Query 046083
Match_columns 790
No_of_seqs 614 out of 4336
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 08:33:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046083.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046083hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 2.6E-51 5.6E-56 445.2 27.8 286 476-768 61-355 (361)
2 KOG0192 Tyrosine kinase specif 100.0 2.5E-45 5.5E-50 395.4 23.9 251 493-767 44-305 (362)
3 KOG0197 Tyrosine kinases [Sign 100.0 9E-45 1.9E-49 389.0 18.1 259 478-768 201-464 (468)
4 KOG0581 Mitogen-activated prot 100.0 4.1E-44 8.9E-49 367.2 18.3 255 493-772 82-346 (364)
5 KOG1026 Nerve growth factor re 100.0 6.8E-43 1.5E-47 391.6 18.1 257 489-770 485-767 (774)
6 KOG0595 Serine/threonine-prote 100.0 3.5E-42 7.5E-47 355.5 20.9 196 489-691 9-218 (429)
7 KOG0575 Polo-like serine/threo 100.0 1.1E-41 2.3E-46 368.4 21.1 246 490-764 18-272 (592)
8 KOG0598 Ribosomal protein S6 k 100.0 8.6E-42 1.9E-46 350.1 17.2 263 489-789 24-295 (357)
9 KOG0591 NIMA (never in mitosis 100.0 2E-42 4.4E-47 339.5 10.3 250 490-763 19-283 (375)
10 KOG0615 Serine/threonine prote 100.0 9.1E-42 2E-46 351.5 15.0 251 489-764 171-440 (475)
11 KOG0196 Tyrosine kinase, EPH ( 100.0 9.8E-42 2.1E-46 373.9 14.9 257 491-773 630-899 (996)
12 KOG0198 MEKK and related serin 100.0 6.4E-40 1.4E-44 342.9 16.0 254 490-767 17-282 (313)
13 KOG4721 Serine/threonine prote 100.0 3.7E-40 8.1E-45 349.1 11.6 249 478-765 119-368 (904)
14 KOG0582 Ste20-like serine/thre 100.0 1.2E-38 2.6E-43 331.4 22.6 257 489-761 25-293 (516)
15 KOG0592 3-phosphoinositide-dep 100.0 3.9E-39 8.5E-44 342.5 18.4 249 486-762 69-339 (604)
16 KOG0616 cAMP-dependent protein 100.0 5.9E-39 1.3E-43 317.9 18.3 259 490-789 44-311 (355)
17 KOG0593 Predicted protein kina 100.0 1.7E-39 3.7E-44 322.0 14.2 259 490-760 2-283 (396)
18 cd05102 PTKc_VEGFR3 Catalytic 100.0 1E-38 2.2E-43 348.9 21.9 256 488-767 5-336 (338)
19 KOG0661 MAPK related serine/th 100.0 1.5E-39 3.3E-44 340.7 12.7 261 489-762 9-292 (538)
20 KOG1095 Protein tyrosine kinas 100.0 6.7E-39 1.5E-43 372.1 19.5 257 489-770 691-966 (1025)
21 PHA02988 hypothetical protein; 100.0 3.6E-38 7.7E-43 335.7 23.4 254 479-767 14-281 (283)
22 KOG0600 Cdc2-related protein k 100.0 4.3E-39 9.2E-44 339.7 15.6 259 490-761 117-400 (560)
23 KOG0193 Serine/threonine prote 100.0 6E-39 1.3E-43 345.0 15.1 265 481-768 383-656 (678)
24 KOG0597 Serine-threonine prote 100.0 8.2E-39 1.8E-43 339.5 15.1 242 490-761 2-251 (808)
25 KOG4278 Protein tyrosine kinas 100.0 8.7E-39 1.9E-43 340.9 14.6 262 483-769 260-527 (1157)
26 KOG0194 Protein tyrosine kinas 100.0 1.8E-38 3.9E-43 346.2 16.9 257 489-771 156-426 (474)
27 KOG0578 p21-activated serine/t 100.0 2.9E-38 6.2E-43 339.2 16.4 246 491-763 274-525 (550)
28 KOG0694 Serine/threonine prote 100.0 7.7E-38 1.7E-42 342.0 18.5 264 488-790 366-639 (694)
29 KOG2052 Activin A type IB rece 100.0 3.4E-37 7.3E-42 320.5 21.8 263 489-771 210-509 (513)
30 KOG1094 Discoidin domain recep 100.0 9.8E-38 2.1E-42 332.4 18.1 261 488-766 536-805 (807)
31 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.4E-37 9.6E-42 324.2 23.1 251 489-765 4-265 (266)
32 KOG0659 Cdk activating kinase 100.0 2.1E-37 4.6E-42 302.6 18.7 262 490-763 2-283 (318)
33 KOG3653 Transforming growth fa 100.0 4.6E-37 1E-41 321.8 22.2 272 492-771 212-509 (534)
34 KOG0583 Serine/threonine prote 100.0 4.5E-37 9.7E-42 334.6 22.7 250 488-766 15-280 (370)
35 cd05108 PTKc_EGFR Catalytic do 100.0 6.6E-37 1.4E-41 331.4 23.5 257 490-772 7-275 (316)
36 cd05052 PTKc_Abl Catalytic dom 100.0 8.8E-37 1.9E-41 321.2 23.5 251 490-765 6-262 (263)
37 PF07714 Pkinase_Tyr: Protein 100.0 1.9E-37 4.1E-42 325.7 18.2 244 494-762 3-259 (259)
38 KOG0585 Ca2+/calmodulin-depend 100.0 2.2E-37 4.7E-42 323.8 17.6 259 483-767 90-378 (576)
39 cd05072 PTKc_Lyn Catalytic dom 100.0 8E-37 1.7E-41 321.0 22.2 252 489-765 5-261 (261)
40 KOG0663 Protein kinase PITSLRE 100.0 1.6E-37 3.4E-42 312.0 15.4 263 490-763 76-363 (419)
41 cd05104 PTKc_Kit Catalytic dom 100.0 6.5E-37 1.4E-41 339.1 21.7 252 489-764 34-373 (375)
42 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-36 2.5E-41 323.8 22.7 250 490-764 5-282 (283)
43 KOG0588 Serine/threonine prote 100.0 1.2E-37 2.6E-42 337.5 14.9 246 492-767 14-269 (786)
44 cd05071 PTKc_Src Catalytic dom 100.0 2.4E-36 5.3E-41 317.8 24.2 252 489-765 5-260 (262)
45 cd05068 PTKc_Frk_like Catalyti 100.0 2.1E-36 4.5E-41 317.9 23.4 252 489-765 5-261 (261)
46 KOG0201 Serine/threonine prote 100.0 3.9E-38 8.5E-43 327.8 10.0 243 491-761 14-263 (467)
47 cd05106 PTKc_CSF-1R Catalytic 100.0 8.4E-37 1.8E-41 337.9 21.2 255 488-766 36-373 (374)
48 cd05631 STKc_GRK4 Catalytic do 100.0 1.4E-36 3E-41 323.9 22.0 248 491-762 1-262 (285)
49 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.1E-36 4.6E-41 317.0 22.9 248 490-763 4-256 (256)
50 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.9E-36 4.1E-41 318.1 22.5 250 490-764 6-259 (260)
51 cd05111 PTK_HER3 Pseudokinase 100.0 3.1E-36 6.8E-41 320.1 23.9 257 490-772 7-275 (279)
52 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.3E-36 4.9E-41 317.5 22.2 251 489-764 5-259 (260)
53 cd05054 PTKc_VEGFR Catalytic d 100.0 2.1E-36 4.5E-41 330.2 22.3 255 489-767 6-335 (337)
54 KOG0605 NDR and related serine 100.0 9.3E-37 2E-41 325.0 18.6 262 488-788 139-458 (550)
55 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.8E-36 4E-41 318.1 20.2 252 488-765 4-261 (261)
56 cd05069 PTKc_Yes Catalytic dom 100.0 5.5E-36 1.2E-40 314.7 23.6 250 490-764 6-259 (260)
57 cd05096 PTKc_DDR1 Catalytic do 100.0 4.1E-36 8.9E-41 323.3 23.2 256 490-763 5-303 (304)
58 cd05033 PTKc_EphR Catalytic do 100.0 6E-36 1.3E-40 315.4 23.9 251 489-765 3-265 (266)
59 cd07848 STKc_CDKL5 Catalytic d 100.0 3.8E-36 8.3E-41 320.6 22.7 261 490-761 1-284 (287)
60 cd05612 STKc_PRKX_like Catalyt 100.0 1.5E-36 3.3E-41 324.6 19.5 242 490-763 1-256 (291)
61 PLN00113 leucine-rich repeat r 100.0 9.5E-36 2.1E-40 369.6 29.5 271 480-772 683-958 (968)
62 PTZ00263 protein kinase A cata 100.0 2.2E-36 4.8E-41 329.1 20.2 241 490-762 18-272 (329)
63 cd05082 PTKc_Csk Catalytic dom 100.0 7.4E-36 1.6E-40 312.8 23.2 247 490-765 6-256 (256)
64 KOG4257 Focal adhesion tyrosin 100.0 1.1E-36 2.4E-41 325.9 17.0 253 489-767 388-651 (974)
65 cd05113 PTKc_Btk_Bmx Catalytic 100.0 5.1E-36 1.1E-40 314.2 21.8 248 490-763 4-256 (256)
66 cd05109 PTKc_HER2 Catalytic do 100.0 8.8E-36 1.9E-40 316.5 23.9 258 489-772 6-275 (279)
67 KOG0580 Serine/threonine prote 100.0 6.7E-37 1.4E-41 295.1 13.7 248 489-765 21-277 (281)
68 cd06649 PKc_MEK2 Catalytic dom 100.0 1.5E-35 3.3E-40 322.8 26.2 264 489-764 4-304 (331)
69 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.4E-36 7.5E-41 328.3 21.1 250 490-763 1-259 (333)
70 cd05105 PTKc_PDGFR_alpha Catal 100.0 7.4E-36 1.6E-40 332.0 23.9 255 489-767 36-399 (400)
71 cd05039 PTKc_Csk_like Catalyti 100.0 1.3E-35 2.7E-40 311.0 24.2 248 489-765 5-256 (256)
72 cd05116 PTKc_Syk Catalytic dom 100.0 9.9E-36 2.1E-40 312.1 22.8 241 497-764 2-254 (257)
73 KOG1989 ARK protein kinase fam 100.0 4.1E-36 8.9E-41 339.0 21.0 256 489-770 36-316 (738)
74 cd05059 PTKc_Tec_like Catalyti 100.0 7.7E-36 1.7E-40 312.8 21.7 247 490-762 4-255 (256)
75 PHA03212 serine/threonine kina 100.0 7.6E-36 1.6E-40 331.6 22.8 265 489-763 91-378 (391)
76 cd05093 PTKc_TrkB Catalytic do 100.0 1.2E-35 2.6E-40 317.1 23.4 259 489-772 4-286 (288)
77 KOG2345 Serine/threonine prote 100.0 1.7E-36 3.7E-41 293.4 14.6 257 489-765 20-300 (302)
78 cd05062 PTKc_IGF-1R Catalytic 100.0 8.4E-36 1.8E-40 316.3 21.4 251 488-763 4-276 (277)
79 cd07862 STKc_CDK6 Catalytic do 100.0 1.1E-35 2.3E-40 317.6 22.3 259 490-760 1-286 (290)
80 cd05571 STKc_PKB Catalytic dom 100.0 5.2E-36 1.1E-40 325.4 20.1 237 496-761 1-251 (323)
81 cd05115 PTKc_Zap-70 Catalytic 100.0 2E-35 4.3E-40 310.0 23.3 243 497-765 2-255 (257)
82 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.1E-35 4.5E-40 314.3 23.6 262 492-766 6-282 (283)
83 cd05090 PTKc_Ror1 Catalytic do 100.0 1.8E-35 3.9E-40 314.7 23.1 250 490-764 5-282 (283)
84 cd05073 PTKc_Hck Catalytic dom 100.0 2.9E-35 6.3E-40 309.1 24.1 251 489-764 5-259 (260)
85 cd05083 PTKc_Chk Catalytic dom 100.0 1.5E-35 3.2E-40 310.1 21.6 246 490-764 6-253 (254)
86 cd05045 PTKc_RET Catalytic dom 100.0 2.4E-35 5.2E-40 315.0 23.6 252 491-767 1-288 (290)
87 cd05094 PTKc_TrkC Catalytic do 100.0 2.1E-35 4.6E-40 315.7 23.1 255 490-769 5-286 (291)
88 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2E-35 4.3E-40 315.5 22.6 261 490-761 5-285 (288)
89 cd05049 PTKc_Trk Catalytic dom 100.0 1.8E-35 3.8E-40 314.1 22.1 249 490-763 5-279 (280)
90 cd08529 STKc_FA2-like Catalyti 100.0 3.1E-35 6.7E-40 307.6 23.6 245 491-761 1-253 (256)
91 PTZ00426 cAMP-dependent protei 100.0 8.8E-36 1.9E-40 325.5 20.2 241 490-762 30-285 (340)
92 cd05084 PTKc_Fes Catalytic dom 100.0 3E-35 6.5E-40 307.3 23.3 242 496-763 1-251 (252)
93 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.7E-35 5.9E-40 321.7 23.8 261 491-763 1-292 (338)
94 cd05596 STKc_ROCK Catalytic do 100.0 7.5E-36 1.6E-40 330.0 19.2 252 487-763 40-306 (370)
95 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.6E-36 1.2E-40 328.9 17.9 249 490-763 1-287 (350)
96 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.1E-35 4.7E-40 328.2 22.7 255 488-766 35-400 (401)
97 cd05055 PTKc_PDGFR Catalytic d 100.0 3.9E-35 8.4E-40 315.5 23.8 253 489-765 34-301 (302)
98 cd08228 STKc_Nek6 Catalytic do 100.0 5E-35 1.1E-39 308.3 24.2 254 490-766 2-266 (267)
99 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2E-35 4.3E-40 317.8 21.5 265 489-764 4-291 (303)
100 cd05089 PTKc_Tie1 Catalytic do 100.0 4.1E-35 8.8E-40 314.5 23.7 253 490-769 2-279 (297)
101 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-35 3.1E-40 321.8 20.5 237 496-761 1-251 (323)
102 cd05056 PTKc_FAK Catalytic dom 100.0 4.2E-35 9.2E-40 309.6 23.4 253 490-768 6-268 (270)
103 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.4E-35 9.6E-40 311.9 23.7 262 490-765 4-283 (284)
104 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.9E-35 6.4E-40 312.2 22.0 250 489-763 5-276 (277)
105 KOG0199 ACK and related non-re 100.0 3.6E-36 7.8E-41 325.8 14.9 248 492-764 112-371 (1039)
106 cd05075 PTKc_Axl Catalytic dom 100.0 6.3E-35 1.4E-39 308.4 24.2 249 492-765 1-271 (272)
107 cd05034 PTKc_Src_like Catalyti 100.0 5.4E-35 1.2E-39 307.0 23.5 252 488-764 4-260 (261)
108 cd05053 PTKc_FGFR Catalytic do 100.0 2.4E-35 5.2E-40 315.4 21.2 254 488-766 10-292 (293)
109 cd05585 STKc_YPK1_like Catalyt 100.0 1.4E-35 3E-40 320.5 19.5 235 498-761 1-247 (312)
110 cd05091 PTKc_Ror2 Catalytic do 100.0 2.4E-35 5.1E-40 313.8 20.9 249 491-764 6-282 (283)
111 cd05605 STKc_GRK4_like Catalyt 100.0 3E-35 6.6E-40 313.5 21.5 247 491-761 1-261 (285)
112 cd05060 PTKc_Syk_like Catalyti 100.0 5.6E-35 1.2E-39 306.3 23.1 243 496-765 1-255 (257)
113 cd05088 PTKc_Tie2 Catalytic do 100.0 4.4E-35 9.6E-40 315.1 22.6 256 490-772 7-287 (303)
114 cd05614 STKc_MSK2_N N-terminal 100.0 4.1E-35 8.9E-40 319.7 22.6 248 491-762 1-268 (332)
115 cd05043 PTK_Ryk Pseudokinase d 100.0 5.6E-35 1.2E-39 310.4 23.0 254 489-767 5-278 (280)
116 PTZ00283 serine/threonine prot 100.0 2.8E-35 6.1E-40 336.2 22.2 253 484-761 26-297 (496)
117 PTZ00267 NIMA-related protein 100.0 4.9E-35 1.1E-39 333.9 24.1 245 491-760 68-322 (478)
118 cd06650 PKc_MEK1 Catalytic dom 100.0 7E-35 1.5E-39 317.8 24.3 262 489-763 4-301 (333)
119 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.5E-35 1.2E-39 314.5 23.1 257 489-770 14-301 (304)
120 cd05593 STKc_PKB_gamma Catalyt 100.0 2.7E-35 5.8E-40 320.4 20.7 237 496-761 1-251 (328)
121 cd05098 PTKc_FGFR1 Catalytic d 100.0 4E-35 8.7E-40 316.1 22.0 254 490-768 18-302 (307)
122 KOG0611 Predicted serine/threo 100.0 4.3E-36 9.3E-41 307.0 13.4 244 489-763 52-305 (668)
123 cd05621 STKc_ROCK2 Catalytic d 100.0 1.7E-35 3.7E-40 326.9 19.4 255 484-763 37-306 (370)
124 cd05601 STKc_CRIK Catalytic do 100.0 1E-35 2.2E-40 324.1 17.5 248 490-761 1-263 (330)
125 cd05035 PTKc_Axl_like Catalyti 100.0 7.1E-35 1.5E-39 308.0 23.3 249 492-765 1-272 (273)
126 cd06625 STKc_MEKK3_like Cataly 100.0 8.3E-35 1.8E-39 305.8 23.6 247 490-762 2-261 (263)
127 cd05103 PTKc_VEGFR2 Catalytic 100.0 4.9E-35 1.1E-39 320.5 22.5 256 489-768 6-342 (343)
128 cd05628 STKc_NDR1 Catalytic do 100.0 5.5E-35 1.2E-39 322.6 23.2 196 490-690 1-239 (363)
129 cd05599 STKc_NDR_like Catalyti 100.0 2.3E-35 5.1E-40 325.8 20.2 248 490-762 1-297 (364)
130 PLN00034 mitogen-activated pro 100.0 2.8E-35 6.1E-40 323.7 20.7 245 491-764 75-331 (353)
131 cd05092 PTKc_TrkA Catalytic do 100.0 6.6E-35 1.4E-39 310.1 22.8 249 490-763 5-279 (280)
132 cd05622 STKc_ROCK1 Catalytic d 100.0 3.8E-35 8.3E-40 324.3 21.4 257 482-763 35-306 (371)
