M PE + K D+++ G +LYEL + M
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 14/196 (7%)
Query: 496 NKIGQGGFGAVFY--AELRGEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIG 549
+K+G+G + V+ ++L A+K++ ++ A + E+ +L + H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 550 YC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
E SL LV+EY++ +L Q+L G + ++ RGL Y H V +
Sbjct: 68 IIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKL-FLFQLLRGLAYCHRQKV---L 122
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE-YAQYGEVSPK 667
HRD+KP N+LI++ K+ADFGLA+ + + + +V T Y PP+ + S +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDYSTQ 181
Query: 668 IDVYAFGVVLYELISA 683
ID++ G + YE+ +
Sbjct: 182 IDMWGVGCIFYEMATG 197
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-ELRGEK-AAIKKMDMQASKE------FLAELKVLTHVH 540
++ + +G +G GG V A +LR + A+K + +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 541 HLNLVRLIGY----CVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
H +V + G L ++V EY++ L + G +T +++ D+ +
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHT-RLVGTFGY 653
L + H++ + IHRD+KPANI+I KV DFG+A+ + + G++ T ++GT Y
Sbjct: 129 LNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ PE A+ V + DVY+ G VLYE+++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 25/207 (12%)
Query: 492 FSMGNKIGQGGFGAVF-------------YAELRGEKAAIKKMDMQASKEFLAELKVLTH 538
F + +GQG FG VF YA +KA +K D +K E +L
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTK---MERDILAD 86
Query: 539 VHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIAL-DSARGL 596
V+H +V+L + EG L+L+ +++ G+L L K+ + ++ L + A GL
Sbjct: 87 VNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKFYLAELALGL 143
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
+++H + I+RD+KP NIL+D+ K+ DFGL+K + GT YM P
Sbjct: 144 DHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSK-EAIDHEKKAYSFCGTVEYMAP 199
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELISA 683
E S D +++GV+++E+++
Sbjct: 200 EVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-ELRGEK-AAIKKMDMQASKE------FLAELKVLTHVH 540
++ + +G +G GG V A +LR + A+K + +++ F E + ++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 541 HLNLVRLI----GYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
H +V + G L ++V EY++ L + G +T +++ D+ +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQA 128
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHT-RLVGTFGY 653
L + H++ + IHRD+KPANI+I KV DFG+A+ + + G++ T ++GT Y
Sbjct: 129 LNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 185
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ PE A+ V + DVY+ G VLYE+++
Sbjct: 186 LSPEQARGDSVDARSDVYSLGCVLYEVLT 214
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 127/297 (42%), Gaps = 27/297 (9%)
Query: 496 NKIGQGGFGAVFYAEL------RGEKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVR 546
+++G+G FG+V G A+K++ ++F E+++L +H +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 547 LIGYCV---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G SL LV EY+ +G L L+ + L S + + +G+EY+
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGT---FGYMPPEYAQ 660
+HRD+ NIL++ K+ADFGLAKL + R G F Y PE
Sbjct: 135 C---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLS 190
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720
S + DV++FGVVLYEL + + + G + R + E+ QRL
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRL 250
Query: 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSF 777
P ++ L + C +PQ RPS A+ L L S S + +F
Sbjct: 251 -------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETHAF 300
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 497 KIGQGGFGAVFYAELRGEK----AAIKKMDMQASK----EFLAELKVLTHVHHLNLVRLI 548
++G G FG+V R K AIK + K E + E +++ + + +VRLI
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
G C +L LV E G L++ L G ++ + S ++ + G++Y+ E ++
Sbjct: 77 GVCQAEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FV 132
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF--GYMPPEYAQYGEVSP 666
HRD+ N+L+ AK++DFGL+K + R G + + PE + + S
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 667 KIDVYAFGVVLYELIS 682
+ DV+++GV ++E +S
Sbjct: 193 RSDVWSYGVTMWEALS 208
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 498 IGQGGFGAVFYA------ELRGEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRL 547
+G G FG V+ E AIK ++ +A+ EF+ E ++ + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 548 IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
+G C+ ++ LV + + +G L +++ KD + + + A+G+ Y+ E +
Sbjct: 83 LGVCLSPTIQLVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLEERRL--- 138
Query: 608 IHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF--GYMPPEYAQYGEVS 665
+HRD+ N+L+ K+ DFGLA+L E G + G +M E Y + +
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLLE-GDEKEYNADGGKMPIKWMALECIHYRKFT 197
Query: 666 PKIDVYAFGVVLYELIS 682
+ DV+++GV ++EL++
Sbjct: 198 HQSDVWSYGVTIWELMT 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 105/246 (42%), Gaps = 58/246 (23%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQASK--EFLAELKVLTHVHHL 542
+ +DF +GQG FG V A L AIKK+ K L+E+ +L ++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 543 NLVRLIGYCVE--------------GSLFLVYEYIENG---------NLNQHLRGSGKDT 579
+VR +E +LF+ EY EN NLNQ +D
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ-----RDE 117
Query: 580 LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV- 638
W QI L YIH + IHRD+KP NI ID++ K+ DFGLAK
Sbjct: 118 Y-WRLFRQIL----EALSYIHSQGI---IHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 639 ------------GSASVHTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELI---- 681
GS+ T +GT Y+ E G + KID+Y+ G++ +E+I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFS 229
Query: 682 SAMEAV 687
+ ME V
Sbjct: 230 TGMERV 235
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 19/218 (8%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTH 538
K DF G +G+G F V A EL + AIK ++ + KE E V++
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 539 VHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARG 595
+ H V+L + + L+ Y +NG L +++R GS +T T +I
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 122
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYM 654
LEY+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+
Sbjct: 123 LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 179
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
PE D++A G ++Y+L++ + NE
Sbjct: 180 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 217
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 26/208 (12%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRG--EKAAIK--KMDMQASKE----FLAELKVLTHVHHL 542
DF+ +G+G FG V A+ +G E AIK K D+ + + E +VL +
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 543 NLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGK----DTLTWSARMQIALDSARGL 596
+ + C + L+ V EY+ G+L H++ GK + ++A + I GL
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GL 133
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMP 655
++H+ + I+RD+K N+++D K+ADFG+ K E V TR GT Y+
Sbjct: 134 FFLHKRGI---IYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPDYIA 188
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y +D +A+GV+LYE+++
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAG 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIG 549
KIG+G +G VF A+ R E A+K++ + E L E+ +L + H N+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 550 YC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ L LV+E+ + +L ++ D L +GL + H V +
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRNV---L 123
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV-SPK 667
HRD+KP N+LI++N K+ADFGLA+ + ++ V T Y PP+ ++ S
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 668 IDVYAFGVVLYELISAMEAVVKTNET 693
ID+++ G + EL +A + N+
Sbjct: 183 IDMWSAGCIFAELANAARPLFPGNDV 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 542 LNLVRLIGYCVEG--SLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLE 597
V+L +C + L+ Y +NG L +++R GS +T T +I LE
Sbjct: 97 PFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALE 151
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPP 656
Y+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ P
Sbjct: 152 YLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
E D++A G ++Y+L++ + NE +
Sbjct: 209 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 246
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 19/220 (8%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTH 538
K DF G +G+G F V A EL + AIK ++ + KE E V++
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 539 VHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARG 595
+ H V+L + + L+ Y +NG L +++R GS +T T +I
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 121
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYM 654
LEY+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+
Sbjct: 122 LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 178
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
PE D++A G ++Y+L++ + NE +
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 103/209 (49%), Gaps = 25/209 (11%)
Query: 491 DFSMGN-----KIGQGGFGAVFYAE--LRGEKAAIKKMDM-----QASKEFLAELKVLTH 538
D +GN IG+G F V A L G++ A+K +D + ++ E++++
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 539 VHHLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSARG 595
++H N+V+L E +L+LV EY G + +L G K+ + QI
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIV----SA 118
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
++Y H+ + +HRD+K N+L+D + K+ADFG + E + G+ Y
Sbjct: 119 VQYCHQKFI---VHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDTFCGSPPYAA 173
Query: 656 PEYAQYGEVS-PKIDVYAFGVVLYELISA 683
PE Q + P++DV++ GV+LY L+S
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLN 543
++ + IG+G F V A L G++ A+K +D + ++ E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 544 LVRLIGYC-VEGSLFLVYEYIENGNLNQHL--RGSGKDTLTWSARMQIALDSARGLEYIH 600
+V+L E +L+LV EY G + +L G K+ + QI ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH 130
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ + +HRD+K N+L+D + K+ADFG + E + G+ Y PE Q
Sbjct: 131 QKFI---VHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 661 YGEVS-PKIDVYAFGVVLYELISA 683
+ P++DV++ GV+LY L+S
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 100/197 (50%), Gaps = 17/197 (8%)
Query: 498 IGQGGFGAVFYA------ELRGEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRL 547
+G G FG V+ E AIK ++ +A+ EF+ E ++ + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 548 IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
+G C+ ++ LV + + +G L +++ KD + + + A+G+ Y+ E +
Sbjct: 106 LGVCLSPTIQLVTQLMPHGCLLEYVH-EHKDNIGSQLLLNWCVQIAKGMMYLEERRL--- 161
Query: 608 IHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF--GYMPPEYAQYGEVS 665
+HRD+ N+L+ K+ DFGLA+L E G + G +M E Y + +
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLLE-GDEKEYNADGGKMPIKWMALECIHYRKFT 220
Query: 666 PKIDVYAFGVVLYELIS 682
+ DV+++GV ++EL++
Sbjct: 221 HQSDVWSYGVTIWELMT 237
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLN 543
++ + IG+G F V A L G++ A+K +D + ++ E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 544 LVRLIGYC-VEGSLFLVYEYIENGNLNQHL--RGSGKDTLTWSARMQIALDSARGLEYIH 600
+V+L E +L+LV EY G + +L G K+ + QI ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH 130
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ + +HRD+K N+L+D + K+ADFG + E + G+ Y PE Q
Sbjct: 131 QKFI---VHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 661 YGEVS-PKIDVYAFGVVLYELISA 683
+ P++DV++ GV+LY L+S
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 123/290 (42%), Gaps = 27/290 (9%)
Query: 496 NKIGQGGFGAVFYAEL------RGEKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVR 546
+++G+G FG+V G A+K++ ++F E+++L +H +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 547 LIGYCV---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
G L LV EY+ +G L L+ + L S + + +G+EY+
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQ-RHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGT---FGYMPPEYAQ 660
+HRD+ NIL++ K+ADFGLAKL + R G F Y PE
Sbjct: 132 C---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA-PESLS 187
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720
S + DV++FGVVLYEL + + + G + R + E+ QRL
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRL 247
Query: 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770
P ++ L + C +PQ RPS A+ L L S S
Sbjct: 248 -------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 290
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 46/232 (19%)
Query: 490 NDFSMGNKIGQGGFGAVFYA---ELRGEKA----AIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A L+G A+K + AS ++ L+E VL
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 539 VHHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGK-------------------- 577
V+H ++++L G C + G L L+ EY + G+L LR S K
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 578 --DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635
LT + A ++G++Y+ E ++ +HRD+ NIL+ + + K++DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMSL---VHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI-----DVYAFGVVLYELIS 682
+ V + G +P ++ + I DV++FGV+L+E+++
Sbjct: 200 VYEEDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 16/212 (7%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKA--AIKKMDMQA------SKEFLAELKVL-THVH 540
+DF IG+G FG V A + E+ A+K + +A K ++E VL +V
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 541 HLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H LV L + L+ V +YI G L HL+ + L AR A + A L Y+
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAA-EIASALGYL 155
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
H + ++RD+KP NIL+D + DFGL K + S + GT Y+ PE
Sbjct: 156 HSLNI---VYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVL 211
Query: 660 QYGEVSPKIDVYAFGVVLYELISAMEAVVKTN 691
+D + G VLYE++ + N
Sbjct: 212 HKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN 243
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 19/218 (8%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTH 538
K DF G +G+G F V A EL + AIK ++ + KE E V++
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 539 VHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARG 595
+ H V+L + + L+ Y +NG L +++R GS +T T +I
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 119
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYM 654
LEY+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+
Sbjct: 120 LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 176
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
PE D++A G ++Y+L++ + NE
Sbjct: 177 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 214
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 19/220 (8%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTH 538
K DF G +G+G F V A EL + AIK ++ + KE E V++
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 539 VHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARG 595
+ H V+L + + L+ Y +NG L +++R GS +T T +I
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SA 120
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYM 654
LEY+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+
Sbjct: 121 LEYLHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 177
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
PE D++A G ++Y+L++ + NE +
Sbjct: 178 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 217
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIV----SALEY 147
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
S D++A G ++Y+L++ + NE
Sbjct: 205 LLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 117
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 118 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKA 170
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 21/211 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD----MQASKEFL-AELKVLTHVHHLN 543
D+ + IG G +G + G+ K++D +A K+ L +E+ +L + H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 544 LVRLIGYCVE---GSLFLVYEYIENGNLNQHLRGSGKDT--LTWSARMQIALDSARGLEY 598
+VR ++ +L++V EY E G+L + K+ L +++ L+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 599 IHE-----HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
H HTV +HRD+KPAN+ +D K+ DFGLA++ S VGT Y
Sbjct: 127 CHRRSDGGHTV---LHRDLKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKAFVGTPYY 182
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISAM 684
M PE + K D+++ G +LYEL + M
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRGE-------KAAIK----KMDMQASKEFLAELKVLTHV 539
+ G +G G FG V A G + A+K K D + ++ELK++T +
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 540 -HHLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGK-------------------- 577
H N+V L+G C + G ++L++EY G+L +LR +
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 578 -DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636
+ LT+ + A A+G+E++ + +HRD+ N+L+ K+ DFGLA+
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKSC---VHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 637 EVGSASV---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
S V + RL +M PE G + K DV+++G++L+E+ S
Sbjct: 223 MSDSNYVVRGNARL--PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 107/209 (51%), Gaps = 20/209 (9%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-ELRGEK-AAIKKMDMQASKE------FLAELKVLTHVH 540
++ + +G +G GG V A +LR + A+K + +++ F E + ++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 541 HLNLVRLI----GYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
H +V + G L ++V EY++ L + G +T +++ D+ +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQA 145
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASVHT-RLVGTFGY 653
L + H++ + IHRD+KPANI+I KV DFG+A+ + + G++ T ++GT Y
Sbjct: 146 LNFSHQNGI---IHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQY 202
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ PE A+ V + DVY+ G VLYE+++
Sbjct: 203 LSPEQARGDSVDARSDVYSLGCVLYEVLT 231
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLN 543
++ + IG+G F V A L G++ A++ +D + ++ E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 544 LVRLIGYC-VEGSLFLVYEYIENGNLNQHL--RGSGKDTLTWSARMQIALDSARGLEYIH 600
+V+L E +L+LV EY G + +L G K+ + QI ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH 130
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ + +HRD+K N+L+D + K+ADFG + E + G+ Y PE Q
Sbjct: 131 QKFI---VHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDEFCGSPPYAAPELFQ 185
Query: 661 YGEVS-PKIDVYAFGVVLYELISA 683
+ P++DV++ GV+LY L+S
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 134 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 133
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 134 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 186
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 187 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 42/211 (19%)
Query: 492 FSMGNKIGQGGFGAVFYA-ELR-GEKAAIKKMDMQASK------EFLAELKVLTHVHHLN 543
FS +IG G FGAV++A ++R E AIKKM + + + E++ L + H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR----MQIAL---DSARG 595
++ G Y E + +LV EY GS D L + ++IA + +G
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC---------LGSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT---RLVGTFG 652
L Y+H H + IHRD+K NIL+ ++ GL KL + GSAS+ VGT
Sbjct: 167 LAYLHSHNM---IHRDVKAGNILL--------SEPGLVKLGDFGSASIMAPANXFVGTPY 215
Query: 653 YMPPEY---AQYGEVSPKIDVYAFGVVLYEL 680
+M PE G+ K+DV++ G+ EL
Sbjct: 216 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 102/211 (48%), Gaps = 42/211 (19%)
Query: 492 FSMGNKIGQGGFGAVFYA-ELR-GEKAAIKKMDMQASK------EFLAELKVLTHVHHLN 543
FS +IG G FGAV++A ++R E AIKKM + + + E++ L + H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR----MQIAL---DSARG 595
++ G Y E + +LV EY GS D L + ++IA + +G
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC---------LGSASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT---RLVGTFG 652
L Y+H H + IHRD+K NIL+ ++ GL KL + GSAS+ VGT
Sbjct: 128 LAYLHSHNM---IHRDVKAGNILL--------SEPGLVKLGDFGSASIMAPANXFVGTPY 176
Query: 653 YMPPEY---AQYGEVSPKIDVYAFGVVLYEL 680
+M PE G+ K+DV++ G+ EL
Sbjct: 177 WMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 38/276 (13%)
Query: 492 FSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQASKEFLA----ELKVLTHVHHLNLV 545
F+ +IG+G FG VF + R ++ AIK +D++ +++ + E+ VL+ +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 546 RLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
+ G ++GS L+++ EY+ G+ LR D + ++ L +GL+Y+H
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSEK- 140
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
IHRDIK AN+L+ + K+ADFG+A +LT+ + VGT +M PE Q
Sbjct: 141 --KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIQQSA 196
Query: 664 VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723
K D+++ G+ EL K ++ + LF ++ + +P P
Sbjct: 197 YDSKADIWSLGITAIEL-------AKGEPPNSDMHPMRVLF--LIPKNNP---------P 238
Query: 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
L D+ + AC ++P RP+ + ++
Sbjct: 239 TLVGDF----TKSFKEFIDACLNKDPSFRPTAKELL 270
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLN 543
++ + IG+G F V A L G++ A+K +D + ++ E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 544 LVRLIGYC-VEGSLFLVYEYIENGNLNQHL--RGSGKDTLTWSARMQIALDSARGLEYIH 600
+V+L E +L+LV EY G + +L G K+ + QI ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH 130
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ + +HRD+K N+L+D + K+ADFG + E + G Y PE Q
Sbjct: 131 QKFI---VHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 661 YGEVS-PKIDVYAFGVVLYELISA 683
+ P++DV++ GV+LY L+S
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRL 547
NDFS+ IG+GGFG V+ G+ A+K +D + K E L L+LV
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS- 247
Query: 548 IGYC-----------VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI-ALDSARG 595
G C L + + + G+L+ HL G + A M+ A + G
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILG 304
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
LE++H V ++RD+KPANIL+D++ +++D GLA + H VGT GYM
Sbjct: 305 LEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS-VGTHGYMA 358
Query: 656 PEYAQYG-EVSPKIDVYAFGVVLYELI 681
PE Q G D ++ G +L++L+
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRL 547
NDFS+ IG+GGFG V+ G+ A+K +D + K E L L+LV
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS- 247
Query: 548 IGYC-----------VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI-ALDSARG 595
G C L + + + G+L+ HL G + A M+ A + G
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILG 304
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
LE++H V ++RD+KPANIL+D++ +++D GLA + H VGT GYM
Sbjct: 305 LEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS-VGTHGYMA 358
Query: 656 PEYAQYG-EVSPKIDVYAFGVVLYELI 681
PE Q G D ++ G +L++L+
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 46/232 (19%)
Query: 490 NDFSMGNKIGQGGFGAVFYA---ELRGEKA----AIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A L+G A+K + AS ++ L+E VL
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 539 VHHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGK-------------------- 577
V+H ++++L G C + G L L+ EY + G+L LR S K
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 578 --DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635
LT + A ++G++Y+ E + +HRD+ NIL+ + + K++DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI-----DVYAFGVVLYELIS 682
+ V + G +P ++ + I DV++FGV+L+E+++
Sbjct: 200 VYEEDSXVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 117
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 118 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 170
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 171 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 144/300 (48%), Gaps = 41/300 (13%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G VF + G A K + ++ + + EL+VL +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ +G+ ++ IA+ +GL Y+ E
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 142
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + S+ VGT YM PE Q
Sbjct: 143 HKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 195
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFE---EVLRQPDPREDL 717
S + D+++ G+ L E+ AV + I +G +A+FE ++ +P P
Sbjct: 196 GTHYSVQSDIWSMGLSLVEM-----AVGRY--PIGSGSGSMAIFELLDYIVNEPPP---- 244
Query: 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSF 777
+L ++ D V K C +NP R ++ ++V S +E+ D +
Sbjct: 245 -KLPSGVFSLEFQ-DFVNK-------CLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGW 295
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRL 547
NDFS+ IG+GGFG V+ G+ A+K +D + K E L L+LV
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS- 247
Query: 548 IGYC-----------VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI-ALDSARG 595
G C L + + + G+L+ HL G + A M+ A + G
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILG 304
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
LE++H V ++RD+KPANIL+D++ +++D GLA + H VGT GYM
Sbjct: 305 LEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS-VGTHGYMA 358
Query: 656 PEYAQYG-EVSPKIDVYAFGVVLYELI 681
PE Q G D ++ G +L++L+
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLL 385
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 113
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 114 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 166
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 472 ITVDKSVEFSYEELAKAT-NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE 528
I ++ +++ + E T N F +G+GGFG V ++R G+ A KK++ + K+
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 529 F------LAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLT 581
L E ++L V+ +V L Y + +L LV + G+L H+ G+
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
+ + A + GLE +H + ++RD+KP NIL+D + +++D GLA G
Sbjct: 285 EARAVFYAAEICCGLEDLHRERI---VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 340
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
++ R VGT GYM PE + + D +A G +LYE+I+ + + I
Sbjct: 341 TIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 111
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 112 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 164
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 165 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 20/204 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLN 543
++ + IG+G F V A L G++ A++ +D + ++ E++++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 544 LVRLIGYC-VEGSLFLVYEYIENGNLNQHL--RGSGKDTLTWSARMQIALDSARGLEYIH 600
+V+L E +L+LV EY G + +L G K+ + QI ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV----SAVQYCH 130
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ + +HRD+K N+L+D + K+ADFG + E + G+ Y PE Q
Sbjct: 131 QKFI---VHRDLKAENLLLDADMNIKIADFGFS--NEFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 661 YGEVS-PKIDVYAFGVVLYELISA 683
+ P++DV++ GV+LY L+S
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 99/207 (47%), Gaps = 25/207 (12%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRL 547
NDFS+ IG+GGFG V+ G+ A+K +D + K E L L+LV
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS- 246
Query: 548 IGYC-----------VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI-ALDSARG 595
G C L + + + G+L+ HL G + A M+ A + G
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILG 303
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
LE++H V ++RD+KPANIL+D++ +++D GLA + H VGT GYM
Sbjct: 304 LEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLA--CDFSKKKPHAS-VGTHGYMA 357
Query: 656 PEYAQYG-EVSPKIDVYAFGVVLYELI 681
PE Q G D ++ G +L++L+
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLL 384
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 131
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 132 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 184
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 185 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 97/196 (49%), Gaps = 14/196 (7%)
Query: 497 KIGQGGFGAVFYAELRGEK----AAIKKMDMQASK----EFLAELKVLTHVHHLNLVRLI 548
++G G FG+V R K AIK + K E + E +++ + + +VRLI
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 549 GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
G C +L LV E G L++ L G ++ + S ++ + G++Y+ E ++
Sbjct: 403 GVCQAEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FV 458
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF--GYMPPEYAQYGEVSP 666
HR++ N+L+ AK++DFGL+K + R G + + PE + + S
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 667 KIDVYAFGVVLYELIS 682
+ DV+++GV ++E +S
Sbjct: 519 RSDVWSYGVTMWEALS 534
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 123
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 124 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 176
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 177 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 148
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 149 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 475
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 476 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 137/299 (45%), Gaps = 33/299 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G VF + G A K + ++ + + EL+VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ +G+ ++ IA+ +GL Y+ E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + S+ VGT YM PE Q
Sbjct: 124 HKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 176
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVVKTN--ETITESTGLVALFEEVLRQPDPREDLQ 718
S + D+++ G+ L E+ + + E + L + ++ +P P+ L
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPK--LP 234
Query: 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSF 777
V D+ C +NP R ++ ++V S +E+ D +
Sbjct: 235 SGVFSLEFQDF-----------VNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGW 282
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 148
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 149 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 206 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 145
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 146 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 145
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 146 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 147
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 472 ITVDKSVEFSYEELAKAT-NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE 528
I ++ +++ + E T N F +G+GGFG V ++R G+ A KK++ + K+
Sbjct: 165 IYFNRFLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK 224
Query: 529 F------LAELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLT 581
L E ++L V+ +V L Y + +L LV + G+L H+ G+
Sbjct: 225 RKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
+ + A + GLE +H + ++RD+KP NIL+D + +++D GLA G
Sbjct: 285 EARAVFYAAEICCGLEDLHRERI---VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 340
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
++ R VGT GYM PE + + D +A G +LYE+I+ + + I
Sbjct: 341 TIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSAR 585
E LAE V+ + + +VR+IG C S LV E E G LN++L+ + KD
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 476
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645
Q+++ G++Y+ E ++HRD+ N+L+ AK++DFGL+K
Sbjct: 477 HQVSM----GMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 529
Query: 646 RLVGTF--GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ G + + PE Y + S K DV++FGV+++E S
Sbjct: 530 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 150
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 151 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 208 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 147
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
D++A G ++Y+L++ + NE +
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 147
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 145
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 146 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE 202
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G VF + G A K + ++ + + EL+VL +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ +G+ ++ IA+ +GL Y+ E
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 185
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + S+ VGT YM PE Q
Sbjct: 186 HKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 238
Query: 661 YGEVSPKIDVYAFGVVLYEL 680
S + D+++ G+ L E+
Sbjct: 239 GTHYSVQSDIWSMGLSLVEM 258
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 147
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 205 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 95/196 (48%), Gaps = 23/196 (11%)
Query: 498 IGQGGFGAVFYAELR--GEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G+G +G V + G AIKK D K + E+K+L + H NLV L+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 551 CVEGS-LFLVYEYIENGNLNQ-HLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
C + +LV+E++++ L+ L +G L + + G+ + H H + I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHSHNI---I 146
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY----AQYGEV 664
HRDIKP NIL+ ++ K+ DFG A+ T V+ V T Y PE +YG+
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFAR-TLAAPGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 665 SPKIDVYAFGVVLYEL 680
+DV+A G ++ E+
Sbjct: 206 ---VDVWAIGCLVTEM 218
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 109/232 (46%), Gaps = 46/232 (19%)
Query: 490 NDFSMGNKIGQGGFGAVFYA---ELRGEKA----AIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A L+G A+K + AS ++ L+E VL
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 539 VHHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGK-------------------- 577
V+H ++++L G C + G L L+ EY + G+L LR S K
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 578 --DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635
LT + A ++G++Y+ E + +HRD+ NIL+ + + K++DFGL++
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMKL---VHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI-----DVYAFGVVLYELIS 682
+ V + G +P ++ + I DV++FGV+L+E+++
Sbjct: 200 VYEEDSYVKR----SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 129
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 130 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 186
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
D++A G ++Y+L++ + NE +
Sbjct: 187 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 147
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 148 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
D++A G ++Y+L++ + NE +
Sbjct: 205 LLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGL 241
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 37/214 (17%)
Query: 498 IGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKV--LTHVHHLNLVRLI----GYC 551
IG+G +GAV+ L A+K + F+ E + + + H N+ R I
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVT 80
Query: 552 VEGSL--FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH------EHT 603
+G + LV EY NG+L ++L D W + ++A RGL Y+H +H
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYLSLHTSD---WVSSCRLAHSVTRGLAYLHTELPRGDHY 137
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLA-KLT--------EVGSASVHTRLVGTFGYM 654
P HRD+ N+L+ + ++DFGL+ +LT E +A++ VGT YM
Sbjct: 138 KPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE--VGTIRYM 195
Query: 655 PPEYAQYGEVS--------PKIDVYAFGVVLYEL 680