133 cd05085 PTKc_Fer Catalytic dom 100.0 1.1E-34 2.4E-39 302.5 23.7 242 496-763 1-249 (250)
134 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.6E-35 2.1E-39 306.5 23.4 251 489-765 4-267 (268)
135 cd06637 STKc_TNIK Catalytic do 100.0 4.5E-35 9.8E-40 309.5 20.9 250 487-761 3-269 (272)
136 cd05626 STKc_LATS2 Catalytic d 100.0 4.6E-35 1E-39 325.3 21.9 248 491-762 2-306 (381)
137 KOG0658 Glycogen synthase kina 100.0 4.2E-36 9.1E-41 307.5 12.4 257 492-761 26-306 (364)
138 cd08229 STKc_Nek7 Catalytic do 100.0 1E-34 2.2E-39 305.9 23.2 254 490-766 2-266 (267)
139 cd05032 PTKc_InsR_like Catalyt 100.0 6E-35 1.3E-39 309.5 21.4 250 489-763 5-276 (277)
140 cd05584 STKc_p70S6K Catalytic 100.0 4.4E-35 9.6E-40 318.1 20.8 237 496-761 2-256 (323)
141 PRK13184 pknD serine/threonine 100.0 1.4E-34 3.1E-39 338.9 26.5 264 490-776 2-301 (932)
142 KOG0594 Protein kinase PCTAIRE 100.0 3.7E-35 8E-40 301.5 18.7 261 490-761 11-302 (323)
143 cd05066 PTKc_EphR_A Catalytic 100.0 1.1E-34 2.4E-39 306.0 23.0 250 490-765 4-266 (267)
144 cd05608 STKc_GRK1 Catalytic do 100.0 8E-35 1.7E-39 309.5 22.1 241 498-761 1-257 (280)
145 cd05589 STKc_PKN Catalytic dom 100.0 6.2E-35 1.3E-39 317.1 21.3 240 492-761 1-257 (324)
146 cd05607 STKc_GRK7 Catalytic do 100.0 7.6E-35 1.6E-39 309.2 21.4 244 498-764 1-253 (277)
147 KOG0589 Serine/threonine prote 100.0 8.6E-36 1.9E-40 319.2 14.0 248 490-763 4-260 (426)
148 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3E-34 6.5E-39 302.2 25.6 253 490-766 2-266 (267)
149 cd05061 PTKc_InsR Catalytic do 100.0 1.2E-34 2.6E-39 309.3 22.8 254 488-766 4-279 (288)
150 cd05618 STKc_aPKC_iota Catalyt 100.0 8.7E-35 1.9E-39 316.5 21.9 246 496-761 1-262 (329)
151 cd05112 PTKc_Itk Catalytic dom 100.0 1.5E-34 3.3E-39 302.7 22.9 248 490-763 4-256 (256)
152 cd05588 STKc_aPKC Catalytic do 100.0 9.7E-35 2.1E-39 316.2 22.0 246 496-761 1-262 (329)
153 cd05587 STKc_cPKC Catalytic do 100.0 8.6E-35 1.9E-39 316.0 21.3 242 491-761 1-257 (324)
154 cd05629 STKc_NDR_like_fungal C 100.0 5.5E-35 1.2E-39 324.4 20.0 249 490-763 1-307 (377)
155 cd08219 STKc_Nek3 Catalytic do 100.0 2E-34 4.3E-39 301.7 22.9 245 491-761 1-252 (255)
156 KOG0660 Mitogen-activated prot 100.0 2.4E-35 5.3E-40 301.4 15.4 274 489-774 21-323 (359)
157 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.4E-34 2.9E-39 313.0 22.2 256 489-769 11-297 (314)
158 cd05065 PTKc_EphR_B Catalytic 100.0 1.9E-34 4.1E-39 304.5 22.6 250 490-765 4-268 (269)
159 cd06619 PKc_MKK5 Catalytic dom 100.0 1.3E-34 2.8E-39 307.6 21.4 248 490-763 1-255 (279)
160 PTZ00036 glycogen synthase kin 100.0 9.3E-35 2E-39 327.9 21.5 263 488-763 64-353 (440)
161 cd05110 PTKc_HER4 Catalytic do 100.0 1.8E-34 4E-39 310.3 22.7 254 490-769 7-272 (303)
162 cd05594 STKc_PKB_alpha Catalyt 100.0 4.4E-35 9.5E-40 318.4 18.1 238 496-762 1-253 (325)
163 cd05051 PTKc_DDR Catalytic dom 100.0 2E-34 4.3E-39 308.7 22.5 257 489-763 4-295 (296)
164 cd05598 STKc_LATS Catalytic do 100.0 5.7E-35 1.2E-39 324.2 18.9 248 490-762 1-302 (376)
165 cd05057 PTKc_EGFR_like Catalyt 100.0 3.5E-34 7.6E-39 304.2 24.2 255 490-770 7-273 (279)
166 KOG1025 Epidermal growth facto 100.0 1.6E-35 3.5E-40 325.8 14.0 251 494-770 700-962 (1177)
167 cd05592 STKc_nPKC_theta_delta 100.0 1.4E-34 3.1E-39 313.1 21.3 236 496-760 1-247 (316)
168 cd05590 STKc_nPKC_eta Catalyti 100.0 1.1E-34 2.4E-39 314.5 20.2 237 496-761 1-253 (320)
169 cd05047 PTKc_Tie Catalytic dom 100.0 3E-34 6.4E-39 303.3 23.0 244 496-766 1-269 (270)
170 cd05591 STKc_nPKC_epsilon Cata 100.0 1E-34 2.2E-39 315.0 20.0 238 496-762 1-255 (321)
171 cd05050 PTKc_Musk Catalytic do 100.0 2.2E-34 4.8E-39 307.2 22.2 251 489-764 4-288 (288)
172 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-34 4.1E-39 319.4 22.4 261 491-763 1-290 (372)
173 cd06646 STKc_MAP4K5 Catalytic 100.0 2E-34 4.4E-39 303.8 21.6 249 490-762 9-266 (267)
174 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.2E-34 4.7E-39 306.7 22.0 265 490-765 4-283 (284)
175 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-34 2.5E-39 322.4 20.7 246 491-761 2-305 (382)
176 cd06615 PKc_MEK Catalytic doma 100.0 3.7E-34 8.1E-39 308.7 24.0 270 490-773 1-299 (308)
177 cd05616 STKc_cPKC_beta Catalyt 100.0 1.4E-34 3E-39 314.2 20.8 241 491-760 1-256 (323)
178 cd05097 PTKc_DDR_like Catalyti 100.0 2.4E-34 5.1E-39 308.2 22.3 256 490-763 5-294 (295)
179 cd05040 PTKc_Ack_like Catalyti 100.0 3.5E-34 7.5E-39 300.1 22.9 244 496-763 1-256 (257)
180 PHA03211 serine/threonine kina 100.0 1.8E-34 3.9E-39 324.7 22.0 264 489-761 168-455 (461)
181 cd08223 STKc_Nek4 Catalytic do 100.0 4.5E-34 9.8E-39 299.1 23.6 245 491-761 1-254 (257)
182 cd05582 STKc_RSK_N N-terminal 100.0 3.9E-35 8.4E-40 317.9 15.9 233 496-757 2-245 (318)
183 cd05046 PTK_CCK4 Pseudokinase 100.0 3.1E-34 6.8E-39 303.7 22.3 250 490-763 5-274 (275)
184 cd05630 STKc_GRK6 Catalytic do 100.0 2.3E-34 4.9E-39 306.8 21.3 249 491-763 1-263 (285)
185 cd05058 PTKc_Met_Ron Catalytic 100.0 5E-34 1.1E-38 299.8 23.4 245 496-766 1-260 (262)
186 cd05570 STKc_PKC Catalytic dom 100.0 2.1E-34 4.5E-39 312.1 20.9 237 496-761 1-252 (318)
187 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-34 2.6E-39 314.7 19.0 232 496-756 1-242 (323)
188 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.9E-34 8.5E-39 312.2 22.9 255 490-769 12-297 (334)
189 cd05632 STKc_GRK5 Catalytic do 100.0 4.2E-34 9.2E-39 304.7 22.6 247 491-761 1-261 (285)
190 cd05620 STKc_nPKC_delta Cataly 100.0 2.4E-34 5.3E-39 311.2 20.5 236 496-760 1-247 (316)
191 cd06651 STKc_MEKK3 Catalytic d 100.0 6.8E-34 1.5E-38 299.8 23.4 245 490-761 2-261 (266)
192 cd05597 STKc_DMPK_like Catalyt 100.0 4.4E-34 9.6E-39 311.3 22.5 252 490-763 1-268 (331)
193 cd05095 PTKc_DDR2 Catalytic do 100.0 5.5E-34 1.2E-38 305.5 22.6 258 489-764 4-296 (296)
194 cd06612 STKc_MST1_2 Catalytic 100.0 6.7E-34 1.5E-38 297.5 22.7 247 490-761 3-253 (256)
195 cd06609 STKc_MST3_like Catalyt 100.0 5E-34 1.1E-38 302.1 22.0 246 490-763 1-253 (274)
196 cd05619 STKc_nPKC_theta Cataly 100.0 3.8E-34 8.2E-39 309.7 21.4 236 496-760 1-247 (316)
197 KOG0610 Putative serine/threon 100.0 3.6E-34 7.7E-39 296.1 20.0 247 490-760 77-391 (459)
198 cd06624 STKc_ASK Catalytic dom 100.0 6.8E-34 1.5E-38 300.0 22.7 253 484-761 2-265 (268)
199 cd06654 STKc_PAK1 Catalytic do 100.0 8.2E-34 1.8E-38 304.2 23.5 247 490-763 20-272 (296)
200 cd05615 STKc_cPKC_alpha Cataly 100.0 4.5E-34 9.8E-39 310.1 21.7 236 491-755 1-246 (323)
201 cd07863 STKc_CDK4 Catalytic do 100.0 5.1E-34 1.1E-38 304.3 21.7 259 491-761 1-285 (288)
202 cd00192 PTKc Catalytic domain 100.0 9E-34 2E-38 296.9 23.2 243 496-763 1-262 (262)
203 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.4E-34 1.2E-38 303.1 21.8 265 490-765 4-283 (284)
204 cd07876 STKc_JNK2 Catalytic do 100.0 4.8E-34 1E-38 314.7 22.1 265 489-763 20-317 (359)
205 cd05623 STKc_MRCK_alpha Cataly 100.0 6E-34 1.3E-38 310.4 22.5 250 490-761 1-266 (332)
206 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.9E-34 1.1E-38 303.5 21.3 255 481-760 7-278 (282)
207 PTZ00284 protein kinase; Provi 100.0 8.2E-34 1.8E-38 323.6 24.5 267 483-764 122-441 (467)
208 cd08221 STKc_Nek9 Catalytic do 100.0 1E-33 2.2E-38 296.4 23.3 246 491-762 1-254 (256)
209 cd06638 STKc_myosinIIIA Cataly 100.0 5.4E-34 1.2E-38 303.7 21.2 259 480-762 8-284 (286)
210 cd05602 STKc_SGK1 Catalytic do 100.0 2.8E-34 6E-39 312.1 19.1 235 496-759 1-245 (325)
211 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.2E-34 1.1E-38 302.6 20.8 244 491-763 5-255 (277)
212 cd05603 STKc_SGK2 Catalytic do 100.0 3E-34 6.5E-39 311.3 19.1 232 496-756 1-242 (321)
213 cd07874 STKc_JNK3 Catalytic do 100.0 8.3E-34 1.8E-38 312.3 22.9 261 488-763 15-313 (355)
214 KOG0033 Ca2+/calmodulin-depend 100.0 5.1E-36 1.1E-40 288.8 4.4 249 489-763 10-269 (355)
215 cd05627 STKc_NDR2 Catalytic do 100.0 2.5E-34 5.5E-39 317.0 18.5 247 490-761 1-293 (360)
216 cd08218 STKc_Nek1 Catalytic do 100.0 1E-33 2.3E-38 296.3 22.2 245 491-761 1-253 (256)
217 cd05044 PTKc_c-ros Catalytic d 100.0 5.6E-34 1.2E-38 300.7 20.3 243 496-763 1-268 (269)
218 KOG0599 Phosphorylase kinase g 100.0 5.6E-35 1.2E-39 285.5 11.5 248 489-764 16-286 (411)
219 cd06631 STKc_YSK4 Catalytic do 100.0 1.1E-33 2.4E-38 297.8 22.3 245 491-760 1-261 (265)
220 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-33 2.7E-38 297.7 22.6 244 491-761 1-264 (267)
221 cd05624 STKc_MRCK_beta Catalyt 100.0 4.7E-34 1E-38 311.1 20.0 250 490-761 1-266 (331)
222 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.1E-33 2.3E-38 305.3 22.6 264 490-764 6-289 (309)
223 cd07875 STKc_JNK1 Catalytic do 100.0 1.5E-33 3.3E-38 311.3 24.3 257 489-763 23-320 (364)
224 KOG0574 STE20-like serine/thre 100.0 5.7E-36 1.2E-40 295.6 4.2 243 492-761 35-283 (502)
225 cd07868 STKc_CDK8 Catalytic do 100.0 1.7E-33 3.6E-38 304.8 24.0 193 495-691 6-220 (317)
226 cd05041 PTKc_Fes_like Catalyti 100.0 1.4E-33 3E-38 294.4 22.5 242 496-763 1-250 (251)
227 PF00069 Pkinase: Protein kina 100.0 4.7E-34 1E-38 299.3 18.9 248 492-761 1-257 (260)
228 cd05604 STKc_SGK3 Catalytic do 100.0 2.9E-34 6.3E-39 312.0 17.8 233 496-757 1-243 (325)
229 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.3E-33 2.7E-38 296.0 22.0 234 496-762 1-258 (259)
230 PHA03207 serine/threonine kina 100.0 1.2E-33 2.5E-38 315.1 23.0 264 489-763 91-377 (392)
231 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 8.2E-34 1.8E-38 299.7 20.6 247 496-763 1-268 (269)
232 smart00219 TyrKc Tyrosine kina 100.0 1.3E-33 2.8E-38 295.4 22.0 246 492-762 1-258 (258)
233 cd06652 STKc_MEKK2 Catalytic d 100.0 2E-33 4.3E-38 296.0 23.5 245 490-761 2-261 (265)
234 cd06640 STKc_MST4 Catalytic do 100.0 2.2E-33 4.8E-38 297.8 24.0 244 491-763 5-255 (277)
235 cd05574 STKc_phototropin_like 100.0 1.8E-33 3.9E-38 304.4 23.6 248 490-761 1-289 (316)
236 cd06639 STKc_myosinIIIB Cataly 100.0 1.3E-33 2.8E-38 301.7 22.2 258 480-761 12-287 (291)
237 cd07861 STKc_CDK1_euk Catalyti 100.0 1.2E-33 2.6E-38 300.7 21.8 262 491-761 1-282 (285)
238 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.2E-33 2.6E-38 300.9 21.6 255 490-765 5-270 (284)
239 KOG0986 G protein-coupled rece 100.0 9.4E-35 2E-39 302.0 12.6 278 480-790 174-461 (591)
240 cd08220 STKc_Nek8 Catalytic do 100.0 1.6E-33 3.6E-38 294.6 22.2 244 491-761 1-253 (256)
241 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.1E-33 2.4E-38 299.7 21.0 234 497-763 2-274 (274)
242 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.2E-33 2.6E-38 307.4 21.6 244 496-761 1-260 (327)
243 KOG0667 Dual-specificity tyros 100.0 5.1E-34 1.1E-38 312.5 18.4 261 491-764 187-505 (586)
244 KOG0032 Ca2+/calmodulin-depend 100.0 1.3E-33 2.7E-38 307.3 21.4 248 489-763 34-295 (382)
245 cd08227 PK_STRAD_alpha Pseudok 100.0 8E-34 1.7E-38 308.8 19.9 259 494-763 2-309 (327)
246 PTZ00266 NIMA-related protein 100.0 1.2E-33 2.5E-38 332.4 22.4 250 488-761 11-295 (1021)
247 cd06643 STKc_SLK Catalytic dom 100.0 2.3E-33 5E-38 298.4 22.7 247 492-763 7-264 (282)
248 cd08217 STKc_Nek2 Catalytic do 100.0 2.8E-33 6.1E-38 293.9 22.9 245 491-761 1-262 (265)
249 cd06656 STKc_PAK3 Catalytic do 100.0 2E-33 4.4E-38 301.3 22.2 246 490-762 19-270 (297)
250 cd06644 STKc_STK10_LOK Catalyt 100.0 2.9E-33 6.2E-38 299.3 23.2 247 490-761 12-269 (292)
251 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.1E-33 6.6E-38 294.3 23.0 234 496-762 1-261 (262)
252 PHA03209 serine/threonine kina 100.0 1.9E-33 4.1E-38 309.5 22.4 264 488-761 64-351 (357)
253 cd06655 STKc_PAK2 Catalytic do 100.0 2.5E-33 5.5E-38 300.4 22.7 247 490-763 19-271 (296)
254 KOG0577 Serine/threonine prote 100.0 7.5E-35 1.6E-39 310.1 10.6 242 492-764 28-281 (948)
255 cd05042 PTKc_Aatyk Catalytic d 100.0 1.8E-33 4E-38 296.9 21.2 247 496-763 1-268 (269)
256 cd07867 STKc_CDC2L6 Catalytic 100.0 4.4E-33 9.5E-38 301.4 24.0 263 495-761 6-314 (317)
257 cd06608 STKc_myosinIII_like Ca 100.0 1.8E-33 4E-38 297.2 20.5 251 487-761 3-272 (275)
258 cd06645 STKc_MAP4K3 Catalytic 100.0 1.7E-33 3.8E-38 296.7 20.2 248 490-761 9-265 (267)
259 cd06613 STKc_MAP4K3_like Catal 100.0 4.7E-33 1E-37 292.1 23.5 249 489-760 2-259 (262)
260 cd06632 STKc_MEKK1_plant Catal 100.0 3.8E-33 8.2E-38 292.0 22.5 243 491-761 1-255 (258)
261 cd08528 STKc_Nek10 Catalytic d 100.0 3.7E-33 8E-38 294.5 22.4 247 491-763 1-268 (269)
262 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1E-33 2.2E-38 297.1 17.7 234 496-762 1-257 (258)
263 KOG0584 Serine/threonine prote 100.0 3.5E-34 7.7E-39 310.6 14.4 241 493-761 43-296 (632)
264 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.2E-33 9E-38 299.5 22.8 262 490-763 6-288 (301)
265 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.8E-33 1E-37 294.2 22.9 249 491-761 2-269 (272)
266 cd08225 STKc_Nek5 Catalytic do 100.0 3.1E-33 6.6E-38 292.7 21.1 245 491-761 1-254 (257)
267 KOG4717 Serine/threonine prote 100.0 7.8E-34 1.7E-38 298.0 16.4 243 492-763 20-272 (864)
268 cd07833 STKc_CDKL Catalytic do 100.0 3.6E-33 7.9E-38 297.4 21.8 261 490-760 1-284 (288)
269 KOG0596 Dual specificity; seri 100.0 3.8E-34 8.3E-39 304.3 14.0 246 490-761 361-627 (677)
270 cd05074 PTKc_Tyro3 Catalytic d 100.0 4.7E-33 1E-37 294.3 22.3 249 492-765 1-272 (273)
271 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.7E-33 1E-37 292.9 22.0 251 490-761 1-264 (267)
272 cd06611 STKc_SLK_like Catalyti 100.0 3E-33 6.5E-38 297.1 20.6 250 489-763 4-264 (280)
273 cd05609 STKc_MAST Catalytic do 100.0 6E-33 1.3E-37 298.8 23.2 259 490-773 1-282 (305)
274 cd06626 STKc_MEKK4 Catalytic d 100.0 7.1E-33 1.5E-37 291.2 23.1 246 491-760 1-260 (264)
275 KOG1024 Receptor-like protein 100.0 3E-33 6.4E-38 285.7 19.4 260 481-765 275-555 (563)
276 cd06630 STKc_MEKK1 Catalytic d 100.0 5.2E-33 1.1E-37 293.0 22.0 248 491-761 1-264 (268)
277 cd07832 STKc_CCRK Catalytic do 100.0 4.9E-33 1.1E-37 296.1 22.0 261 491-761 1-282 (286)
278 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.2E-32 2.7E-37 293.7 24.8 256 490-764 1-269 (287)
279 cd07841 STKc_CDK7 Catalytic do 100.0 2.5E-33 5.5E-38 300.5 19.4 260 491-761 1-282 (298)
280 cd06641 STKc_MST3 Catalytic do 100.0 1E-32 2.3E-37 292.6 23.7 241 492-761 6-253 (277)
281 cd07847 STKc_CDKL1_4 Catalytic 100.0 9.2E-33 2E-37 294.0 23.2 261 490-761 1-283 (286)
282 cd06605 PKc_MAPKK Catalytic do 100.0 4.5E-33 9.8E-38 293.0 20.6 248 490-761 1-257 (265)
283 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.5E-33 3.3E-38 300.1 17.2 261 490-761 1-283 (286)
284 cd05580 STKc_PKA Catalytic dom 100.0 7.6E-33 1.7E-37 295.8 22.6 240 490-761 1-254 (290)
285 cd06623 PKc_MAPKK_plant_like C 100.0 1.6E-32 3.4E-37 288.4 23.4 247 490-761 1-256 (264)
286 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.3E-32 2.8E-37 290.5 22.5 247 496-763 1-267 (268)
287 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.9E-33 2.1E-37 293.4 21.8 247 490-762 1-262 (283)
288 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.9E-33 1.3E-37 304.1 20.3 257 488-763 13-300 (343)
289 cd06917 STKc_NAK1_like Catalyt 100.0 1.2E-32 2.7E-37 291.8 22.1 245 491-763 2-257 (277)
290 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1E-32 2.3E-37 293.9 21.5 249 490-763 1-264 (286)
291 cd05586 STKc_Sck1_like Catalyt 100.0 2.1E-33 4.6E-38 305.9 16.4 236 498-761 1-253 (330)
292 cd06607 STKc_TAO Catalytic dom 100.0 2E-32 4.2E-37 295.1 23.7 244 490-764 15-270 (307)
293 cd07839 STKc_CDK5 Catalytic do 100.0 4.1E-33 8.8E-38 296.7 17.8 261 491-761 1-281 (284)
294 cd06658 STKc_PAK5 Catalytic do 100.0 4.7E-33 1E-37 297.7 18.3 245 492-763 24-274 (292)
295 cd07860 STKc_CDK2_3 Catalytic 100.0 1.2E-32 2.6E-37 293.0 21.2 260 491-761 1-281 (284)
296 cd06647 STKc_PAK_I Catalytic d 100.0 1.3E-32 2.7E-37 294.6 21.1 246 490-762 19-270 (293)
297 cd07844 STKc_PCTAIRE_like Cata 100.0 1E-32 2.2E-37 294.8 20.3 261 490-761 5-288 (291)
298 cd06614 STKc_PAK Catalytic dom 100.0 1.5E-32 3.2E-37 292.8 21.5 251 488-763 17-272 (286)
299 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.6E-32 5.7E-37 287.3 23.1 245 490-761 2-261 (264)
300 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.4E-32 5.2E-37 292.0 23.0 263 488-760 3-287 (291)
301 cd07835 STKc_CDK1_like Catalyt 100.0 1E-32 2.3E-37 293.4 19.7 259 492-761 1-280 (283)
302 cd06635 STKc_TAO1 Catalytic do 100.0 4.3E-32 9.4E-37 293.9 24.5 250 492-772 27-288 (317)
303 cd06659 STKc_PAK6 Catalytic do 100.0 1.1E-32 2.3E-37 295.7 19.5 243 494-763 25-273 (297)
304 cd08530 STKc_CNK2-like Catalyt 100.0 2.5E-32 5.4E-37 285.5 21.7 243 491-761 1-253 (256)
305 cd06606 STKc_MAPKKK Catalytic 100.0 5.1E-32 1.1E-36 282.9 23.6 246 491-761 1-257 (260)
306 cd07843 STKc_CDC2L1 Catalytic 100.0 2.1E-32 4.5E-37 292.7 21.1 261 490-761 5-290 (293)
307 KOG4279 Serine/threonine prote 100.0 2.7E-33 5.8E-38 302.6 14.0 239 497-760 582-831 (1226)
308 cd05572 STKc_cGK_PKG Catalytic 100.0 2.8E-32 6.1E-37 286.6 21.4 239 498-762 1-253 (262)
309 cd07849 STKc_ERK1_2_like Catal 100.0 1.6E-32 3.5E-37 299.7 20.3 260 489-761 4-292 (336)
310 cd06648 STKc_PAK_II Catalytic 100.0 3.7E-32 7.9E-37 289.8 22.6 243 492-761 21-269 (285)
311 cd05122 PKc_STE Catalytic doma 100.0 4.5E-32 9.7E-37 282.1 22.5 245 491-761 1-251 (253)
312 cd06616 PKc_MKK4 Catalytic dom 100.0 1.6E-32 3.5E-37 292.7 19.3 250 491-763 5-269 (288)
313 cd05578 STKc_Yank1 Catalytic d 100.0 1.3E-32 2.8E-37 288.5 18.2 242 491-759 1-253 (258)
314 cd07850 STKc_JNK Catalytic dom 100.0 5.3E-32 1.1E-36 297.8 23.7 266 488-763 14-313 (353)
315 cd07836 STKc_Pho85 Catalytic d 100.0 7E-32 1.5E-36 287.1 23.9 260 491-761 1-281 (284)
316 cd08215 STKc_Nek Catalytic dom 100.0 4.7E-32 1E-36 283.3 22.2 245 491-761 1-255 (258)
317 PHA03210 serine/threonine kina 100.0 4E-32 8.6E-37 311.2 23.1 271 488-763 146-456 (501)
318 PLN00009 cyclin-dependent kina 100.0 4.2E-32 9.1E-37 290.6 21.1 261 490-761 2-284 (294)
319 cd07840 STKc_CDK9_like Catalyt 100.0 3.9E-32 8.5E-37 289.1 20.3 259 492-761 1-284 (287)
320 KOG0579 Ste20-like serine/thre 100.0 2.5E-33 5.4E-38 299.9 11.0 247 491-762 33-290 (1187)
321 cd07831 STKc_MOK Catalytic dom 100.0 1.4E-31 3E-36 284.4 24.4 255 492-761 1-279 (282)
322 cd05579 STKc_MAST_like Catalyt 100.0 3.4E-32 7.4E-37 285.7 19.5 238 498-763 1-256 (265)
323 cd05583 STKc_MSK_N N-terminal 100.0 5.4E-32 1.2E-36 288.8 21.2 259 491-773 1-275 (288)
324 cd07852 STKc_MAPK15 Catalytic 100.0 8E-32 1.7E-36 294.4 22.6 261 489-762 6-296 (337)
325 cd07842 STKc_CDK8_like Catalyt 100.0 6.2E-32 1.3E-36 292.1 21.4 266 491-761 1-313 (316)
326 cd05577 STKc_GRK Catalytic dom 100.0 7.9E-32 1.7E-36 285.9 21.8 240 498-761 1-254 (277)
327 cd07837 STKc_CdkB_plant Cataly 100.0 1.1E-31 2.4E-36 287.2 22.3 261 490-761 1-291 (295)
328 cd06627 STKc_Cdc7_like Catalyt 100.0 1.4E-31 2.9E-36 279.4 22.3 242 491-760 1-250 (254)
329 cd05633 STKc_GRK3 Catalytic do 100.0 9.9E-32 2.1E-36 285.6 21.4 239 497-763 1-257 (279)
330 PHA02882 putative serine/threo 100.0 1.7E-31 3.7E-36 286.0 23.3 252 490-762 12-293 (294)
331 cd08216 PK_STRAD Pseudokinase 100.0 4.9E-32 1.1E-36 292.9 19.3 261 493-763 5-297 (314)
332 PHA03390 pk1 serine/threonine- 100.0 1.4E-31 3E-36 282.5 22.2 247 483-760 7-261 (267)
333 cd07864 STKc_CDK12 Catalytic d 100.0 1.3E-31 2.8E-36 287.8 22.3 262 488-761 5-299 (302)
334 cd07830 STKc_MAK_like Catalyti 100.0 7.8E-32 1.7E-36 286.6 20.3 259 492-761 1-280 (283)
335 cd07845 STKc_CDK10 Catalytic d 100.0 1.3E-31 2.9E-36 288.9 22.2 263 489-763 6-292 (309)
336 cd07838 STKc_CDK4_6_like Catal 100.0 1.8E-31 3.9E-36 284.1 22.7 259 492-761 1-284 (287)
337 cd08226 PK_STRAD_beta Pseudoki 100.0 1.9E-31 4.1E-36 290.3 23.1 257 496-763 4-310 (328)
338 KOG0690 Serine/threonine prote 100.0 1E-32 2.2E-37 275.5 11.8 256 489-773 167-433 (516)
339 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9E-32 1.9E-36 294.0 20.4 267 489-767 4-299 (337)
340 KOG0200 Fibroblast/platelet-de 100.0 7.4E-32 1.6E-36 313.8 20.9 254 488-765 294-579 (609)
341 cd06634 STKc_TAO2 Catalytic do 100.0 1.3E-31 2.9E-36 288.8 21.4 253 491-774 16-280 (308)
342 cd07865 STKc_CDK9 Catalytic do 100.0 2.1E-31 4.6E-36 287.0 23.1 259 490-761 12-307 (310)
343 cd05613 STKc_MSK1_N N-terminal 100.0 1.7E-31 3.7E-36 285.3 22.0 247 491-761 1-268 (290)
344 cd07855 STKc_ERK5 Catalytic do 100.0 1.5E-31 3.2E-36 291.9 21.7 266 489-765 4-298 (334)
345 cd05581 STKc_PDK1 Catalytic do 100.0 6.6E-32 1.4E-36 286.2 18.3 243 490-760 1-276 (280)
346 cd06633 STKc_TAO3 Catalytic do 100.0 4.6E-31 9.9E-36 285.3 24.3 239 492-761 23-273 (313)
347 KOG0586 Serine/threonine prote 100.0 4E-32 8.6E-37 294.5 15.9 251 488-768 54-313 (596)
348 cd06618 PKc_MKK7 Catalytic dom 100.0 2.3E-31 5E-36 285.2 21.4 250 489-764 14-276 (296)
349 cd05611 STKc_Rim15_like Cataly 100.0 2.3E-31 5.1E-36 279.3 20.9 239 496-763 2-250 (260)
350 cd07879 STKc_p38delta_MAPK13 C 100.0 3.8E-31 8.3E-36 289.6 23.0 258 490-767 15-305 (342)
351 cd06657 STKc_PAK4 Catalytic do 100.0 2.6E-31 5.6E-36 284.3 20.7 240 495-761 25-270 (292)
352 cd08222 STKc_Nek11 Catalytic d 100.0 2.1E-31 4.6E-36 279.6 19.3 244 491-761 1-257 (260)
353 cd05118 STKc_CMGC Catalytic do 100.0 2.9E-31 6.3E-36 281.9 20.5 258 492-761 1-280 (283)
354 KOG4645 MAPKKK (MAP kinase kin 100.0 4.4E-33 9.5E-38 321.1 6.9 249 487-761 1232-1494(1509)
355 cd07834 STKc_MAPK Catalytic do 100.0 2.7E-31 5.8E-36 289.2 19.7 261 491-762 1-290 (330)
356 cd07880 STKc_p38gamma_MAPK12 C 100.0 7.8E-31 1.7E-35 287.2 23.4 258 488-764 13-301 (343)
357 KOG0666 Cyclin C-dependent kin 100.0 3.4E-32 7.4E-37 270.7 11.3 271 490-764 24-340 (438)
358 cd07866 STKc_BUR1 Catalytic do 100.0 2E-31 4.3E-36 287.3 18.2 263 489-761 7-308 (311)
359 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.3E-30 2.7E-35 285.8 24.4 266 481-763 8-302 (345)
360 KOG0983 Mitogen-activated prot 100.0 5.1E-32 1.1E-36 265.1 11.6 247 491-762 93-350 (391)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6E-31 1.3E-35 286.2 21.5 263 484-762 4-289 (328)
362 PTZ00024 cyclin-dependent prot 100.0 7.5E-31 1.6E-35 286.4 21.4 261 490-763 8-315 (335)
363 cd05606 STKc_beta_ARK Catalyti 100.0 9.6E-31 2.1E-35 277.8 20.8 238 497-762 1-256 (278)
364 KOG4250 TANK binding protein k 100.0 2E-31 4.4E-36 292.5 14.8 263 492-765 15-310 (732)
365 PRK06347 autolysin; Reviewed 100.0 6.5E-31 1.4E-35 295.5 18.6 241 76-333 329-592 (592)
366 cd07854 STKc_MAPK4_6 Catalytic 100.0 5.6E-31 1.2E-35 288.2 17.6 257 490-761 5-300 (342)
367 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-30 2.5E-35 277.2 19.2 258 492-761 1-279 (282)
368 cd05123 STKc_AGC Catalytic dom 100.0 1.9E-30 4.2E-35 270.3 20.0 231 498-757 1-240 (250)
369 PRK06347 autolysin; Reviewed 100.0 2.1E-30 4.6E-35 291.3 20.8 235 15-270 329-592 (592)
370 cd05610 STKc_MASTL Catalytic d 100.0 4.9E-30 1.1E-34 303.0 24.6 140 490-634 4-152 (669)
371 cd07857 STKc_MPK1 Catalytic do 100.0 5.1E-30 1.1E-34 279.5 22.6 261 491-763 1-294 (332)
372 KOG1035 eIF-2alpha kinase GCN2 100.0 4.7E-31 1E-35 303.2 14.8 247 487-760 476-870 (1351)
373 KOG0587 Traf2- and Nck-interac 100.0 1.6E-30 3.4E-35 290.5 18.2 257 481-761 10-282 (953)
374 cd07851 STKc_p38 Catalytic dom 100.0 2.4E-30 5.2E-35 283.4 19.2 259 488-762 13-299 (343)
375 KOG0671 LAMMER dual specificit 100.0 3E-31 6.6E-36 272.0 10.9 268 479-762 80-407 (415)
376 KOG0696 Serine/threonine prote 100.0 3.5E-31 7.7E-36 271.7 10.4 262 489-788 348-619 (683)
377 KOG0612 Rho-associated, coiled 100.0 3.4E-31 7.4E-36 302.0 10.5 256 479-761 64-338 (1317)
378 KOG0604 MAP kinase-activated p 100.0 9.4E-31 2E-35 259.5 11.4 251 488-764 59-325 (400)
379 PLN03225 Serine/threonine-prot 100.0 8.2E-30 1.8E-34 293.8 20.2 263 488-763 130-452 (566)
380 KOG0614 cGMP-dependent protein 100.0 1.8E-31 3.8E-36 280.5 4.8 237 490-754 420-665 (732)
381 KOG0603 Ribosomal protein S6 k 100.0 1.9E-30 4.1E-35 283.0 12.9 242 488-764 320-566 (612)
382 cd05576 STKc_RPK118_like Catal 100.0 9.8E-30 2.1E-34 263.5 17.3 218 501-756 4-224 (237)
383 PLN03224 probable serine/threo 100.0 3.3E-29 7.2E-34 281.7 22.1 263 488-763 143-502 (507)
384 KOG0662 Cyclin-dependent kinas 100.0 2.6E-30 5.5E-35 238.3 9.6 261 491-761 3-283 (292)
385 smart00220 S_TKc Serine/Threon 100.0 1.2E-28 2.6E-33 254.3 20.1 232 502-760 1-240 (244)
386 KOG0607 MAP kinase-interacting 100.0 9.9E-30 2.2E-34 253.9 11.3 259 480-763 73-363 (463)
387 KOG1006 Mitogen-activated prot 100.0 8.9E-31 1.9E-35 255.7 2.9 247 492-760 66-326 (361)
388 KOG1151 Tousled-like protein k 100.0 5E-30 1.1E-34 265.1 7.7 251 489-759 462-739 (775)
389 KOG0669 Cyclin T-dependent kin 100.0 2.1E-30 4.5E-35 251.0 3.7 262 492-763 19-317 (376)
390 KOG4236 Serine/threonine prote 100.0 1.1E-29 2.4E-34 267.5 9.4 242 495-763 569-821 (888)
391 KOG0695 Serine/threonine prote 100.0 1.2E-28 2.6E-33 247.0 13.0 245 489-754 249-503 (593)
392 KOG1027 Serine/threonine prote 100.0 2.3E-29 5E-34 279.9 8.7 243 492-760 511-766 (903)
393 KOG0668 Casein kinase II, alph 99.9 9.2E-28 2E-32 229.7 11.4 256 489-761 37-322 (338)
394 KOG0664 Nemo-like MAPK-related 99.9 1.2E-28 2.6E-33 241.0 4.8 260 492-763 55-345 (449)
395 KOG0608 Warts/lats-like serine 99.9 4.3E-27 9.4E-32 252.8 16.8 210 479-693 615-877 (1034)
396 KOG1290 Serine/threonine prote 99.9 1.9E-26 4.2E-31 242.6 19.7 269 489-764 77-553 (590)
397 KOG0984 Mitogen-activated prot 99.9 2.4E-27 5.3E-32 223.8 11.3 195 492-691 48-256 (282)
398 cd00180 PKc Catalytic domain o 99.9 6.5E-26 1.4E-30 228.0 21.0 205 498-761 1-214 (215)
399 KOG0665 Jun-N-terminal kinase 99.9 5.6E-26 1.2E-30 228.2 10.3 254 490-762 17-311 (369)