PE + G V+ ++D+YA G++ +E+
Sbjct: 196 APEVLE-GAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 21/211 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD----MQASKEFL-AELKVLTHVHHLN 543
D+ + IG G +G + G+ K++D +A K+ L +E+ +L + H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 544 LVRLIGYCVE---GSLFLVYEYIENGNLNQHLRGSGKDT--LTWSARMQIALDSARGLEY 598
+VR ++ +L++V EY E G+L + K+ L +++ L+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 599 IHE-----HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
H HTV +HRD+KPAN+ +D K+ DFGLA++ VGT Y
Sbjct: 127 CHRRSDGGHTV---LHRDLKPANVFLDGKQNVKLGDFGLARILN-HDEDFAKEFVGTPYY 182
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISAM 684
M PE + K D+++ G +LYEL + M
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 144
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 145 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 201
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
D++A G ++Y+L++ + NE +
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 19/217 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F V A EL + AIK ++ + KE E V++ + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 144
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 145 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 201
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
D++A G ++Y+L++ + NE +
Sbjct: 202 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYL 238
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 137/297 (46%), Gaps = 38/297 (12%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASK----EFLAELKVLTHVHH 541
+++ F K+G G + V+ + G A+K++ + + + + E+ ++ + H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 542 LNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLR----GSGKDTLTWSARMQIALDSARGL 596
N+VRL E L LV+E+++N +L +++ G+ L + +GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
+ HE+ + +HRD+KP N+LI+K + K+ DFGLA+ + + + +V T Y P
Sbjct: 122 AFCHENKI---LHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYRAP 177
Query: 657 EYAQYGEV-SPKIDVYAFGVVLYELISA----------------MEAVVKTNETITESTG 699
+ S ID+++ G +L E+I+ + + NE++ S
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237
Query: 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ + ++Q PR DL++++ P + P+D + Q NP +R S +
Sbjct: 238 KLPKYNPNIQQRPPR-DLRQVLQPHTKE--PLDG--NLMDFLHGLLQLNPDMRLSAK 289
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G VF + G A K + ++ + + EL+VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ +G+ ++ IA+ +GL Y+ E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + S+ VGT YM PE Q
Sbjct: 124 HKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 176
Query: 661 YGEVSPKIDVYAFGVVLYEL 680
S + D+++ G+ L E+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEM 196
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 491 DFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLN 543
++ + IG+G F V A L G++ A+K +D + ++ E+++ ++H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 544 LVRLIGYC-VEGSLFLVYEYIENGNLNQHL--RGSGKDTLTWSARMQIALDSARGLEYIH 600
+V+L E +L+LV EY G + +L G K+ + QI ++Y H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV----SAVQYCH 130
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ + +HRD+K N+L+D + K+ADFG + E + G Y PE Q
Sbjct: 131 QKFI---VHRDLKAENLLLDADXNIKIADFGFS--NEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 661 YGEVS-PKIDVYAFGVVLYELISA 683
+ P++DV++ GV+LY L+S
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 40/296 (13%)
Query: 488 ATNDFSMGNKIGQGGFGAVF---YAELRGEKAAI------KKMDMQASKEFLAELKVLTH 538
A D + +G+G FG V+ Y +GEK + K + ++F++E ++ +
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H ++V+LIG E +++ E G L +L K++L + +L + + Y
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAY 124
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE---VGSASVHTRLVGTFGYMP 655
+ +HRDI NIL+ K+ DFGL++ E ASV TRL +M
Sbjct: 125 LESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRL--PIKWMS 178
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE + + DV+ F V ++E++S K E+ ++ + E+ R P P
Sbjct: 179 PESINFRRFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGDRLPKP-- 232
Query: 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSED 771
L P L L C +P RP +V +L + +D
Sbjct: 233 ---DLCPPVL------------YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 273
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G VF + G A K + ++ + + EL+VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ +G+ ++ IA+ +GL Y+ E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + S+ VGT YM PE Q
Sbjct: 124 HKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 176
Query: 661 YGEVSPKIDVYAFGVVLYEL 680
S + D+++ G+ L E+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEM 196
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G VF + G A K + ++ + + EL+VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ +G+ ++ IA+ +GL Y+ E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + S+ VGT YM PE Q
Sbjct: 124 HKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 176
Query: 661 YGEVSPKIDVYAFGVVLYEL 680
S + D+++ G+ L E+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEM 196
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 40/296 (13%)
Query: 488 ATNDFSMGNKIGQGGFGAVF---YAELRGEKAAI------KKMDMQASKEFLAELKVLTH 538
A D + +G+G FG V+ Y +GEK + K + ++F++E ++ +
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H ++V+LIG E +++ E G L +L K++L + +L + + Y
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAY 128
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE---VGSASVHTRLVGTFGYMP 655
+ +HRDI NIL+ K+ DFGL++ E ASV TRL +M
Sbjct: 129 LESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRL--PIKWMS 182
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE + + DV+ F V ++E++S K E+ ++ + E+ R P P
Sbjct: 183 PESINFRRFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGDRLPKP-- 236
Query: 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSED 771
L P L L C +P RP +V +L + +D
Sbjct: 237 ---DLCPPVL------------YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 40/296 (13%)
Query: 488 ATNDFSMGNKIGQGGFGAVF---YAELRGEKAAI------KKMDMQASKEFLAELKVLTH 538
A D + +G+G FG V+ Y +GEK + K + ++F++E ++ +
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H ++V+LIG E +++ E G L +L K++L + +L + + Y
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAY 140
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE---VGSASVHTRLVGTFGYMP 655
+ +HRDI NIL+ K+ DFGL++ E ASV TRL +M
Sbjct: 141 LESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV-TRL--PIKWMS 194
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715
PE + + DV+ F V ++E++S K E+ ++ + E+ R P P
Sbjct: 195 PESINFRRFTTASDVWMFAVCMWEILS----FGKQPFFWLENKDVIGVLEKGDRLPKP-- 248
Query: 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSED 771
L P L L C +P RP +V +L + +D
Sbjct: 249 ---DLCPPVL------------YTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 289
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G VF + G A K + ++ + + EL+VL +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ +G+ ++ IA+ +GL Y+ E
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + S+ VGT YM PE Q
Sbjct: 124 HKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 176
Query: 661 YGEVSPKIDVYAFGVVLYEL 680
S + D+++ G+ L E+
Sbjct: 177 GTHYSVQSDIWSMGLSLVEM 196
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 34/242 (14%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRGEKAA-----IKKMDMQASKE---FLAELKVLTHVHHL 542
DF + IG+G FG V +L+ + K +M E F E VL +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 543 NLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLT------WSARMQIALDSARG 595
+ L + + +L+LV +Y G+L L +D L + A M IA+DS
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDL-LTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFG-LAKLTEVGSASVHTRLVGTFGYM 654
L Y+H RDIKP NIL+D N ++ADFG KL E G+ + VGT Y+
Sbjct: 194 LHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ-SSVAVGTPDYI 243
Query: 655 PPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709
PE Q G P+ D ++ GV +YE++ E++ E+ G + +E +
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYA--ESLVETYGKIMNHKERFQ 301
Query: 710 QP 711
P
Sbjct: 302 FP 303
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F IG G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G++ HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ KVADFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F IG G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G++ HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ KVADFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F IG G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ KVADFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIG 549
KIG+G +G VF A+ R E A+K++ + E L E+ +L + H N+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 550 YC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ L LV+E+ + +L ++ D L +GL + H V +
Sbjct: 69 VLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD-LDPEIVKSFLFQLLKGLGFCHSRNV---L 123
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV-SPK 667
HRD+KP N+LI++N K+A+FGLA+ + ++ V T Y PP+ ++ S
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVVTLWYRPPDVLFGAKLYSTS 182
Query: 668 IDVYAFGVVLYELISAMEAVVKTNET 693
ID+++ G + EL +A + N+
Sbjct: 183 IDMWSAGCIFAELANAGRPLFPGNDV 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 18/200 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G VF + G A K + ++ + + EL+VL +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ +G+ ++ IA+ +GL Y+ E
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 150
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + S+ VGT YM PE Q
Sbjct: 151 HKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQ 203
Query: 661 YGEVSPKIDVYAFGVVLYEL 680
S + D+++ G+ L E+
Sbjct: 204 GTHYSVQSDIWSMGLSLVEM 223
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 106/200 (53%), Gaps = 26/200 (13%)
Query: 498 IGQGGFGAVFYAELRG--EKAAIKKMDMQASKEF--------LAELKVLTHVHHLNLVRL 547
+G+G F V+ A + + AIKK+ + E L E+K+L + H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 548 I-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+ + + ++ LV++++E +L ++ + LT S L + +GLEY+H+H +
Sbjct: 78 LDAFGHKSNISLVFDFMET-DLEVIIKDNSL-VLTPSHIKAYMLMTLQGLEYLHQHWI-- 133
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEY----AQY 661
+HRD+KP N+L+D+N K+ADFGLAK GS + + V T Y PE Y
Sbjct: 134 -LHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQVVTRWYRAPELLFGARMY 190
Query: 662 GEVSPKIDVYAFGVVLYELI 681
G +D++A G +L EL+
Sbjct: 191 GV---GVDMWAVGCILAELL 207
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 100/215 (46%), Gaps = 19/215 (8%)
Query: 490 NDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQ-ASKE-----FLAELKVLTHVHH 541
DF G +G+G F A EL + AIK ++ + KE E V++ + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEY 598
V+L + + L+ Y +NG L +++R GS +T T +I LEY
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV----SALEY 145
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTFGYMPPE 657
+H + IHRD+KP NIL++++ ++ DFG AK+ S VGT Y+ PE
Sbjct: 146 LHGKGI---IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 202
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
D++A G ++Y+L++ + NE
Sbjct: 203 LLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 25/228 (10%)
Query: 492 FSMGNKIGQGGFGAVFYAE-LRGEK-AAIKKMDMQA--SKE--FLAELKVLTHVHHLNLV 545
+ + +G G F V AE R +K AIK + +A KE E+ VL + H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 546 RLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
L Y G L+L+ + + G L + G T ++R+ + A ++Y+H+ +
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHDLGI 137
Query: 605 PVYIHRDIKPANIL---IDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY 661
+HRD+KP N+L +D++ + ++DFGL+K+ + GS V + GT GY+ PE
Sbjct: 138 ---VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPEVLAQ 192
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709
S +D ++ GV+ Y L+ N+ LFE++L+
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--------KLFEQILK 232
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 33/215 (15%)
Query: 498 IGQGGFG-AVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVH-HLNLVRLIGYCVEGS 555
+G G G VF +G A+K+M + L E+K+LT H N++R YC E +
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETT 80
Query: 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI-----HEHTVPVYIHR 610
+Y +E NLN K+ + ++Q + L I H H++ + IHR
Sbjct: 81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI-IHR 139
Query: 611 DIKPANILID-------------KNFRAKVADFGLAKLTEVGSASVHTRL---VGTFGYM 654
D+KP NIL+ +N R ++DFGL K + G +S T L GT G+
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWR 199
Query: 655 PPEYAQYG-------EVSPKIDVYAFGVVLYELIS 682
PE + ++ ID+++ G V Y ++S
Sbjct: 200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 492 FSMGNKIGQGGFGAVFY---------AELRGEKAAIKKMDMQASKEFL---AELKVLTHV 539
F + +G+GG+G VF ++ K K M ++ +K+ AE +L V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 540 HHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSG---KDTLT-WSARMQIALDSAR 594
H +V LI + G L+L+ EY+ G L L G +DT + A + +AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--- 135
Query: 595 GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
++H+ + I+RD+KP NI+++ K+ DFGL K + HT GT YM
Sbjct: 136 ---HLHQKGI---IYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-FCGTIEYM 188
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT 695
PE + +D ++ G ++Y++++ N T
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT 229
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 491 DFSMGNKIGQGGFGAV--FYAELRGEKAAIK--------KMDMQASKEF-LAELKVLTHV 539
++ + +G+G FG V Y G+K A+K K DMQ E ++ L++L H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H + L +I + + +V EY N + ++ +D ++ + +EY
Sbjct: 74 HIIKLYDVIKS--KDEIIMVIEYAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYC 128
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
H H + +HRD+KP N+L+D++ K+ADFGL+ + G+ + G+ Y PE
Sbjct: 129 HRHKI---VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI 183
Query: 660 QYGEV--SPKIDVYAFGVVLYELI 681
G++ P++DV++ GV+LY ++
Sbjct: 184 S-GKLYAGPEVDVWSCGVILYVML 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 491 DFSMGNKIGQGGFGAV--FYAELRGEKAAIK--------KMDMQASKEF-LAELKVLTHV 539
++ + +G+G FG V Y G+K A+K K DMQ E ++ L++L H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H + L +I + + +V EY N + ++ +D ++ + +EY
Sbjct: 75 HIIKLYDVIKS--KDEIIMVIEYAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYC 129
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
H H + +HRD+KP N+L+D++ K+ADFGL+ + G+ + G+ Y PE
Sbjct: 130 HRHKI---VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI 184
Query: 660 QYGEV--SPKIDVYAFGVVLYELI 681
G++ P++DV++ GV+LY ++
Sbjct: 185 S-GKLYAGPEVDVWSCGVILYVML 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 491 DFSMGNKIGQGGFGAV--FYAELRGEKAAIK--------KMDMQASKEF-LAELKVLTHV 539
++ + +G+G FG V Y G+K A+K K DMQ E ++ L++L H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H + L +I + + +V EY N + ++ +D ++ + +EY
Sbjct: 65 HIIKLYDVIKS--KDEIIMVIEYAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYC 119
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
H H + +HRD+KP N+L+D++ K+ADFGL+ + G+ + G+ Y PE
Sbjct: 120 HRHKI---VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI 174
Query: 660 QYGEV--SPKIDVYAFGVVLYELI 681
G++ P++DV++ GV+LY ++
Sbjct: 175 S-GKLYAGPEVDVWSCGVILYVML 197
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 25/222 (11%)
Query: 498 IGQGGFGAVFYAE-LRGEK-AAIKKMDMQA--SKE--FLAELKVLTHVHHLNLVRLIG-Y 550
+G G F V AE R +K AIK + +A KE E+ VL + H N+V L Y
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
G L+L+ + + G L + G T ++R+ + A ++Y+H+ + +HR
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHDLGI---VHR 140
Query: 611 DIKPANIL---IDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPK 667
D+KP N+L +D++ + ++DFGL+K+ + GS V + GT GY+ PE S
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPEVLAQKPYSKA 198
Query: 668 IDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709
+D ++ GV+ Y L+ N+ LFE++L+
Sbjct: 199 VDCWSIGVIAYILLCGYPPFYDENDA--------KLFEQILK 232
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 25/228 (10%)
Query: 492 FSMGNKIGQGGFGAVFYAE-LRGEK-AAIKKMDMQA--SKE--FLAELKVLTHVHHLNLV 545
+ + +G G F V AE R +K AIK + +A KE E+ VL + H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 546 RLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
L Y G L+L+ + + G L + G T ++R+ + A ++Y+H+ +
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHDLGI 137
Query: 605 PVYIHRDIKPANIL---IDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY 661
+HRD+KP N+L +D++ + ++DFGL+K+ + GS V + GT GY+ PE
Sbjct: 138 ---VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPEVLAQ 192
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709
S +D ++ GV+ Y L+ N+ LFE++L+
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--------KLFEQILK 232
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 24/210 (11%)
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQ--HLRGSGKDTLTWSARMQ 587
+A LK L H + + LV ++ E L++V+E + G + + L+ +D AR
Sbjct: 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSED----QARFY 142
Query: 588 IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL 647
D +G+EY+H + IHRDIKP+N+L+ ++ K+ADFG++ + GS ++ +
Sbjct: 143 FQ-DLIKGIEYLHYQKI---IHRDIKPSNLLVGEDGHIKIADFGVSNEFK-GSDALLSNT 197
Query: 648 VGTFGYMPPE-YAQYGEV--SPKIDVYAFGVVLYELISA----MEAVVKTNETITESTGL 700
VGT +M PE ++ ++ +DV+A GV LY + M+ + + +S L
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQAL 257
Query: 701 VALFEEVLRQPDPREDLQRLVDPRLGDDYP 730
E QPD EDL+ L+ R+ D P
Sbjct: 258 -----EFPDQPDIAEDLKDLIT-RMLDKNP 281
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 27/221 (12%)
Query: 492 FSMGNKIGQGGFGAVFY---------AELRGEKAAIKKMDMQASKEFL---AELKVLTHV 539
F + +G+GG+G VF ++ K K M ++ +K+ AE +L V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 540 HHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSG---KDTLT-WSARMQIALDSAR 594
H +V LI + G L+L+ EY+ G L L G +DT + A + +AL
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG--- 135
Query: 595 GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
++H+ + I+RD+KP NI+++ K+ DFGL K + +V GT YM
Sbjct: 136 ---HLHQKGI---IYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGTVTHXFCGTIEYM 188
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT 695
PE + +D ++ G ++Y++++ N T
Sbjct: 189 APEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 112/228 (49%), Gaps = 25/228 (10%)
Query: 492 FSMGNKIGQGGFGAVFYAE-LRGEK-AAIKKMDMQA--SKE--FLAELKVLTHVHHLNLV 545
+ + +G G F V AE R +K AIK + +A KE E+ VL + H N+V
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 546 RLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
L Y G L+L+ + + G L + G T ++R+ + A ++Y+H+ +
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA--VKYLHDLGI 137
Query: 605 PVYIHRDIKPANIL---IDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY 661
+HRD+KP N+L +D++ + ++DFGL+K+ + GS V + GT GY+ PE
Sbjct: 138 ---VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS--VLSTACGTPGYVAPEVLAQ 192
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709
S +D ++ GV+ Y L+ N+ LFE++L+
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--------KLFEQILK 232
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 30/239 (12%)
Query: 482 YEELAKATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMD-------MQASKEFLAE 532
Y+EL K + + IG GGF V A L GE AIK MD + K +
Sbjct: 5 YDELLKY---YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEA 61
Query: 533 LKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDS 592
LK L H H L ++ +F+V EY G L ++ +D L+ +
Sbjct: 62 LKNLRHQHICQLYHVLE--TANKIFMVLEYCPGGELFDYI--ISQDRLSEEETRVVFRQI 117
Query: 593 ARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-LVGTF 651
+ Y+H Y HRD+KP N+L D+ + K+ DFGL + G+ H + G+
Sbjct: 118 VSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPK-GNKDYHLQTCCGSL 173
Query: 652 GYMPPEYAQ-YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709
Y PE Q + + DV++ G++LY L+ N ++AL+++++R
Sbjct: 174 AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--------VMALYKKIMR 224
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 99/236 (41%), Gaps = 54/236 (22%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQASK--EFLAELKVLTHVHHL 542
+ +DF +GQG FG V A L AIKK+ K L+E+ +L ++H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 543 NLVRLIGYCVE--------------GSLFLVYEYIENG---------NLNQHLRGSGKDT 579
+VR +E +LF+ EY EN NLNQ +D
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ-----RDE 117
Query: 580 LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV- 638
W QI L YIH + IHR++KP NI ID++ K+ DFGLAK
Sbjct: 118 Y-WRLFRQIL----EALSYIHSQGI---IHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
Query: 639 ------------GSASVHTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELI 681
GS+ T +GT Y+ E G + KID Y+ G++ +E I
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 24/204 (11%)
Query: 491 DFSMGNKIGQGGFGAV--FYAELRGEKAAIK--------KMDMQASKEF-LAELKVLTHV 539
++ + +G+G FG V Y G+K A+K K DMQ E ++ L++L H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H + L +I + + +V EY N + ++ +D ++ + +EY
Sbjct: 69 HIIKLYDVIKS--KDEIIMVIEYAGNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYC 123
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
H H + +HRD+KP N+L+D++ K+ADFGL+ + G+ + G+ Y PE
Sbjct: 124 HRHKI---VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVI 178
Query: 660 QYGEV--SPKIDVYAFGVVLYELI 681
G++ P++DV++ GV+LY ++
Sbjct: 179 S-GKLYAGPEVDVWSCGVILYVML 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 497 KIGQGGFGAVFYAELR-GEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIGY 550
KIG+G +G V+ A+ GE A+KK+ ++ E + E+ +L + H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 551 C-VEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
+ L LV+E+++ +L + L G +++T + + L G+ Y H+ V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCHDRRV--- 121
Query: 608 IHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ-YGEVSP 666
+HRD+KP N+LI++ K+ADFGLA+ + +T V T Y P+ + S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 667 KIDVYAFGVVLYELISA 683
ID+++ G + E+++
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 176
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + + L GT Y+ PE
Sbjct: 177 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT----LCGTPEYLAPE 229
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 498 IGQGGFGAVFYAELRGEKAAIK-------------KMDMQASKEFLAELKVLTHVHHLNL 544
+G G FG V E +IK + QA + + + L H H +
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH---I 95
Query: 545 VRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
VRL+G C SL LV +Y+ G+L H+R + L + + A+G+ Y+ EH +
Sbjct: 96 VRLLGLCPGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGM 154
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGE 663
+HR++ N+L+ + +VADFG+A L +++ +M E +G+
Sbjct: 155 ---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ + DV+++GV ++EL++
Sbjct: 212 YTHQSDVWSYGVTVWELMT 230
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 497 KIGQGGFGAVFYAELR-GEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIGY 550
KIG+G +G V+ A+ GE A+KK+ ++ E + E+ +L + H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 551 C-VEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
+ L LV+E+++ +L + L G +++T + + L G+ Y H+ V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCHDRRV--- 121
Query: 608 IHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ-YGEVSP 666
+HRD+KP N+LI++ K+ADFGLA+ + +T V T Y P+ + S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEVVTLWYRAPDVLMGSKKYST 180
Query: 667 KIDVYAFGVVLYELISA 683
ID+++ G + E+++
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 135 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 187
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 134
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 135 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 187
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Query: 468 GVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM 521
G GI ++ + + K T +F +G G FG V+ GEK AIK++
Sbjct: 1 GAMGIRSGEAPNQALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL 59
Query: 522 ----DMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGK 577
+A+KE L E V+ V + ++ RL+G C+ ++ L+ + + G L ++R K
Sbjct: 60 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHK 118
Query: 578 DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637
D + + + A+G+ Y+ + + +HRD+ N+L+ K+ DFGLAKL
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKI-----DVYAFGVVLYELIS 682
H G +P ++ + +I DV+++GV ++EL++
Sbjct: 176 AEEKEYHAE----GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 138 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 190
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 75 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 134 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 186
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 498 IGQGGFGAVFYAELRGEKAAIK-------------KMDMQASKEFLAELKVLTHVHHLNL 544
+G G FG V E +IK + QA + + + L H H +
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAH---I 77
Query: 545 VRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
VRL+G C SL LV +Y+ G+L H+R + L + + A+G+ Y+ EH +
Sbjct: 78 VRLLGLCPGSSLQLVTQYLPLGSLLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGM 136
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGE 663
+HR++ N+L+ + +VADFG+A L +++ +M E +G+
Sbjct: 137 ---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 664 VSPKIDVYAFGVVLYELIS 682
+ + DV+++GV ++EL++
Sbjct: 194 YTHQSDVWSYGVTVWELMT 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G VF + G A K + ++ + + EL+VL +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ +G+ ++ IA+ +GL Y+ E
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAV--IKGLTYLREK 126
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + + VGT YM PE Q
Sbjct: 127 HKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----EMANEFVGTRSYMSPERLQ 179
Query: 661 YGEVSPKIDVYAFGVVLYEL 680
S + D+++ G+ L E+
Sbjct: 180 GTHYSVQSDIWSMGLSLVEM 199
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 134 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 186
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 497 KIGQGGFGAVFYAELR-GEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIGY 550
KIG+G +G V+ A+ GE A+KK+ ++ E + E+ +L + H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 551 C-VEGSLFLVYEYIENGNLNQHLR--GSGKDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
+ L LV+E+++ +L + L G +++T + + L G+ Y H+ V
Sbjct: 69 IHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCHDRRV--- 121
Query: 608 IHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ-YGEVSP 666
+HRD+KP N+LI++ K+ADFGLA+ + +T + T Y P+ + S
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGI-PVRKYTHEIVTLWYRAPDVLMGSKKYST 180
Query: 667 KIDVYAFGVVLYELISA 683
ID+++ G + E+++
Sbjct: 181 TIDIWSVGCIFAEMVNG 197
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 137 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 189
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 136 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 188
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDMQ--------ASKEFLAELKVLTHV 539
+F +G G FG V+ GEK I M+ A+KE L E V+ V
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 109 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 167
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 168 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWM 220
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 33/221 (14%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTH 538
N+ G +G G FG V A G K A+K + A + ++ELK+++H
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 539 V-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGK------------DTLTWSA 584
+ H N+V L+G C G + ++ EY G+L LR + TL+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV- 643
+ + A+G+ ++ IHRD+ N+L+ AK+ DFGLA+ S +
Sbjct: 166 LLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 644 --HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ RL +M PE + + DV+++G++L+E+ S
Sbjct: 223 KGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 81 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 139
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 140 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 192
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 100 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 158
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 159 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 211
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 134 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 186
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 134 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 186
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 69 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 127
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 128 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWM 180
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 136 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 188
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 113/236 (47%), Gaps = 21/236 (8%)
Query: 492 FSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQA--SKEFLAELKVLT-HVHHLNLVR 546
F + +G G +G V+ G+ AAIK MD+ +E E+ +L + HH N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 547 LIGYCV-------EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
G + + L+LV E+ G++ ++ + +TL I + RGL ++
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
H+H V IHRDIK N+L+ +N K+ DFG++ + +T +GT +M PE
Sbjct: 146 HQHKV---IHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-FIGTPYWMAPEVI 201
Query: 660 QYGEVSPKIDVYAFGVVLYEL-ISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714
E +P Y F L+ L I+A+E + + + + + ALF + R P PR
Sbjct: 202 ACDE-NPDA-TYDFKSDLWSLGITAIE-MAEGAPPLCDMHPMRALF-LIPRNPAPR 253
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF----LAELKVLTHVHHL 542
++DF + + +G+G +G V A + GE AIKK++ F L E+K+L H H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 543 NLVRLIGYCVEGSLFLVYE-YIENGNLNQHLRGSGKDTLTWSARMQIAL-DSARGLEYIH 600
N++ + S E YI + L + +Q + + R ++ +H
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE---------VGSASVHTRLVGTF 651
V IHRD+KP+N+LI+ N KV DFGLA++ + G S T V T
Sbjct: 130 GSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 652 GYMPPEYA-QYGEVSPKIDVYAFGVVLYEL 680
Y PE + S +DV++ G +L EL
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 85 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 143
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 144 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWM 196
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 137 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 189
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF----LAELKVLTHVHHL 542
++DF + + +G+G +G V A + GE AIKK++ F L E+K+L H H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 543 NLVRLIGYCVEGSLFLVYE-YIENGNLNQHLRGSGKDTLTWSARMQIAL-DSARGLEYIH 600
N++ + S E YI + L + +Q + + R ++ +H
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE---------VGSASVHTRLVGTF 651
V IHRD+KP+N+LI+ N KV DFGLA++ + G S T V T
Sbjct: 130 GSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR 186
Query: 652 GYMPPEYA-QYGEVSPKIDVYAFGVVLYEL 680
Y PE + S +DV++ G +L EL
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 137 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 189
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LAGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 78 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 136
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 137 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 189
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 118/271 (43%), Gaps = 33/271 (12%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIK---KMDMQASKE---FLAELK 534
+E+ +DF + IG+G F V +++ G+ A+K K DM E F E
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 535 VLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSA 593
VL + + +L + E L+LV EY G+L L G+ AR +A +
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLA-EIV 172
Query: 594 RGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
++ +H Y+HRDIKP NIL+D+ ++ADFG VGT Y
Sbjct: 173 MAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDY 229
Query: 654 MPPEYAQ-------YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706
+ PE Q G P+ D +A GV YE+ ++ E+ G + ++E
Sbjct: 230 LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA--DSTAETYGKIVHYKE 287
Query: 707 VLRQP--------DPREDLQRLVDP---RLG 726
L P + R+ +QRL+ P RLG
Sbjct: 288 HLSLPLVDEGVPEEARDFIQRLLCPPETRLG 318
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 46/288 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK-----AAIKKMDMQASKE---FLAELK 534
+E+ DF + IG+G FG V +++ + + K +M E F E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 535 VLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLT------WSARMQ 587
VL + + L + E L+LV +Y G+L L +D L + M
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMV 201
Query: 588 IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFG-LAKLTEVGSASVHTR 646
+A+DS L Y+H RDIKP N+L+D N ++ADFG K+ + G+ +
Sbjct: 202 LAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ-SSV 251
Query: 647 LVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701
VGT Y+ PE Q G+ P+ D ++ GV +YE++ E++ E+ G +
Sbjct: 252 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA--ESLVETYGKI 309
Query: 702 ALFEEVLRQP--------DPREDLQRLV---DPRLGDDYPIDSVRKMA 738
EE + P + ++ +QRL+ + RLG + I+ +K A
Sbjct: 310 MNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQN-GIEDFKKHA 356
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 26/226 (11%)
Query: 471 GITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYA-------ELRGEKAAIKKMDM 523
G + + EF K ++++ + ++G+G F V E + KK+
Sbjct: 10 GQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA 69
Query: 524 QASKEFLAELKVLTHVHHLNLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRG----SGKD 578
+ ++ E ++ + H N+VRL E S +LV++ + G L + + S D
Sbjct: 70 RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD 129
Query: 579 TLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKL 635
S +Q L+S + Y H + + +HR++KP N+L+ K K+ADFGLA
Sbjct: 130 A---SHCIQQILES---IAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLA-- 178
Query: 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681
EV + GT GY+ PE + S +D++A GV+LY L+
Sbjct: 179 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 224
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 52/234 (22%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAV--------FYAELRGEKAAI-KKMDMQASK------ 527
+E K ND+ + + QG F + FYA + EK+ + KK D S
Sbjct: 24 KEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISI 83
Query: 528 -----EFLAELKVLTHVHHLNLVRLIGYCV--EG------SLFLVYEYIENGNL---NQH 571
+F EL+++T + + YC+ EG ++++YEY+EN ++ +++
Sbjct: 84 KSKYDDFKNELQIITDIKN-------EYCLTCEGIITNYDEVYIIYEYMENDSILKFDEY 136
Query: 572 LRGSGKDTLTW---SARMQIALDSARGLEYIH-EHTVPVYIHRDIKPANILIDKNFRAKV 627
K+ + I YIH E + HRD+KP+NIL+DKN R K+
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI---CHRDVKPSNILMDKNGRVKL 193
Query: 628 ADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS---PKIDVYAFGVVLY 678
+DFG ++ V +R GT+ +MPPE+ E S K+D+++ G+ LY
Sbjct: 194 SDFGESEYM-VDKKIKGSR--GTYEFMPPEFFS-NESSYNGAKVDIWSLGICLY 243
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 496 NKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
++G+ FG V+ L G + AIK + +A +EF E + + H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 545 VRLIGYCVEGS-LFLVYEYIENGNLNQHLR--------GSGKDTLTWSARMQ------IA 589
V L+G + L +++ Y +G+L++ L GS D T + ++ +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG 649
A G+EY+ H V +H+D+ N+L+ K++D GL + EV +A + +L+G
Sbjct: 135 AQIAAGMEYLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFR--EVYAADYY-KLLG 188
Query: 650 T----FGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+M PE YG+ S D++++GVVL+E+ S
Sbjct: 189 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 148
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 149 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 201
Query: 658 YAQYGEVSPKIDVYAFGVVLYEL 680
+ +D +A GV++YE+
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEM 224
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 494 MGNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
+G IG+G FG V E AIK S ++FL E + H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 545 VRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
V+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 74 VKLIGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR- 131
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
++HRDI N+L+ N K+ DFGL++ E + ++ +M PE +
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 665 SPKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
+ DV+ FGV ++E++ M V VK N+ I
Sbjct: 190 TSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 222
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 129/288 (44%), Gaps = 46/288 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK-----AAIKKMDMQASKE---FLAELK 534
+E+ DF + IG+G FG V +++ + + K +M E F E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 535 VLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLT------WSARMQ 587
VL + + L + E L+LV +Y G+L L +D L + M
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMV 185
Query: 588 IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFG-LAKLTEVGSASVHTR 646
+A+DS L Y+H RDIKP N+L+D N ++ADFG K+ + G+ +
Sbjct: 186 LAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ-SSV 235
Query: 647 LVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701
VGT Y+ PE Q G+ P+ D ++ GV +YE++ E++ E+ G +
Sbjct: 236 AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA--ESLVETYGKI 293
Query: 702 ALFEEVLRQP--------DPREDLQRLV---DPRLGDDYPIDSVRKMA 738
EE + P + ++ +QRL+ + RLG + I+ +K A
Sbjct: 294 MNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQN-GIEDFKKHA 340
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 142
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 143 YLHSLDL---IYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 195
Query: 658 YAQYGEVSPKIDVYAFGVVLYEL 680
+ +D +A GV++YE+
Sbjct: 196 IILSKGYNKAVDWWALGVLIYEM 218
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LXGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYEL 680
+ +D +A GV++YE+
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEM 231
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 496 NKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
++G+ FG V+ L G + AIK + +A +EF E + + H N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 545 VRLIGYCVEGS-LFLVYEYIENGNLNQHLR--------GSGKDTLTWSARMQ------IA 589
V L+G + L +++ Y +G+L++ L GS D T + ++ +
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG 649
A G+EY+ H V +H+D+ N+L+ K++D GL + EV +A + +L+G
Sbjct: 152 AQIAAGMEYLSSHHV---VHKDLATRNVLVYDKLNVKISDLGLFR--EVYAADYY-KLLG 205
Query: 650 T----FGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+M PE YG+ S D++++GVVL+E+ S
Sbjct: 206 NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 133/294 (45%), Gaps = 38/294 (12%)
Query: 474 VDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQASKEFLA 531
VD E Y + F+ KIG+G FG VF + R +K AIK +D++ +++ +
Sbjct: 11 VDLGTENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE 70
Query: 532 ----ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM 586
E+ VL+ + + G Y + L+++ EY+ G+ L D + +
Sbjct: 71 DIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATIL 130
Query: 587 QIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHT 645
+ L +GL+Y+H IHRDIK AN+L+ ++ K+ADFG+A +LT+ +
Sbjct: 131 REIL---KGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRN 182
Query: 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFE 705
VGT +M PE + K D+++ G+ EL + +E + LF
Sbjct: 183 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-------ARGEPPHSELHPMKVLF- 234
Query: 706 EVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
++ + +P P L +Y + + AC + P RP+ + ++
Sbjct: 235 -LIPKNNP---------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 274
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 104/200 (52%), Gaps = 18/200 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLN 543
+DF +++G G G V + R G A K + ++ + + EL+VL +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE- 601
+V G + +G + + E+++ G+L+Q L+ + + ++ IA+ RGL Y+ E
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAV--LRGLAYLREK 133
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +HRD+KP+NIL++ K+ DFG++ +L + S+ VGT YM PE Q
Sbjct: 134 HQI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLID----SMANSFVGTRSYMAPERLQ 186
Query: 661 YGEVSPKIDVYAFGVVLYEL 680
S + D+++ G+ L EL
Sbjct: 187 GTHYSVQSDIWSMGLSLVEL 206
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK------EFLAELKVLTH 538
+ + MG ++G G F V +G E AA IKK + +S+ E E+ +L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 539 VHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
+ H N++ L + + + L+ E + G L L + K++LT Q G+
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVH 122
Query: 598 YIHEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
Y+H + H D+KP NI L+DKN R K+ DFG+A E G+ + GT +
Sbjct: 123 YLHSKRIA---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEF 177
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
+ PE Y + + D+++ GV+ Y L+S
Sbjct: 178 VAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 498 IGQGGFGAVFYAE--LRGEKAAIKKMDMQASKE------FLAELKVLTHVHHLNLVRLIG 549
+G+G FG V + + G++ A+K + + K+ L E+++L + H N+++L
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 93
Query: 550 YCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ + G +LV E G L + + + +AR I G+ Y+H++ + +
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKI---V 148
Query: 609 HRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
HRD+KP N+L++ K+ ++ DFGL+ T ++ +GT Y+ PE +G
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPEVL-HGTYD 205
Query: 666 PKIDVYAFGVVLYELISA 683
K DV++ GV+LY L+S
Sbjct: 206 EKCDVWSTGVILYILLSG 223
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK------EFLAELKVLTH 538
+ + MG ++G G F V +G E AA IKK + +S+ E E+ +L
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 539 VHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
+ H N++ L + + + L+ E + G L L + K++LT Q G+
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVH 129
Query: 598 YIHEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
Y+H + H D+KP NI L+DKN R K+ DFG+A E G+ + GT +
Sbjct: 130 YLHSKRIA---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEF 184
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
+ PE Y + + D+++ GV+ Y L+S
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 498 IGQGGFGAVFYAE--LRGEKAAIKKMDMQASKE------FLAELKVLTHVHHLNLVRLIG 549
+G+G FG V + + G++ A+K + + K+ L E+++L + H N+++L
Sbjct: 40 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 99
Query: 550 YCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ + G +LV E G L + + + +AR I G+ Y+H++ + +
Sbjct: 100 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKI---V 154
Query: 609 HRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
HRD+KP N+L++ K+ ++ DFGL+ T ++ +GT Y+ PE +G
Sbjct: 155 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPE-VLHGTYD 211
Query: 666 PKIDVYAFGVVLYELISA 683
K DV++ GV+LY L+S
Sbjct: 212 EKCDVWSTGVILYILLSG 229
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 176
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 177 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 229
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 44/305 (14%)
Query: 463 LVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYA-ELRGEKA-AIKK 520
+ +P +G+ ++++ EEL F+ KIG+G FG VF + R +K AIK
Sbjct: 1 MAHSPVQSGLPGMQNLKADPEEL------FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKI 54
Query: 521 MDMQASKEFLA----ELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGS 575
+D++ +++ + E+ VL+ + + G Y + L+++ EY+ G+ L
Sbjct: 55 IDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG 114
Query: 576 GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA-K 634
D + ++ L +GL+Y+H IHRDIK AN+L+ ++ K+ADFG+A +
Sbjct: 115 PLDETQIATILREIL---KGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQ 168
Query: 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
LT+ + VGT +M PE + K D+++ G+ EL +
Sbjct: 169 LTD--TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL-------ARGEPPH 219
Query: 695 TESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS 754
+E + LF ++ + +P P L +Y + + AC + P RP+
Sbjct: 220 SELHPMKVLF--LIPKNNP---------PTLEGNY----SKPLKEFVEACLNKEPSFRPT 264
Query: 755 MRAIV 759
+ ++
Sbjct: 265 AKELL 269
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 101/216 (46%), Gaps = 18/216 (8%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKE----FLAELKVLTHV 539
++F +G+G FG V A ++ G+ A+K K D+ + + E ++L+
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 540 HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI-ALDSARGL 596
+ + + C + LF V E++ G+L H++ S + AR + A + L
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD---EARARFYAAEIISAL 137
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
++H+ + I+RD+K N+L+D K+ADFG+ K + T GT Y+ P
Sbjct: 138 MFLHDKGI---IYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDYIAP 193
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692
E Q P +D +A GV+LYE++ NE
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE 229
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 34/224 (15%)
Query: 480 FSYEELAKATND----FSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKE 528
F +ELAK + + + +G G +G+V A G + A+KK+ + +K
Sbjct: 4 FYRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKR 63
Query: 529 FLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSAR 585
EL++L H+ H N++ L+ +F +E N L HL G+ + + A+
Sbjct: 64 TYRELRLLKHMKHENVIGLL------DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK 117
Query: 586 MQ------IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639
+ + RGL+YIH + IHRD+KP+N+ ++++ K+ DFGLA+ T+
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD-- 172
Query: 640 SASVHTRLVGTFGYMPPEYA-QYGEVSPKIDVYAFGVVLYELIS 682
T V T Y PE + + +D+++ G ++ EL++
Sbjct: 173 --DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRG-----------EKAAIKKMDMQASKEFLAELKVLTHV 539
DF+ +G+G FG V +E +G + I+ D++ + + E +VL
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT---MVEKRVLALP 398
Query: 540 HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
+ + C + L+ V EY+ G+L H++ G+ + A + A GL
Sbjct: 399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLF 456
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
++ + I+RD+K N+++D K+ADFG+ K + GT Y+ PE
Sbjct: 457 FLQSKGI---IYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPE 512
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
Y +D +AFGV+LYE+++
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAG 538
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 486 AKAT-NDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKEFLA----ELKVL 536
AK T NDF +G+G FG V + G A+K + ++ +K+ +A E +VL
Sbjct: 3 AKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVL 62
Query: 537 THVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
+ H L L + L V EY G L HL S + T +
Sbjct: 63 QNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSA 120
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
LEY+H V ++RDIK N+++DK+ K+ DFGL K A++ T GT Y+
Sbjct: 121 LEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLA 176
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + + +D + GVV+YE++
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMM 202
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 141
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + + L GT Y+ PE
Sbjct: 142 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT----LCGTPEYLAPE 194
Query: 658 YAQYGEVSPKIDVYAFGVVLYEL 680
+ +D +A GV++YE+
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEM 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A G+ Y+
Sbjct: 72 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAEGMNYL 130
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 131 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE----GGKVPIKWM 183
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK------EFLAELKVLTH 538
+ + MG ++G G F V +G E AA IKK + +S+ E E+ +L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 539 VHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
+ H N++ L + + + L+ E + G L L + K++LT Q G+
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFLKQILDGVH 143
Query: 598 YIHEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
Y+H + H D+KP NI L+DKN R K+ DFG+A E G+ + GT +
Sbjct: 144 YLHSKRIA---HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE--FKNIFGTPEF 198
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
+ PE Y + + D+++ GV+ Y L+S
Sbjct: 199 VAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 24/203 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 148
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 149 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 201
Query: 658 YAQYGEVSPKIDVYAFGVVLYEL 680
+ +D +A GV++YE+
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEM 224
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 117/226 (51%), Gaps = 33/226 (14%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGE-----KAAIK--KMDMQAS---KEFLAE 532
E++ F++G +G+G FG+V A+L+ E K A+K K D+ AS +EFL E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 533 LKVLTHVHHLNLVRLIGYCV----EGSL---FLVYEYIENGNLNQHLRGS--GKD--TLT 581
+ H ++ +L+G + +G L ++ ++++G+L+ L S G++ L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 582 WSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641
++ +D A G+EY+ +IHRD+ N ++ ++ VADFGL++ ++ S
Sbjct: 136 LQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSR--KIYSG 190
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKI-----DVYAFGVVLYELIS 682
+ + G +P ++ ++ + DV+AFGV ++E+++
Sbjct: 191 DYYRQ--GCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 17/195 (8%)
Query: 497 KIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFL-AELKVLTHVHHLNLVRLI-GY 550
KIG+G G V A + G + A+K MD+ Q +E L E+ ++ H N+V + Y
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHR 610
V L+++ E+++ G L + + + + L + L Y+H V IHR
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL---QALAYLHAQGV---IHR 165
Query: 611 DIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVGTFGYMPPEYAQYGEVSPKI 668
DIK +IL+ + R K++DFG S V R LVGT +M PE + ++
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQI---SKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 669 DVYAFGVVLYELISA 683
D+++ G+++ E++
Sbjct: 223 DIWSLGIMVIEMVDG 237
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 150
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 151 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 203
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 204 IILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF----LAELKVLTHVHHL 542
++DF + + +G+G +G V A + GE AIKK++ F L E+K+L H H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 543 NLVRLIGYCVEGSLFLVYE-YIENGNLNQHLRGSGKDTLTWSARMQIAL-DSARGLEYIH 600
N++ + S E YI + L + +Q + + R ++ +H
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE---------VGSASVHTRLVGTF 651
V IHRD+KP+N+LI+ N KV DFGLA++ + G S V T
Sbjct: 130 GSNV---IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 652 GYMPPEYA-QYGEVSPKIDVYAFGVVLYEL 680
Y PE + S +DV++ G +L EL
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 22/206 (10%)
Query: 491 DFSMGNKIGQGGFGAVFYAELRG-----------EKAAIKKMDMQASKEFLAELKVLTHV 539
DF+ +G+G FG V +E +G + I+ D++ + + E +VL
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT---MVEKRVLALP 77
Query: 540 HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
+ + C + L+ V EY+ G+L H++ G+ + A + A GL
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLF 135
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
++ + I+RD+K N+++D K+ADFG+ K + GT Y+ PE
Sbjct: 136 FLQSKGI---IYRDLKLDNVMLDSEGHIKIADFGMCK-ENIWDGVTTKXFCGTPDYIAPE 191
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
Y +D +AFGV+LYE+++
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAG 217
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQASKEFL--------AELKVLT 537
AT+ + +IG G +G V+ A G A+K + + +E L A L+ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 538 HVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
H N+VRL+ C E + LV+E+++ +L +L + L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
RGL+++H + + +HRD+KP NIL+ K+ADFGLA++ A +V T
Sbjct: 121 FLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--APVVVTL 175
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYEL 680
Y PE + +D+++ G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 112/231 (48%), Gaps = 22/231 (9%)
Query: 465 AAPGVTGITVDKSVEFSYEELAKATNDF-SMGNKIGQGGFGAVFYAELRGEKA--AIKKM 521
AAPG + D ++ S + A +DF + +++G+G V+ + +G + A+K +
Sbjct: 30 AAPGTASLVPDYWIDGSNRD---ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVL 86
Query: 522 DMQASKEFL-AELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHL--RGSGK 577
K+ + E+ VL + H N+++L + + LV E + G L + +G
Sbjct: 87 KKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYS 146
Query: 578 DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAK 634
+ A QI + Y+HE+ + +HRD+KP N+L + K+ADFGL+K
Sbjct: 147 ERDAADAVKQIL----EAVAYLHENGI---VHRDLKPENLLYATPAPDAPLKIADFGLSK 199
Query: 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAME 685
+ E + + GT GY PE + P++D+++ G++ Y L+ E
Sbjct: 200 IVE--HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 498 IGQGGFGAVFYAE--LRGEKAAIKKMDMQASKE------FLAELKVLTHVHHLNLVRLIG 549
+G+G FG V + + G++ A+K + + K+ L E+++L + H N+++L
Sbjct: 57 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 116
Query: 550 YCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ + G +LV E G L + + + +AR I G+ Y+H++ + +
Sbjct: 117 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKI---V 171
Query: 609 HRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
HRD+KP N+L++ K+ ++ DFGL+ T ++ +GT Y+ PE +G
Sbjct: 172 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPEVL-HGTYD 228
Query: 666 PKIDVYAFGVVLYELISA 683
K DV++ GV+LY L+S
Sbjct: 229 EKCDVWSTGVILYILLSG 246
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 176
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 177 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 229
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 38/276 (13%)
Query: 492 FSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQASKEFLA----ELKVLTHVHHLNLV 545
F+ KIG+G FG VF + R +K AIK +D++ +++ + E+ VL+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 546 RLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
+ G Y + L+++ EY+ G+ L D + ++ L +GL+Y+H
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEK- 124
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
IHRDIK AN+L+ ++ K+ADFG+A +LT+ + VGT +M PE +
Sbjct: 125 --KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSA 180
Query: 664 VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723
K D+++ G+ EL + +E + LF ++ + +P P
Sbjct: 181 YDSKADIWSLGITAIEL-------ARGEPPHSELHPMKVLF--LIPKNNP---------P 222
Query: 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
L +Y + + AC + P RP+ + ++
Sbjct: 223 TLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 16/211 (7%)
Query: 482 YEELAKATNDFSMGNKIGQ-GGFGAVFYAELRGEK--AAIKKMDMQASKE---FLAELKV 535
YE + + N IG+ G FG V+ A+ + AA K +D ++ +E ++ E+ +
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 536 LTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
L H N+V+L+ + E +L+++ E+ G ++ + + LT S + +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLD 119
Query: 595 GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
L Y+H++ + IHRD+K NIL + K+ADFG++ +GT +M
Sbjct: 120 ALNYLHDNKI---IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWM 176
Query: 655 PPE--YAQYGEVSP---KIDVYAFGVVLYEL 680
PE + + P K DV++ G+ L E+
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQASKEFL--------AELKVLT 537
AT+ + +IG G +G V+ A G A+K + + +E L A L+ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 538 HVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
H N+VRL+ C E + LV+E+++ +L +L + L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
RGL+++H + + +HRD+KP NIL+ K+ADFGLA++ A +V T
Sbjct: 121 FLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--DPVVVTL 175
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYEL 680
Y PE + +D+++ G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYEL 680
+ +D +A GV++YE+
Sbjct: 209 IIISKGYNKAVDWWALGVLIYEM 231
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%), Gaps = 22/209 (10%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQASKEFL--------AELKVLT 537
AT+ + +IG G +G V+ A G A+K + + +E L A L+ L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 538 HVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
H N+VRL+ C E + LV+E+++ +L +L + L +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
RGL+++H + + +HRD+KP NIL+ K+ADFGLA++ A +V T
Sbjct: 121 FLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP--VVVTL 175
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYEL 680
Y PE + +D+++ G + E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 45/227 (19%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTH 538
N+ G +G G FG V A G K A+K + A + ++ELK+++H
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 539 V-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLR------------------GSGKD 578
+ H N+V L+G C G + ++ EY G+L LR S +D
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 579 TLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638
L +S+++ A+G+ ++ IHRD+ N+L+ AK+ DFGLA+
Sbjct: 166 LLHFSSQV------AQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 639 GSASV---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
S + + RL +M PE + + DV+++G++L+E+ S
Sbjct: 217 DSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 128/276 (46%), Gaps = 38/276 (13%)
Query: 492 FSMGNKIGQGGFGAVFYA-ELRGEKA-AIKKMDMQASKEFLA----ELKVLTHVHHLNLV 545
F+ KIG+G FG VF + R +K AIK +D++ +++ + E+ VL+ +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 546 RLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
+ G Y + L+++ EY+ G+ L D + ++ L +GL+Y+H
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEK- 124
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
IHRDIK AN+L+ ++ K+ADFG+A +LT+ + VGT +M PE +
Sbjct: 125 --KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSA 180
Query: 664 VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723
K D+++ G+ EL + +E + LF ++ + +P P
Sbjct: 181 YDSKADIWSLGITAIEL-------ARGEPPHSELHPMKVLF--LIPKNNP---------P 222
Query: 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759
L +Y + + AC + P RP+ + ++
Sbjct: 223 TLEGNYS----KPLKEFVEACLNKEPSFRPTAKELL 254
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 102/198 (51%), Gaps = 20/198 (10%)
Query: 498 IGQGGFGAVFYAE--LRGEKAAIKKMDMQASKE------FLAELKVLTHVHHLNLVRLIG 549
+G+G FG V + + G++ A+K + + K+ L E+++L + H N+++L
Sbjct: 58 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYE 117
Query: 550 YCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ + G +LV E G L + + + +AR I G+ Y+H++ + +
Sbjct: 118 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYMHKNKI---V 172
Query: 609 HRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
HRD+KP N+L++ K+ ++ DFGL+ T ++ +GT Y+ PE +G
Sbjct: 173 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKMKDKIGTAYYIAPEVL-HGTYD 229
Query: 666 PKIDVYAFGVVLYELISA 683
K DV++ GV+LY L+S
Sbjct: 230 EKCDVWSTGVILYILLSG 247
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKEFLA----ELKVLTHVHH 541
NDF +G+G FG V + G A+K + ++ +K+ +A E +VL + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
L L + L V EY G L HL S + T + LEY+H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLH 122
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
V ++RDIK N+++DK+ K+ DFGL K A++ T GT Y+ PE +
Sbjct: 123 SRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLE 178
Query: 661 YGEVSPKIDVYAFGVVLYELI 681
+ +D + GVV+YE++
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMM 199
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++Y++ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 24/230 (10%)
Query: 468 GVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM 521
G GI ++ + + K T +F + G FG V+ GEK AIK++
Sbjct: 1 GAMGIRSGEAPNQALLRILKET-EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL 59
Query: 522 ----DMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGK 577
+A+KE L E V+ V + ++ RL+G C+ ++ L+ + + G L ++R K
Sbjct: 60 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHK 118
Query: 578 DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637
D + + + A+G+ Y+ + + +HRD+ N+L+ K+ DFGLAKL
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKI-----DVYAFGVVLYELIS 682
H G +P ++ + +I DV+++GV ++EL++
Sbjct: 176 AEEKEYHAE----GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASK----EFLAELKVLTHVHHLNLV 545
F +G G F V AE + G+ A+K + +A K E+ VL + H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 546 RLIG-YCVEGSLFLVYEYIENGNLNQHLRGSG----KDTLTWSARMQIALDSARGLEYIH 600
L Y L+LV + + G L + G KD S ++ LD+ + Y+H
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDA---STLIRQVLDA---VYYLH 137
Query: 601 EHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
+ +HRD+KP N+L D+ + ++DFGL+K+ G V + GT GY+ PE
Sbjct: 138 RMGI---VHRDLKPENLLYYSQDEESKIMISDFGLSKME--GKGDVMSTACGTPGYVAPE 192
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709
S +D ++ GV+ Y L+ N++ LFE++L+
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDS--------KLFEQILK 236
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY G + HLR G+ + AR QI L E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ KV DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS---KEF---LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q KE L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ KV DFGLAK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 33/205 (16%)
Query: 498 IGQGGFGAVFYAEL--RGEKAAI--------KKMDMQASKEFLAELKVLTHVHHLNLVRL 547
+G G FG V+ GE I + +A+KE L E V+ V + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 548 IGYCVEGSLFLVYEYIENGNLNQHLRGS-----GKDTLTWSARMQIALDSARGLEYIHEH 602
+G C+ ++ LV + + G L H+R + +D L W MQIA +G+ Y+ +
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWC--MQIA----KGMSYLEDV 138
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG 662
+ +HRD+ N+L+ K+ DFGLA+L ++ H G +P ++
Sbjct: 139 RL---VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH----ADGGKVPIKWMALE 191
Query: 663 EV-----SPKIDVYAFGVVLYELIS 682
+ + + DV+++GV ++EL++
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 15/201 (7%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKEFLA----ELKVLTHVHH 541
NDF +G+G FG V + G A+K + ++ +K+ +A E +VL + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
L L + L V EY G L HL S + T + LEY+H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLH 122
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
V ++RDIK N+++DK+ K+ DFGL K A++ T GT Y+ PE +
Sbjct: 123 SRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLE 178
Query: 661 YGEVSPKIDVYAFGVVLYELI 681
+ +D + GVV+YE++
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMM 199
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 494 MGNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
+G IG+G FG V E AIK S ++FL E + H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 545 VRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
V+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 74 VKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
++HRDI N+L+ N K+ DFGL++ E + ++ +M PE +
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 665 SPKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
+ DV+ FGV ++E++ M V VK N+ I
Sbjct: 190 TSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 222
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 24/230 (10%)
Query: 468 GVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM 521
G GI ++ + + K T +F + G FG V+ GEK AIK++
Sbjct: 1 GAMGIRSGEAPNQALLRILKET-EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKEL 59
Query: 522 ----DMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGK 577
+A+KE L E V+ V + ++ RL+G C+ ++ L+ + + G L ++R K
Sbjct: 60 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHK 118
Query: 578 DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637
D + + + A+G+ Y+ + + +HRD+ N+L+ K+ DFGLAKL
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLG 175
Query: 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKI-----DVYAFGVVLYELIS 682
H G +P ++ + +I DV+++GV ++EL++
Sbjct: 176 AEEKEYHAE----GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-------ELRGEKAAIKKMDMQASKEFLAELKVLTHVHH 541
T+D+ + ++G+G F V E + KK+ + ++ E ++ + H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 542 LNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
N+VRL EG +LV++ + G L + + ++ + + + +IH
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIHQILESVNHIH 147
Query: 601 EHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
+H + +HRD+KP N+L+ K K+ADFGLA + G GT GY+ PE
Sbjct: 148 QHDI---VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLSPE 203
Query: 658 YAQYGEVSPKIDVYAFGVVLYELI 681
+ +D++A GV+LY L+
Sbjct: 204 VLRKDPYGKPVDIWACGVILYILL 227
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTH 538
N+ G +G G FG V A G K A+K + A + ++ELK+++H
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 539 V-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSG--------------KDTLTW 582
+ H N+V L+G C G + ++ EY G+L LR +D L +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642
S+++ A+G+ ++ IHRD+ N+L+ AK+ DFGLA+ S
Sbjct: 158 SSQV------AQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 208
Query: 643 V---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ + RL +M PE + + DV+++G++L+E+ S
Sbjct: 209 IVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 137
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFG AKL H G +P ++
Sbjct: 138 EDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH----AEGGKVPIKWM 190
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 498 IGQGGFG-AVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVH-HLNLVRLIGYCVEGS 555
+G G G VF +G A+K+M + L E+K+LT H N++R YC E +
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETT 98
Query: 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI-----HEHTVPVYIHR 610
+Y +E NLN K+ + ++Q + L I H H++ + IHR
Sbjct: 99 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI-IHR 157
Query: 611 DIKPANILID-------------KNFRAKVADFGLAKLTEVGSASVHTRL---VGTFGYM 654
D+KP NIL+ +N R ++DFGL K + G L GT G+
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 217
Query: 655 PPEYAQYG---EVSPKIDVYAFGVVLYELIS 682
PE + ++ ID+++ G V Y ++S
Sbjct: 218 APELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 114/274 (41%), Gaps = 41/274 (14%)
Query: 450 PAIALVKNSESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSM--------------- 494
P+I + N+E GV TV S Y E+ + ++M
Sbjct: 341 PSIPKLANNEKQ------GVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIEL 394
Query: 495 GNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNLV 545
G IG+G FG V E AIK S ++FL E + H ++V
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 546 RLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 455 KLIGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
++HRDI N+L+ N K+ DFGL++ E + ++ +M PE + +
Sbjct: 512 -FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 666 PKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
DV+ FGV ++E++ M V VK N+ I
Sbjct: 571 SASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 602
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFG AKL H G +P ++
Sbjct: 136 EDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE----GGKVPIKWM 188
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASK----EFLAELKVLTHVHHLNLV 545
F K+G G FG V E R G + IK ++ S+ + AE++VL + H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 546 RLIGYCVE-GSLFLVYEYIENGNLNQHL---RGSGKDTLTWSARMQIALDSARGLEYIHE 601
++ + ++++V E E G L + + + GK L+ ++ L Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAELMKQMMNALAYFHS 142
Query: 602 HTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY 658
V +H+D+KP NIL + K+ DFGLA+L + S T GT YM PE
Sbjct: 143 QHV---VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPEV 197
Query: 659 AQYGEVSPKIDVYAFGVVLYELISA 683
+ +V+ K D+++ GVV+Y L++
Sbjct: 198 FKR-DVTFKCDIWSAGVVMYFLLTG 221
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 494 MGNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
+G IG+G FG V E AIK S ++FL E + H ++
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 101
Query: 545 VRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
V+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 102 VKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR- 159
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
++HRDI N+L+ N K+ DFGL++ E + ++ +M PE +
Sbjct: 160 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 665 SPKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
+ DV+ FGV ++E++ M V VK N+ I
Sbjct: 218 TSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 250
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 24/230 (10%)
Query: 468 GVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM 521
G GI ++ + + K T +F +G G FG V+ GEK AIK++
Sbjct: 1 GAMGIRSGEAPNQALLRILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKEL 59
Query: 522 ----DMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGK 577
+A+KE L E V+ V + ++ RL+G C+ ++ L+ + + G L ++R K
Sbjct: 60 REATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHK 118
Query: 578 DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637
D + + + A+G+ Y+ + + +HRD+ N+L+ K+ DFG AKL
Sbjct: 119 DNIGSQYLLNWCVQIAKGMNYLEDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLG 175
Query: 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKI-----DVYAFGVVLYELIS 682
H G +P ++ + +I DV+++GV ++EL++
Sbjct: 176 AEEKEYHAE----GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 492 FSMGNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
+G IG+G FG V E AIK S ++FL E + H
Sbjct: 15 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 543 NLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
++V+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 75 HIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK 133
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG 662
++HRDI N+L+ N K+ DFGL++ E + ++ +M PE +