400 smart00221 STYKc Protein kinas 99.9 1.1E-24 2.3E-29 222.6 20.1 194 492-689 1-202 (225)
401 KOG0576 Mitogen-activated prot 99.9 3.9E-26 8.3E-31 248.0 5.8 247 489-760 14-270 (829)
402 KOG1152 Signal transduction se 99.9 2E-25 4.4E-30 238.6 10.5 191 490-688 561-770 (772)
403 KOG0670 U4/U6-associated splic 99.9 2E-25 4.4E-30 235.7 9.4 271 476-761 420-746 (752)
404 KOG1345 Serine/threonine kinas 99.9 4.6E-25 1E-29 216.3 10.4 238 490-752 24-275 (378)
405 KOG1167 Serine/threonine prote 99.9 7.6E-25 1.7E-29 228.3 10.0 269 485-761 31-381 (418)
406 smart00750 KIND kinase non-cat 99.9 1.2E-23 2.6E-28 207.2 15.0 168 566-766 1-170 (176)
407 PLN00181 protein SPA1-RELATED; 99.9 3.3E-24 7.3E-29 259.5 8.9 197 538-763 28-267 (793)
408 KOG0195 Integrin-linked kinase 99.9 8.9E-24 1.9E-28 207.0 8.0 243 495-765 195-446 (448)
409 PRK10783 mltD membrane-bound l 99.9 3.5E-23 7.5E-28 229.5 11.4 252 71-335 189-449 (456)
410 PRK09188 serine/threonine prot 99.9 2E-21 4.3E-26 210.0 16.1 160 488-661 16-194 (365)
411 KOG1164 Casein kinase (serine/ 99.8 3.6E-20 7.8E-25 200.6 20.7 256 491-768 19-300 (322)
412 COG0515 SPS1 Serine/threonine 99.8 1.3E-18 2.8E-23 186.9 24.8 256 492-761 2-275 (384)
413 KOG1165 Casein kinase (serine/ 99.8 3.1E-19 6.7E-24 180.3 18.2 255 490-764 28-298 (449)
414 KOG0590 Checkpoint kinase and 99.8 4E-20 8.6E-25 212.9 6.2 251 493-763 321-587 (601)
415 KOG1163 Casein kinase (serine/ 99.8 8E-19 1.7E-23 170.0 12.4 257 489-765 14-284 (341)
416 PRK10783 mltD membrane-bound l 99.8 9.4E-19 2E-23 194.2 14.4 168 14-187 261-448 (456)
417 PRK10359 lipopolysaccharide co 99.8 1.2E-18 2.6E-23 175.4 12.1 173 482-681 21-216 (232)
418 PRK12274 serine/threonine prot 99.8 5E-18 1.1E-22 167.1 16.0 184 493-691 5-211 (218)
419 cd05147 RIO1_euk RIO kinase fa 99.8 2.9E-18 6.3E-23 170.5 12.5 135 495-636 2-167 (190)
420 KOG1023 Natriuretic peptide re 99.8 2.5E-18 5.5E-23 189.0 12.1 218 536-768 1-227 (484)
421 cd05145 RIO1_like RIO kinase f 99.7 1.7E-17 3.8E-22 165.5 15.5 135 495-637 2-168 (190)
422 PF14531 Kinase-like: Kinase-l 99.7 2.3E-17 5.1E-22 171.0 14.1 227 491-752 13-288 (288)
423 KOG1240 Protein kinase contain 99.7 5.5E-18 1.2E-22 194.1 8.4 242 491-761 24-291 (1431)
424 KOG0603 Ribosomal protein S6 k 99.7 2.4E-18 5.2E-23 188.7 3.1 237 498-773 2-252 (612)
425 PRK10345 hypothetical protein; 99.7 4.3E-16 9.3E-21 156.5 14.1 132 493-633 5-156 (210)
426 KOG1166 Mitotic checkpoint ser 99.7 5.5E-16 1.2E-20 181.9 15.5 196 484-685 692-901 (974)
427 smart00090 RIO RIO-like kinase 99.7 7.3E-16 1.6E-20 158.6 12.8 146 482-636 20-198 (237)
428 PRK14879 serine/threonine prot 99.6 1.9E-15 4.1E-20 153.4 14.4 130 496-635 2-143 (211)
429 KOG4158 BRPK/PTEN-induced prot 99.6 1.5E-15 3.2E-20 157.0 12.6 181 556-764 318-513 (598)
430 cd05144 RIO2_C RIO kinase fami 99.6 3.1E-15 6.8E-20 150.3 14.0 141 483-637 8-176 (198)
431 PRK09605 bifunctional UGMP fam 99.6 2.7E-15 5.8E-20 173.6 14.0 134 489-636 332-477 (535)
432 TIGR03724 arch_bud32 Kae1-asso 99.6 3.9E-15 8.4E-20 149.7 13.0 126 497-635 1-138 (199)
433 KOG0606 Microtubule-associated 99.6 2E-15 4.4E-20 173.4 8.2 206 490-753 83-304 (1205)
434 KOG1033 eIF-2alpha kinase PEK/ 99.6 6E-16 1.3E-20 167.0 3.7 121 556-682 331-457 (516)
435 cd05120 APH_ChoK_like Aminogly 99.5 1.6E-13 3.5E-18 130.5 13.6 133 494-635 2-138 (155)
436 PRK01723 3-deoxy-D-manno-octul 99.5 4.5E-13 9.8E-18 138.2 14.5 131 495-635 36-191 (239)
437 cd05119 RIO RIO kinase family, 99.5 4.3E-13 9.3E-18 133.4 12.7 132 495-637 2-165 (187)
438 PRK13914 invasion associated s 99.4 5.6E-13 1.2E-17 144.9 10.9 218 16-273 27-247 (481)
439 KOG0590 Checkpoint kinase and 99.4 3.9E-14 8.4E-19 163.5 -1.8 249 491-760 21-285 (601)
440 PRK13914 invasion associated s 99.3 4.7E-12 1E-16 137.8 11.0 107 223-335 27-246 (481)
441 cd05151 ChoK Choline Kinase (C 99.3 1.8E-11 3.9E-16 119.5 11.3 129 495-635 3-136 (170)
442 TIGR01982 UbiB 2-polyprenylphe 99.3 2.8E-11 6.1E-16 135.7 13.4 136 495-637 122-308 (437)
443 KOG1266 Protein kinase [Signal 99.3 4.9E-12 1.1E-16 128.6 6.3 203 533-762 118-332 (458)
444 KOG0601 Cyclin-dependent kinas 99.1 8.8E-11 1.9E-15 129.8 5.9 242 491-760 115-378 (524)
445 PRK04750 ubiB putative ubiquin 99.0 1.8E-08 4E-13 114.4 20.2 139 490-637 120-315 (537)
446 PF01476 LysM: LysM domain; I 99.0 2.1E-10 4.5E-15 84.8 2.9 44 19-63 1-44 (44)
447 cd05146 RIO3_euk RIO kinase fa 99.0 8.8E-09 1.9E-13 101.8 14.5 133 495-637 2-175 (197)
448 PF01476 LysM: LysM domain; I 99.0 4.3E-10 9.3E-15 83.1 3.9 44 226-270 1-44 (44)
449 KOG1243 Protein kinase [Genera 99.0 1.1E-08 2.4E-13 114.3 16.0 159 513-683 37-199 (690)
450 cd05154 ACAD10_11_like Acyl-Co 99.0 9.4E-09 2E-13 104.9 14.0 137 496-635 4-206 (223)
451 KOG3087 Serine/threonine prote 98.9 1.3E-08 2.8E-13 96.5 13.2 139 494-635 11-165 (229)
452 COG3642 Mn2+-dependent serine/ 98.9 1.6E-08 3.4E-13 96.5 12.9 127 496-635 2-140 (204)
453 COG4248 Uncharacterized protei 98.9 5.7E-08 1.2E-12 102.6 17.8 270 493-772 14-307 (637)
454 PRK15123 lipopolysaccharide co 98.8 9.7E-08 2.1E-12 99.8 16.8 137 496-635 28-194 (268)
455 COG1388 LytE FOG: LysM repeat 98.8 5.9E-09 1.3E-13 96.2 6.8 93 30-126 1-112 (124)
456 COG1388 LytE FOG: LysM repeat 98.8 8.2E-09 1.8E-13 95.2 6.4 94 237-335 1-113 (124)
457 KOG0606 Microtubule-associated 98.8 1E-09 2.2E-14 127.2 -0.3 243 489-756 803-1084(1205)
458 KOG3741 Poly(A) ribonuclease s 98.8 1.3E-07 2.9E-12 102.5 15.1 163 504-687 290-476 (655)
459 KOG0601 Cyclin-dependent kinas 98.7 1.1E-08 2.4E-13 113.4 5.0 245 486-765 261-518 (524)
460 PRK09902 hypothetical protein; 98.6 4.9E-07 1.1E-11 89.6 13.9 135 497-635 25-179 (216)
461 PRK14125 cell division suppres 98.6 6.8E-08 1.5E-12 84.5 5.6 50 77-127 36-91 (103)
462 TIGR02899 spore_safA spore coa 98.6 6.5E-08 1.4E-12 71.2 4.8 44 21-64 1-44 (44)
463 PRK14125 cell division suppres 98.5 1E-07 2.2E-12 83.4 5.2 52 222-275 35-94 (103)
464 TIGR02899 spore_safA spore coa 98.5 1.3E-07 2.8E-12 69.6 4.2 44 228-271 1-44 (44)
465 PF01163 RIO1: RIO1 family; I 98.5 1.2E-06 2.5E-11 86.5 11.6 121 505-636 1-156 (188)
466 KOG2137 Protein kinase [Signal 98.4 1.1E-07 2.3E-12 107.1 2.2 150 591-760 107-264 (700)
467 PF06293 Kdo: Lipopolysacchari 98.4 3.4E-06 7.4E-11 85.1 12.3 105 527-636 56-171 (206)
468 COG0478 RIO-like serine/threon 98.3 3.3E-06 7.2E-11 85.6 11.3 131 492-635 93-251 (304)
469 TIGR02907 spore_VI_D stage VI 98.3 8.8E-07 1.9E-11 91.6 4.8 48 221-270 291-338 (338)
470 COG3858 Predicted glycosyl hyd 98.3 1.4E-06 3E-11 92.6 6.4 94 18-127 3-97 (423)
471 cd00118 LysM Lysin domain, fou 98.2 1.4E-06 3.1E-11 64.0 4.6 45 18-63 2-46 (46)
472 cd00118 LysM Lysin domain, fou 98.2 1.6E-06 3.5E-11 63.7 4.8 45 225-270 2-46 (46)
473 PRK10871 nlpD lipoprotein NlpD 98.2 1.3E-06 2.9E-11 91.6 4.5 48 17-65 61-108 (319)
474 PF01636 APH: Phosphotransfera 98.1 5.9E-05 1.3E-09 77.3 15.2 141 495-635 2-197 (239)
475 PRK10871 nlpD lipoprotein NlpD 98.1 2.4E-06 5.3E-11 89.7 4.5 48 224-272 61-108 (319)
476 PF06176 WaaY: Lipopolysacchar 98.1 8.2E-05 1.8E-09 74.2 15.0 133 488-634 29-182 (229)
477 TIGR02172 Fb_sc_TIGR02172 Fibr 98.1 5.2E-05 1.1E-09 77.6 14.1 137 496-635 7-182 (226)
478 COG3858 Predicted glycosyl hyd 98.1 3.3E-06 7.2E-11 89.8 5.3 94 225-335 3-97 (423)
479 TIGR02907 spore_VI_D stage VI 98.0 3.6E-06 7.9E-11 87.1 4.2 46 16-63 293-338 (338)
480 cd05150 APH Aminoglycoside 3'- 98.0 7.6E-05 1.6E-09 77.5 13.4 138 497-634 5-192 (244)
481 COG0661 AarF Predicted unusual 97.9 5.7E-05 1.2E-09 85.7 11.4 136 496-638 131-317 (517)
482 COG2112 Predicted Ser/Thr prot 97.9 9.8E-05 2.1E-09 70.4 10.6 128 494-635 26-155 (201)
483 PF12260 PIP49_C: Protein-kina 97.9 7.1E-05 1.5E-09 74.1 9.7 102 530-636 7-112 (188)
484 PRK11198 LysM domain/BON super 97.9 1.7E-05 3.6E-10 75.0 4.9 49 77-125 95-146 (147)
485 PRK11198 LysM domain/BON super 97.8 2E-05 4.4E-10 74.4 5.1 48 285-333 96-146 (147)
486 smart00257 LysM Lysin motif. 97.8 3.3E-05 7.2E-10 55.8 4.6 44 225-269 1-44 (44)
487 smart00257 LysM Lysin motif. 97.8 3.8E-05 8.2E-10 55.5 4.8 44 18-62 1-44 (44)
488 KOG0576 Mitogen-activated prot 97.7 4.1E-06 8.8E-11 93.4 -1.6 184 491-687 243-430 (829)
489 PLN02876 acyl-CoA dehydrogenas 97.7 0.00048 1E-08 84.1 16.1 74 495-568 43-131 (822)
490 PRK10593 hypothetical protein; 97.7 0.00058 1.3E-08 73.0 14.5 76 493-568 17-100 (297)
491 COG1718 RIO1 Serine/threonine 97.7 0.00087 1.9E-08 67.7 14.6 148 480-637 35-217 (268)
492 cd05155 APH_ChoK_like_1 Unchar 97.6 0.00057 1.2E-08 70.5 11.8 71 496-569 3-82 (235)
493 PF13095 FTA2: Kinetochore Sim 97.6 0.00066 1.4E-08 67.1 11.4 121 490-633 37-206 (207)
494 TIGR02721 ycfN_thiK thiamine k 97.5 0.0009 2E-08 70.0 11.7 134 498-635 4-175 (256)
495 PF10707 YrbL-PhoP_reg: PhoP r 97.4 0.0042 9.2E-08 61.8 15.1 129 494-633 5-170 (199)
496 cd05157 ETNK_euk Ethanolamine 97.4 0.0032 6.9E-08 64.8 13.9 72 495-569 3-80 (235)
497 KOG1035 eIF-2alpha kinase GCN2 97.3 0.00069 1.5E-08 81.1 9.4 198 528-764 228-437 (1351)
498 cd05153 HomoserineK_II Homoser 97.2 0.0022 4.7E-08 68.7 11.4 141 495-635 19-205 (296)
499 KOG1235 Predicted unusual prot 97.2 0.0022 4.8E-08 72.7 11.8 134 495-637 166-356 (538)
500 PRK05231 homoserine kinase; Pr 97.0 0.015 3.2E-07 62.9 15.3 155 481-635 8-217 (319)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-51 Score=445.24 Aligned_cols=286 Identities=46% Similarity=0.809 Sum_probs=245.7
Q ss_pred cccccCHHHHHHHhcCcccceeeeecCceEEEEEEECC-ceEEEEEeChhh---HHHHHHHHHHHHhcCCCCCcceEEEE
Q 046083 476 KSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELRG-EKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVRLIGYC 551 (790)
Q Consensus 476 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~g-~~vavK~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~ 551 (790)
....|++.++..+|++|...+.||+|+||.||+|.+.+ ..+|||++.... .++|.+|++++.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 34579999999999999999999999999999999985 899999987543 56799999999999999999999999
Q ss_pred ecCe--EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEE
Q 046083 552 VEGS--LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVAD 629 (790)
Q Consensus 552 ~~~~--~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~D 629 (790)
.+.+ .+||||||++|+|.++|+.....+++|..|++|+.++|+||+|||+...|+||||||||+|||||+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 8653 89999999999999999986533789999999999999999999999988999999999999999999999999
Q ss_pred eCCCcccccCCccccccc-ccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHH
Q 046083 630 FGLAKLTEVGSASVHTRL-VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVL 708 (790)
Q Consensus 630 fGla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
||+|+..... ....... .||.+|+|||+...+..+.|+|||||||+|+||+||+++...... .....+..|....+
T Consensus 221 FGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~--~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 221 FGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRP--RGELSLVEWAKPLL 297 (361)
T ss_pred ccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCC--cccccHHHHHHHHH
Confidence 9999765431 1111112 799999999999999999999999999999999999988865432 12233566665555
Q ss_pred cCCCChhhhhhhcCCcCC-CCCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccC
Q 046083 709 RQPDPREDLQRLVDPRLG-DDYPI-DSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768 (790)
Q Consensus 709 ~~~~~~~~l~~~~d~~l~-~~~~~-~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~ 768 (790)
... .+.+++|+.+. ..++. ++..++..++.+|++.+|.+||+|.||++.|..+...
T Consensus 298 ~~~----~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 298 EEG----KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HCc----chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 443 78899999987 66664 6888999999999999999999999999999665543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=395.45 Aligned_cols=251 Identities=33% Similarity=0.553 Sum_probs=213.4
Q ss_pred ccceeeeecCceEEEEEEECCce-EEEEEeChhh-----HHHHHHHHHHHHhcCCCCCcceEEEEecCe--EEEEEEEec
Q 046083 493 SMGNKIGQGGFGAVFYAELRGEK-AAIKKMDMQA-----SKEFLAELKVLTHVHHLNLVRLIGYCVEGS--LFLVYEYIE 564 (790)
Q Consensus 493 ~~~~~lG~G~fg~Vy~a~~~g~~-vavK~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~g~~~~~~--~~lv~e~~~ 564 (790)
.+.+.||+|+||+||+|.+.|.. +|||++.... .++|.+|+.+|.+++|||||+++|+|.+.. +++|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 34566999999999999999988 9999997533 568999999999999999999999999764 899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC-cEEEEEeCCCcccccCCccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~-~~kl~DfGla~~~~~~~~~~ 643 (790)
+|+|.++++...+..+++..+++++.+||+||.|||+++. ||||||||+|||++.++ ++||+|||+++...... ..