Sbjct: 134 R---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 190
Query: 663 EVSPKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
+ DV+ FGV ++E++ M V VK N+ I
Sbjct: 191 RFTSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 225
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++ V+
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY G + HLR G+ + AR QI L E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ KVADFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFG AKL H G +P ++
Sbjct: 136 EDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE----GGKVPIKWM 188
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 494 MGNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
+G IG+G FG V E AIK S ++FL E + H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 545 VRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
V+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 74 VKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR- 131
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
++HRDI N+L+ N K+ DFGL++ E + ++ +M PE +
Sbjct: 132 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 665 SPKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
+ DV+ FGV ++E++ M V VK N+ I
Sbjct: 190 TSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 222
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 20/215 (9%)
Query: 494 MGNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
+G IG+G FG V E AIK S ++FL E + H ++
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 545 VRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
V+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 79 VKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR- 136
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
++HRDI N+L+ N K+ DFGL++ E + ++ +M PE +
Sbjct: 137 --FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 665 SPKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
+ DV+ FGV ++E++ M V VK N+ I
Sbjct: 195 TSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 227
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 498 IGQGGFG-AVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVH-HLNLVRLIGYCVEGS 555
+G G G VF +G A+K+M + L E+K+LT H N++R YC E +
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETT 98
Query: 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI-----HEHTVPVYIHR 610
+Y +E NLN K+ + ++Q + L I H H++ + IHR
Sbjct: 99 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI-IHR 157
Query: 611 DIKPANILID-------------KNFRAKVADFGLAKLTEVGSASVHTRL---VGTFGYM 654
D+KP NIL+ +N R ++DFGL K + G L GT G+
Sbjct: 158 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 217
Query: 655 PPEYAQYG---EVSPKIDVYAFGVVLYELIS 682
PE + ++ ID+++ G V Y ++S
Sbjct: 218 APELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 19/206 (9%)
Query: 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIGY 550
+G+G FG V + R ++ A+K ++ ++K L E+++L + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 551 CVEGSLF-LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIH 609
+ S F +V E G L + + + +AR+ + S G+ Y+H+H + +H
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMHKHNI---VH 144
Query: 610 RDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSP 666
RD+KP NIL+ +K+ K+ DFGL+ T + +GT Y+ PE + G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS--TCFQQNTKMKDRIGTAYYIAPEVLR-GTYDE 201
Query: 667 KIDVYAFGVVLYELISAMEAVVKTNE 692
K DV++ GV+LY L+S NE
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNE 227
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 492 FSMGNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
+G IG+G FG V E AIK S ++FL E + H
Sbjct: 9 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 543 NLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
++V+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 69 HIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK 127
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG 662
++HRDI N+L+ N K+ DFGL++ E + ++ +M PE +
Sbjct: 128 R---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 663 EVSPKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
+ DV+ FGV ++E++ M V VK N+ I
Sbjct: 185 RFTSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 219
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 96/217 (44%), Gaps = 20/217 (9%)
Query: 492 FSMGNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
+G IG+G FG V E AIK S ++FL E + H
Sbjct: 14 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 543 NLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
++V+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 74 HIVKLIGVITENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK 132
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG 662
++HRDI N+L+ N K+ DFGL++ E + ++ +M PE +
Sbjct: 133 R---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 189
Query: 663 EVSPKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
+ DV+ FGV ++E++ M V VK N+ I
Sbjct: 190 RFTSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIGY 550
+G+G FG V + R ++ A+K ++ ++K L E+++L + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 551 CVEGSLF-LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIH 609
+ S F +V E G L + + + +AR+ + S G+ Y+H+H + +H
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMHKHNI---VH 144
Query: 610 RDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSP 666
RD+KP NIL+ +K+ K+ DFGL+ + + + R +GT Y+ PE + G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR-IGTAYYIAPEVLR-GTYDE 201
Query: 667 KIDVYAFGVVLYELISAMEAVVKTNE 692
K DV++ GV+LY L+S NE
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNE 227
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V Y G K A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHEHTV 604
+ E + L HL G+ + + ++ + RGL+YIH +
Sbjct: 119 FTPATSL---EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 175
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-QYGE 663
IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE +
Sbjct: 176 ---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMH 228
Query: 664 VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709
+ +D+++ G ++ EL+ T T+ T + ++++R
Sbjct: 229 YNMTVDIWSVGCIMAELL--------TGRTLFPGTDHINQLQQIMR 266
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 19/206 (9%)
Query: 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVRLIGY 550
+G+G FG V + R ++ A+K ++ ++K L E+++L + H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 551 CVEGSLF-LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIH 609
+ S F +V E G L + + + +AR+ + S G+ Y+H+H + +H
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFS--GITYMHKHNI---VH 144
Query: 610 RDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSP 666
RD+KP NIL+ +K+ K+ DFGL+ + + + R +GT Y+ PE + G
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQ-QNTKMKDR-IGTAYYIAPEVLR-GTYDE 201
Query: 667 KIDVYAFGVVLYELISAMEAVVKTNE 692
K DV++ GV+LY L+S NE
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNE 227
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 41/223 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTH 538
N+ G +G G FG V A G K A+K + A + ++ELK+++H
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 539 V-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSG--------------KDTLTW 582
+ H N+V L+G C G + ++ EY G+L LR +D L +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642
S+++ A+G+ ++ IHRD+ N+L+ AK+ DFGLA+ S
Sbjct: 166 SSQV------AQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 216
Query: 643 V---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ + RL +M PE + + DV+++G++L+E+ S
Sbjct: 217 IVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F + G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFGLAKL H G +P ++
Sbjct: 134 EDRRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH----AEGGKVPIKWM 186
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 77 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 135
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFG AKL H G +P ++
Sbjct: 136 EDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAE----GGKVPIKWM 188
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 545 VRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG 125
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYG 662
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 126 I---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 182
Query: 663 EVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 183 EFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 101/202 (50%), Gaps = 14/202 (6%)
Query: 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 545 VRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHGIG 124
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYG 662
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 125 I---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRR 181
Query: 663 EVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 182 EFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 14/207 (6%)
Query: 486 AKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHV 539
A D+ + +G+G +G V A R E A+K +DM+ + + E+ + +
Sbjct: 1 APFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML 60
Query: 540 HHLNLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+H N+V+ G+ EG++ +L EY G L + + R L + G+ Y
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVY 118
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPE 657
+H + HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE
Sbjct: 119 LHGIGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 658 YAQYGEVSPK-IDVYAFGVVLYELISA 683
+ E + +DV++ G+VL +++
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKA----AIKKM----DMQASKEFLAELKVLTHV 539
+F +G G FG V+ GEK AIK++ +A+KE L E V+ V
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ ++ RL+G C+ ++ L+ + + G L ++R KD + + + A+G+ Y+
Sbjct: 75 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVR-EHKDNIGSQYLLNWCVQIAKGMNYL 133
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
+ + +HRD+ N+L+ K+ DFG AKL H G +P ++
Sbjct: 134 EDRRL---VHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH----AEGGKVPIKWM 186
Query: 660 QYGEVSPKI-----DVYAFGVVLYELIS 682
+ +I DV+++GV ++EL++
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKEFLA----ELKVLTHVHH 541
NDF +G+G FG V + G A+K + ++ +K+ +A E +VL + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
L L + L V EY G L HL S + T + LEY+H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLH 122
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
V ++RDIK N+++DK+ K+ DFGL K + + GT Y+ PE +
Sbjct: 123 SRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLE 178
Query: 661 YGEVSPKIDVYAFGVVLYELI 681
+ +D + GVV+YE++
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMM 199
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 481 SYEELAKATN--DF-SMGNKIGQGGFGAVFYAELRGEK--AAIKKMDMQASKE---FLAE 532
YE + + N DF + ++G G FG V+ A+ + AA K +D ++ +E ++ E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 533 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
+ +L H N+V+L+ + E +L+++ E+ G ++ + + LT S +
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQ 143
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVG 649
+ L Y+H++ + IHRD+K NIL + K+ADFG++ + ++ R +G
Sbjct: 144 TLDALNYLHDNKI---IHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTIQRRDSFIG 197
Query: 650 TFGYMPPE--YAQYGEVSP---KIDVYAFGVVLYEL 680
T +M PE + + P K DV++ G+ L E+
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYA-------ELRGEKAAIKKMDMQASKEFLAELKVLTHV 539
K ++++ + ++G+G F V E + KK+ + ++ E ++ +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 540 HHLNLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRG----SGKDTLTWSARMQIALDSAR 594
H N+VRL E S +LV++ + G L + + S D S +Q L+S
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA---SHCIQQILES-- 117
Query: 595 GLEYIHEHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
+ Y H + + +HR++KP N+L+ K K+ADFGLA EV + GT
Sbjct: 118 -IAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 171
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681
GY+ PE + S +D++A GV+LY L+
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILL 201
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 20/198 (10%)
Query: 498 IGQGGFGAVFYAE--LRGEKAAIKKMDMQASKE------FLAELKVLTHVHHLNLVRLIG 549
+G+G FG V + + G++ A+K + + K+ L E+++L + H N+ +L
Sbjct: 34 LGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYE 93
Query: 550 YCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ + G +LV E G L + + + +AR I G+ Y H++ + +
Sbjct: 94 FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR--IIRQVLSGITYXHKNKI---V 148
Query: 609 HRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
HRD+KP N+L++ K+ ++ DFGL+ T ++ +GT Y+ PE +G
Sbjct: 149 HRDLKPENLLLESKSKDANIRIIDFGLS--THFEASKKXKDKIGTAYYIAPEVL-HGTYD 205
Query: 666 PKIDVYAFGVVLYELISA 683
K DV++ GV+LY L+S
Sbjct: 206 EKCDVWSTGVILYILLSG 223
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYA-------ELRGEKAAIKKMDMQASKEFLAELKVLTHV 539
K ++++ + ++G+G F V E + KK+ + ++ E ++ +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 540 HHLNLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRG----SGKDTLTWSARMQIALDSAR 594
H N+VRL E S +LV++ + G L + + S D S +Q L+S
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA---SHCIQQILES-- 116
Query: 595 GLEYIHEHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
+ Y H + + +HR++KP N+L+ K K+ADFGLA EV + GT
Sbjct: 117 -IAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 170
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681
GY+ PE + S +D++A GV+LY L+
Sbjct: 171 GYLSPEVLKKDPYSKPVDIWACGVILYILL 200
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 124 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 124 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 124 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYA-------ELRGEKAAIKKMDMQASKEFLAELKVLTHV 539
K ++++ + ++G+G F V E + KK+ + ++ E ++ +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 62
Query: 540 HHLNLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRG----SGKDTLTWSARMQIALDSAR 594
H N+VRL E S +LV++ + G L + + S D S +Q L+S
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADA---SHCIQQILES-- 117
Query: 595 GLEYIHEHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
+ Y H + + +HR++KP N+L+ K K+ADFGLA EV + GT
Sbjct: 118 -IAYCHSNGI---VHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTP 171
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681
GY+ PE + S +D++A GV+LY L+
Sbjct: 172 GYLSPEVLKKDPYSKPVDIWACGVILYILL 201
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 124 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 124 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 124/266 (46%), Gaps = 45/266 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKA--AIKKMDMQASKE------FLAELKVLTHVHH 541
+ F + IG+G FG V + K A+K M+ Q E EL+++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGS---GKDTLT-WSARMQIALDSARGL 596
LV L + E +F+V + + G+L HL+ + ++T+ + + +ALD
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD----- 129
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
Y+ + IHRD+KP NIL+D++ + DF +A + + + T + GT YM P
Sbjct: 130 -YLQNQRI---IHRDMKPDNILLDEHGHVHITDFNIAAM--LPRETQITTMAGTKPYMAP 183
Query: 657 EY---AQYGEVSPKIDVYAFGVVLYELI-----------SAMEAVVKTNETIT------E 696
E + S +D ++ GV YEL+ ++ + +V T ET
Sbjct: 184 EMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAW 243
Query: 697 STGLVALFEEVLRQPDPREDLQRLVD 722
S +V+L +++L +P+P + +L D
Sbjct: 244 SQEMVSLLKKLL-EPNPDQRFSQLSD 268
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKEFLA----ELKVLTHVHH 541
NDF +G+G FG V + G A+K + ++ +K+ +A E +VL + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
L L + L V EY G L HL S + T + LEY+H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLH 122
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
V ++RDIK N+++DK+ K+ DFGL K + + GT Y+ PE +
Sbjct: 123 SRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLE 178
Query: 661 YGEVSPKIDVYAFGVVLYELI 681
+ +D + GVV+YE++
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMM 199
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKEFLA----ELKVLTHVHH 541
NDF +G+G FG V + G A+K + ++ +K+ +A E +VL + H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
L L + L V EY G L HL S + T + LEY+H
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLH 127
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
V ++RDIK N+++DK+ K+ DFGL K + + GT Y+ PE +
Sbjct: 128 SRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLE 183
Query: 661 YGEVSPKIDVYAFGVVLYELI 681
+ +D + GVV+YE++
Sbjct: 184 DNDYGRAVDWWGLGVVMYEMM 204
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 124 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 124 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 83
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 84 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ A V T Y PE
Sbjct: 140 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLN 192
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLT 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 91/201 (45%), Gaps = 15/201 (7%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKEFLA----ELKVLTHVHH 541
NDF +G+G FG V + G A+K + ++ +K+ +A E +VL + H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600
L L + L V EY G L HL S + T + LEY+H
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLH 122
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
V ++RDIK N+++DK+ K+ DFGL K + + GT Y+ PE +
Sbjct: 123 SRDV---VYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAPEVLE 178
Query: 661 YGEVSPKIDVYAFGVVLYELI 681
+ +D + GVV+YE++
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMM 199
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ A V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ A V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAG----FVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTH 538
N+ G +G G FG V A G K A+K + A + ++ELK+++H
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 539 V-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSAR----------- 585
+ H N+V L+G C G + ++ EY G+L LR L +S
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 586 ---MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642
+ + A+G+ ++ IHRD+ N+L+ AK+ DFGLA+ S
Sbjct: 166 RDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 643 V---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+ + RL +M PE + + DV+++G++L+E+ S
Sbjct: 223 IVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQ-----------ASKEFLAELK 534
AT+ + +IG G +G V+ A G A+K + + ++ +A L+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 535 VLTHVHHLNLVRLIGYCV------EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
L H N+VRL+ C E + LV+E+++ +L +L + L +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDL 125
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648
RGL+++H + + +HRD+KP NIL+ K+ADFGLA++ A T +V
Sbjct: 126 MRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL--TPVV 180
Query: 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYEL 680
T Y PE + +D+++ G + E+
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT Y+ P
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPA 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ KV DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 98/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS---KEF---LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q KE L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ +V DFGLAK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 498 IGQGGFG-AVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVH-HLNLVRLIGYCVEGS 555
+G G G VF +G A+K+M + L E+K+LT H N++R YC E +
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRY--YCSETT 80
Query: 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI-----HEHTVPVYIHR 610
+Y +E NLN K+ + ++Q + L I H H++ + IHR
Sbjct: 81 DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKI-IHR 139
Query: 611 DIKPANILID-------------KNFRAKVADFGLAKLTEVGSASVHTRL---VGTFGYM 654
D+KP NIL+ +N R ++DFGL K + G L GT G+
Sbjct: 140 DLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWR 199
Query: 655 PPEYAQYG-------EVSPKIDVYAFGVVLYELIS 682
PE + ++ ID+++ G V Y ++S
Sbjct: 200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G +G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 481 SYEELAKATN--DF-SMGNKIGQGGFGAVFYAELRGEK--AAIKKMDMQASKE---FLAE 532
YE + + N DF + ++G G FG V+ A+ + AA K +D ++ +E ++ E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 533 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
+ +L H N+V+L+ + E +L+++ E+ G ++ + + LT S +
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQ 143
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVG 649
+ L Y+H++ + IHRD+K NIL + K+ADFG++ + + R +G
Sbjct: 144 TLDALNYLHDNKI---IHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDSFIG 197
Query: 650 TFGYMPPE--YAQYGEVSP---KIDVYAFGVVLYEL 680
T +M PE + + P K DV++ G+ L E+
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 23/216 (10%)
Query: 481 SYEELAKATN--DF-SMGNKIGQGGFGAVFYAELRGEK--AAIKKMDMQASKE---FLAE 532
YE + + N DF + ++G G FG V+ A+ + AA K +D ++ +E ++ E
Sbjct: 25 QYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVE 84
Query: 533 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
+ +L H N+V+L+ + E +L+++ E+ G ++ + + LT S +
Sbjct: 85 IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQ 143
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR--LVG 649
+ L Y+H++ + IHRD+K NIL + K+ADFG++ + + R +G
Sbjct: 144 TLDALNYLHDNKI---IHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDXFIG 197
Query: 650 TFGYMPPE--YAQYGEVSP---KIDVYAFGVVLYEL 680
T +M PE + + P K DV++ G+ L E+
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 20/205 (9%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQA------SKEFLAELKVLTHVH 540
++ + K+G G +G V + L G + AIK + + S L E+ VL +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 541 HLNLVRLIGYCVEG-SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N+++L + + + +LV E G L + K + +A + + S G Y+
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS--GTTYL 137
Query: 600 HEHTVPVYIHRDIKPANILIDKNFR---AKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
H+H + +HRD+KP N+L++ R K+ DFGL+ EVG + RL GT Y+ P
Sbjct: 138 HKHNI---VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL-GTAYYIAP 192
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + + K DV++ GV+LY L+
Sbjct: 193 EVLR-KKYDEKCDVWSCGVILYILL 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 94
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 95 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T A T V T Y PE
Sbjct: 151 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLN 203
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLT 225
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 26/198 (13%)
Query: 498 IGQGGFGAVFYAE--LRGEKAAIK----------KMDMQASKEFLAELKVLTHVHHLNLV 545
+G+G FG V A +K A+K M M+ +E ++ LK+L H H + L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVERE-ISYLKLLRHPHIIKLY 75
Query: 546 RLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
+I + +V EY G L ++ + T R + A +EY H H +
Sbjct: 76 DVI--TTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHRHKI- 129
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV- 664
+HRD+KP N+L+D N K+ADFGL+ + G+ + G+ Y PE G++
Sbjct: 130 --VHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPEVIN-GKLY 184
Query: 665 -SPKIDVYAFGVVLYELI 681
P++DV++ G+VLY ++
Sbjct: 185 AGPEVDVWSCGIVLYVML 202
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 94
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 95 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T A T V T Y PE
Sbjct: 151 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLN 203
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 94
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 95 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T A T V T Y PE
Sbjct: 151 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHT----ADEMTGYVATRWYRAPEIMLN 203
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLT 225
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 83
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 84 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 140 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 192
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLT 214
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 97
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 98 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 154 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 206
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLT 228
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY+ G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N+LID+ +V DFG AK + + L GT + PE
Sbjct: 156 YLHSLDL---IYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEALAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 107
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 108 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 164 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 216
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTG 239
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
IG G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 92
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 93 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 149 ADI---IHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 201
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 106
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 107 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 163 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 215
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTG 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY G + HLR G+ AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ KV DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 496 NKIGQGGFGAVFYAE--LRGEKAAIKKMDMQA------SKEFLAELKVLTHVHHLNLVRL 547
K+G G +G V + L G + AIK + + S L E+ VL + H N+++L
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 548 IGYCVEG-SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+ + + +LV E G L + K + +A + + S G Y+H+H +
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS--GTTYLHKHNI-- 125
Query: 607 YIHRDIKPANILIDKNFR---AKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGE 663
+HRD+KP N+L++ R K+ DFGL+ EVG + RL GT Y+ PE + +
Sbjct: 126 -VHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL-GTAYYIAPEVLR-KK 181
Query: 664 VSPKIDVYAFGVVLYELI 681
K DV++ GV+LY L+
Sbjct: 182 YDEKCDVWSCGVILYILL 199
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 494 MGNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNL 544
+G IG+G FG V E AIK S ++FL E + H ++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 545 VRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTV 604
V+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 74 VKLIGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR- 131
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
++HRDI N+L+ K+ DFGL++ E + ++ +M PE +
Sbjct: 132 --FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 665 SPKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
+ DV+ FGV ++E++ M V VK N+ I
Sbjct: 190 TSASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 93
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 94 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 150 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 202
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLT 224
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGXVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
LV+L + +L++V EY G + HLR G+ + AR QI L E
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 155
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ +V DFG AK + + L GT Y+ PE
Sbjct: 156 YLHSLDL---IYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWX----LCGTPEYLAPE 208
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 92
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 93 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 149 ADI---IHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 201
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTG 224
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 14/204 (6%)
Query: 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHL 542
D+ + +G+G G V A R E A+K +DM+ + + E+ + ++H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 543 NLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
N+V+ G+ EG++ +L EY G L + + R L + G+ Y+H
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
+ HRDIKP N+L+D+ K++DFGLA + + + ++ GT Y+ PE +
Sbjct: 123 IGI---THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 661 YGEVSPK-IDVYAFGVVLYELISA 683
E + +DV++ G+VL +++
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 85
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 86 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 141
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 142 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 194
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTG 217
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 99
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 100 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 156 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 208
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTG 231
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 113/274 (41%), Gaps = 41/274 (14%)
Query: 450 PAIALVKNSESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSM--------------- 494
P+I + N+E GV TV S Y E+ + ++M
Sbjct: 341 PSIPKLANNEKQ------GVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIEL 394
Query: 495 GNKIGQGGFGAVFYA-----ELRGEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNLV 545
G IG+G FG V E AIK S ++FL E + H ++V
Sbjct: 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV 454
Query: 546 RLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
+LIG E ++++ E G L L+ K +L ++ + A + L Y+
Sbjct: 455 KLIGVITENPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR-- 511
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
++HRDI N+L+ K+ DFGL++ E + ++ +M PE + +
Sbjct: 512 -FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 666 PKIDVYAFGVVLYELISAMEAV-----VKTNETI 694
DV+ FGV ++E++ M V VK N+ I
Sbjct: 571 SASDVWMFGVCMWEIL--MHGVKPFQGVKNNDVI 602
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 99
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 100 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 156 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 208
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 99
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 100 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 156 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 208
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTG 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 89
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 90 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 146 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 198
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 89
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 90 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 146 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 198
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTG 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 92
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 93 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 149 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 201
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTG 224
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 84
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 85 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 141 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 193
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTG 216
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 86
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 87 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 142
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 143 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 195
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTG 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 92
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 93 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 149 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 201
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTG 224
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 107
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 108 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 164 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 216
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTG 239
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 25/252 (9%)
Query: 464 VAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAV--FYAELRGEKAAIKKM 521
+ + G I+ ++ +F+ E+L +IG+G +G+V + G+ A+K++
Sbjct: 3 IESSGKLKISPEQHWDFTAEDLKDL-------GEIGRGAYGSVNKMVHKPSGQIMAVKRI 55
Query: 522 ----DMQASKEFLAELKVLTHVHHLN-LVRLIGYCV-EGSLFLVYEYIENG--NLNQHLR 573
D + K+ L +L V+ +V+ G EG ++ E + +++
Sbjct: 56 RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVY 115
Query: 574 GSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633
D + +I L + + L ++ E+ IHRDIKP+NIL+D++ K+ DFG++
Sbjct: 116 SVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS 173
Query: 634 KLTEVGSASVHTRLVGTFGYMPPEY----AQYGEVSPKIDVYAFGVVLYELISAMEAVVK 689
++ + TR G YM PE A + DV++ G+ LYEL + K
Sbjct: 174 --GQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK 231
Query: 690 TNETITESTGLV 701
N + T +V
Sbjct: 232 WNSVFDQLTQVV 243
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 94
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 95 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 151 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 203
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLT 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 98
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 99 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 155 ADI---IHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 207
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTG 230
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 106
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 107 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 163 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 215
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTG 238
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 89
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 90 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 146 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 198
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTG 221
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 83
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 84 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 140 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 192
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTG 215
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + S ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGL + T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDSELKILDFGLCRHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 84
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 85 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 141 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 193
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTG 216
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 99/207 (47%), Gaps = 28/207 (13%)
Query: 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQA---SKEFLAELKVLTHVH---------HLN 543
IG+G V R G + A+K M++ A S E L E++ T H +
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 544 LVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
++ LI Y +FLV++ + G L +L + K L+ I + ++H +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFLHAN 219
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ-- 660
+ +HRD+KP NIL+D N + +++DFG + E G L GT GY+ PE +
Sbjct: 220 NI---VHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL--RELCGTPGYLAPEILKCS 274
Query: 661 YGEVSP----KIDVYAFGVVLYELISA 683
E P ++D++A GV+L+ L++
Sbjct: 275 MDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 98
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 99 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 155 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 207
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTG 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 24/200 (12%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 551 CVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHEHTV 604
E + L HL G+ + + ++ + RGL+YIH +
Sbjct: 90 FTPARSL---EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADI 146
Query: 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-QYGE 663
IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE +
Sbjct: 147 ---IHRDLKPSNLAVNEDXELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLNWMH 199
Query: 664 VSPKIDVYAFGVVLYELISA 683
+ +D+++ G ++ EL++
Sbjct: 200 YNQTVDIWSVGCIMAELLTG 219
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 93
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 94 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 150 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 202
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTG 225
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 9 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 55
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 56 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 114
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 115 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 170
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 171 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 225
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 2 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 48
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 49 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 107
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 108 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 163
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 164 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 89
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 90 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 146 ADI---IHRDLKPSNLAVNEDSELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 198
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTG 221
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 20 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 66
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 67 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 125
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 126 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 181
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 182 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 236
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 1 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 47
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 48 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 106
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 107 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 162
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 163 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
L +L + +L++V EY G + HLR G+ + AR QI L E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ KV DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 110
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 111 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 167 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 219
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTG 242
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
L +L + +L++V EY G + HLR G+ + AR QI L E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ KV DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 35 SKVTTVVATPGQGP---DRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGEL 81
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 82 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 140
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 141 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 196
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 197 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 251
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 13 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 59
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 60 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 118
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 119 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 174
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 175 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 229
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 18/198 (9%)
Query: 492 FSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKEFLA----ELKVLTHVHHLNLV 545
F+ ++IG+G FG V+ E AIK +D++ +++ + E+ VL+ +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 546 RLIG-YCVEGSLFLVYEYIENGNLNQHLR-GSGKDTLTWSARMQIALDSARGLEYIHEHT 603
R G Y L+++ EY+ G+ L+ G ++T + +I +GL+Y+H
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL----KGLDYLHSER 136
Query: 604 VPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQYG 662
IHRDIK AN+L+ + K+ADFG+A +LT+ + VGT +M PE +
Sbjct: 137 ---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQS 191
Query: 663 EVSPKIDVYAFGVVLYEL 680
K D+++ G+ EL
Sbjct: 192 AYDFKADIWSLGITAIEL 209
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 14 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 60
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 61 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 119
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 120 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 175
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 176 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 230
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 29 SKVTTVVATPGQGP---DRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGEL 75
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 76 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 134
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 135 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 190
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 191 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 245
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 117/242 (48%), Gaps = 40/242 (16%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMDMQASKEFLA-----ELKVLTHVHHLNLVRLIG- 549
+G G +GAV A G K AIKK+ E A EL++L H+ H N++ L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 550 YCVEGSL------FLVYEYI--ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
+ + +L +LV ++ + G L +H + G+D + + + +GL YIH
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEK-LGEDRIQF-----LVYQMLKGLRYIHA 146
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP N+ ++++ K+ DFGLA+ + S V T Y PE
Sbjct: 147 AGI---IHRDLKPGNLAVNEDCELKILDFGLARQAD----SEMXGXVVTRWYRAPEVILN 199
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR--QPDPREDLQ 718
+ + +D+++ G ++ E+I T +T+ + + + +E+++ P E +Q
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMI--------TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251
Query: 719 RL 720
RL
Sbjct: 252 RL 253
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 59/303 (19%)
Query: 490 NDFSMGNKIGQGGFGAVF----YAELRGEKA---AIKKMDMQA----SKEFLAELKVLTH 538
N S G +G G FG V Y ++ + A A+K + A + ++ELKVL++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 539 V-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWS------------- 583
+ +H+N+V L+G C + G ++ EY G+L LR +D+ S
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELA 164
Query: 584 ----ARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639
+ + A+G+ ++ IHRD+ NIL+ K+ DFGLA+ +
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 640 SASV---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
S V + RL +M PE + + DV+++G+ L+EL S + +
Sbjct: 222 SNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---PYPGMPV 276
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ + +E R P + D + + C +P RP+ +
Sbjct: 277 DSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPTFK 319
Query: 757 AIV 759
IV
Sbjct: 320 QIV 322
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 35 SKVTTVVATPGQGP---DRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGEL 81
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 82 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 140
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 141 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 196
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 197 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 251
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 1 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 47
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 48 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 106
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 107 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 162
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 163 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 59/303 (19%)
Query: 490 NDFSMGNKIGQGGFGAVF----YAELRGEKA---AIKKMDMQA----SKEFLAELKVLTH 538
N S G +G G FG V Y ++ + A A+K + A + ++ELKVL++
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 539 V-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWS------------- 583
+ +H+N+V L+G C + G ++ EY G+L LR +D+ S
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELA 141
Query: 584 ----ARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639
+ + A+G+ ++ IHRD+ NIL+ K+ DFGLA+ +
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 640 SASV---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
S V + RL +M PE + + DV+++G+ L+EL S + +
Sbjct: 199 SNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---PYPGMPV 253
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ + +E R P + D + + C +P RP+ +
Sbjct: 254 DSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPTFK 296
Query: 757 AIV 759
IV
Sbjct: 297 QIV 299
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 93
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 94 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 150 ADI---IHRDLKPSNLAVNEDSELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 202
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTG 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 37 SKVTTVVATPGQGP---DRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGEL 83
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 84 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 142
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 143 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 198
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 199 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 253
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 129/292 (44%), Gaps = 44/292 (15%)
Query: 491 DFSMGNKIGQGGFGAVF---------YAELRGEKAAIKKMD---MQASKEFLAELKVLTH 538
D +GQG F +F Y +L + +K +D S+ F +++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 539 VHHLNLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
+ H +LV G CV G LV E+++ G+L+ +L+ K+ + ++++A A +
Sbjct: 69 LSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAAAMH 127
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG-SASVHTR--LVGTFGYM 654
++ E+T+ IH ++ NIL+ + K + KL++ G S +V + L ++
Sbjct: 128 FLEENTL---IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 655 PPEYAQYGE-VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713
PPE + + ++ D ++FG L+E+ S + + + +S + +E+ + P P
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL----SALDSQRKLQFYEDRHQLPAP 240
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ ++A L C P RPS RAI+ L +L
Sbjct: 241 K-------------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 13 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 59
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 60 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 118
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 119 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 174
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 175 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 229
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 42/230 (18%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGE-------KAAIKKMDMQASKE----FLAELKVLTH 538
N+ G +G G FG V A G K A+K + A + ++ELK+++H
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 539 V-HHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQHLR-----------GSGKDT------ 579
+ H N+V L+G C G + ++ EY G+L LR G+D
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 580 ----LTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635
L + + A+G+ ++ IHRD+ N+L+ AK+ DFGLA+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 636 TEVGSASV---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
S + + RL +M PE + + DV+++G++L+E+ S
Sbjct: 208 IMNDSNYIVKGNARL--PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 1 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 47
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 48 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 106
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 107 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 162
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 163 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 107
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 108 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ V T Y PE
Sbjct: 164 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGX----VATRWYRAPEIMLN 216
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTG 239
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 39 SKVTTVVATPGQGP---DRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGEL 85
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 86 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 144
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 145 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 200
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 201 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 255
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 6 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 52
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 53 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 111
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 112 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 167
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 168 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 222
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 5 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 51
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 52 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 110
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 111 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 166
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 167 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 221
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 106/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 1 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 47
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGS-------LFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + L LV +Y+
Sbjct: 48 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVY 106
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 107 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 162
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 163 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 59/303 (19%)
Query: 490 NDFSMGNKIGQGGFGAVF----YAELRGEKA---AIKKMDMQA----SKEFLAELKVLTH 538
N S G +G G FG V Y ++ + A A+K + A + ++ELKVL++
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 539 V-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWS------------- 583
+ +H+N+V L+G C + G ++ EY G+L LR +D+ S
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELA 164
Query: 584 ----ARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639
+ + A+G+ ++ IHRD+ NIL+ K+ DFGLA+ +
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 640 SASV---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
S V + RL +M PE + + DV+++G+ L+EL S + +
Sbjct: 222 SNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---PYPGMPV 276
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ + +E R P + D + + C +P RP+ +
Sbjct: 277 DSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPTFK 319
Query: 757 AIV 759
IV
Sbjct: 320 QIV 322
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 30/214 (14%)
Query: 498 IGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLI-GYC 551
+G G FG V E L+ IK M+ +E E+ V+ + H NL++L +
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 552 VEGSLFLVYEYIENGNL-----NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+ + LV EY++ G L ++ + DT+ + ++ G+ ++H+ +
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI------CEGIRHMHQMYI-- 208
Query: 607 YIHRDIKPANIL-IDKNFRA-KVADFGLAKLTEVGSASVHTRLVGTFG---YMPPEYAQY 661
+H D+KP NIL ++++ + K+ DFGLA+ +L FG ++ PE Y
Sbjct: 209 -LHLDLKPENILCVNRDAKQIKIIDFGLAR-----RYKPREKLKVNFGTPEFLAPEVVNY 262
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT 695
VS D+++ GV+ Y L+S + + N+ T
Sbjct: 263 DFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET 296
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 98/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 93
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 94 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 150 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 202
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLT 224
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 107/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 80 SKVTTVVATPGQGP---DRPQEVSYTDT----------KVIGNGSFGVVYQAKLCDSGEL 126
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q + EL+++ + H N+VRL + E L LV +Y+
Sbjct: 127 VAIKKV-LQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 185
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 186 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 241
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 242 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 296
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 24/206 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEF------LAELKVLTHVHH 541
+ F +G G FG V + G A+K +D Q + L E ++L V+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 542 LNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARM---QIALDSARGLE 597
L +L + +L++V EY G + HLR G+ AR QI L E
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP-HARFYAAQIVLT----FE 156
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H + I+RD+KP N++ID+ KV DFG AK + + L GT Y+ PE
Sbjct: 157 YLHSLDL---IYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWX----LCGTPEYLAPE 209
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ +D +A GV++YE+ +
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 59/303 (19%)
Query: 490 NDFSMGNKIGQGGFGAVF----YAELRGEKA---AIKKMDMQA----SKEFLAELKVLTH 538
N S G +G G FG V Y ++ + A A+K + A + ++ELKVL++
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 539 V-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWS------------- 583
+ +H+N+V L+G C + G ++ EY G+L LR +D+ S
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELA 159
Query: 584 ----ARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639
+ + A+G+ ++ IHRD+ NIL+ K+ DFGLA+ +
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 640 SASV---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
S V + RL +M PE + + DV+++G+ L+EL S + +
Sbjct: 217 SNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---PYPGMPV 271
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ + +E R P + D + + C +P RP+ +
Sbjct: 272 DSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPTFK 314
Query: 757 AIV 759
IV
Sbjct: 315 QIV 317
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 59/303 (19%)
Query: 490 NDFSMGNKIGQGGFGAVF----YAELRGEKA---AIKKMDMQA----SKEFLAELKVLTH 538
N S G +G G FG V Y ++ + A A+K + A + ++ELKVL++
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 539 V-HHLNLVRLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWS------------- 583
+ +H+N+V L+G C + G ++ EY G+L LR +D+ S
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR-RKRDSFICSKTSPAIMEDDELA 157
Query: 584 ----ARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639
+ + A+G+ ++ IHRD+ NIL+ K+ DFGLA+ +
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 640 SASV---HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
S V + RL +M PE + + DV+++G+ L+EL S + +
Sbjct: 215 SNYVVKGNARL--PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS---PYPGMPV 269
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756
+ + +E R P + D + + C +P RP+ +
Sbjct: 270 DSKFYKMIKEGFRMLSPEHAPAEMYD-----------------IMKTCWDADPLKRPTFK 312
Query: 757 AIV 759
IV
Sbjct: 313 QIV 315
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ D+GLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDYGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 110
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 111 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ V T Y PE
Sbjct: 167 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGY----VATRWYRAPEIMLN 219
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTG 242
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 108/225 (48%), Gaps = 28/225 (12%)
Query: 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--------ASKEFLAELKVLTHVHH 541
+ + IG+G F V R G++ A+K +D+ ++++ E + + H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 542 LNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR-----MQIALDSARG 595
++V L+ Y +G L++V+E+++ +L + +S M+ L++ R
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR- 144
Query: 596 LEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLA-KLTEVGSASVHTRLVGTF 651
Y H++ + IHRD+KP N+L+ + + K+ DFG+A +L E S V VGT
Sbjct: 145 --YCHDNNI---IHRDVKPENVLLASKENSAPVKLGDFGVAIQLGE--SGLVAGGRVGTP 197
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
+M PE + +DV+ GV+L+ L+S T E + E
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE 242
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 102/233 (43%), Gaps = 27/233 (11%)
Query: 465 AAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAV--FYAELRGEKAAIKKMD 522
PGV G VE + ++ IG+G +G V Y +R + AIKK+
Sbjct: 23 VGPGVPG-----EVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS 77
Query: 523 MQASKEF----LAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKD 578
+ + L E+++L H N++ + +L E + + + Q L +
Sbjct: 78 PFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTL----EAMRDVYIVQDLMETDLY 133
Query: 579 TLTWSARMQ------IALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGL 632
L S ++ RGL+YIH V +HRD+KP+N+LI+ K+ DFGL
Sbjct: 134 KLLKSQQLSNDHICYFLYQILRGLKYIHSANV---LHRDLKPSNLLINTTCDLKICDFGL 190
Query: 633 AKLT--EVGSASVHTRLVGTFGYMPPEYAQYGE-VSPKIDVYAFGVVLYELIS 682
A++ E T V T Y PE + + ID+++ G +L E++S
Sbjct: 191 ARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 106/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 1 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 47
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q EL+++ + H N+VRL + E L LV +Y+
Sbjct: 48 VAIKKV-LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 106
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 107 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 162
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 163 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 106/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 1 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 47
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q EL+++ + H N+VRL + E L LV +Y+
Sbjct: 48 VAIKKV-LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVY 106
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 107 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 162
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 163 KLCDFGSAKQLVRGEPNVS--YICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 106/238 (44%), Gaps = 35/238 (14%)
Query: 458 SESAALVAAPGVTGITVDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEK 515
S+ +VA PG D+ E SY + IG G FG V+ A+L GE
Sbjct: 1 SKVTTVVATPGQGP---DRPQEVSYTD----------TKVIGNGSFGVVYQAKLCDSGEL 47
Query: 516 AAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV-------EGSLFLVYEYIENG-- 566
AIKK+ +Q EL+++ + H N+VRL + E L LV +Y+
Sbjct: 48 VAIKKV-LQGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVY 106
Query: 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA- 625
+ +H K TL R L YIH + HRDIKP N+L+D +
Sbjct: 107 RVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIHSFGI---CHRDIKPQNLLLDPDTAVL 162
Query: 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELI 681
K+ DFG AK G +V + + Y PE +G + + IDV++ G VL EL+
Sbjct: 163 KLCDFGSAKQLVRGEPNVSX--ICSRYYRAPELI-FGATDYTSSIDVWSAGCVLAELL 217
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY 661
+ IHRD+KP+N+ ++++ K+ DFGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 662 G-EVSPKIDVYAFGVVLYELIS 682
+ +D+++ G ++ EL++
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLT 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK----AAIKKMDMQASKEFLAELKVLTHV-----H 540
DF + IG+G + V L+ + K ++ E + ++ HV +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGK----DTLTWSARMQIALDSARG 595
H LV L + E LF V EY+ G+L H++ K +SA + +AL+
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN---- 135
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
Y+HE + I+RD+K N+L+D K+ D+G+ K + + GT Y+
Sbjct: 136 --YLHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIA 189
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE + + +D +A GV+++E+++
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAG 217
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 23/211 (10%)
Query: 490 NDFSMGNKIGQGGFGAVF-------------YAELRGEKAAIKKMDMQASKEFLAELKVL 536
+F + +G G +G VF YA +KA I + + ++ E +VL
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQ-KAKTTEHTRTERQVL 112
Query: 537 THVHHLNLVRLIGYC--VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
H+ + + Y E L L+ +YI G L HL S ++ T +
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL--SQRERFTEHEVQIYVGEIVL 170
Query: 595 GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
LE++H+ + I+RDIK NIL+D N + DFGL+K GT YM
Sbjct: 171 ALEHLHKLGI---IYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 655 PPEYAQYGEV--SPKIDVYAFGVVLYELISA 683
P+ + G+ +D ++ GV++YEL++
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK----AAIKKMDMQASKEFLAELKVLTHV-----H 540
DF + IG+G + V L+ + K ++ E + ++ HV +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGK----DTLTWSARMQIALDSARG 595
H LV L + E LF V EY+ G+L H++ K +SA + +AL+
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN---- 120
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
Y+HE + I+RD+K N+L+D K+ D+G+ K + + GT Y+
Sbjct: 121 --YLHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIA 174
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE + + +D +A GV+++E+++
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAG 202
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAA--------IKKMDMQASKEF---LAELKVLTH 538
N+F +G+G FG V L EKA +KK + A E L E +VL +
Sbjct: 148 NEFEYLKLLGKGTFGKVI---LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 539 VHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--- 594
H L L + L V EY G L HL S + D AR
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----------SRERVFSEDRARFYG 254
Query: 595 -----GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG 649
L+Y+H VY RD+K N+++DK+ K+ DFGL K A++ T G
Sbjct: 255 AEIVSALDYLHSEKNVVY--RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCG 311
Query: 650 TFGYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681
T Y+ PE + + +D + GVV+YE++
Sbjct: 312 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK----AAIKKMDMQASKEFLAELKVLTHV-----H 540
DF + IG+G + V L+ + K ++ E + ++ HV +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGK----DTLTWSARMQIALDSARG 595
H LV L + E LF V EY+ G+L H++ K +SA + +AL+
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN---- 124
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
Y+HE + I+RD+K N+L+D K+ D+G+ K + + GT Y+
Sbjct: 125 --YLHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIA 178
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE + + +D +A GV+++E+++
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAG 206
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 491 DFSMGNKIGQGGFGAVF---------YAELRGEKAAIKKMD---MQASKEFLAELKVLTH 538
D +GQG F +F Y +L + +K +D S+ F +++
Sbjct: 9 DLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSK 68
Query: 539 VHHLNLVRLIGYCVEGSL-FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
+ H +LV G C G LV E+++ G+L+ +L+ K+ + ++++A A +
Sbjct: 69 LSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK-KNKNCINILWKLEVAKQLAWAMH 127
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG-SASVHTR--LVGTFGYM 654
++ E+T+ IH ++ NIL+ + K + KL++ G S +V + L ++
Sbjct: 128 FLEENTL---IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWV 184
Query: 655 PPEYAQYGE-VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713
PPE + + ++ D ++FG L+E+ S + + + +S + +E+ + P P
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPL----SALDSQRKLQFYEDRHQLPAP 240
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765
+ ++A L C P RPS RAI+ L +L
Sbjct: 241 K-------------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 91/212 (42%), Gaps = 36/212 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAA--------IKKMDMQASKEF---LAELKVLTH 538
N+F +G+G FG V L EKA +KK + A E L E +VL +
Sbjct: 151 NEFEYLKLLGKGTFGKVI---LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 539 VHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--- 594
H L L + L V EY G L HL S + D AR
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----------SRERVFSEDRARFYG 257
Query: 595 -----GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG 649
L+Y+H VY RD+K N+++DK+ K+ DFGL K A++ T G
Sbjct: 258 AEIVSALDYLHSEKNVVY--RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCG 314
Query: 650 TFGYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681
T Y+ PE + + +D + GVV+YE++
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 25/197 (12%)
Query: 498 IGQGGFGAVFYAELR--GEKAA---IKKMDMQASKEFLAELKVLTHVHHLNLVRLIG-YC 551
+G G F VF + R G+ A IKK E+ VL + H N+V L Y
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 552 VEGSLFLVYEYIENGNLNQHLRGSG----KDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
+LV + + G L + G KD S +Q L + + Y+HE+ +
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYTEKDA---SLVIQQVLSAVK---YLHENGI--- 127
Query: 608 IHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
+HRD+KP N+L ++N + + DFGL+K+ + G + + GT GY+ PE
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---IMSTACGTPGYVAPEVLAQKPY 184
Query: 665 SPKIDVYAFGVVLYELI 681
S +D ++ GV+ Y L+
Sbjct: 185 SKAVDCWSIGVITYILL 201
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 37/206 (17%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMDMQASKEFLA-----ELKVLTHVHHLNLVRLIGY 550
+G G +G+V A + GEK AIKK+ E A EL +L H+ H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 551 CVEGS-------LFLVYEYIENGNLNQHLRGSGKDTLTWSA-RMQ-IALDSARGLEYIHE 601
S +LV +++ Q + G L +S ++Q + +GL+YIH
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDL--QKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE---- 657
V +HRD+KP N+ ++++ K+ DFGLA+ + + T V T Y PE
Sbjct: 145 AGV---VHRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRAPEVILS 197
Query: 658 YAQYGEVSPKIDVYAFGVVLYELISA 683
+ Y + +D+++ G ++ E+++
Sbjct: 198 WMHYNQT---VDIWSVGCIMAEMLTG 220
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK----AAIKKMDMQASKEFLAELKVLTHV-----H 540
DF + IG+G + V L+ + K ++ E + ++ HV +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGK----DTLTWSARMQIALDSARG 595
H LV L + E LF V EY+ G+L H++ K +SA + +AL+
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN---- 167
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
Y+HE + I+RD+K N+L+D K+ D+G+ K + + GT Y+
Sbjct: 168 --YLHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIA 221
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE + + +D +A GV+++E+++
Sbjct: 222 PEILRGEDYGFSVDWWALGVLMFEMMAG 249
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 23/199 (11%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMDMQASKEFLA-----ELKVLTHVHHLNLVRLIG- 549
+G G +G+V A + GEK AIKK+ E A EL +L H+ H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 550 YCVEGSLFLVYE-YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608
+ SL Y+ Y+ + L+ + + +GL+YIH V +
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGV---V 166
Query: 609 HRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE----YAQYGEV 664
HRD+KP N+ ++++ K+ DFGLA+ + + T V T Y PE + Y +
Sbjct: 167 HRDLKPGNLAVNEDCELKILDFGLARHAD----AEMTGYVVTRWYRAPEVILSWMHYNQT 222
Query: 665 SPKIDVYAFGVVLYELISA 683
+D+++ G ++ E+++
Sbjct: 223 ---VDIWSVGCIMAEMLTG 238
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ DF LA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDFYLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 37/222 (16%)
Query: 492 FSMGNK------IGQGGFGAVFYAELRG--EKAAIKKM---DMQASKEFLAELKVLTHVH 540
F +G++ +G GG G VF A ++ AIKK+ D Q+ K L E+K++ +
Sbjct: 7 FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLD 66
Query: 541 HLNLVRL--------------IGYCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR 585
H N+V++ +G E S+++V EY+E N +G L AR
Sbjct: 67 HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP---LLEEHAR 123
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILID-KNFRAKVADFGLAKLTE---VGSA 641