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~ 200 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-TS 200 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc-cc
Confidence 9999999988545679999999999999999999999992 39999999999999998 99999999998765332 22
Q ss_pred ccccccCCCccchhccc--CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 644 HTRLVGTFGYMPPEYAQ--YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~--~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
.+...||+.|||||++. ...++.|+||||||++||||+||+.||..... ... ...++
T Consensus 201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--------~~~-------------~~~v~ 259 (362)
T KOG0192|consen 201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--------VQV-------------ASAVV 259 (362)
T ss_pred ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--------HHH-------------HHHHH
Confidence 33468999999999999 56899999999999999999999999976432 111 11222
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
....+...+..++..+..++.+||+.||..||++.|++..|..+..
T Consensus 260 ~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 260 VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 2334445565677889999999999999999999999999998755
No 3
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9e-45 Score=388.98 Aligned_cols=259 Identities=29% Similarity=0.512 Sum_probs=220.7
Q ss_pred cccCHHHHHHHhcCcccceeeeecCceEEEEEEECCc-eEEEEEeCh--hhHHHHHHHHHHHHhcCCCCCcceEEEEecC
Q 046083 478 VEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELRGE-KAAIKKMDM--QASKEFLAELKVLTHVHHLNLVRLIGYCVEG 554 (790)
Q Consensus 478 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~g~-~vavK~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~ 554 (790)
..+..+++ .+.+.||+|.||.||.|.+++. .+|+|.++. ...++|.+|+++|++++|+|||+++|+|.++
T Consensus 201 wei~r~~l-------~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~ 273 (468)
T KOG0197|consen 201 WEIPREEL-------KLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ 273 (468)
T ss_pred eeecHHHH-------HHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence 45555555 4578999999999999999966 999999975 3447899999999999999999999999975
Q ss_pred e-EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 555 S-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 555 ~-~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
+ +|||||||+.|+|.++|+...+..+...+.+.++.|||+|++||+++++ |||||.++||||+++..+||+|||||
T Consensus 274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~---IHRDLAARNiLV~~~~~vKIsDFGLA 350 (468)
T KOG0197|consen 274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNY---IHRDLAARNILVDEDLVVKISDFGLA 350 (468)
T ss_pred CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCc---cchhhhhhheeeccCceEEEcccccc
Confidence 5 9999999999999999998666789999999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCC
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
+..............-+..|.|||.+..+.++.|||||||||+||||+| |+.|+.....
T Consensus 351 r~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-------------------- 410 (468)
T KOG0197|consen 351 RLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-------------------- 410 (468)
T ss_pred cccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH--------------------
Confidence 9654433333334455789999999999999999999999999999998 6666543221
Q ss_pred ChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccC
Q 046083 713 PREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768 (790)
Q Consensus 713 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~ 768 (790)
..+-+.++...+-..|..++..+.+||..||+.+|++|||++.+...|..+...
T Consensus 411 --~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 411 --EEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred --HHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 233345555556667888999999999999999999999999999998877554
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-44 Score=367.18 Aligned_cols=255 Identities=26% Similarity=0.448 Sum_probs=214.1
Q ss_pred ccceeeeecCceEEEEEEEC--CceEEEEEe----ChhhHHHHHHHHHHHHhcCCCCCcceEEEEe-cC-eEEEEEEEec
Q 046083 493 SMGNKIGQGGFGAVFYAELR--GEKAAIKKM----DMQASKEFLAELKVLTHVHHLNLVRLIGYCV-EG-SLFLVYEYIE 564 (790)
Q Consensus 493 ~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~----~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~-~~~lv~e~~~ 564 (790)
+..+.||+|..|+||++.++ +..+|+|.+ +....+++.+|++++++.+||+||.+||.|. ++ +..++||||+
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 44789999999999999987 788999999 3455678999999999999999999999776 55 4999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
+|+|++++...+ .+++....+++.+|++||.|||+ +++ |||||||+|||++..|++||||||.+..+... .
T Consensus 162 gGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~~I---IHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~ 233 (364)
T KOG0581|consen 162 GGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEERKI---IHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---I 233 (364)
T ss_pred CCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhccCe---eeccCCHHHeeeccCCCEEeccccccHHhhhh---h
Confidence 999999998764 48999999999999999999996 776 99999999999999999999999999876533 4
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
...++||..|||||.+++..|+.++||||||+.++|+.+|+.|+....+ ...+...+...+...+.+
T Consensus 234 a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~---~~~~~~~Ll~~Iv~~ppP---------- 300 (364)
T KOG0581|consen 234 ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNP---PYLDIFELLCAIVDEPPP---------- 300 (364)
T ss_pred cccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCC---CCCCHHHHHHHHhcCCCC----------
Confidence 4568899999999999999999999999999999999999999865421 123444555555543322
Q ss_pred cCCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccC
Q 046083 724 RLGDDYPID-SVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDW 772 (790)
Q Consensus 724 ~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~ 772 (790)
..|.+ ...++..++..||++||.+||+++|++++-.-......+-
T Consensus 301 ----~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~~~v 346 (364)
T KOG0581|consen 301 ----RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFEDPNV 346 (364)
T ss_pred ----CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcccccc
Confidence 22332 5678999999999999999999999999776554444433
No 5
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.8e-43 Score=391.61 Aligned_cols=257 Identities=32% Similarity=0.564 Sum_probs=214.6
Q ss_pred hcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecCe-E
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGS-L 556 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~ 556 (790)
+.+....+.||+|.||.||+|+.. ...||||.++.. ...+|++|++++..++|||||+|+|+|.+++ +
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 445667889999999999999864 346999999742 4578999999999999999999999999776 8
Q ss_pred EEEEEEecCCChhhhhhcCC--------CC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCc
Q 046083 557 FLVYEYIENGNLNQHLRGSG--------KD----TLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFR 624 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~--------~~----~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~ 624 (790)
++|+|||..|||.+||+... .+ +|+..+.+.|+.|||.|++||.++.. |||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~F---VHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHF---VHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcc---cccchhhhhceeccceE
Confidence 99999999999999998532 12 38999999999999999999999997 99999999999999999
Q ss_pred EEEEEeCCCcccccCCccccc-ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHH
Q 046083 625 AKVADFGLAKLTEVGSASVHT-RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVA 702 (790)
Q Consensus 625 ~kl~DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 702 (790)
+||+||||++.....+..... ...-..+||+||.++.++||++||||||||+|||++| |+.|+.....
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn---------- 711 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN---------- 711 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch----------
Confidence 999999999965433322222 3344779999999999999999999999999999998 7777654332
Q ss_pred HHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCc
Q 046083 703 LFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770 (790)
Q Consensus 703 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~ 770 (790)
.+.++.+-+..+ -..|++++.++.+||..||+.+|.+||+++||-..|+.....++
T Consensus 712 -----------~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 712 -----------QEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred -----------HHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 122333333344 56788999999999999999999999999999999998766554
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-42 Score=355.52 Aligned_cols=196 Identities=30% Similarity=0.562 Sum_probs=176.0
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
..+|...+.||+|.||+||+|+.+ +..||||.+... ..+-+..|+.+|++++|||||.+++++..+ .+||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 356888899999999999999986 889999998654 456688999999999999999999999854 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC------CcEEEEEeCCCc
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN------FRAKVADFGLAK 634 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~------~~~kl~DfGla~ 634 (790)
|||.+|+|.+|++..+ .+++.....++.|++.||++||++++ |||||||+||||+.. -.+||+|||+|+
T Consensus 89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~I---iHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNI---IHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999999999875 59999999999999999999999998 999999999999765 468999999999
Q ss_pred ccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccc
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTN 691 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~ 691 (790)
.+.. .......+|++-|||||+++..+|+.|+|+||+|+++|||++|+.||....
T Consensus 164 ~L~~--~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 164 FLQP--GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hCCc--hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 8763 334456899999999999999999999999999999999999999997543
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-41 Score=368.35 Aligned_cols=246 Identities=24% Similarity=0.448 Sum_probs=210.0
Q ss_pred cCcccceeeeecCceEEEEEEE-C-CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAEL-R-GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~-~-g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
.+|...+.||+|||+.||.++. . |+.+|+|++.. ...+...+|++|.++++|||||++++|+++. ..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688999999999999999998 3 99999999864 4557789999999999999999999999976 489999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
|+|.+++|..++.. +.++++.+++.+..||+.||.|||+++| +|||||..|+||+++.++||+|||||..+....
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~I---iHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSLGI---IHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhcCc---eecccchhheeecCcCcEEecccceeeeecCcc
Confidence 99999999999984 3479999999999999999999999998 999999999999999999999999999876432
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
+.....+|||.|.|||++.....+..+||||+||+||-||.|++||.... +......+...
T Consensus 173 -Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--------vkety~~Ik~~---------- 233 (592)
T KOG0575|consen 173 -ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--------VKETYNKIKLN---------- 233 (592)
T ss_pred -cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch--------HHHHHHHHHhc----------
Confidence 34556899999999999999999999999999999999999999996532 21222222111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
. -.+|.....+..+||.++|+.||.+|||+++|+.+=..
T Consensus 234 ---~--Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 234 ---E--YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred ---C--cccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 1 12244566678899999999999999999999986543
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-42 Score=350.13 Aligned_cols=263 Identities=25% Similarity=0.431 Sum_probs=214.6
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLV 559 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv 559 (790)
.++|++.+.||+|+||.||.++.+ ++.+|+|++++. ..+...+|..+|.+++||+||+++--+. .+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 467999999999999999999876 889999998743 3456889999999999999999975554 5679999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
+||+.||.|..+|.+.+ .+++..+.-++.+|+.||.|||+++| |||||||+|||||++|+++|+|||+++.....