+ RGL+YIH V +HRD+KPAN+ I+ ++ K+ DFGLA++ +
Sbjct: 124 L-FMYQLLRGLKYIHSANV---LHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKG 179
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
+ LV + P + ID++A G + E+++
Sbjct: 180 HLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTG 221
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 130/312 (41%), Gaps = 51/312 (16%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAI--------KKMDMQASKEFLAELKVLTHV--HH 541
+S+ +IG GG VF ++ EK I ++ D Q + E+ L + H
Sbjct: 14 YSILKQIGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 71
Query: 542 LNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
++RL Y + +Y +E GN++ + K ++ R + + IH+
Sbjct: 72 DKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
H + +H D+KPAN LI K+ DFG+A + + S V VGT YMPPE +
Sbjct: 130 HGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 185
Query: 661 YGEVSPK-----------IDVYAFGVVLYEL-------------ISAMEAVVKTNETITE 696
S + DV++ G +LY + IS + A++ N I
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 245
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPR-LGDDYPIDSVRKMARLARACTQENPQLRPSM 755
++VL+ R+ QR+ P L Y + ++A+ T+E M
Sbjct: 246 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE-------M 298
Query: 756 RAIVVALMTLSS 767
+ ++ L+ L+S
Sbjct: 299 KYVLGQLVGLNS 310
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ FGLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILGFGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 21/210 (10%)
Query: 485 LAKAT-NDFSMGNKIGQGGFGAVFYAELRGEKAA--------IKKMDMQASKEF---LAE 532
+A+ T N+F +G+G FG V L EKA +KK + A E L E
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVI---LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 59
Query: 533 LKVLTHVHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
+VL + H L L + L V EY G L HL S + + +
Sbjct: 60 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAE 117
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
L+Y+H VY RD+K N+++DK+ K+ DFGL K + + GT
Sbjct: 118 IVSALDYLHSEKNVVY--RDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTP 174
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681
Y+ PE + + +D + GVV+YE++
Sbjct: 175 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 204
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 130/312 (41%), Gaps = 51/312 (16%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAI--------KKMDMQASKEFLAELKVLTHV--HH 541
+S+ +IG GG VF ++ EK I ++ D Q + E+ L + H
Sbjct: 11 YSILKQIGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 68
Query: 542 LNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
++RL Y + +Y +E GN++ + K ++ R + + IH+
Sbjct: 69 DKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
H + +H D+KPAN LI K+ DFG+A + + S V VGT YMPPE +
Sbjct: 127 HGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182
Query: 661 YGEVSPK-----------IDVYAFGVVLYEL-------------ISAMEAVVKTNETITE 696
S + DV++ G +LY + IS + A++ N I
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 242
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPR-LGDDYPIDSVRKMARLARACTQENPQLRPSM 755
++VL+ R+ QR+ P L Y + ++A+ T+E M
Sbjct: 243 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE-------M 295
Query: 756 RAIVVALMTLSS 767
+ ++ L+ L+S
Sbjct: 296 KYVLGQLVGLNS 307
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAI--------KKMDMQASKEFLAELKVLTHV--HH 541
+S+ +IG GG VF ++ EK I ++ D Q + E+ L + H
Sbjct: 30 YSILKQIGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 542 LNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
++RL Y + +Y +E GN++ + K ++ R + + IH+
Sbjct: 88 DKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
H + +H D+KPAN LI K+ DFG+A + + S V VGT YMPPE +
Sbjct: 146 HGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201
Query: 661 YGEVSPK-----------IDVYAFGVVLYEL-------------ISAMEAVVKTNETITE 696
S + DV++ G +LY + IS + A++ N I
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPR-LGDDYPIDSVRKMARLARACTQE 747
++VL+ R+ QR+ P L Y + ++A+ T+E
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE 313
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 99/208 (47%), Gaps = 25/208 (12%)
Query: 489 TNDFSMGNKIGQGGFGAV--FYAELRGEKAA-----IKKMDMQASKEFLAELKVLTHVHH 541
T ++ + ++G+G F V L G++ A KK+ + ++ E ++ + H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 542 LNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRG----SGKDTLTWSARMQIALDSARGL 596
N+VRL EG +L+++ + G L + + S D S +Q L++
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA---SHCIQQILEAV--- 123
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRA---KVADFGLAKLTEVGSASVHTRLVGTFGY 653
+H H + V +HR++KP N+L+ + K+ADFGLA E G GT GY
Sbjct: 124 --LHCHQMGV-VHRNLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGY 179
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
+ PE + +D++A GV+LY L+
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILL 207
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ D GLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDAGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLT 218
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-------ELRGEKAAIKKMDMQASKEFLAELKVLTHVHH 541
T+++ + IG+G F V E + KK+ + ++ E ++ + H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 542 LNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRG----SGKDTLTWSARMQIALDSARGL 596
N+VRL EG +LV++ + G L + + S D S +Q L++
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA---SHCIQQILEAV--- 116
Query: 597 EYIHEHTVPVYIHRDIKPANILID---KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
+H H + V +HRD+KP N+L+ K K+ADFGLA + G GT GY
Sbjct: 117 --LHCHQMGV-VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGY 172
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
+ PE + +D++A GV+LY L+
Sbjct: 173 LSPEVLRKEAYGKPVDIWACGVILYILL 200
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKE-----FLAELKVLTHVHHLNLVR 546
+G IG+G FG V++ GE AI+ +D++ E F E+ H N+V
Sbjct: 35 LEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVL 93
Query: 547 LIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPV 606
+G C+ + + G + K L + QIA + +G+ Y+H +
Sbjct: 94 FMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGI-- 151
Query: 607 YIHRDIKPANILIDKNFRAKVADFGLAKLTEV---GSASVHTRLV-GTFGYMPPEYAQYG 662
+H+D+K N+ D N + + DFGL ++ V G R+ G ++ PE +
Sbjct: 152 -LHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIR-- 207
Query: 663 EVSPKI-----------DVYAFGVVLYELISAMEAVVKTN 691
++SP DV+A G + YEL A E KT
Sbjct: 208 QLSPDTEEDKLPFSKHSDVFALGTIWYEL-HAREWPFKTQ 246
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAA--------IKKMDMQASKEF---LAELKVLTH 538
N+F +G+G FG V L EKA +KK + A E L E +VL +
Sbjct: 10 NEFEYLKLLGKGTFGKVI---LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 66
Query: 539 VHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
H L L + L V EY G L HL S + + + L+
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALD 124
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H VY RD+K N+++DK+ K+ DFGL K + + GT Y+ PE
Sbjct: 125 YLHSEKNVVY--RDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPE 181
Query: 658 YAQYGEVSPKIDVYAFGVVLYELI 681
+ + +D + GVV+YE++
Sbjct: 182 VLEDNDYGRAVDWWGLGVVMYEMM 205
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ D GLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDRGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 20/204 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEKAA--------IKKMDMQASKEF---LAELKVLTH 538
N+F +G+G FG V L EKA +KK + A E L E +VL +
Sbjct: 8 NEFEYLKLLGKGTFGKVI---LVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 539 VHHLNLVRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
H L L + L V EY G L HL S + + + L+
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALD 122
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
Y+H VY RD+K N+++DK+ K+ DFGL K + + GT Y+ PE
Sbjct: 123 YLHSEKNVVY--RDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPE 179
Query: 658 YAQYGEVSPKIDVYAFGVVLYELI 681
+ + +D + GVV+YE++
Sbjct: 180 VLEDNDYGRAVDWWGLGVVMYEMM 203
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 484 ELAKATNDFSMGNKIGQGGFG-----------AVFYAELRGEKAAIKKMDMQASKEFLAE 532
+L D+ + IG+G FG V+ +L + IK+ D S F E
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD---SAFFWEE 119
Query: 533 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
++ + +V+L + + L++V EY+ G+L + S D AR A +
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTA-E 176
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGT 650
L+ IH +IHRD+KP N+L+DK+ K+ADFG K+ + G T VGT
Sbjct: 177 VVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGT 232
Query: 651 FGYMPPEYAQY----GEVSPKIDVYAFGVVLYELI 681
Y+ PE + G + D ++ GV LYE++
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 22/200 (11%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLVRLIGYC 551
IG+G +G V Y + + AIKK+ + + L E+K+L H N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 552 VEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHEHTVP 605
++ E +++ L HL G+ L + + RGL+YIH V
Sbjct: 111 RAPTI----EQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANV- 165
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYAQYGE 663
+HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE +
Sbjct: 166 --LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 223
Query: 664 -VSPKIDVYAFGVVLYELIS 682
+ ID+++ G +L E++S
Sbjct: 224 GYTKSIDIWSVGCILAEMLS 243
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAI--------KKMDMQASKEFLAELKVLTHV--HH 541
+S+ +IG GG VF ++ EK I ++ D Q + E+ L + H
Sbjct: 10 YSILKQIGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 67
Query: 542 LNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
++RL Y + +Y +E GN++ + K ++ R + + IH+
Sbjct: 68 DKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
H + +H D+KPAN LI K+ DFG+A + + S V VGT YMPPE +
Sbjct: 126 HGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 181
Query: 661 YGEVSPK-----------IDVYAFGVVLYEL-------------ISAMEAVVKTNETITE 696
S + DV++ G +LY + IS + A++ N I
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 241
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPR-LGDDYPIDSVRKMARLARACTQE 747
++VL+ R+ QR+ P L Y + ++A+ T+E
Sbjct: 242 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE 293
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 44/292 (15%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAI--------KKMDMQASKEFLAELKVLTHV--HH 541
+S+ +IG GG VF ++ EK I ++ D Q + E+ L + H
Sbjct: 58 YSILKQIGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 542 LNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
++RL Y + +Y +E GN++ + K ++ R + + IH+
Sbjct: 116 DKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
H + +H D+KPAN LI K+ DFG+A + + S V VGT YMPPE +
Sbjct: 174 HGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 661 YGEVSPK-----------IDVYAFGVVLYEL-------------ISAMEAVVKTNETITE 696
S + DV++ G +LY + IS + A++ N I
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPR-LGDDYPIDSVRKMARLARACTQE 747
++VL+ R+ QR+ P L Y + ++A+ T+E
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE 341
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGY 550
+G G +G+V A G + A+KK+ + +K EL++L H+ H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL-- 87
Query: 551 CVEGSLFLVYEYIENGN---LNQHLRGSGKDTLTWSARMQ------IALDSARGLEYIHE 601
+F +E N L HL G+ + + ++ + RGL+YIH
Sbjct: 88 ----DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-Q 660
+ IHRD+KP+N+ ++++ K+ D GLA+ T+ T V T Y PE
Sbjct: 144 ADI---IHRDLKPSNLAVNEDCELKILDGGLARHTD----DEMTGYVATRWYRAPEIMLN 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+ + +D+++ G ++ EL++
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTG 219
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 130/312 (41%), Gaps = 51/312 (16%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAI--------KKMDMQASKEFLAELKVLTHV--HH 541
+S+ +IG GG VF ++ EK I ++ D Q + E+ L + H
Sbjct: 58 YSILKQIGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 542 LNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
++RL Y + +Y +E GN++ + K ++ R + + IH+
Sbjct: 116 DKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
H + +H D+KPAN LI K+ DFG+A + + S V VGT YMPPE +
Sbjct: 174 HGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 661 YGEVSPK-----------IDVYAFGVVLYEL-------------ISAMEAVVKTNETITE 696
S + DV++ G +LY + IS + A++ N I
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPR-LGDDYPIDSVRKMARLARACTQENPQLRPSM 755
++VL+ R+ QR+ P L Y + ++A+ T+E M
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE-------M 342
Query: 756 RAIVVALMTLSS 767
+ ++ L+ L+S
Sbjct: 343 KYVLGQLVGLNS 354
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 484 ELAKATNDFSMGNKIGQGGFG-----------AVFYAELRGEKAAIKKMDMQASKEFLAE 532
+L D+ + IG+G FG V+ +L + IK+ D S F E
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD---SAFFWEE 124
Query: 533 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
++ + +V+L + + L++V EY+ G+L + S D AR A +
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTA-E 181
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGT 650
L+ IH +IHRD+KP N+L+DK+ K+ADFG K+ + G T VGT
Sbjct: 182 VVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGT 237
Query: 651 FGYMPPEYAQY----GEVSPKIDVYAFGVVLYELI 681
Y+ PE + G + D ++ GV LYE++
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 27/215 (12%)
Query: 484 ELAKATNDFSMGNKIGQGGFG-----------AVFYAELRGEKAAIKKMDMQASKEFLAE 532
+L D+ + IG+G FG V+ +L + IK+ D S F E
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSD---SAFFWEE 124
Query: 533 LKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
++ + +V+L + + L++V EY+ G+L + S D AR A +
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTA-E 181
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGT 650
L+ IH +IHRD+KP N+L+DK+ K+ADFG K+ + G T VGT
Sbjct: 182 VVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGT 237
Query: 651 FGYMPPEYAQY----GEVSPKIDVYAFGVVLYELI 681
Y+ PE + G + D ++ GV LYE++
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 98/207 (47%), Gaps = 30/207 (14%)
Query: 497 KIGQGGFGAVFYAELRG---EKA--AIKKMDMQASK-------------EFLAELKVLTH 538
K+G G +G V + + EKA IKK + E E+ +L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 539 VHHLNLVRLIGYCVEGSLF-LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
+ H N+++L + F LV E+ E G L + + K +A + + S G+
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILS--GIC 160
Query: 598 YIHEHTVPVYIHRDIKPANILID-KN--FRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H+H + +HRDIKP NIL++ KN K+ DFGL+ + RL GT Y+
Sbjct: 161 YLHKHNI---VHRDIKPENILLENKNSLLNIKIVDFGLSSFFS-KDYKLRDRL-GTAYYI 215
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + + + K DV++ GV++Y L+
Sbjct: 216 APEVLK-KKYNEKCDVWSCGVIMYILL 241
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 492 FSMGNKIGQGGFGAV--FYAELRGEKAA-----IKKMDMQASKEFLAELKVLTHVHHLNL 544
+ + ++G+G F V L G++ A KK+ + ++ E ++ + H N+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 545 VRLI-GYCVEGSLFLVYEYIENGNLNQHLRG----SGKDTLTWSARMQIALDSARGLEYI 599
VRL EG +L+++ + G L + + S D S +Q L++ +
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA---SHCIQQILEAV-----L 135
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRA---KVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
H H + V +HRD+KP N+L+ + K+ADFGLA E G GT GY+ P
Sbjct: 136 HCHQMGV-VHRDLKPENLLLASKLKGAAVKLADFGLAIEVE-GEQQAWFGFAGTPGYLSP 193
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E + +D++A GV+LY L+
Sbjct: 194 EVLRKDPYGKPVDLWACGVILYILL 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPAFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 43/285 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL-----RGEKAAIK--KMDM----QASKEFLAELKVLTH 538
D + K+G G FG V E + A+K K D+ +A +F+ E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H NL+RL G + + +V E G+L LR L + A+ A G+ Y
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLL-GTLSRYAVQVAEGMGY 126
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV---HTRLVGTFGYM 654
+ +IHRD+ N+L+ K+ DFGL + L + V H ++ F +
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWC 181
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDP 713
PE + S D + FGV L+E+ + E + N + ++L + D
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------------QILHKID- 228
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
++ +RL P +D P D M + C P+ RP+ A+
Sbjct: 229 -KEGERLPRP---EDCPQDIYNVMVQ----CWAHKPEDRPTFVAL 265
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK----------- 634
+ I + A +E++H + +HRD+KP+NI + KV DFGL
Sbjct: 167 LHIFIQIAEAVEFLHSKGL---MHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694
LT + + + H VGT YM PE S K+D+++ G++L+EL+ + ++ I
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 695 TESTGLVALFEEVLRQPDPREDL--QRLVDP 723
T+ L F + Q P+E + Q ++ P
Sbjct: 284 TDVRNLK--FPLLFTQKYPQEHMMVQDMLSP 312
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 486 AKATNDFSMGNKIGQGGFGAVFYAELRGEKA--AIKKMDMQ----ASKEFLAELKVLTHV 539
++ DF +G+GGFG VF A+ + + AIK++ + A ++ + E+K L +
Sbjct: 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL 61
Query: 540 HHLNLVRLIGYCVE 553
H +VR +E
Sbjct: 62 EHPGIVRYFNAWLE 75
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 86/212 (40%), Gaps = 31/212 (14%)
Query: 490 NDFSMGNKIGQGGFGAVF----------------YAELRGEKAAIKKMDMQASKEFLAEL 533
F +++G G +G VF + RG K +K+ S E + +
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQ- 115
Query: 534 KVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSA 593
H VRL EG + + + +L QH G +L + D+
Sbjct: 116 -------HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGA-SLPEAQVWGYLRDTL 167
Query: 594 RGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
L ++H + +H D+KPANI + R K+ DFGL L E+G+A G Y
Sbjct: 168 LALAHLHSQGL---VHLDVKPANIFLGPRGRCKLGDFGL--LVELGTAGAGEVQEGDPRY 222
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISAME 685
M PE Q G DV++ G+ + E+ ME
Sbjct: 223 MAPELLQ-GSYGTAADVFSLGLTILEVACNME 253
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 43/285 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL-----RGEKAAIK--KMDM----QASKEFLAELKVLTH 538
D + K+G G FG V E + A+K K D+ +A +F+ E+ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H NL+RL G + + +V E G+L LR L + A+ A G+ Y
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLL-GTLSRYAVQVAEGMGY 130
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV---HTRLVGTFGYM 654
+ +IHRD+ N+L+ K+ DFGL + L + V H ++ F +
Sbjct: 131 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 185
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDP 713
PE + S D + FGV L+E+ + E + N + ++L + D
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------------QILHKID- 232
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
++ +RL P +D P D M + C P+ RP+ A+
Sbjct: 233 -KEGERLPRP---EDCPQDIYNVMVQ----CWAHKPEDRPTFVAL 269
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 43/285 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL-----RGEKAAIK--KMDM----QASKEFLAELKVLTH 538
D + K+G G FG V E + A+K K D+ +A +F+ E+ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H NL+RL G + + +V E G+L LR L + A+ A G+ Y
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLL-GTLSRYAVQVAEGMGY 136
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV---HTRLVGTFGYM 654
+ +IHRD+ N+L+ K+ DFGL + L + V H ++ F +
Sbjct: 137 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKV--PFAWC 191
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDP 713
PE + S D + FGV L+E+ + E + N + ++L + D
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------------QILHKID- 238
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
++ +RL P +D P D M + C P+ RP+ A+
Sbjct: 239 -KEGERLPRP---EDCPQDIYNVMVQ----CWAHKPEDRPTFVAL 275
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 100/217 (46%), Gaps = 33/217 (15%)
Query: 485 LAKATNDFSMGNKIGQGGFG-----------AVFYAELRGEKAAIKKMDMQASKEFLAEL 533
L D+ + IG+G FG V+ +L + IK+ D S F E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSD---SAFFWEER 126
Query: 534 KVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENG---NLNQHLRGSGKDTLTWSARMQIA 589
++ + +V+L + + L++V EY+ G NL + K ++A + +A
Sbjct: 127 DIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLA 186
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLV 648
LD+ IH + IHRD+KP N+L+DK+ K+ADFG K+ E G T V
Sbjct: 187 LDA------IHSMGL---IHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDT-AV 236
Query: 649 GTFGYMPPEYAQY----GEVSPKIDVYAFGVVLYELI 681
GT Y+ PE + G + D ++ GV L+E++
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 43/285 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL-----RGEKAAIK--KMDM----QASKEFLAELKVLTH 538
D + K+G G FG V E + A+K K D+ +A +F+ E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H NL+RL G + + +V E G+L LR L + A+ A G+ Y
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLL-GTLSRYAVQVAEGMGY 126
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV---HTRLVGTFGYM 654
+ +IHRD+ N+L+ K+ DFGL + L + V H ++ F +
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 181
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDP 713
PE + S D + FGV L+E+ + E + N + ++L + D
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------------QILHKID- 228
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
++ +RL P +D P D M + C P+ RP+ A+
Sbjct: 229 -KEGERLPRP---EDCPQDIYNVMVQ----CWAHKPEDRPTFVAL 265
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-------ELRGEKAAIKKMDMQASKEFLAELKVLTHVHH 541
T+++ + ++G+G F V E + KK+ + ++ E ++ + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 542 LNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRG----SGKDTLTWSARMQIALDSARGL 596
N+VRL EG +LV++ + G L + + S D S +Q L+S +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA---SHCIQQILES---V 116
Query: 597 EYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
+ H + + +HRD+KP N+L+ K K+ADFGLA + G GT GY
Sbjct: 117 NHCHLNGI---VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGY 172
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
+ PE + +D++A GV+LY L+
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILL 200
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 43/285 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL-----RGEKAAIK--KMDM----QASKEFLAELKVLTH 538
D + K+G G FG V E + A+K K D+ +A +F+ E+ +
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H NL+RL G + + +V E G+L LR L + A+ A G+ Y
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLL-GTLSRYAVQVAEGMGY 130
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV---HTRLVGTFGYM 654
+ +IHRD+ N+L+ K+ DFGL + L + V H ++ F +
Sbjct: 131 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 185
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDP 713
PE + S D + FGV L+E+ + E + N + ++L + D
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------------QILHKID- 232
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
++ +RL P +D P D M + C P+ RP+ A+
Sbjct: 233 -KEGERLPRP---EDCPQDIYNVMVQ----CWAHKPEDRPTFVAL 269
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE---FLAELKVLTHVHHLNLVR 546
+ + ++G G FG V+ A+ + G AA K ++ ++ +E ++ E+++L H +V+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 547 LIG-YCVEGSLFLVYEYIENGNLNQHL----RGSGKDTLTWSARMQIALDSARGLEYIHE 601
L+G Y +G L+++ E+ G ++ + RG + + R + L ++H
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHS 127
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE--YA 659
+ IHRD+K N+L+ ++ADFG++ + + +GT +M PE
Sbjct: 128 KRI---IHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 660 QYGEVSP---KIDVYAFGVVLYEL 680
+ + +P K D+++ G+ L E+
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEM 207
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 43/285 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL-----RGEKAAIK--KMDM----QASKEFLAELKVLTH 538
D + K+G G FG V E + A+K K D+ +A +F+ E+ +
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H NL+RL G + + +V E G+L LR L + A+ A G+ Y
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLL-GTLSRYAVQVAEGMGY 136
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV---HTRLVGTFGYM 654
+ +IHRD+ N+L+ K+ DFGL + L + V H ++ F +
Sbjct: 137 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 191
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDP 713
PE + S D + FGV L+E+ + E + N + ++L + D
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------------QILHKID- 238
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
++ +RL P +D P D M + C P+ RP+ A+
Sbjct: 239 -KEGERLPRP---EDCPQDIYNVMVQ----CWAHKPEDRPTFVAL 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 102/204 (50%), Gaps = 24/204 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE---FLAELKVLTHVHHLNLVR 546
+ + ++G G FG V+ A+ + G AA K ++ ++ +E ++ E+++L H +V+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 547 LIG-YCVEGSLFLVYEYIENGNLNQHL----RGSGKDTLTWSARMQIALDSARGLEYIHE 601
L+G Y +G L+++ E+ G ++ + RG + + R + L ++H
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHS 135
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE--YA 659
+ IHRD+K N+L+ ++ADFG++ + + +GT +M PE
Sbjct: 136 KRI---IHRDLKAGNVLMTLEGDIRLADFGVSA-KNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 660 QYGEVSP---KIDVYAFGVVLYEL 680
+ + +P K D+++ G+ L E+
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK------EFLAELKV 535
K + + +G ++G G F V + E AA IKK +AS+ E E+ +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSI 68
Query: 536 LTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
L V H N++ L Y + L+ E + G L L + K++L+
Sbjct: 69 LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILD 126
Query: 595 GLEYIHEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGT 650
G+ Y+H + H D+KP NI L+DKN K+ DFGLA E G + GT
Sbjct: 127 GVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGT 181
Query: 651 FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
++ PE Y + + D+++ GV+ Y L+S
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 120/285 (42%), Gaps = 43/285 (15%)
Query: 490 NDFSMGNKIGQGGFGAVFYAEL-----RGEKAAIK--KMDM----QASKEFLAELKVLTH 538
D + K+G G FG V E + A+K K D+ +A +F+ E+ +
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 539 VHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+ H NL+RL G + + +V E G+L LR L + A+ A G+ Y
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLL-GTLSRYAVQVAEGMGY 126
Query: 599 IHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-LTEVGSASV---HTRLVGTFGYM 654
+ +IHRD+ N+L+ K+ DFGL + L + V H ++ F +
Sbjct: 127 LESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKV--PFAWC 181
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDP 713
PE + S D + FGV L+E+ + E + N + ++L + D
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------------QILHKID- 228
Query: 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAI 758
++ +RL P +D P D M + C P+ RP+ A+
Sbjct: 229 -KEGERLPRP---EDCPQDIYNVMVQ----CWAHKPEDRPTFVAL 265
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 129
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 130 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 184
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA-------ELRGEKAAIKKMDMQASKEFLAELKVLTHVHH 541
T+++ + ++G+G F V E + KK+ + ++ E ++ + H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 542 LNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRG----SGKDTLTWSARMQIALDSARGL 596
N+VRL EG +LV++ + G L + + S D S +Q L+S +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA---SHCIQQILES---V 116
Query: 597 EYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
+ H + + +HRD+KP N+L+ K K+ADFGLA + G GT GY
Sbjct: 117 NHCHLNGI---VHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGY 172
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
+ PE + +D++A GV+LY L+
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILL 200
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 129
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 130 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 184
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 498 IGQGGFGAV---FYAELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIG 549
+G G +G+V + A LR +K A+KK+ + ++ EL++L H+ H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 550 YCVEGS-------LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
+ ++LV + +LN ++ L+ + RGL+YIH
Sbjct: 95 VFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQA---LSDEHVQFLVYQLLRGLKYIHSA 150
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-QY 661
+ IHRD+KP+N+ ++++ ++ DFGLA+ + T V T Y PE +
Sbjct: 151 GI---IHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTGYVATRWYRAPEIMLNW 203
Query: 662 GEVSPKIDVYAFGVVLYELISA 683
+ +D+++ G ++ EL+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQG 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 129/312 (41%), Gaps = 51/312 (16%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAI--------KKMDMQASKEFLAELKVLTHV--HH 541
+S+ +IG GG VF ++ EK I ++ D Q + E+ L + H
Sbjct: 58 YSILKQIGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 115
Query: 542 LNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
++RL Y + +Y +E GN++ + K ++ R + + IH+
Sbjct: 116 DKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQ 660
H + +H D+KPAN LI K+ DFG+A + + S V VG YMPPE +
Sbjct: 174 HGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229
Query: 661 YGEVSPK-----------IDVYAFGVVLYEL-------------ISAMEAVVKTNETITE 696
S + DV++ G +LY + IS + A++ N I
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPR-LGDDYPIDSVRKMARLARACTQENPQLRPSM 755
++VL+ R+ QR+ P L Y + ++A+ T+E M
Sbjct: 290 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE-------M 342
Query: 756 RAIVVALMTLSS 767
+ ++ L+ L+S
Sbjct: 343 KYVLGQLVGLNS 354
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK------EFLAELKV 535
K + + +G ++G G F V + E AA IKK +AS+ E E+ +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 536 LTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
L V H N++ L Y + L+ E + G L L + K++L+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILD 126
Query: 595 GLEYIHEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGT 650
G+ Y+H + H D+KP NI L+DKN K+ DFGLA E G + GT
Sbjct: 127 GVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGT 181
Query: 651 FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
++ PE Y + + D+++ GV+ Y L+S
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 28/201 (13%)
Query: 498 IGQGGFGAV---FYAELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIG 549
+G G +G+V + A LR +K A+KK+ + ++ EL++L H+ H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 86
Query: 550 YCVEGS-------LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
+ ++LV + +LN ++ L+ + RGL+YIH
Sbjct: 87 VFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIHSA 142
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-QY 661
+ IHRD+KP+N+ ++++ ++ DFGLA+ + T V T Y PE +
Sbjct: 143 GI---IHRDLKPSNVAVNEDCELRILDFGLARQAD----EEMTGYVATRWYRAPEIMLNW 195
Query: 662 GEVSPKIDVYAFGVVLYELIS 682
+ +D+++ G ++ EL+
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQ 216
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK------EFLAELKV 535
K + + +G ++G G F V + E AA IKK +AS+ E E+ +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 536 LTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
L V H N++ L Y + L+ E + G L L + K++L+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILD 126
Query: 595 GLEYIHEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGT 650
G+ Y+H + H D+KP NI L+DKN K+ DFGLA E G + GT
Sbjct: 127 GVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGT 181
Query: 651 FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
++ PE Y + + D+++ GV+ Y L+S
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEK-----AAIKKMDMQASKEFLAELKVLTHVHHLNLVR 546
+++ N IG+G +G V A +G + I K ++ F E++++ + H N++R
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L + + ++LV E G L + R K S +I D + Y H+ V
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAYCHKLNV- 127
Query: 606 VYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG 662
HRD+KP N L + K+ DFGLA + G + T+ VGT Y+ P+ + G
Sbjct: 128 --AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTK-VGTPYYVSPQVLE-G 182
Query: 663 EVSPKIDVYAFGVVLYELI 681
P+ D ++ GV++Y L+
Sbjct: 183 LYGPECDEWSAGVMMYVLL 201
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK------EFLAELKV 535
K + + +G ++G G F V + E AA IKK +AS+ E E+ +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 536 LTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
L V H N++ L Y + L+ E + G L L + K++L+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILD 126
Query: 595 GLEYIHEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGT 650
G+ Y+H + H D+KP NI L+DKN K+ DFGLA E G + GT
Sbjct: 127 GVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGT 181
Query: 651 FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
++ PE Y + + D+++ GV+ Y L+S
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 120/292 (41%), Gaps = 44/292 (15%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEKAAI--------KKMDMQASKEFLAELKVLTHV--HH 541
+S+ +IG GG VF ++ EK I ++ D Q + E+ L + H
Sbjct: 30 YSILKQIGSGGSSKVF--QVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHS 87
Query: 542 LNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
++RL Y + +Y +E GN++ + K ++ R + + IH+
Sbjct: 88 DKIIRLYDYEITDQY--IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLA-KLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H + +H D+KPAN LI K+ DFG+A ++ V VGT YMPPE +
Sbjct: 146 HGI---VHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIK 201
Query: 661 YGEVSPK-----------IDVYAFGVVLYEL-------------ISAMEAVVKTNETITE 696
S + DV++ G +LY + IS + A++ N I
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261
Query: 697 STGLVALFEEVLRQPDPREDLQRLVDPR-LGDDYPIDSVRKMARLARACTQE 747
++VL+ R+ QR+ P L Y + ++A+ T+E
Sbjct: 262 PDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEE 313
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEK-----AAIKKMDMQASKEFLAELKVLTHVHHLNLVR 546
+++ N IG+G +G V A +G + I K ++ F E++++ + H N++R
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 547 LIGYCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605
L + + ++LV E G L + R K S +I D + Y H+ V
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDVLSAVAYCHKLNV- 144
Query: 606 VYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG 662
HRD+KP N L + K+ DFGLA + G + T+ VGT Y+ P+ + G
Sbjct: 145 --AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTK-VGTPYYVSPQVLE-G 199
Query: 663 EVSPKIDVYAFGVVLYELI 681
P+ D ++ GV++Y L+
Sbjct: 200 LYGPECDEWSAGVMMYVLL 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK------EFLAELKV 535
K + + +G ++G G F V + E AA IKK +AS+ E E+ +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 536 LTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
L V H N++ L Y + L+ E + G L L + K++L+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILD 126
Query: 595 GLEYIHEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGT 650
G+ Y+H + H D+KP NI L+DKN K+ DFGLA E G + GT
Sbjct: 127 GVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGT 181
Query: 651 FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
++ PE Y + + D+++ GV+ Y L+S
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 115/259 (44%), Gaps = 45/259 (17%)
Query: 474 VDKSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR-----GEKAAIKKMDMQASK- 527
V K +E YE + + +N F + +KIG+G F +V+ A + EK A+K + +
Sbjct: 5 VKKDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPI 64
Query: 528 EFLAELKVLTHVHHLNLVRLIGYCVEGS--LFLVYEYIENGNLNQHLRGSGKDTLTWSAR 585
AEL+ LT + V + YC + + + Y+E+ + L ++L++
Sbjct: 65 RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSFQEV 119
Query: 586 MQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA-KVADFGLAKLTE------- 637
+ L+ + L+ IH+ + +HRD+KP+N L ++ + + DFGLA+ T
Sbjct: 120 REYMLNLFKALKRIHQFGI---VHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELL 176
Query: 638 --VGSASVHTRL------------------VGTFGYMPPE-YAQYGEVSPKIDVYAFGVV 676
V S + R GT G+ PE + + ID+++ GV+
Sbjct: 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVI 236
Query: 677 LYELISAMEAVVKTNETIT 695
L+S K ++ +T
Sbjct: 237 FLSLLSGRYPFYKASDDLT 255
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQHL---SNDHICY-----FLYQILRGLKYIHS 146
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 147 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 23/213 (10%)
Query: 487 KATNDFSMGNKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK------EFLAELKV 535
K + + +G ++G G F V + E AA IKK +AS+ E E+ +
Sbjct: 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSI 68
Query: 536 LTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR 594
L V H N++ L Y + L+ E + G L L + K++L+
Sbjct: 69 LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFIKQILD 126
Query: 595 GLEYIHEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGT 650
G+ Y+H + H D+KP NI L+DKN K+ DFGLA E G + GT
Sbjct: 127 GVNYLHTKKIA---HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE--FKNIFGT 181
Query: 651 FGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
++ PE Y + + D+++ GV+ Y L+S
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 146
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 147 ANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 147
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 148 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 148
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 149 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 139
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 140 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 146
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 147 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 498 IGQGGFGAV---FYAELRGEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIG 549
+G G +G+V + A LR +K A+KK+ + ++ EL++L H+ H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLD 94
Query: 550 YCVEGS-------LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
+ ++LV + +LN ++ L+ + RGL+YIH
Sbjct: 95 VFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQA---LSDEHVQFLVYQLLRGLKYIHSA 150
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA-QY 661
+ IHRD+KP+N+ ++++ ++ DFGLA+ + T V T Y PE +
Sbjct: 151 GI---IHRDLKPSNVAVNEDSELRILDFGLARQAD----EEMTGYVATRWYRAPEIMLNW 203
Query: 662 GEVSPKIDVYAFGVVLYELISA 683
+ +D+++ G ++ EL+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQG 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 140
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 141 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 140
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 141 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG--EKAAIK-----KMDMQASKE------FLAELKVL 536
+++ M +G G G V A R +K AIK K + +++E E+++L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 537 THVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSAR 594
++H ++++ + ++V E +E G L + G+ K+ Q+ L
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL---- 124
Query: 595 GLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
++Y+HE+ + IHRD+KP N+L+ +++ K+ DFG +K+ +G S+ L GT
Sbjct: 125 AVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTP 179
Query: 652 GYMPPEY------AQYGEVSPKIDVYAFGVVLYELISA 683
Y+ PE A Y +D ++ GV+L+ +S
Sbjct: 180 TYLAPEVLVSVGTAGYNRA---VDCWSLGVILFICLSG 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG--EKAAIK-----KMDMQASKE------FLAELKVL 536
+++ M +G G G V A R +K AIK K + +++E E+++L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 537 THVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSAR 594
++H ++++ + ++V E +E G L + G+ K+ Q+ L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL---- 125
Query: 595 GLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
++Y+HE+ + IHRD+KP N+L+ +++ K+ DFG +K+ +G S+ L GT
Sbjct: 126 AVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTP 180
Query: 652 GYMPPEY------AQYGEVSPKIDVYAFGVVLYELISA 683
Y+ PE A Y +D ++ GV+L+ +S
Sbjct: 181 TYLAPEVLVSVGTAGYNRA---VDCWSLGVILFICLSG 215
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG--EKAAIK-----KMDMQASKE------FLAELKVL 536
+++ M +G G G V A R +K AIK K + +++E E+++L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 537 THVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSAR 594
++H ++++ + ++V E +E G L + G+ K+ Q+ L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL---- 125
Query: 595 GLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
++Y+HE+ + IHRD+KP N+L+ +++ K+ DFG +K+ +G S+ L GT
Sbjct: 126 AVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTP 180
Query: 652 GYMPPEY------AQYGEVSPKIDVYAFGVVLYELISA 683
Y+ PE A Y +D ++ GV+L+ +S
Sbjct: 181 TYLAPEVLVSVGTAGYNRA---VDCWSLGVILFICLSG 215
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG--EKAAIK-----KMDMQASKE------FLAELKVL 536
+++ M +G G G V A R +K AIK K + +++E E+++L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 537 THVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSAR 594
++H ++++ + ++V E +E G L + G+ K+ Q+ L
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL---- 125
Query: 595 GLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
++Y+HE+ + IHRD+KP N+L+ +++ K+ DFG +K+ +G S+ L GT
Sbjct: 126 AVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTP 180
Query: 652 GYMPPEY------AQYGEVSPKIDVYAFGVVLYELISA 683
Y+ PE A Y +D ++ GV+L+ +S
Sbjct: 181 TYLAPEVLVSVGTAGYNRA---VDCWSLGVILFICLSG 215
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 146
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 147 ANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 23/208 (11%)
Query: 492 FSMGNKIGQGGFGAVFYAE-----LRGEKAAIKKMDMQASKEFLA------ELKVLTHVH 540
+ G ++G G F V L+ IKK ++S+ ++ E+ +L +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 541 HLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
H N++ L Y + + L+ E + G L L + K++LT + G+ Y+
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLKQILNGVYYL 130
Query: 600 HEHTVPVYIHRDIKPANI-LIDKNF---RAKVADFGLAKLTEVGSASVHTRLVGTFGYMP 655
H + H D+KP NI L+D+N R K+ DFGLA + G+ + GT ++
Sbjct: 131 HSLQIA---HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIFGTPEFVA 185
Query: 656 PEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE Y + + D+++ GV+ Y L+S
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG--EKAAIK-----KMDMQASKE------FLAELKVL 536
+++ M +G G G V A R +K AIK K + +++E E+++L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 537 THVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSAR 594
++H ++++ + ++V E +E G L + G+ K+ Q+ L
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL---- 131
Query: 595 GLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
++Y+HE+ + IHRD+KP N+L+ +++ K+ DFG +K+ +G S+ L GT
Sbjct: 132 AVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTP 186
Query: 652 GYMPPEY------AQYGEVSPKIDVYAFGVVLYELISA 683
Y+ PE A Y +D ++ GV+L+ +S
Sbjct: 187 TYLAPEVLVSVGTAGYNRA---VDCWSLGVILFICLSG 221
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 19/199 (9%)
Query: 496 NKIGQGGFGAVFYAELRG---EKAA--IKKMDMQASK--EFLAELKVLTHVHHLNLVRLI 548
K+G G +G V + E+A I+K + S + L E+ VL + H N+++L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLY 102
Query: 549 GYCVEG-SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
+ + + +LV E + G L + K +A I G+ Y+H+H +
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV--IIKQVLSGVTYLHKHNI--- 157
Query: 608 IHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV 664
+HRD+KP N+L+ +K+ K+ DFGL+ + E + RL GT Y+ PE + +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERL-GTAYYIAPEVLR-KKY 214
Query: 665 SPKIDVYAFGVVLYELISA 683
K DV++ GV+L+ L++
Sbjct: 215 DEKCDVWSIGVILFILLAG 233
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKE----FLAELKVLTHVHHLN 543
ND ++G G G V+ R G A+K+M +KE L +L V+ H
Sbjct: 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 544 -LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
+V+ G + +F+ E + R G +M +A+ + L Y+ E
Sbjct: 85 YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAI--VKALYYLKE 142
Query: 602 -HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
H V IHRD+KP+NIL+D+ + K+ DFG++ + R G YM PE
Sbjct: 143 KHGV---IHRDVKPSNILLDERGQIKLCDFGIS--GRLVDDKAKDRSAGCAAYMAPERID 197
Query: 661 YGEVSP-----KIDVYAFGVVLYELISA 683
+ + + DV++ G+ L EL +
Sbjct: 198 PPDPTKPDYDIRADVWSLGISLVELATG 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG--EKAAIK-----KMDMQASKE------FLAELKVL 536
+++ M +G G G V A R +K AI+ K + +++E E+++L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 537 THVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSAR 594
++H ++++ + ++V E +E G L + G+ K+ Q+ L
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL---- 250
Query: 595 GLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
++Y+HE+ + IHRD+KP N+L+ +++ K+ DFG +K+ +G S+ L GT
Sbjct: 251 AVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTP 305
Query: 652 GYMPPEY------AQYGEVSPKIDVYAFGVVLYELISA 683
Y+ PE A Y +D ++ GV+L+ +S
Sbjct: 306 TYLAPEVLVSVGTAGYNRA---VDCWSLGVILFICLSG 340
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 36/218 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG--EKAAIK-----KMDMQASKE------FLAELKVL 536
+++ M +G G G V A R +K AI+ K + +++E E+++L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 537 THVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSAR 594
++H ++++ + ++V E +E G L + G+ K+ Q+ L
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL---- 264
Query: 595 GLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTF 651
++Y+HE+ + IHRD+KP N+L+ +++ K+ DFG +K+ +G S+ L GT
Sbjct: 265 AVQYLHENGI---IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRTLCGTP 319
Query: 652 GYMPPEY------AQYGEVSPKIDVYAFGVVLYELISA 683
Y+ PE A Y +D ++ GV+L+ +S
Sbjct: 320 TYLAPEVLVSVGTAGYNRA---VDCWSLGVILFICLSG 354
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AI+K+ + + L E+K+L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 146
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 147 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 498 IGQGGFGAVF------YAELRGEKAAIKKMDMQASKEFLAELKVLTH--VHHLNLVRLIG 549
+G+GGF F E+ K K + ++ + +++ H + H ++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 550 YCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSAR---MQIALDSARGLEYIHEHTVP 605
+ + +F+V E +L + L K AR QI L G +Y+H + V
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNRV- 142
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
IHRD+K N+ ++++ K+ DFGLA E T L GT Y+ PE S
Sbjct: 143 --IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 199
Query: 666 PKIDVYAFGVVLYELI 681
++DV++ G ++Y L+
Sbjct: 200 FEVDVWSIGCIMYTLL 215
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 142
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 143 ANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 142
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 143 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 498 IGQGGFGAVF------YAELRGEKAAIKKMDMQASKEFLAELKVLTH--VHHLNLVRLIG 549
+G+GGF F E+ K K + ++ + +++ H + H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 550 YCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSAR---MQIALDSARGLEYIHEHTVP 605
+ + +F+V E +L + L K AR QI L G +Y+H + V
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNRV- 138
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
IHRD+K N+ ++++ K+ DFGLA E T L GT Y+ PE S
Sbjct: 139 --IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 666 PKIDVYAFGVVLYELI 681
++DV++ G ++Y L+
Sbjct: 196 FEVDVWSIGCIMYTLL 211
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 21/196 (10%)
Query: 498 IGQGGFGAVF------YAELRGEKAAIKKMDMQASKEFLAELKVLTH--VHHLNLVRLIG 549
+G+GGF F E+ K K + ++ + +++ H + H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 550 YCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSAR---MQIALDSARGLEYIHEHTVP 605
+ + +F+V E +L + L K AR QI L G +Y+H + V
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNRV- 138
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
IHRD+K N+ ++++ K+ DFGLA E T L GT Y+ PE S
Sbjct: 139 --IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHS 195
Query: 666 PKIDVYAFGVVLYELI 681
++DV++ G ++Y L+
Sbjct: 196 FEVDVWSIGCIMYTLL 211
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 488 ATNDFSMGNKIGQGGFGAVFYAELRGEK-------AAIKKMDMQAS----KEFLAELKVL 536
A +G +G+G FG V A G K A+K + A+ K + ELK+L
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKIL 84
Query: 537 THV-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLR 573
TH+ HHLN+V L+G C + G L ++ EY + GNL+ +L+
Sbjct: 85 THIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLK 124
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 577 KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636
K+ +T + + ARG+E++ IHRD+ NIL+ +N K+ DFGLA+
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKC---IHRDLAARNILLSENNVVKICDFGLARDI 249
Query: 637 EVGSASVH---TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
V TRL +M PE S K DV+++GV+L+E+ S
Sbjct: 250 YKNPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 142
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 143 ANV---LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 498 IGQGGFGAVFYAEL-RGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV---- 552
IG G FG VF A+L ++ AIKK+ +Q + EL+++ V H N+V L +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKV-LQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGD 106
Query: 553 ---EGSLFLVYEYIENG--NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVY 607
E L LV EY+ ++H K T+ R L YIH +
Sbjct: 107 KKDEVFLNLVLEYVPETVYRASRHY-AKLKQTMPMLLIKLYMYQLLRSLAYIHSIGI--- 162
Query: 608 IHRDIKPANILID-KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV-- 664
HRDIKP N+L+D + K+ DFG AK+ G +V + + Y PE +G
Sbjct: 163 CHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX--ICSRYYRAPELI-FGATNY 219
Query: 665 SPKIDVYAFGVVLYELISA 683
+ ID+++ G V+ EL+
Sbjct: 220 TTNIDIWSTGCVMAELMQG 238
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 144
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 145 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 150
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 151 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 142
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 143 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 46/240 (19%)
Query: 486 AKATNDFSMGNKIGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTH 538
K +++ + + IG+G +G V+ Y + + AIKK+ D+ K L E+ +L
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 539 VHHLNLVRLIGYCVE------GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDS 592
+ ++RL + L++V E I + +L + + LT I +
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPI--FLTEQHVKTILYNL 140
Query: 593 ARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-------- 644
G ++IHE + IHRD+KPAN L++++ K+ DFGLA+ T +H
Sbjct: 141 LLGEKFIHESGI---IHRDLKPANCLLNQDCSVKICDFGLAR-TINSDKDIHIVNDLEEK 196
Query: 645 -----------------TRLVGTFGYMPPEYAQYGE-VSPKIDVYAFGVVLYELISAMEA 686
T V T Y PE E + ID+++ G + EL++ M++
Sbjct: 197 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 162
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 163 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 34/206 (16%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 146
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT----RLVGTFGYMPPE 657
V +HRD+KP+N+L++ K+ DFGLA++ + HT V T Y PE
Sbjct: 147 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--HTGFLXEXVATRWYRAPE 201
Query: 658 YAQYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 202 IMLNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 34/206 (16%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y L + AIKK+ + + L E+K+L H N++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 147
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT----RLVGTFGYMPPE 657
V +HRD+KP+N+L++ K+ DFGLA++ + HT V T Y PE
Sbjct: 148 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--HTGFLXEXVATRWYRAPE 202
Query: 658 YAQYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 203 IMLNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 142
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 143 ANV---LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 24/201 (11%)
Query: 498 IGQGGFGAVFYA-----ELRGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV 552
+G+G +G V+ ++R I + D + S+ E+ + H+ H N+V+ +G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 553 EGSLFLVY-EYIENGNLNQHLR---GSGKD---TLTWSARMQIALDSARGLEYIHEHTVP 605
E ++ E + G+L+ LR G KD T+ + + + GL+Y+H++ +
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQI- 143
Query: 606 VYIHRDIKPANILIDK-NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGE- 663
+HRDIK N+LI+ + K++DFG +K G GT YM PE G
Sbjct: 144 --VHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 664 -VSPKIDVYAFGVVLYELISA 683
D+++ G + E+ +
Sbjct: 201 GYGKAADIWSLGCTIIEMATG 221
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--------ASKEFLAELKVLTHVHH 541
+ + IG+G F V R G++ A+K +D+ ++++ E + + H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 542 LNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR-----MQIALDSARG 595
++V L+ Y +G L++V+E+++ +L + +S M+ L++ R
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR- 146
Query: 596 LEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLA-KLTEVGSASVHTRLVGTF 651
Y H++ + IHRD+KP +L+ + + K+ FG+A +L E S V VGT
Sbjct: 147 --YCHDNNI---IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SGLVAGGRVGTP 199
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
+M PE + +DV+ GV+L+ L+S T E + E
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE 244
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 144
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 145 ANV---LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 106/225 (47%), Gaps = 28/225 (12%)
Query: 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--------ASKEFLAELKVLTHVHH 541
+ + IG+G F V R G++ A+K +D+ ++++ E + + H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 542 LNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSAR-----MQIALDSARG 595
++V L+ Y +G L++V+E+++ +L + +S M+ L++ R
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALR- 144
Query: 596 LEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLA-KLTEVGSASVHTRLVGTF 651
Y H++ + IHRD+KP +L+ + + K+ FG+A +L E S V VGT
Sbjct: 145 --YCHDNNI---IHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE--SGLVAGGRVGTP 197
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE 696
+M PE + +DV+ GV+L+ L+S T E + E
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFE 242
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 109/271 (40%), Gaps = 80/271 (29%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTL---TWSARMQ----- 587
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR + + T AR +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY 146
Query: 588 ---IALDSARGLEY--------------------IHEHTVPVYIHR-------------- 610
I +D R L+ + E P +++
Sbjct: 147 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ 206
Query: 611 ----------------DIKPANILIDKNFRAKVADFGLAKLTEVGSASVH---TRLVGTF 651
D+ NIL+ + K+ DFGLA+ V RL
Sbjct: 207 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--PL 264
Query: 652 GYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+M PE + + DV++FGV+L+E+ S
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 88/275 (32%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 20 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 79
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTL---TWSARMQ----- 587
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR + + T AR +
Sbjct: 80 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY 139
Query: 588 ---IALDSARGLEY--------------------IHEHTVPVYIHRD------------- 611
I +D R L+ + E P +++D
Sbjct: 140 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ 199
Query: 612 -----------------IKPANILIDKNFRAKVADFGLAK-------LTEVGSASVHTRL 647
+ NIL+ + K+ DFGLA+ G A + +
Sbjct: 200 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK- 258
Query: 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+M PE + + DV++FGV+L+E+ S
Sbjct: 259 -----WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 88/275 (32%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTL---TWSARMQ----- 587
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR + + T AR +
Sbjct: 82 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY 141
Query: 588 ---IALDSARGLEY--------------------IHEHTVPVYIHRD------------- 611
I +D R L+ + E P +++D
Sbjct: 142 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ 201
Query: 612 -----------------IKPANILIDKNFRAKVADFGLAK-------LTEVGSASVHTRL 647
+ NIL+ + K+ DFGLA+ G A + +
Sbjct: 202 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK- 260
Query: 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+M PE + + DV++FGV+L+E+ S
Sbjct: 261 -----WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 110/275 (40%), Gaps = 88/275 (32%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQAS----KEFLAELKVLTH 538
+ +G +G+G FG V A+ G A+K + A+ + ++ELK+L H
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 539 V-HHLNLVRLIGYCVE--GSLFLVYEYIENGNLNQHLRGSGKDTL---TWSARMQ----- 587
+ HHLN+V L+G C + G L ++ E+ + GNL+ +LR + + T AR +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDY 148
Query: 588 ---IALDSARGLEY--------------------IHEHTVPVYIHRD------------- 611
I +D R L+ + E P +++D
Sbjct: 149 VGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQ 208
Query: 612 -----------------IKPANILIDKNFRAKVADFGLAK-------LTEVGSASVHTRL 647
+ NIL+ + K+ DFGLA+ G A + +
Sbjct: 209 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK- 267
Query: 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
+M PE + + DV++FGV+L+E+ S
Sbjct: 268 -----WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 94/201 (46%), Gaps = 24/201 (11%)
Query: 498 IGQGGFGAVFYA-----ELRGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV 552
+G+G +G V+ ++R I + D + S+ E+ + H+ H N+V+ +G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 553 EGSLFLVY-EYIENGNLNQHLR---GSGKD---TLTWSARMQIALDSARGLEYIHEHTVP 605
E ++ E + G+L+ LR G KD T+ + + + GL+Y+H++ +
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL-----EGLKYLHDNQI- 129
Query: 606 VYIHRDIKPANILIDK-NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGE- 663
+HRDIK N+LI+ + K++DFG +K G GT YM PE G
Sbjct: 130 --VHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPR 186
Query: 664 -VSPKIDVYAFGVVLYELISA 683
D+++ G + E+ +
Sbjct: 187 GYGKAADIWSLGCTIIEMATG 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKEFL-AELKVLTHVHHLNL 544
+ + + ++G G FG V R G A K ++ KE + E++ ++ + H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 545 VRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
V L + + + ++YE++ G L + + + ++ ++ +GL ++HE+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 604 VPVYIHRDIKPANILI--DKNFRAKVADFGL-AKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
Y+H D+KP NI+ ++ K+ DFGL A L S V T GT + PE A+
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 329
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT 695
V D+++ GV+ Y L+S + N+ T
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 364
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 104/234 (44%), Gaps = 41/234 (17%)
Query: 490 NDFSMGNKIGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHL 542
+++ + + IG+G +G V+ Y + + AIKK+ D+ K L E+ +L +
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 543 NLVRLIGYCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGL 596
++RL + L ++V E I + +L + + LT I + G
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPI--FLTEEHIKTILYNLLLGE 142
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK-------------LTEVGSASV 643
+IHE + IHRD+KPAN L++++ KV DFGLA+ L E
Sbjct: 143 NFIHESGI---IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 644 H--------TRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISAMEAVV 688
H T V T Y PE E K ID+++ G + EL++ +++ +
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 92/206 (44%), Gaps = 32/206 (15%)
Query: 497 KIGQGGFGAVFYA---ELRGEKAAIKKMDMQASK----EFLAELKVLTHVHHLNLVRLIG 549
+IG+G F V+ E E A + D + +K F E + L + H N+VR
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 550 Y---CVEGS--LFLVYEYIENGNLNQHLR----GSGKDTLTWSARMQIALDSARGLEYIH 600
V+G + LV E +G L +L+ K +W ++ +GL+++H
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLH 146
Query: 601 EHTVPVYIHRDIKPANILID-KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEY- 658
T P+ IHRD+K NI I K+ D GLA L AS ++GT + PE
Sbjct: 147 TRTPPI-IHRDLKCDNIFITGPTGSVKIGDLGLATLK---RASFAKAVIGTPEFXAPEXY 202
Query: 659 -AQYGEVSPKIDVYAFGVVLYELISA 683
+Y E +DVYAFG E ++
Sbjct: 203 EEKYDE---SVDVYAFGXCXLEXATS 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 30/204 (14%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKMDMQASKEF----LAELKVLTHVHHLNLV------ 545
IG+G +G V Y + + AIKK+ + + L E+K+L H N++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 546 RLIGYCVEGSLFLVYEYIENGNLN----QHLRGSGKDTLTWSARMQIALDSARGLEYIHE 601
R +++V + +E QHL D + + RGL+YIH
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQHL---SNDHICY-----FLYQILRGLKYIHS 144
Query: 602 HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV--GSASVHTRLVGTFGYMPPEYA 659
V +HRD+KP+N+L++ K+ DFGLA++ + T V T Y PE
Sbjct: 145 ANV---LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 660 QYGE-VSPKIDVYAFGVVLYELIS 682
+ + ID+++ G +L E++S
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 101/230 (43%), Gaps = 21/230 (9%)
Query: 491 DFSMGNK-IGQGGFGAVFYAELRGEKAAI------KKMDMQASKEFLAELKVLTHVHHLN 543
D + +K +G+G F + A K+M+ KE A LK+ H N
Sbjct: 11 DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITA-LKLCEG--HPN 67
Query: 544 LVRLIG-YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
+V+L + + FLV E + G L + ++ + T ++ + L SA H H
Sbjct: 68 IVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVS----HMH 123
Query: 603 TVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYA 659
V V +HRD+KP N+L + N K+ DFG A+L + + T T Y PE
Sbjct: 124 DVGV-VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELL 181
Query: 660 QYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709
D+++ GV+LY ++S + ++T T V + +++ +
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKK 230
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIK--KMDMQASKEFL-AELKVLTHVHHLNL 544
+ + + ++G G FG V R G A K ++ KE + E++ ++ + H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 545 VRL-IGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT 603
V L + + + ++YE++ G L + + + ++ ++ +GL ++HE+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 604 VPVYIHRDIKPANILI--DKNFRAKVADFGL-AKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
Y+H D+KP NI+ ++ K+ DFGL A L S V T GT + PE A+
Sbjct: 170 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 223
Query: 661 YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT 695
V D+++ GV+ Y L+S + N+ T
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET 258
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 498 IGQGGFGAVF------YAELRGEKAAIKKMDMQASKEFLAELKVLTH--VHHLNLVRLIG 549
+G+GGF F E+ K K + ++ + +++ H + H ++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 550 YCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSAR---MQIALDSARGLEYIHEHTVP 605
+ + +F+V E +L + L K AR QI L G +Y+H + V
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNRV- 160
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
IHRD+K N+ ++++ K+ DFGLA E L GT Y+ PE S
Sbjct: 161 --IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHS 217
Query: 666 PKIDVYAFGVVLYELI 681
++DV++ G ++Y L+
Sbjct: 218 FEVDVWSIGCIMYTLL 233
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 498 IGQGGFGAVF------YAELRGEKAAIKKMDMQASKEFLAELKVLTH--VHHLNLVRLIG 549
+G+GGF F E+ K K + ++ + +++ H + H ++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 550 YCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSAR---MQIALDSARGLEYIHEHTVP 605
+ + +F+V E +L + L K AR QI L G +Y+H + V
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNRV- 162
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
IHRD+K N+ ++++ K+ DFGLA E L GT Y+ PE S
Sbjct: 163 --IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHS 219
Query: 666 PKIDVYAFGVVLYELI 681
++DV++ G ++Y L+
Sbjct: 220 FEVDVWSIGCIMYTLL 235
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL+Q +Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLSQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 VGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ GV++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 35/196 (17%)
Query: 499 GQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVH-HLNLVRLIG-YCVEGSL 556
G G F A ELR +A +K++D +L V H N+++L Y
Sbjct: 41 GGGSFSAEEVQELR--EATLKEVD------------ILRKVSGHPNIIQLKDTYETNTFF 86
Query: 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPAN 616
FLV++ ++ G L +L + K TL+ +I + +H+ + +HRD+KP N
Sbjct: 87 FLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICALHKLNI---VHRDLKPEN 141
Query: 617 ILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ---------YGEVSPK 667
IL+D + K+ DFG + + G + GT Y+ PE + YG+ +
Sbjct: 142 ILLDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAPEIIECSMNDNHPGYGK---E 196
Query: 668 IDVYAFGVVLYELISA 683
+D+++ GV++Y L++
Sbjct: 197 VDMWSTGVIMYTLLAG 212
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 21/196 (10%)
Query: 498 IGQGGFGAVF------YAELRGEKAAIKKMDMQASKEFLAELKVLTH--VHHLNLVRLIG 549
+G+GGF F E+ K K + ++ + +++ H + H ++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 550 YCVEGS-LFLVYEYIENGNLNQHLRGSGKDTLTWSAR---MQIALDSARGLEYIHEHTVP 605
+ + +F+V E +L + L K AR QI L G +Y+H + V
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL----GCQYLHRNRV- 136
Query: 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
IHRD+K N+ ++++ K+ DFGLA E L GT Y+ PE S
Sbjct: 137 --IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHS 193
Query: 666 PKIDVYAFGVVLYELI 681
++DV++ G ++Y L+
Sbjct: 194 FEVDVWSIGCIMYTLL 209
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 52/240 (21%)
Query: 492 FSMGNKIGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNL 544
+ + + IG G +G V Y +L AIKK+ D+ K L E+ +L ++H ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 545 VRLIGYCVE------GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIAL---DSARG 595
V+++ + L++V E I + + + R T + + I + G
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFR-----TPVYLTELHIKTLLYNLLVG 168
Query: 596 LEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT---EVGSASV--------- 643
++Y+H + +HRD+KPAN L++++ KV DFGLA+ E G++ +
Sbjct: 169 VKYVHSAGI---LHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 644 ------HTR-----LVG---TFGYMPPEYAQYGE-VSPKIDVYAFGVVLYELISAMEAVV 688
HT+ L G T Y PE E + IDV++ G + EL++ ++ V
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 109/267 (40%), Gaps = 45/267 (16%)
Query: 489 TNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----------FLAELKV 535
+ +S + +G G FG V+ A + + ++ +K + + E E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 536 LTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG 595
L+ V H N+++++ F L GSG D + R LD
Sbjct: 83 LSRVEHANIIKVLDIFENQGFF---------QLVMEKHGSGLDLFAFIDR-HPRLDEPLA 132
Query: 596 LEYIHEHTVPVY--------IHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL 647
YI V IHRDIK NI+I ++F K+ DFG A E G +
Sbjct: 133 -SYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG--KLFYTF 189
Query: 648 VGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITE--------ST 698
GT Y PE P++++++ GV LY L+ + ET+ S
Sbjct: 190 CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSK 249
Query: 699 GLVALFEEVLRQ-PDPREDLQRLV-DP 723
L++L +L+ P+ R L++LV DP
Sbjct: 250 ELMSLVSGLLQPVPERRTTLEKLVTDP 276
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 532 ELKVLTHVHHLNLVRLI-GYCVEGSLFLVYEYIENGNLNQHLRGSGKD-TLTWSARMQIA 589
E+ ++ +HH L+ L + + + L+ E++ G L R + +D ++ + +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFD--RIAAEDYKMSEAEVINYM 155
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILID--KNFRAKVADFGLAKLTEVGSASVHTRL 647
+ GL+++HEH++ +H DIKP NI+ + K K+ DFGLA T++ +
Sbjct: 156 RQACEGLKHMHEHSI---VHLDIKPENIMCETKKASSVKIIDFGLA--TKLNPDEIVKVT 210
Query: 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAM 684
T + PE V D++A GV+ Y L+S +
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 247
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 35/196 (17%)
Query: 499 GQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVH-HLNLVRLIG-YCVEGSL 556
G G F A ELR +A +K++D +L V H N+++L Y
Sbjct: 54 GGGSFSAEEVQELR--EATLKEVD------------ILRKVSGHPNIIQLKDTYETNTFF 99
Query: 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPAN 616
FLV++ ++ G L +L + K TL+ +I + +H+ + +HRD+KP N
Sbjct: 100 FLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICALHKLNI---VHRDLKPEN 154
Query: 617 ILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ---------YGEVSPK 667
IL+D + K+ DFG + + G + GT Y+ PE + YG+ +
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKL--REVCGTPSYLAPEIIECSMNDNHPGYGK---E 209
Query: 668 IDVYAFGVVLYELISA 683
+D+++ GV++Y L++
Sbjct: 210 VDMWSTGVIMYTLLAG 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAV--FYAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL+Q + Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLSQVI--------------QMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 VGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ GV++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 35/196 (17%)
Query: 499 GQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVH-HLNLVRLIG-YCVEGSL 556
G G F A ELR +A +K++D +L V H N+++L Y
Sbjct: 54 GGGSFSAEEVQELR--EATLKEVD------------ILRKVSGHPNIIQLKDTYETNTFF 99
Query: 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPAN 616
FLV++ ++ G L +L + K TL+ +I + +H+ + +HRD+KP N
Sbjct: 100 FLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICALHKLNI---VHRDLKPEN 154
Query: 617 ILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ---------YGEVSPK 667
IL+D + K+ DFG + + G + GT Y+ PE + YG+ +
Sbjct: 155 ILLDDDMNIKLTDFGFSCQLDPGEKL--RSVCGTPSYLAPEIIECSMNDNHPGYGK---E 209
Query: 668 IDVYAFGVVLYELISA 683
+D+++ GV++Y L++
Sbjct: 210 VDMWSTGVIMYTLLAG 225
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 20/155 (12%)
Query: 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKM------DMQASKEFLAELKVLT----HV 539
+ + K+G+G +G V+ + R GE A+KK+ A + F E+ +LT H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF-REIMILTELSGHE 69
Query: 540 HHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI 599
+ +NL+ ++ + ++LV++Y+E +L+ +R + L + + + ++Y+
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRA---NILEPVHKQYVVYQLIKVIKYL 125
Query: 600 HEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634
H + +HRD+KP+NIL++ KVADFGL++
Sbjct: 126 HSGGL---LHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 489 TNDFSMGNKI-GQGGFGAVF--YAELRGEKAAIKKM------------DMQAS--KEFLA 531
T+D+ + ++ G G G V + G+K A+K + QAS +