T Consensus 104 ld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gI---iyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGI---IYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCe---eeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 99999999999999866 48999999999999999999999998 99999999999999999999999999954332
Q ss_pred CcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
. ......+||+.|||||++.+..++..+|+||+|+++|||++|.+||...+. ..+.+.+....
T Consensus 179 ~-~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~--------~~~~~~I~~~k-------- 241 (357)
T KOG0598|consen 179 G-DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV--------KKMYDKILKGK-------- 241 (357)
T ss_pred C-CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH--------HHHHHHHhcCc--------
Confidence 2 233447999999999999999999999999999999999999999965432 22333333321
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCCcCCccccccccccccC
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSFYENQGLDSLMSG 789 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~ 789 (790)
+ ...+.-...+..+++...++.||++|-- ......+...+.|+.+-+|+++..+
T Consensus 242 -----~-~~~p~~ls~~ardll~~LL~rdp~~RLg----------~~~d~~~ik~HpfF~~inW~~l~~k 295 (357)
T KOG0598|consen 242 -----L-PLPPGYLSEEARDLLKKLLKRDPRQRLG----------GPGDAEEIKRHPFFKGINWEKLLAK 295 (357)
T ss_pred -----C-CCCCccCCHHHHHHHHHHhccCHHHhcC----------CCCChHHhhcCcccccCCHHHHHhc
Confidence 1 1122224567889999999999999964 2223334677788888888887654
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-42 Score=339.48 Aligned_cols=250 Identities=27% Similarity=0.454 Sum_probs=203.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEe--cCe-EEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCV--EGS-LFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~-~~lv 559 (790)
.+|.+.++||+|.||.||++... |..+|.|.++. ....++..|+.+|++++|||||+.+++.. +.+ +++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 45788999999999999999764 88999998863 34567899999999999999999998443 444 8999
Q ss_pred EEEecCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCc--eeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 560 YEYIENGNLNQHLRG--SGKDTLTWSARMQIALDSARGLEYIHEHTVPV--YIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~--~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
|||++.|+|...+.. ..+..++++.+|+++.|+++||.++|+. +++ ++||||||.||+|+.+|.+||+|||+++.
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999875 3456799999999999999999999992 233 79999999999999999999999999998
Q ss_pred cccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 636 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
+... .......+|||.||+||.+....|+.||||||+||++|||..=++||... .+..+...+-..
T Consensus 178 l~s~-~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--------n~~~L~~KI~qg----- 243 (375)
T KOG0591|consen 178 LSSK-TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--------NLLSLCKKIEQG----- 243 (375)
T ss_pred hcch-hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--------cHHHHHHHHHcC-----
Confidence 7543 33445689999999999999999999999999999999999999998653 222222222211
Q ss_pred hhhhhcCCcCCCCCC-HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 716 DLQRLVDPRLGDDYP-IDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~-~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
--...| .-.+..+.+|+..|+..||+.||+.-.+++.+.
T Consensus 244 ---------d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 244 ---------DYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred ---------CCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 111223 456778999999999999999999655555444
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.1e-42 Score=351.53 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=203.2
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh----------HHHHHHHHHHHHhcCCCCCcceEEEEecCe-
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA----------SKEFLAELKVLTHVHHLNLVRLIGYCVEGS- 555 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~----------~~~~~~E~~~l~~l~h~niv~l~g~~~~~~- 555 (790)
.+.|.+.+.||+|+||.|-+|..+ |+.||||.++... .....+|+++|++++|||||++++++.+.+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 356888999999999999999876 8999999986421 123569999999999999999999998654
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC---CcEEEEEeCC
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN---FRAKVADFGL 632 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~---~~~kl~DfGl 632 (790)
.|+||||++||+|.+.+-.++ .+.+.....++.|++.|+.|||++|+ +||||||+|||+..+ ..+||+|||+
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI---~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGI---IHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred eEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCc---ccccCCcceEEeccCCcceEEEecccch
Confidence 799999999999999998765 37777788899999999999999999 999999999999765 7899999999
Q ss_pred CcccccCCcccccccccCCCccchhcccCCC--C-CchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHc
Q 046083 633 AKLTEVGSASVHTRLVGTFGYMPPEYAQYGE--V-SPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709 (790)
Q Consensus 633 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~-s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
|+... ........+||+.|.|||++.... + ..+.|+||+||+||-+++|.+||....... .+.+.+..
T Consensus 326 AK~~g--~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-------sl~eQI~~ 396 (475)
T KOG0615|consen 326 AKVSG--EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-------SLKEQILK 396 (475)
T ss_pred hhccc--cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-------cHHHHHhc
Confidence 99765 445567789999999999997654 2 348899999999999999999997543321 12222222
Q ss_pred CCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 710 QPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 710 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
..... ....-.+..++..+|+.+||..||++|||++|++++-|.
T Consensus 397 G~y~f-----------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~ 440 (475)
T KOG0615|consen 397 GRYAF-----------GPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWF 440 (475)
T ss_pred Ccccc-----------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhh
Confidence 11110 011123566788999999999999999999999987774
No 11
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-42 Score=373.86 Aligned_cols=257 Identities=27% Similarity=0.499 Sum_probs=219.5
Q ss_pred CcccceeeeecCceEEEEEEEC--C---ceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecCe-EEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--G---EKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEGS-LFLVY 560 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g---~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~~lv~ 560 (790)
...+.+.||.|.||.||+|+++ + ..||||.++. +...+|..|..||.++.||||++|.|+..... .++|.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 4578899999999999999986 3 4699999984 45578999999999999999999999998765 78999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
|||++|+|+.||+.+.. .+++.+..-+.++|+.|+.||.+.+. |||||.++|||++.+..+|++|||+++.++...
T Consensus 710 EyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~Y---VHRDLAARNILVNsnLvCKVsDFGLSRvledd~ 785 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 785 (996)
T ss_pred hhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCc---hhhhhhhhheeeccceEEEeccccceeecccCC
Confidence 99999999999998765 49999999999999999999999998 999999999999999999999999999876554
Q ss_pred ccccccccc--CCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 641 ASVHTRLVG--TFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 641 ~~~~~~~~g--t~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
....+...| ..+|.|||.+...+++.+|||||||++|||.++ |.+|+..... .+.
T Consensus 786 ~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN----------------------QdV 843 (996)
T KOG0196|consen 786 EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN----------------------QDV 843 (996)
T ss_pred CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch----------------------HHH
Confidence 322222222 568999999999999999999999999999886 8888755432 122
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCC
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWD 773 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~ 773 (790)
-+.++...+-.-|++++..|.+||..||++|-.+||++.+|+..|.++...+...+
T Consensus 844 IkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk 899 (996)
T KOG0196|consen 844 IKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLK 899 (996)
T ss_pred HHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhc
Confidence 23344455556688999999999999999999999999999999999877666543
No 12
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-40 Score=342.87 Aligned_cols=254 Identities=26% Similarity=0.443 Sum_probs=206.8
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh---HHHHHHHHHHHHhcCCCCCcceEEEEe--cC-eEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVRLIGYCV--EG-SLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~--~~-~~~lv~e 561 (790)
.++...+.||+|.||+||++... |+..|||.+.... .+.+.+|+.+|++++|||||+.+|... ++ .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45667899999999999999986 6999999987654 556899999999999999999999743 33 5899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC-CCcEEEEEeCCCccccc--
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK-NFRAKVADFGLAKLTEV-- 638 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~-~~~~kl~DfGla~~~~~-- 638 (790)
|+++|+|.+++...+. .+++..+.++..++++||.|||++++ +||||||+|||++. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~---vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGI---VHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCE---eccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999998776 79999999999999999999999998 99999999999999 79999999999987653
Q ss_pred CCcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
..........||+.|||||++..+ ....++|||||||++.||+||..||.... ........+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~-------~~~~~~~~i---------- 235 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF-------EEAEALLLI---------- 235 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc-------chHHHHHHH----------
Confidence 111223347899999999999953 34459999999999999999999986520 011111111
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
.... ..+.+|...+.+..+++..|++.+|++|||+++++++......
T Consensus 236 --g~~~-~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 236 --GRED-SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred --hccC-CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 1111 1124566677789999999999999999999999998775443
No 13
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-40 Score=349.12 Aligned_cols=249 Identities=29% Similarity=0.474 Sum_probs=209.6
Q ss_pred cccCHHHHHHHhcCcccceeeeecCceEEEEEEECCceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEecCe-E
Q 046083 478 VEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGS-L 556 (790)
Q Consensus 478 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~-~ 556 (790)
+++.|+++. .++.||.|..|.||+|++.++.||||+++... ..+++-|++++|+||+.|.|+|.+.. +
T Consensus 119 WeiPFe~Is-------ELeWlGSGaQGAVF~Grl~netVAVKKV~elk----ETdIKHLRkLkH~NII~FkGVCtqsPcy 187 (904)
T KOG4721|consen 119 WEIPFEEIS-------ELEWLGSGAQGAVFLGRLHNETVAVKKVRELK----ETDIKHLRKLKHPNIITFKGVCTQSPCY 187 (904)
T ss_pred ccCCHHHhh-------hhhhhccCcccceeeeeccCceehhHHHhhhh----hhhHHHHHhccCcceeeEeeeecCCcee
Confidence 566677764 36899999999999999999999999986432 24688999999999999999999765 7
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
|+|||||..|.|...|+... .+.-.....+..+||.|+.|||.+.+ ||||||+-||||..+..+||+|||-++..
T Consensus 188 CIiMEfCa~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKI---IHRDLKSPNiLIs~~d~VKIsDFGTS~e~ 262 (904)
T KOG4721|consen 188 CIIMEFCAQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKI---IHRDLKSPNILISYDDVVKISDFGTSKEL 262 (904)
T ss_pred EEeeeccccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhH---hhhccCCCceEeeccceEEeccccchHhh
Confidence 89999999999999998754 57788889999999999999999998 99999999999999999999999999866
Q ss_pred ccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 637 EVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 637 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
... .....+.||..|||||++.+...++|.|||||||||||||||.-|+...+... -+|...
T Consensus 263 ~~~--STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA-----------IIwGVG----- 324 (904)
T KOG4721|consen 263 SDK--STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA-----------IIWGVG----- 324 (904)
T ss_pred hhh--hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe-----------eEEecc-----
Confidence 433 22345789999999999999999999999999999999999999986644311 011111
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
...|.-..|..++.-|.-|+++||+..|.+||++++++.+|...
T Consensus 325 -----sNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 325 -----SNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred -----CCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 11233345667778899999999999999999999999999864
No 14
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=331.43 Aligned_cols=257 Identities=24% Similarity=0.366 Sum_probs=206.6
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYE 561 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e 561 (790)
.++|++.+.||.|..++||+|+.. ++.||||+++.+ ..+.+.+|+..|+.++||||++.+..|. +.++|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 467899999999999999999875 899999999853 3467899999999999999999998766 667999999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
||.+|++.+.+...-+..+++..+.-|.+++++||.|||.+|. ||||||+.||||+.+|.+||+|||.+..+.....
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~---IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGH---IHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCc---eecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 9999999999987666679999999999999999999999998 9999999999999999999999998876654432
Q ss_pred ccc---cccccCCCccchhcccC--CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 642 SVH---TRLVGTFGYMPPEYAQY--GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 642 ~~~---~~~~gt~~y~aPE~~~~--~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
... ....|+++|||||+++. ..|+.|+||||||+..+||.+|+.||....+. ..+...+-..++...
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-------kvLl~tLqn~pp~~~- 253 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-------KVLLLTLQNDPPTLL- 253 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-------HHHHHHhcCCCCCcc-
Confidence 221 34689999999999643 46999999999999999999999999765442 111222222221111
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
-...+. +-.......+.+++..||+.||++|||+++++.+
T Consensus 254 -t~~~~~----d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 254 -TSGLDK----DEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred -cccCCh----HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 111111 1112233478999999999999999999998753
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-39 Score=342.53 Aligned_cols=249 Identities=29% Similarity=0.482 Sum_probs=209.9
Q ss_pred HHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhH------HHHHHHHHHHHhc-CCCCCcceEEEEec-Ce
Q 046083 486 AKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS------KEFLAELKVLTHV-HHLNLVRLIGYCVE-GS 555 (790)
Q Consensus 486 ~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~------~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~ 555 (790)
.+..++|.+++.||+|+|++|++|+.. +..+|||++.++.. +-...|-+.|.+| .||.|++||-.+.+ ..
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 556789999999999999999999886 88999999875432 3367788999999 89999999987765 46
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
+|+|+||+++|+|.++|.+.+ .|++.....++.+|+.||+|||++|| |||||||+|||||+|+++||+|||.|+.
T Consensus 149 LYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GI---IHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGI---IHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCc---eeccCChhheeEcCCCcEEEeecccccc
Confidence 999999999999999999876 59999999999999999999999998 9999999999999999999999999997
Q ss_pred cccCCcc------------cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHH
Q 046083 636 TEVGSAS------------VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703 (790)
Q Consensus 636 ~~~~~~~------------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 703 (790)
+...... ....++||..|.+||++.....+..+|+|+|||+||+|+.|++||...++ ...
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne--------yli 295 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE--------YLI 295 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH--------HHH
Confidence 7543211 11347999999999999999999999999999999999999999977543 223
Q ss_pred HHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 704 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
++.++.- .-++|...++.+.+|+.+.|..||.+|+|..+|-++.
T Consensus 296 FqkI~~l---------------~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 296 FQKIQAL---------------DYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred HHHHHHh---------------cccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 3333321 1234555557788999999999999999998887653
No 16
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-39 Score=317.85 Aligned_cols=259 Identities=28% Similarity=0.457 Sum_probs=217.3
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++|+..+.||.|+||+|..++.+ |..+|+|.++.+ ..+...+|.++|+.+.||+++++++.+.+. .+|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 56888999999999999999886 889999999753 345678999999999999999999877754 599999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||++||.|..+|++.+ .++.+.+..++.+|+.||+|||+.++ ++|||||+|||+|.+|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~i---iYRDLKPENiLlD~~G~iKitDFGFAK~v~~-- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDI---IYRDLKPENLLLDQNGHIKITDFGFAKRVSG-- 196 (355)
T ss_pred eccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCe---eeccCChHHeeeccCCcEEEEeccceEEecC--
Confidence 9999999999999876 49999999999999999999999998 9999999999999999999999999997642
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.....+|||.|+|||.++...+..++|+|+|||++|||+.|.+||....+ ... .+++
T Consensus 197 --rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~i-------------Y~KI 253 (355)
T KOG0616|consen 197 --RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQI-------------YEKI 253 (355)
T ss_pred --cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHH-------------HHHH
Confidence 23458999999999999999999999999999999999999999976443 122 2333
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCCcCCccccccccccccC
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSFYENQGLDSLMSG 789 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~ 789 (790)
+...+ .+|.-...++.+|+...++.|-.+| +-.+..-..+...+.||.+-+|..+.+.
T Consensus 254 ~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R---------~gnlknG~~dIk~H~wF~~v~W~~i~~r 311 (355)
T KOG0616|consen 254 LEGKV--KFPSYFSSDAKDLLKKLLQVDLTKR---------FGNLKNGVEDIKNHPWFKGVDWEAILQR 311 (355)
T ss_pred HhCcc--cCCcccCHHHHHHHHHHHhhhhHhh---------hcCcCCCccccccCcccccccHHHHhhc
Confidence 33333 3455566778899999999998888 3344445566677777777777776654
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.7e-39 Score=322.02 Aligned_cols=259 Identities=26% Similarity=0.385 Sum_probs=200.3
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e 561 (790)
+.|+...++|+|+||+||+++.+ |+.||||++... ..+-..+|+++|++++|+|+|.++.+|. ...++||||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45777899999999999999886 899999999632 2345789999999999999999999887 556999999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|++. ++.+-|.... ..++.....+++.|++.|+.|+|++++ |||||||+|||++.++.+||||||+|+.+.. ..
T Consensus 82 ~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~---IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pg 155 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNNC---IHRDIKPENILITQNGVVKLCDFGFARTLSA-PG 155 (396)
T ss_pred ecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcCe---ecccCChhheEEecCCcEEeccchhhHhhcC-Cc
Confidence 9998 4445554432 358889999999999999999999998 9999999999999999999999999998764 44
Q ss_pred ccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh------
Q 046083 642 SVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR------ 714 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 714 (790)
...+..+.|.+|+|||.+-+ .+|....|||++||++.||++|.+.|...++. +..-.....+....++
T Consensus 156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDi-----DQLy~I~ktLG~L~prhq~iF~ 230 (396)
T KOG0593|consen 156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDI-----DQLYLIRKTLGNLIPRHQSIFS 230 (396)
T ss_pred chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchH-----HHHHHHHHHHcccCHHHHHHhc
Confidence 55667888999999999987 68999999999999999999999888654431 1111111112111110
Q ss_pred --hhhhhhcCCcCC------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 715 --EDLQRLVDPRLG------DDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 715 --~~l~~~~d~~l~------~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
..+..+.-|... ..+ +....-+.+++..|++.||.+|++.++++.
T Consensus 231 ~N~~F~Gv~lP~~~~~epLe~k~-p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 231 SNPFFHGVRLPEPEHPEPLERKY-PKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred cCCceeeeecCCCCCccchhhhc-ccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 011111111111 111 234457889999999999999999999875
No 18
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1e-38 Score=348.88 Aligned_cols=256 Identities=30% Similarity=0.493 Sum_probs=202.2
Q ss_pred HhcCcccceeeeecCceEEEEEEEC-------CceEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEec--
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVE-- 553 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-- 553 (790)
..++|++.+.||+|+||.||+|... +..||+|.++. ...+.+.+|++++.++ +||||++++++|.+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 3567999999999999999999742 45799999864 2345688999999999 89999999998874
Q ss_pred CeEEEEEEEecCCChhhhhhcCC---------------------------------------------------------
Q 046083 554 GSLFLVYEYIENGNLNQHLRGSG--------------------------------------------------------- 576 (790)
Q Consensus 554 ~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------------- 576 (790)
+..+++|||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 34899999999999999987531
Q ss_pred ---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc-cccccccCCC
Q 046083 577 ---KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFG 652 (790)
Q Consensus 577 ---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~ 652 (790)
...+++..+.+++.|+++||+|||++++ +||||||+|||++.++.+||+|||+++........ ......++..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---vHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCCE---ECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 1348889999999999999999999997 99999999999999999999999999865322211 1122345678
Q ss_pred ccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCH
Q 046083 653 YMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPI 731 (790)
Q Consensus 653 y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~ 731 (790)
|+|||++.+..++.++|||||||++|||++ |..||...... ..+...+... . ....+.
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--------~~~~~~~~~~------------~-~~~~~~ 300 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--------EEFCQRLKDG------------T-RMRAPE 300 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--------HHHHHHHhcC------------C-CCCCCC
Confidence 999999998899999999999999999997 99998643211 0011111110 0 011123
Q ss_pred HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 732 DSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 732 ~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
..+..+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 301 ~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 301 NATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 345678999999999999999999999999998654
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=340.66 Aligned_cols=261 Identities=31% Similarity=0.451 Sum_probs=208.3
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh--hHHH--HHHHHHHHHhcC-CCCCcceEEEEecC--eEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--ASKE--FLAELKVLTHVH-HLNLVRLIGYCVEG--SLFLV 559 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~--~~~~--~~~E~~~l~~l~-h~niv~l~g~~~~~--~~~lv 559 (790)
-++|...++||.|.||.||+|+.. ++.||||+++.. ..++ -.+|+..|++++ ||||+++.+++.+. .+|+|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 357888999999999999999875 889999999753 3344 367999999998 99999999988754 58999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
||||+. +|++++..+ ...+++..+..|+.||++||+|+|.+|. .|||+||+|||+..+..+||+|||+||.....
T Consensus 89 fE~Md~-NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~Gf---FHRDlKPENiLi~~~~~iKiaDFGLARev~Sk 163 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGF---FHRDLKPENILISGNDVIKIADFGLAREVRSK 163 (538)
T ss_pred HHhhhh-hHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCc---ccccCChhheEecccceeEecccccccccccC
Confidence 999987 999999987 5689999999999999999999999998 99999999999999999999999999976543
Q ss_pred CcccccccccCCCccchhccc-CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh---
Q 046083 640 SASVHTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE--- 715 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 715 (790)
...+..+.|.+|+|||++. .+.|+.+.|+|++|||++|+.+=++.|...++. +..--..+++..+....
T Consensus 164 --pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~-----Dqi~KIc~VLGtP~~~~~~e 236 (538)
T KOG0661|consen 164 --PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEI-----DQIYKICEVLGTPDKDSWPE 236 (538)
T ss_pred --CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHH-----HHHHHHHHHhCCCccccchh
Confidence 3346678899999999874 567999999999999999999988888665442 11122233444333221
Q ss_pred --hhhhhcCCcC--------CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 716 --DLQRLVDPRL--------GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 716 --~l~~~~d~~l--------~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
.+...+.-.+ ..-.+ ....+..+|+.+|+++||.+|||+.|.+++-
T Consensus 237 g~~La~~mnf~~P~~~~~~l~~L~p-~~s~~~~~li~~ll~WDP~kRpTA~~al~~p 292 (538)
T KOG0661|consen 237 GYNLASAMNFRFPQVKPSPLKDLLP-NASSEAASLIERLLAWDPDKRPTASQALQHP 292 (538)
T ss_pred HHHHHHHhccCCCcCCCCChHHhCc-ccCHHHHHHHHHHhcCCCccCccHHHHhcCc
Confidence 1112221111 11112 3667899999999999999999999998754
No 20
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-39 Score=372.14 Aligned_cols=257 Identities=30% Similarity=0.516 Sum_probs=210.0
Q ss_pred hcCcccceeeeecCceEEEEEEEC---Cc----eEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR---GE----KAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SL 556 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~---g~----~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~ 556 (790)
..+.++.+.||+|.||.||+|... +. .||||.++. +...+|.+|..+|++++|||||+++|+|.+. ..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 345667899999999999999875 33 489998864 4567899999999999999999999999864 48
Q ss_pred EEEEEEecCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeC
Q 046083 557 FLVYEYIENGNLNQHLRGSG-----KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFG 631 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfG 631 (790)
++++|||++|+|..||++.. ...++....+.++.+||+|+.||++++. |||||..+|+||++...+||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~f---vHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHF---VHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCC---cCcchhhhheeecccCcEEEcccc
Confidence 99999999999999999762 3468999999999999999999999997 999999999999999999999999
Q ss_pred CCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHc
Q 046083 632 LAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLR 709 (790)
Q Consensus 632 la~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
||+....... .......-...|||||.+..+.++.|+|||||||+|||++| |..||..... .+....+.+
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n--------~~v~~~~~~ 919 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN--------FEVLLDVLE 919 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch--------HHHHHHHHh
Confidence 9994432222 22222344679999999999999999999999999999998 7777754332 112222222
Q ss_pred CCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCc
Q 046083 710 QPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770 (790)
Q Consensus 710 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~ 770 (790)
. . +-+.|..++..+.+||..||+.+|++||++..+++.+..+.+...
T Consensus 920 g-------------g-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 920 G-------------G-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred C-------------C-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 1 1 234466788899999999999999999999999998887755443
No 21
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-38 Score=335.68 Aligned_cols=254 Identities=18% Similarity=0.336 Sum_probs=204.4
Q ss_pred ccCHHHHHHHhcCcccceeeeecCceEEEEEEECCceEEEEEeChhh------HHHHHHHHHHHHhcCCCCCcceEEEEe
Q 046083 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQA------SKEFLAELKVLTHVHHLNLVRLIGYCV 552 (790)
Q Consensus 479 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~------~~~~~~E~~~l~~l~h~niv~l~g~~~ 552 (790)
.++.+++. ......||+|++|.||+|.+.|+.+|||.++... .+.|.+|+++|++++||||++++|++.
T Consensus 14 ~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~ 88 (283)
T PHA02988 14 CIESDDID-----KYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFII 88 (283)
T ss_pred ecCHHHcC-----CCCCeEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEE
Confidence 44555552 2224689999999999999999999999986421 356789999999999999999999886
Q ss_pred c-----CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCCCCCEEecCCCcEE
Q 046083 553 E-----GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH-TVPVYIHRDIKPANILIDKNFRAK 626 (790)
Q Consensus 553 ~-----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~vH~dlkp~NILl~~~~~~k 626 (790)
+ ...++||||+++|+|.+++.... .++|....+++.+++.||.|||+. ++ +||||||+|||+++++.+|
T Consensus 89 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~---~Hrdlkp~nill~~~~~~k 163 (283)
T PHA02988 89 DIVDDLPRLSLILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNK---PYKNLTSVSFLVTENYKLK 163 (283)
T ss_pred ecccCCCceEEEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCC---CCCcCChhhEEECCCCcEE
Confidence 5 24789999999999999998643 589999999999999999999985 66 7999999999999999999
Q ss_pred EEEeCCCcccccCCcccccccccCCCccchhcccC--CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHH
Q 046083 627 VADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY--GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALF 704 (790)
Q Consensus 627 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 704 (790)
|+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ....
T Consensus 164 l~dfg~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--------~~~~ 231 (283)
T PHA02988 164 IICHGLEKILSSPP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--------KEIY 231 (283)
T ss_pred EcccchHhhhcccc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--------HHHH
Confidence 99999998653221 23467899999999976 6899999999999999999999999965321 1122
Q ss_pred HHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 705 EEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 705 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
..+... ......+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 232 ~~i~~~-------------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 232 DLIINK-------------NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHhc-------------CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 222211 11112233456679999999999999999999999999998653
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.3e-39 Score=339.67 Aligned_cols=259 Identities=29% Similarity=0.443 Sum_probs=205.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh-----HHHHHHHHHHHHhcCCCCCcceEEEEec---CeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA-----SKEFLAELKVLTHVHHLNLVRLIGYCVE---GSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~lv 559 (790)
+.|+..++||+|.||.||+|+.. |+.||+|++..+. .....+||.+|+++.||||++|.+...+ +.+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 45777889999999999999875 8899999987543 3446799999999999999999998764 469999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
+|||++ +|.-++...+ -.|+..++..++.|++.||.|+|++++ +|||||.+|||||.+|.+||+|||||+++...
T Consensus 197 FeYMdh-DL~GLl~~p~-vkft~~qIKc~mkQLl~Gl~~cH~~gv---lHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSPG-VKFTEPQIKCYMKQLLEGLEYCHSRGV---LHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred Eecccc-hhhhhhcCCC-cccChHHHHHHHHHHHHHHHHHhhcCe---eeccccccceEEcCCCCEEeccccceeeccCC
Confidence 999998 9998887643 359999999999999999999999998 99999999999999999999999999988776
Q ss_pred CcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
.....+..+-|.+|+|||++.+. .|+.+.|+||.||||.||+.|++.|....+. ..+...+ .+...+.. ..+.
T Consensus 272 ~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv----eQl~kIf-klcGSP~e-~~W~ 345 (560)
T KOG0600|consen 272 GSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV----EQLHKIF-KLCGSPTE-DYWP 345 (560)
T ss_pred CCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH----HHHHHHH-HHhCCCCh-hccc
Confidence 66666777889999999999875 7999999999999999999999988665432 1121111 12221111 1111
Q ss_pred -------hhcCCcCCCCCC-------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 719 -------RLVDPRLGDDYP-------IDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 719 -------~~~d~~l~~~~~-------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..+.+. ..+. ...+....+|+..+|..||.+|.|+.++++.
T Consensus 346 ~~kLP~~~~~kp~--~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 346 VSKLPHATIFKPQ--QPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred cccCCcccccCCC--CcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 111111 0111 1234567789999999999999999998863
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6e-39 Score=344.97 Aligned_cols=265 Identities=27% Similarity=0.487 Sum_probs=211.2
Q ss_pred CHHHHHHHhcCcccceeeeecCceEEEEEEECCceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEecCe
Q 046083 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVEGS 555 (790)
Q Consensus 481 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~ 555 (790)
+.+++....+.+.+...||+|.||+||+|+|.| .||||.++. +..+.|++|+..|++-+|.||+-+.|||.+..
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred cccccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 335555556667789999999999999999987 479999874 45678999999999999999999999999888
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
+.+|.-||+|.+|+.+|+-.. ..|+..+.+.|+.|+++|+.|||.++| ||||||..||+|.+++.+||+|||++..
T Consensus 462 ~AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~I---IHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 462 LAIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKNI---IHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred eeeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhhh---hhhhccccceEEccCCcEEEecccceee
Confidence 899999999999999999764 468999999999999999999999998 9999999999999999999999999864
Q ss_pred ccc-CCcccccccccCCCccchhcccC---CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCC
Q 046083 636 TEV-GSASVHTRLVGTFGYMPPEYAQY---GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711 (790)
Q Consensus 636 ~~~-~~~~~~~~~~gt~~y~aPE~~~~---~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (790)
-.. ..........|...|||||+++. ..|+..+||||||+++|||++|..||...... ..-..+...
T Consensus 538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~d---------qIifmVGrG 608 (678)
T KOG0193|consen 538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRD---------QIIFMVGRG 608 (678)
T ss_pred eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChh---------heEEEeccc
Confidence 321 11111222457789999999964 46899999999999999999999999732211 000011111
Q ss_pred CChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccC
Q 046083 712 DPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768 (790)
Q Consensus 712 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~ 768 (790)
....++ .....+++.++.+|+..||..++++||.+.+|+..|..+..+
T Consensus 609 ~l~pd~---------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 609 YLMPDL---------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred ccCccc---------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 000000 011235677899999999999999999999999988876653
No 24
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=8.2e-39 Score=339.49 Aligned_cols=242 Identities=28% Similarity=0.455 Sum_probs=208.6
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e 561 (790)
++|.+.+.||+|.||+||||+.+ .+.||+|.+.+. +.+.+.+|++|+++++||||+.+++++. ..++|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888999999999999999887 678999998643 3345889999999999999999999887 567999999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+.| +|..+|...+. +++..+..++.+++.||.|||++++ +|||+||.|||++.++.+|+||||+|+.+.. ..
T Consensus 82 ~a~g-~L~~il~~d~~--lpEe~v~~~a~~LVsaL~yLhs~ri---lhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~-~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK--LPEEQVRAIAYDLVSALYYLHSNRI---LHRDMKPQNILLEKGGTLKLCDFGLARAMST-NT 154 (808)
T ss_pred hhhh-hHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHhcCc---ccccCCcceeeecCCCceeechhhhhhhccc-Cc
Confidence 9988 99999987654 8999999999999999999999998 9999999999999999999999999998754 34
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
...+...|||-|||||+..+..|+..+|.||+||++|||++|++||... .+..+.+.+..++
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--------si~~Lv~~I~~d~---------- 216 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR--------SITQLVKSILKDP---------- 216 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH--------HHHHHHHHHhcCC----------
Confidence 4566788999999999999999999999999999999999999999652 2334444443321
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...|......+.+++...|.+||..|.|..+++.+
T Consensus 217 -----v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 217 -----VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred -----CCCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 12344667789999999999999999999998764
No 25
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-39 Score=340.95 Aligned_cols=262 Identities=31% Similarity=0.489 Sum_probs=225.5
Q ss_pred HHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEE
Q 046083 483 EELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLF 557 (790)
Q Consensus 483 ~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~ 557 (790)
++++....+..+.++||-|.||.||.|.|+ .-.||||.++.+ ..++|..|..+|+.++|||+|+|+|+|. +..+|
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFY 339 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFY 339 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeE
Confidence 555566677888999999999999999998 567999999864 4578999999999999999999999998 45699
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
||.|||..|+|.+||+...+..++-...+.++.||+.|++||..++. |||||..+|+|+.++..+|++||||++++.
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknF---IHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhccccccceEEeeccchhhhhc
Confidence 99999999999999999888889999999999999999999999997 999999999999999999999999999986
Q ss_pred cCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 638 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
.....-+...-..+.|.|||.+....++.|+|||+|||+|||+.| |..|+... ++. .
T Consensus 417 gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGi--------dlS--------------q 474 (1157)
T KOG4278|consen 417 GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI--------DLS--------------Q 474 (1157)
T ss_pred CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCc--------cHH--------------H
Confidence 544444444555789999999999999999999999999999987 66666432 111 2
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCC
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~ 769 (790)
+..++++..+-+.|..|+..+.+||+.||+++|.+||+++|+-+.++.+.++.
T Consensus 475 VY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~s 527 (1157)
T KOG4278|consen 475 VYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSS 527 (1157)
T ss_pred HHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhccc
Confidence 23444555556667889999999999999999999999999999999875544
No 26
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=346.16 Aligned_cols=257 Identities=30% Similarity=0.514 Sum_probs=208.1
Q ss_pred hcCcccceeeeecCceEEEEEEEC---C--ce-EEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-e
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR---G--EK-AAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-S 555 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~---g--~~-vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~ 555 (790)
.++..+.++||+|.||.||+|++. + .. ||||..+. ...++|.+|.++|+.++|||||++||++... .