Sbjct: 8 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVC 67
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
L V ++HH + L ++ E +E G L ++ G T +I D
Sbjct: 68 ILDVYENMHH----------GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 117
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLV 648
++++H H + HRD+KP N+L +K+ K+ DFG AK E ++ T
Sbjct: 118 IGTAIQFLHSHNI---AHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY 172
Query: 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681
+ Y+ PE + D+++ GV++Y L+
Sbjct: 173 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILL 204
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 38/215 (17%)
Query: 496 NKIGQGGFGAVFYAE--LRGEKAAIKKM---DMQASKEFLAELKVLTHVHHLNLVRLIGY 550
K+G+GGF V E G A+K++ + Q +E E + +H N++RL+ Y
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 551 CV-----EGSLFLVYEYIENGNLN---QHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602
C+ + +L+ + + G L + L+ G + LT + + L RGLE IH
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKG-NFLTEDQILWLLLGICRGLEAIH-- 151
Query: 603 TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR-------------LVG 649
Y HRD+KP NIL+ + + D G + A +H
Sbjct: 152 -AKGYAHRDLKPTNILLGDEGQPVLMDLG-----SMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 650 TFGYMPPEY---AQYGEVSPKIDVYAFGVVLYELI 681
T Y PE + + + DV++ G VLY ++
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM 240
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 36/213 (16%)
Query: 489 TNDFSMGNKI-GQGGFGAVF--YAELRGEKAAIKKM------------DMQAS--KEFLA 531
T+D+ + ++ G G G V + G+K A+K + QAS +
Sbjct: 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVC 86
Query: 532 ELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALD 591
L V ++HH + L ++ E +E G L ++ G T +I D
Sbjct: 87 ILDVYENMHH----------GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 136
Query: 592 SARGLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVHTRLV 648
++++H H + HRD+KP N+L +K+ K+ DFG AK E ++ T
Sbjct: 137 IGTAIQFLHSHNI---AHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCY 191
Query: 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681
+ Y+ PE + D+++ GV++Y L+
Sbjct: 192 TPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILL 223
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 487 KATNDFSMGNKIGQGGFGAVF------YAELRGEKAAIKKMDMQA-SKEFLA-ELKVLTH 538
+ + G +G+GGF + E+ K K M ++ KE ++ E+ +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 539 VHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQ-HLRGSGKDTLTWSARMQIALDSARGL 596
+ + ++V G+ + +++V E +L + H R + +T + +G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR---RKAVTEPEARYFMRQTIQGV 155
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
+Y+H + V IHRD+K N+ ++ + K+ DFGLA E T L GT Y+ P
Sbjct: 156 QYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAP 211
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E S ++D+++ G +LY L+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLL 236
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E ++ NL Q +Q+ LD R
Sbjct: 92 FTPQKTLEEFQDVYLVMELMD-ANLXQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E ++ NL Q +Q+ LD R
Sbjct: 130 FTPQKTLEEFQDVYLVMELMD-ANLCQ--------------VIQMELDHERMSYLLYQML 174
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 175 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 229
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAV--FYAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q +Q+ LD R
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLXQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 XGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 26/211 (12%)
Query: 495 GNKIGQGGFGAVFYAELRGEKA----AIKKMD-----MQASKEFLAELKVLTHVHHLNLV 545
G K+G+G +G V+ A+ + K A+K+++ M A +E +A L+ L H + ++L
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE-IALLRELKHPNVISLQ 84
Query: 546 RLIGYCVEGSLFLVYEYIENG--NLNQHLRGSGKDT----LTWSARMQIALDSARGLEYI 599
++ + ++L+++Y E+ ++ + R S + L + G+ Y+
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL 144
Query: 600 HEHTVPVYIHRDIKPANILI----DKNFRAKVADFGLAKL--TEVGSASVHTRLVGTFGY 653
H + V +HRD+KPANIL+ + R K+AD G A+L + + + +V TF Y
Sbjct: 145 HANWV---LHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 654 MPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
PE K ID++A G + EL+++
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL+Q + Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLSQVI--------------QMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ G ++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL+Q +Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLSQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ G ++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 25/269 (9%)
Query: 490 NDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQASKEFLAELKVLTHVHH----LN 543
+D+ + K+G+G + VF A EK +K + + E+K+L ++ +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIIT 96
Query: 544 LVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLT-WSARMQIALDSARGLEYIHEH 602
L ++ V + LV+E++ N + Q + TLT + R + + + L+Y H
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYM-YEILKALDYCHSM 150
Query: 603 TVPVYIHRDIKPANILIDKNFRA-KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY 661
+ +HRD+KP N++ID R ++ D+GLA+ G + R+ + P Y
Sbjct: 151 GI---MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-EYNVRVASRYFKGPELLVDY 206
Query: 662 GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL- 720
+D+++ G +L +I E ++ + + +VL D + + +
Sbjct: 207 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA----KVLGTEDLYDYIDKYN 262
Query: 721 --VDPRLGDDYPIDSVRKMARLARACTQE 747
+DPR D S ++ R + Q
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQH 291
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAV--FYAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL+Q +Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLSQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ G ++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E ++ NL Q +Q+ LD R
Sbjct: 92 FTPQKTLEEFQDVYLVMELMD-ANLCQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q +Q+ LD R
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLXQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 XGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E ++ NL Q +Q+ LD R
Sbjct: 130 FTPQKTLEEFQDVYLVMELMD-ANLCQ--------------VIQMELDHERMSYLLYQML 174
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 175 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 229
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAV--FYAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL+Q + Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLSQVI--------------QMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 VGIKHLHSAGI---IHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ G ++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q +Q+ LD R
Sbjct: 85 FTPQKTLEEFQDVYLVMELM-DANLXQ--------------VIQMELDHERMSYLLYQML 129
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 130 XGIKHLHSAGI---IHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRYY 184
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q + Q+ LD R
Sbjct: 93 FTPQKTLEEFQDVYLVMELM-DANLCQVI--------------QMELDHERMSYLLYQML 137
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 138 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 192
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q +Q+ LD R
Sbjct: 91 FTPQKTLEEFQDVYLVMELM-DANLCQ--------------VIQMELDHERMSYLLYQML 135
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 136 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 190
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q +Q+ LD R
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q +Q+ LD R
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q + Q+ LD R
Sbjct: 93 FTPQKTLEEFQDVYLVMELM-DANLCQVI--------------QMELDHERMSYLLYQML 137
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 138 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 192
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL Q + Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLCQVI--------------QMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ G ++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL Q + Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLCQVI--------------QMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ G ++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 487 KATNDFSMGNKIGQGGFGAVF------YAELRGEKAAIKKMDMQA-SKEFLA-ELKVLTH 538
+ + G +G+GGF + E+ K K M ++ KE ++ E+ +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 539 VHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQ-HLRGSGKDTLTWSARMQIALDSARGL 596
+ + ++V G+ + +++V E +L + H R + +T + +G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR---RKAVTEPEARYFMRQTIQGV 155
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
+Y+H + V IHRD+K N+ ++ + K+ DFGLA E L GT Y+ P
Sbjct: 156 QYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKXLCGTPNYIAP 211
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E S ++D+++ G +LY L+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLL 236
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q +Q+ LD R
Sbjct: 86 FTPQKTLEEFQDVYLVMELM-DANLCQ--------------VIQMELDHERMSYLLYQML 130
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 131 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 185
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL Q +Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLCQ--------------VIQMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ G ++ E+I
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 19/223 (8%)
Query: 474 VDKSVEFSYEELAKATNDFSM--GNKIGQGGFGAV--FYAELRGEKAAIK-----KMDMQ 524
VD E Y + + N+F + ++G+G F V ++ G++ A K +
Sbjct: 11 VDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD 70
Query: 525 ASKEFLAELKVLTHVHHLNLVRLIGYCVEGS--LFLVYEYIENGNLNQHLRGSGKDTLTW 582
E L E+ VL V + E + + L+ EY G + + ++
Sbjct: 71 CRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSE 130
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF---RAKVADFGLAKLTEVG 639
+ +++ G+ Y+H++ + +H D+KP NIL+ + K+ DFG+++ ++G
Sbjct: 131 NDVIRLIKQILEGVYYLHQNNI---VHLDLKPQNILLSSIYPLGDIKIVDFGMSR--KIG 185
Query: 640 SASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682
A ++GT Y+ PE Y ++ D++ G++ Y L++
Sbjct: 186 HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q +Q+ LD R
Sbjct: 85 FTPQKTLEEFQDVYLVMELM-DANLCQ--------------VIQMELDHERMSYLLYQML 129
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 130 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 184
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + +L +LV E + + NL Q +Q+ LD R
Sbjct: 86 FTPQKTLEEFQDVYLVMELM-DANLCQ--------------VIQMELDHERMSYLLYQML 130
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 131 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 185
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL Q + Q+ LD R
Sbjct: 93 FTPQKSLEEFQDVYIVMELM-DANLCQVI--------------QMELDHERMSYLLYQML 137
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 138 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 192
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ G ++ E+I
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 487 KATNDFSMGNKIGQGGFGAVF------YAELRGEKAAIKKMDMQA-SKEFLA-ELKVLTH 538
+ + G +G+GGF + E+ K K M ++ KE ++ E+ +
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 539 VHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQ-HLRGSGKDTLTWSARMQIALDSARGL 596
+ + ++V G+ + +++V E +L + H R + +T + +G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR---RKAVTEPEARYFMRQTIQGV 155
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
+Y+H + V IHRD+K N+ ++ + K+ DFGLA E L GT Y+ P
Sbjct: 156 QYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAP 211
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E S ++D+++ G +LY L+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLL 236
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 487 KATNDFSMGNKIGQGGFGAVF------YAELRGEKAAIKKMDMQA-SKEFLA-ELKVLTH 538
+ + G +G+GGF + E+ K K M ++ KE ++ E+ +
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 539 VHHLNLVRLIGYCVEGS-LFLVYEYIENGNLNQ-HLRGSGKDTLTWSARMQIALDSARGL 596
+ + ++V G+ + +++V E +L + H R + +T + +G+
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKR---RKAVTEPEARYFMRQTIQGV 139
Query: 597 EYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656
+Y+H + V IHRD+K N+ ++ + K+ DFGLA E L GT Y+ P
Sbjct: 140 QYLHNNRV---IHRDLKLGNLFLNDDMDVKIGDFGLATKIEF-DGERKKDLCGTPNYIAP 195
Query: 657 EYAQYGEVSPKIDVYAFGVVLYELI 681
E S ++D+++ G +LY L+
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLL 220
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 91/214 (42%), Gaps = 19/214 (8%)
Query: 486 AKATNDFSMGNKIGQGGFGAV---FYAELRGEKAAIKKMDM------QASKEFLAELKVL 536
AK + MG+ +G+G +G V +E +A E+++L
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLL 60
Query: 537 THVHHLNLVRLIGYCV---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSA 593
+ H N+++L+ + +++V EY G + + L +
Sbjct: 61 RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 594 RGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV-GTFG 652
GLEY+H + +H+DIKP N+L+ K++ G+A+ +A R G+
Sbjct: 120 DGLEYLHSQGI---VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPA 176
Query: 653 YMPPEYAQYGEVSP--KIDVYAFGVVLYELISAM 684
+ PPE A + K+D+++ GV LY + + +
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGL 210
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 31/228 (13%)
Query: 477 SVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAE--LRGEKAAIKKMDMQAS---KEFLA 531
S+ +E++ K T++ +G+G + V A G++ A+K ++ QA
Sbjct: 5 SLPGKFEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFR 59
Query: 532 ELKVLTHVH-HLNLVRLIGYCVEGSLF-LVYEYIENGNLNQHLRGSGKDTLTWSARMQIA 589
E++ L + N++ LI + + + F LV+E ++ G++ H++ ++R +
Sbjct: 60 EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR--VV 117
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILI---DKNFRAKVADFGLAKLTEVGSASVH-- 644
D A L+++H + HRD+KP NIL +K K+ DF L ++ ++
Sbjct: 118 RDVAAALDFLHTKGIA---HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPIT 174
Query: 645 ----TRLVGTFGYMPPEYA-----QYGEVSPKIDVYAFGVVLYELISA 683
T G+ YM PE Q + D+++ GVVLY ++S
Sbjct: 175 TPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 44/210 (20%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL Q + Q+ LD R
Sbjct: 94 FTPQKSLEEFQDVYIVMELM-DANLCQVI--------------QMELDHERMSYLLYQML 138
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + V T Y
Sbjct: 139 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRYY 193
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELISA 683
PE +D+++ G ++ E+I
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL Q + Q+ LD R
Sbjct: 97 FTPQKSLEEFQDVYIVMELM-DANLCQVI--------------QMELDHERMSYLLYQML 141
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 142 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 196
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 99/219 (45%), Gaps = 21/219 (9%)
Query: 477 SVEFSYEELAKATNDFSMGNKIGQGGFGAVFYA--ELRGEKAAIKKMDMQASKE-----F 529
S+ S A + + + K+G+G +G V+ A + E AIK++ ++ +E
Sbjct: 21 SMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA 80
Query: 530 LAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588
+ E+ +L + H N++ L L L++EY EN +L +++ + ++
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLY 139
Query: 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA-----KVADFGLAKLTEVGSASV 643
L G+ + H +HRD+KP N+L+ + + K+ DFGLA+ +
Sbjct: 140 QL--INGVNFCHSRRC---LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF 194
Query: 644 HTRLVGTFGYMPPE-YAQYGEVSPKIDVYAFGVVLYELI 681
T + T Y PPE S +D+++ + E++
Sbjct: 195 -THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL Q +Q+ LD R
Sbjct: 86 FTPQKSLEEFQDVYIVMELM-DANLCQ--------------VIQMELDHERMSYLLYQML 130
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + T V T Y
Sbjct: 131 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYY 185
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 115/286 (40%), Gaps = 65/286 (22%)
Query: 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYA---ELRGEKA-------AIKKMDMQASKEF 529
F L + + + IGQG +G V A + R +A I++++ + +
Sbjct: 16 FQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERI 75
Query: 530 LAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIENGNLNQHLR-----GSGK------ 577
E++++ +HH N+ RL Y E + LV E G+L L +GK
Sbjct: 76 KTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135
Query: 578 -----------------------DTLTWSARMQIALDSAR----GLEYIHEHTVPVYIHR 610
++L + R ++ + R L Y+H + HR
Sbjct: 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGI---CHR 192
Query: 611 DIKPANILI--DKNFRAKVADFGLAK---LTEVGSASVHTRLVGTFGYMPPEYAQYGEVS 665
DIKP N L +K+F K+ DFGL+K G T GT ++ PE S
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252
Query: 666 --PKIDVYAFGVVLYELISAMEAV----VKTNETITESTGLVALFE 705
PK D ++ GV+L+ L+ M AV V +TI++ FE
Sbjct: 253 YGPKCDAWSAGVLLHLLL--MGAVPFPGVNDADTISQVLNKKLCFE 296
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 97/214 (45%), Gaps = 38/214 (17%)
Query: 492 FSMGNKIGQGGFGAVFYAELRGEK-AAIKKMDMQASKEFLAELKVLTHV-HHLNLVRLIG 549
F + +G G G + Y + + A+K++ + E+++L H N++R
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRY-- 83
Query: 550 YCVEGSLFLVY-----------EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598
+C E Y EY+E + HL G + +T + + GL +
Sbjct: 84 FCTEKDRQFQYIAIELCAATLQEYVEQKDF-AHL---GLEPIT------LLQQTTSGLAH 133
Query: 599 IHEHTVPVYIHRDIKPANILIDK-----NFRAKVADFGLAKLTEVGSASVHTR--LVGTF 651
+H + +HRD+KP NILI +A ++DFGL K VG S R + GT
Sbjct: 134 LHSLNI---VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 652 GYMPPEY-AQYGEVSP--KIDVYAFGVVLYELIS 682
G++ PE ++ + +P +D+++ G V Y +IS
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 609 HRDIKPANILIDKNFRAKVADFGLA------KLTEVGSASVHTRLVGTFGYMPPEYAQYG 662
HRD+KP NIL+ + A + DFG+A KLT++G+ VGT Y PE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNT------VGTLYYXAPERFSES 210
Query: 663 EVSPKIDVYAFGVVLYELISA 683
+ + D+YA VLYE ++
Sbjct: 211 HATYRADIYALTCVLYECLTG 231
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V A + G A+KK+ + +K EL +L V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQ--HLRGSGKDTLTWSARMQIAL-DSARGLEYIH 600
+ + +L +LV E + + NL Q H+ + RM L G++++H
Sbjct: 92 FTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHE-------RMSYLLYQMLCGIKHLH 143
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ IHRD+KP+NI++ + K+ DFGLA+ + + T V T Y PE
Sbjct: 144 SAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--CTNFMMTPYVVTRYYRAPEVIL 198
Query: 661 YGEVSPKIDVYAFGVVLYELIS 682
+ +D+++ G ++ EL+
Sbjct: 199 GMGYAANVDIWSVGCIMGELVK 220
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL Q + Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLCQVI--------------QMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 130 YLHSINIA---HRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTEPCYTPYYV 184
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILL 211
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 44/208 (21%)
Query: 498 IGQGGFGAVF--YAELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V Y + AIKK+ + +K EL ++ V+H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 550 YCVEGSL------FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR--------- 594
+ + SL ++V E + + NL Q + Q+ LD R
Sbjct: 92 FTPQKSLEEFQDVYIVMELM-DANLCQVI--------------QMELDHERMSYLLYQML 136
Query: 595 -GLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGY 653
G++++H + IHRD+KP+NI++ + K+ DFGLA+ G++ + V T Y
Sbjct: 137 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRYY 191
Query: 654 MPPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE +D+++ G ++ E++
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 30/203 (14%)
Query: 498 IGQGGFGAVFYA--ELRGEKAAIKKM-----DMQASKEFLAELKVLTHVHHLNLVRLIG- 549
IG G G V A + G A+KK+ + +K EL +L V+H N++ L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 550 YCVEGSL------FLVYEYIENGNLNQ--HLRGSGKDTLTWSARMQIAL-DSARGLEYIH 600
+ + +L +LV E + + NL Q H+ + RM L G++++H
Sbjct: 90 FTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHE-------RMSYLLYQMLCGIKHLH 141
Query: 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ 660
+ IHRD+KP+NI++ + K+ DFGLA+ + + T V T Y PE
Sbjct: 142 SAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTA--STNFMMTPYVVTRYYRAPEVIL 196
Query: 661 YGEVSPKIDVYAFGVVLYELISA 683
+D+++ G ++ EL+
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKG 219
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 131 YLHSINIA---HRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 185
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 186 APEVLGPEKYDKSCDMWSLGVIMYILL 212
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 138 YLHSINI---AHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 192
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 193 APEVLGPEKYDKSCDMWSLGVIMYILL 219
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 136 YLHSINI---AHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 190
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 191 APEVLGPEKYDKSCDMWSLGVIMYILL 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 137 YLHSINI---AHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 191
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 192 APEVLGPEKYDKSCDMWSLGVIMYILL 218
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 31/221 (14%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 531 AELKVLTHVHH--LNLVRLIGYCVE-GSLFLVYEYIEN-GNLNQHL--RGSGKDTLTWSA 584
E+ +L V ++RL+ + S L+ E +E +L + RG+ ++ L S
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSF 119
Query: 585 RMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASV 643
Q+ L++ R H H V +HRDIK NILID N K+ DFG L + +V
Sbjct: 120 FWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTV 169
Query: 644 HTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 170 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 118
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 119 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 168
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 169 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 146 YLHSINI---AHRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 200
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 201 APEVLGPEKYDKSCDMWSLGVIMYILL 227
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 176 YLHSINIA---HRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 230
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 231 APEVLGPEKYDKSCDMWSLGVIMYILL 257
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 130 YLHSINIA---HRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 184
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 185 APEVLGPEKYDKSCDMWSLGVIMYILL 211
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 132
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 133 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 182
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 183 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 132 YLHSINIA---HRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 186
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILL 213
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 132
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 133 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 182
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 183 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 133
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 134 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 183
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 184 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 132 YLHSINIA---HRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 186
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 187 APEVLGPEKYDKSCDMWSLGVIMYILL 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 543 NLVRLIG-----YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
++VR++ Y L +V E ++ G L ++ G T +I ++
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 598 YIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654
Y+H + HRD+KP N+L N K+ DFG AK E S + T T Y+
Sbjct: 182 YLHSINIA---HRDVKPENLLYTSKRPNAILKLTDFGFAK--ETTSHNSLTTPCYTPYYV 236
Query: 655 PPEYAQYGEVSPKIDVYAFGVVLYELI 681
PE + D+++ GV++Y L+
Sbjct: 237 APEVLGPEKYDKSCDMWSLGVIMYILL 263
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 2 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 118
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 119 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 168
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 169 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------LAELKVLT 537
+ + +G +G GGFG+V Y+ +R AIK ++ ++ E+ +L
Sbjct: 9 SQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 67
Query: 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTWSARMQIA 589
V ++RL+ + F++ +E Q L RG+ ++ L S Q+
Sbjct: 68 KVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQV- 124
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASVHTRLV 648
L++ R H H V +HRDIK NILID N K+ DFG L + +V+T
Sbjct: 125 LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFD 175
Query: 649 GTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 176 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 209
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 1 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 59
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 60 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 117
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 118 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 167
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 168 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELR----GEKAAIKKM----DMQASKEFLAELKV-LTHVH 540
+D ++G+G +G V ++R G+ A+K++ + Q K L +L + + V
Sbjct: 51 DDLEPIMELGRGAYGVV--EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD 108
Query: 541 HLNLVRLIGYCV-EGSLFLVYEYIENG--NLNQHLRGSGKDTLTWSARMQIALDSARGLE 597
V G EG +++ E ++ + + G+ T+ +IA+ + LE
Sbjct: 109 CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQ-TIPEDILGKIAVSIVKALE 167
Query: 598 YIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657
++H IHRD+KP+N+LI+ + K+ DFG++ + + T G YM PE
Sbjct: 168 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGY--LVDSVAKTIDAGCKPYMAPE 223
Query: 658 YA-----QYGEVSPKIDVYAFGVVLYEL 680
Q G S K D+++ G+ + EL
Sbjct: 224 RINPELNQKG-YSVKSDIWSLGITMIEL 250
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 133
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 134 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 183
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 184 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 133
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 134 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 183
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 184 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------LAELKVLT 537
+ + +G +G GGFG+V Y+ +R AIK ++ ++ E+ +L
Sbjct: 37 SQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTWSARMQIA 589
V ++RL+ + F++ +E Q L RG+ ++ L S Q+
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQV- 152
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASVHTRLV 648
L++ R H H V +HRDIK NILID N K+ DFG L + +V+T
Sbjct: 153 LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFD 203
Query: 649 GTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------LAELKVLT 537
+ + +G +G GGFG+V Y+ +R AIK ++ ++ E+ +L
Sbjct: 4 SQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62
Query: 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTWSARMQIA 589
V ++RL+ + F++ +E Q L RG+ ++ L S Q+
Sbjct: 63 KVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQV- 119
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASVHTRLV 648
L++ R H H V +HRDIK NILID N K+ DFG L + +V+T
Sbjct: 120 LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFD 170
Query: 649 GTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 12/111 (10%)
Query: 573 RGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFG 631
RG+ ++ L S Q+ L++ R H H V +HRDIK NILID N K+ DFG
Sbjct: 151 RGALQEELARSFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFG 203
Query: 632 LAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
L + +V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 204 SGALLK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------LAELKVLT 537
+ + +G +G GGFG+V Y+ +R AIK ++ ++ E+ +L
Sbjct: 37 SQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTWSARMQIA 589
V ++RL+ + F++ +E Q L RG+ ++ L S Q+
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQV- 152
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASVHTRLV 648
L++ R H H V +HRDIK NILID N K+ DFG L + +V+T
Sbjct: 153 LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFD 203
Query: 649 GTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 573 RGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFG 631
RG+ ++ L S Q+ L++ R H H V +HRDIK NILID N K+ DFG
Sbjct: 104 RGALQEELARSFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFG 156
Query: 632 LAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
L + +V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 157 SGALLK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------LAELKVLT 537
+ + +G +G GGFG+V Y+ +R AIK ++ ++ E+ +L
Sbjct: 36 SQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTWSARMQIA 589
V ++RL+ + F++ +E Q L RG+ ++ L S Q+
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQV- 151
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASVHTRLV 648
L++ R H H V +HRDIK NILID N K+ DFG L + +V+T
Sbjct: 152 LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFD 202
Query: 649 GTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 146
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 147 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 196
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 197 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 103/221 (46%), Gaps = 35/221 (15%)
Query: 483 EELAKATNDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------L 530
+E + + +G +G GGFG+V Y+ +R AIK ++ ++
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 531 AELKVLTHVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTW 582
E+ +L V ++RL+ + F++ +E Q L RG+ ++ L
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELAR 145
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641
S Q+ L++ R H H V +HRDIK NILID N K+ DFG L +
Sbjct: 146 SFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---D 195
Query: 642 SVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
+V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 196 TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 573 RGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFG 631
RG+ ++ L S Q+ L++ R H H V +HRDIK NILID N K+ DFG
Sbjct: 107 RGALQEELARSFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFG 159
Query: 632 LAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
L + +V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 160 SGALLK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 12/111 (10%)
Query: 573 RGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFG 631
RG+ ++ L S Q+ L++ R H H V +HRDIK NILID N K+ DFG
Sbjct: 151 RGALQEELARSFFWQV-LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFG 203
Query: 632 LAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
L + +V+T GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 204 SGALLK---DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------LAELKVLT 537
+ + +G +G GGFG+V Y+ +R AIK ++ ++ E+ +L
Sbjct: 51 SQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 109
Query: 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTWSARMQIA 589
V ++RL+ + F++ +E Q L RG+ ++ L S Q+
Sbjct: 110 KVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQV- 166
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASVHTRLV 648
L++ R H H V +HRDIK NILID N K+ DFG L + +V+T
Sbjct: 167 LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFD 217
Query: 649 GTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 218 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------LAELKVLT 537
+ + +G +G GGFG+V Y+ +R AIK ++ ++ E+ +L
Sbjct: 36 SQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTWSARMQIA 589
V ++RL+ + F++ +E Q L RG+ ++ L S Q+
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQV- 151
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASVHTRLV 648
L++ R H H V +HRDIK NILID N K+ DFG L + +V+T
Sbjct: 152 LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFD 202
Query: 649 GTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------LAELKVLT 537
+ + +G +G GGFG+V Y+ +R AIK ++ ++ E+ +L
Sbjct: 37 SQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 95
Query: 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTWSARMQIA 589
V ++RL+ + F++ +E Q L RG+ ++ L S Q+
Sbjct: 96 KVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQV- 152
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASVHTRLV 648
L++ R H H V +HRDIK NILID N K+ DFG L + +V+T
Sbjct: 153 LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFD 203
Query: 649 GTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELI 681
GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 204 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 490 NDFSMGNKIGQGGFGAVFYAELRGEK---AAIKKMDMQASKEF---------LAELKVLT 537
+ + +G +G GGFG+V Y+ +R AIK ++ ++ E+ +L
Sbjct: 36 SQYQVGPLLGSGGFGSV-YSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 94
Query: 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQHL------RGSGKDTLTWSARMQIA 589
V ++RL+ + F++ +E Q L RG+ ++ L S Q+
Sbjct: 95 KVSSGFSGVIRLLDWFERPDSFVLI--LERPEPVQDLFDFITERGALQEELARSFFWQV- 151
Query: 590 LDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASVHTRLV 648
L++ R H H V +HRDIK NILID N K+ DFG L + +V+T
Sbjct: 152 LEAVR-----HCHNCGV-LHRDIKDENILIDLNRGELKLIDFGSGALLK---DTVYTDFD 202
Query: 649 GTFGYMPPEYAQYGEVSPK-IDVYAFGVVLYELISA 683
GT Y PPE+ +Y + V++ G++LY+++
Sbjct: 203 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 29/221 (13%)
Query: 484 ELAKATNDFSMGNKIGQGGFGAVFY-AELRGEKAAIKKM--------------DMQASKE 528
EL + +++ I G +GAV + G AIK++ D K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 529 FLAELKVLTHVHHLNLVRLIGYCVE------GSLFLVYEYIENGNLNQHLRGSGKDTLTW 582
L E+++L H HH N++ L V L+LV E + +L Q + + ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQ-RIVISP 133
Query: 583 SARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642
GL +HE V +HRD+ P NIL+ N + DF LA+ E + +
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAR--EDTADA 188
Query: 643 VHTRLVGTFGYMPPEYA-QYGEVSPKIDVYAFGVVLYELIS 682
T V Y PE Q+ + +D+++ G V+ E+ +
Sbjct: 189 NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,100,861
Number of Sequences: 62578
Number of extensions: 877282
Number of successful extensions: 4934
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 2158
Number of HSP's gapped (non-prelim): 1244
length of query: 790
length of database: 14,973,337
effective HSP length: 107
effective length of query: 683
effective length of database: 8,277,491
effective search space: 5653526353
effective search space used: 5653526353
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)