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 344556799999999999999886 2 23 89998873 4557899999999999999999999999865 4
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
+++|||+|.||+|.++|+..+. .++..++++++.+.|.||+|||++++ +||||.++|+|++.++.+||+||||++.
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~---IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNC---IHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCC---cchhHhHHHheecCCCeEEeCccccccC
Confidence 8999999999999999998754 69999999999999999999999998 9999999999999999999999999886
Q ss_pred cccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 636 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
....... .....-...|+|||.+..+.|+.++|||||||++||+++ |..|+..... ......+.
T Consensus 312 ~~~~~~~-~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~--------~~v~~kI~------ 376 (474)
T KOG0194|consen 312 GSQYVMK-KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN--------YEVKAKIV------ 376 (474)
T ss_pred Ccceeec-cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH--------HHHHHHHH------
Confidence 4311111 111124679999999999999999999999999999998 7778755332 11222221
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCcc
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSED 771 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~ 771 (790)
....+...+...+..+..++.+||..+|++||+|.++.+.|..+......
T Consensus 377 -------~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 377 -------KNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred -------hcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 22222334446677888999999999999999999999999988665553
No 27
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-38 Score=339.24 Aligned_cols=246 Identities=26% Similarity=0.462 Sum_probs=205.1
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEEec
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIE 564 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~~~ 564 (790)
.|..-.+||+|..|.||.|... ++.||||++... ..+-+.+|+.+|+..+|+|||.+++-+. .+++|+|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 4666789999999999999875 788999998642 3455889999999999999999998554 667999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+|+|.+.+... .+++.++..|++++++||+|||.+++ +|||||.+|||++.+|.+||+|||++..+..... ..
T Consensus 354 ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~gI---iHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR 426 (550)
T KOG0578|consen 354 GGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARGI---IHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KR 426 (550)
T ss_pred CCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcce---eeeccccceeEeccCCcEEEeeeeeeeccccccC-cc
Confidence 99999999864 48999999999999999999999998 9999999999999999999999999987654433 34
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...+||+.|||||+.....|++|.||||||++++||+-|++||....+ +..++.-... . .+.
T Consensus 427 ~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P-------lrAlyLIa~n-g----------~P~ 488 (550)
T KOG0578|consen 427 STMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP-------LRALYLIATN-G----------TPK 488 (550)
T ss_pred ccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh-------HHHHHHHhhc-C----------CCC
Confidence 557899999999999999999999999999999999999999976332 1111111111 0 111
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
-..+......|.+++.+||+.|+++||++.|+|++--
T Consensus 489 --lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpF 525 (550)
T KOG0578|consen 489 --LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPF 525 (550)
T ss_pred --cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChh
Confidence 1234566788999999999999999999999998533
No 28
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-38 Score=342.04 Aligned_cols=264 Identities=27% Similarity=0.467 Sum_probs=218.2
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhc-CCCCCcceEEEEe-cCeEE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHV-HHLNLVRLIGYCV-EGSLF 557 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l-~h~niv~l~g~~~-~~~~~ 557 (790)
..++|.+.+.||+|.||.|+.+..+ ++.+|||.+++ ++.+..+.|.+++... +||.++.++.++. +.++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4578999999999999999999987 77899999875 4457788899998888 5999999999876 56799
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
+||||+.||++..+.+ ...+++..+..++..|+.||+|||+++| |+||||.+|||||.+|.+||+||||++..-
T Consensus 446 fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~I---IYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGI---IYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCc---eeeecchhheEEcccCcEEecccccccccC
Confidence 9999999999555444 2469999999999999999999999998 999999999999999999999999998643
Q ss_pred cCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 638 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
. .......++||+.|||||++.+..|+...|+|||||+|||||.|+.||...++. ..+..++..
T Consensus 520 ~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe--------e~FdsI~~d------- 583 (694)
T KOG0694|consen 520 G-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE--------EVFDSIVND------- 583 (694)
T ss_pred C-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHhcC-------
Confidence 2 233456789999999999999999999999999999999999999999765432 233333321
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCCcCCccccccccccccCC
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSFYENQGLDSLMSGR 790 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 790 (790)
...+|...+.+...++++++..+|++|--+. ....++...+.||...+|+.|+..+
T Consensus 584 --------~~~yP~~ls~ea~~il~~ll~k~p~kRLG~~---------e~d~~~i~~hpFFr~i~w~~L~~r~ 639 (694)
T KOG0694|consen 584 --------EVRYPRFLSKEAIAIMRRLLRKNPEKRLGSG---------ERDAEDIKKHPFFRSIDWDDLLNRR 639 (694)
T ss_pred --------CCCCCCcccHHHHHHHHHHhccCcccccCCC---------CCCchhhhhCCccccCCHHHHhhcc
Confidence 1235667778899999999999999996542 2234455677888888888887653
No 29
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-37 Score=320.48 Aligned_cols=263 Identities=30% Similarity=0.473 Sum_probs=210.2
Q ss_pred hcCcccceeeeecCceEEEEEEECCceEEEEEeChhhHHHHHHHHHHHHhc--CCCCCcceEEEEec--C---eEEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGYCVE--G---SLFLVYE 561 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~--~---~~~lv~e 561 (790)
..+..+.+.||+|.||.||+|.|+|+.||||++...+.+.+++|.++++.+ +|+||+.+++.-.. + ++|||.+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTd 289 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTD 289 (513)
T ss_pred hheeEEEEEecCccccceeeccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeee
Confidence 456788999999999999999999999999999999899999999999876 99999999986542 2 3899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-----CCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-----HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-----~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
|.+.|+|+|||.. ..++....++++..+|.||+|||. +|.|.|.|||||+.|||+..++...|+|+|||...
T Consensus 290 YHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h 366 (513)
T KOG2052|consen 290 YHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 366 (513)
T ss_pred cccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEe
Confidence 9999999999986 469999999999999999999994 67788999999999999999999999999999876
Q ss_pred ccCCccc---ccccccCCCccchhcccCCC----C--CchhhHHHHHHHHHHHHhC----------Cccccccccccccc
Q 046083 637 EVGSASV---HTRLVGTFGYMPPEYAQYGE----V--SPKIDVYAFGVVLYELISA----------MEAVVKTNETITES 697 (790)
Q Consensus 637 ~~~~~~~---~~~~~gt~~y~aPE~~~~~~----~--s~~sDvwS~Gvvl~elltG----------~~p~~~~~~~~~~~ 697 (790)
....... ....+||-+|||||++...- + -..+||||||.|+||+.-. +.||...
T Consensus 367 ~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~------- 439 (513)
T KOG2052|consen 367 DSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV------- 439 (513)
T ss_pred cccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC-------
Confidence 5443221 23468999999999996431 2 2369999999999999642 2333221
Q ss_pred cchHHHHHHHHcCCCChhhhhhh-cCCcCCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCcc
Q 046083 698 TGLVALFEEVLRQPDPREDLQRL-VDPRLGDDY-----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSED 771 (790)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~l~~~-~d~~l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~ 771 (790)
....+..+++.++ ...++++.. ..+....+.+||+.||..+|.-|-|+-.+-..|.++..+++.
T Consensus 440 ----------Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~ek 509 (513)
T KOG2052|consen 440 ----------VPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSDEK 509 (513)
T ss_pred ----------CCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcChhh
Confidence 1112222222222 233343333 356788899999999999999999999999999988765443
No 30
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-38 Score=332.41 Aligned_cols=261 Identities=29% Similarity=0.483 Sum_probs=210.1
Q ss_pred HhcCcccceeeeecCceEEEEEEECC-ceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELRG-EKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~g-~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
......+.++||+|.||.|..+...+ ..||||.++.. ...+|.+|+++|.+++||||+.++|+|.. +.+++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 44567889999999999999999985 89999999853 34789999999999999999999999984 55899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
||++|+|.+|+.++....+.-....+|+.||+.|++||.+.+. |||||.++|+|+|.++++||+|||+++.+..+..
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nf---VHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNF---VHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhch---hhccccccceeecCcccEEecCcccccccccCCc
Confidence 9999999999998765555667778899999999999999998 9999999999999999999999999996654443
Q ss_pred cc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh--CCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 642 SV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS--AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 642 ~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
.. ..+.+-...|||+|.+..++++.++|||+||+++||+++ ...||...... +..+-...+++....
T Consensus 693 y~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e-----~vven~~~~~~~~~~----- 762 (807)
T KOG1094|consen 693 YRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE-----QVVENAGEFFRDQGR----- 762 (807)
T ss_pred eeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH-----HHHHhhhhhcCCCCc-----
Confidence 32 234556789999999999999999999999999999864 56676543321 111111111111110
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
.....-|.-++..+.+++.+||..+-++||+++++...|....
T Consensus 763 -----~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 763 -----QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred -----ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 1111235567788999999999999999999999998887643
No 31
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.4e-37 Score=324.20 Aligned_cols=251 Identities=23% Similarity=0.371 Sum_probs=200.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC-----CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-----GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFL 558 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-----g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~l 558 (790)
.++|++.+.||+|+||.||+|.+. +..+|+|.++.. ..+.|.+|+..+.+++||||+++++++.. ...++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356889999999999999999764 458999988743 23568899999999999999999998875 45899
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
||||+++|+|.+++.... ..+++..+++++.+++.||+|||++++ +||||||+|||++.++.+|++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~i---iH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMGY---VHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCE---eeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999998643 368999999999999999999999997 9999999999999999999999998765322
Q ss_pred CCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
..........++..|+|||.+.+..++.++|||||||++|||++ |..||...... .......+.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~------- 224 (266)
T cd05064 160 EAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--------DVIKAVEDG------- 224 (266)
T ss_pred cchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHHCC-------
Confidence 21111112335678999999999999999999999999999875 99998643221 111111110
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.....+...+..+.+++.+||+.+|++||++++|.+.|.++
T Consensus 225 -------~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 -------FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 11122334556789999999999999999999999998764
No 32
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.1e-37 Score=302.61 Aligned_cols=262 Identities=25% Similarity=0.402 Sum_probs=204.1
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhH-----HHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS-----KEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
++|...++||+|.||.||+|+.. |+.||||+++.... ....+|++.|+.++|+||+.+++++.. +.+.||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 46777899999999999999986 89999999975433 357899999999999999999998874 56899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
||+. +|...++... ..++-..+..++.++++|++|||++.+ +||||||.|+|++++|.+||+|||+|+.+.....
T Consensus 82 fm~t-dLe~vIkd~~-i~l~pa~iK~y~~m~LkGl~y~H~~~I---lHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKN-IILSPADIKSYMLMTLKGLAYCHSKWI---LHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred eccc-cHHHHhcccc-cccCHHHHHHHHHHHHHHHHHHHhhhh---hcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 9987 9999998764 468889999999999999999999998 9999999999999999999999999998765443
Q ss_pred ccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh--h--
Q 046083 642 SVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE--D-- 716 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 716 (790)
.. +..+.|..|+|||.+.+. .|+...||||.||++.||+-|.+-|....+- +........+..+.+.. .
T Consensus 157 ~~-~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi-----dQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 157 IQ-THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI-----DQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred cc-ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH-----HHHHHHHHHcCCCCcccCcccc
Confidence 32 223678999999999875 6999999999999999999887766543321 11122222333222110 1
Q ss_pred -------hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 717 -------LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 717 -------l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
++..-.+.+.. .-........+++..|+..||.+|+|+.|++++=.
T Consensus 231 ~lpdY~~~~~~P~~~~~~-lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~y 283 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNN-LFPAASSDALDLLSKMLTYNPKKRITASQALKHPY 283 (318)
T ss_pred ccccHHHHhcCCCCcccc-ccccccHHHHHHHHhhhccCchhcccHHHHhcchh
Confidence 11111112221 22334556689999999999999999999988644
No 33
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-37 Score=321.77 Aligned_cols=272 Identities=28% Similarity=0.424 Sum_probs=216.5
Q ss_pred cccceeeeecCceEEEEEEECCceEEEEEeChhhHHHHHHHHHHHHhc--CCCCCcceEEEEec-----CeEEEEEEEec
Q 046083 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV--HHLNLVRLIGYCVE-----GSLFLVYEYIE 564 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~~~~~~~E~~~l~~l--~h~niv~l~g~~~~-----~~~~lv~e~~~ 564 (790)
..+.+.||+|+||.||+|.++++.||||++..+..+.|.+|-+|++.. +|+||+++++.... .+++||+||.+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~ 291 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHP 291 (534)
T ss_pred hhhHHHhhcCccceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeecc
Confidence 445678999999999999999999999999999999999999998875 79999999987652 25899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhC------CCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH------TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~------~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
.|+|.+||... .++|....+|+..+++||+|||+. ..|+|+|||||++||||.+|++..|+|||+|..+..
T Consensus 292 kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p 368 (534)
T KOG3653|consen 292 KGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEP 368 (534)
T ss_pred CCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecC
Confidence 99999999864 699999999999999999999963 346799999999999999999999999999998865
Q ss_pred CCccc-ccccccCCCccchhcccCCC-CC-----chhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCC
Q 046083 639 GSASV-HTRLVGTFGYMPPEYAQYGE-VS-----PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711 (790)
Q Consensus 639 ~~~~~-~~~~~gt~~y~aPE~~~~~~-~s-----~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (790)
+.... ....+||.+|||||++.+.- +. .+.||||+|.|||||++....+.. ++ .......++.-+...
T Consensus 369 ~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~-~~----vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 369 GKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADP-GP----VPEYQLPFEAEVGNH 443 (534)
T ss_pred CCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccC-CC----CCcccCchhHHhcCC
Confidence 43322 22368999999999997642 22 369999999999999997665532 11 112223344444444
Q ss_pred CChhhhhhhcC-CcCCCCCCH-----HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCcc
Q 046083 712 DPREDLQRLVD-PRLGDDYPI-----DSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSED 771 (790)
Q Consensus 712 ~~~~~l~~~~d-~~l~~~~~~-----~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~ 771 (790)
+..+.+++++- ++.++.++. ..+.-+.+.+..||+.||+.|-|+.=|.+.++.+...+..
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 44455554443 233333332 3456788999999999999999999999999998877765
No 34
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-37 Score=334.61 Aligned_cols=250 Identities=26% Similarity=0.439 Sum_probs=207.5
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh--------hHHHHHHHHHHHHhcC-CCCCcceEEEEe-cCe
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--------ASKEFLAELKVLTHVH-HLNLVRLIGYCV-EGS 555 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~--------~~~~~~~E~~~l~~l~-h~niv~l~g~~~-~~~ 555 (790)
...+|.+.+.||+|.||.|+.|... ++.+|+|.++.+ ..+.+.+|+.++++++ ||||++++.++. ...
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 3567899999999999999999875 899999977653 2345678999999998 999999999987 456
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC-CcEEEEEeCCCc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN-FRAKVADFGLAK 634 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~-~~~kl~DfGla~ 634 (790)
.|+||||+.+|+|.+++...+ .+.+....++++|++.|++|||++++ +||||||+|||+|.+ +++||+|||++.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~gi---~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSRGI---VHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhCCE---eeCCCCHHHEEecCCCCCEEEecccccc
Confidence 999999999999999999844 58889999999999999999999998 999999999999999 999999999999
Q ss_pred ccccCCcccccccccCCCccchhcccCCC-CC-chhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGE-VS-PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~s-~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
... .........+|++.|+|||++.+.. |+ .++||||+||+||.|++|+.||.... ...++..+....
T Consensus 170 ~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~--------~~~l~~ki~~~~- 239 (370)
T KOG0583|consen 170 ISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN--------VPNLYRKIRKGE- 239 (370)
T ss_pred ccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc--------HHHHHHHHhcCC-
Confidence 774 3334556689999999999999877 76 78999999999999999999997622 222222222211
Q ss_pred ChhhhhhhcCCcCCCCCCHHH-HHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 713 PREDLQRLVDPRLGDDYPIDS-VRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 713 ~~~~l~~~~d~~l~~~~~~~~-~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
-.+|... ..++..++.+|+..||.+|+|+.+|+.+=+...
T Consensus 240 --------------~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 240 --------------FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred --------------ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1222223 567899999999999999999999997666443
No 35
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=6.6e-37 Score=331.37 Aligned_cols=257 Identities=23% Similarity=0.401 Sum_probs=206.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--Cc----eEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GE----KAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~----~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv 559 (790)
.+|+..+.||+|+||.||+|.+. +. .+|+|.++. ...+++.+|+.+++.++||||++++|+|.....+++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v 86 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 86 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence 46899999999999999999864 33 389999863 334678899999999999999999999988888999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
+||+++|+|.+++.... ..+++..+++++.|++.||+|||+.++ +||||||+|||++.++.+||+|||+++.....
T Consensus 87 ~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i---iH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 87 TQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCe---eccccchhheEecCCCcEEEccccccccccCC
Confidence 99999999999998653 358899999999999999999999997 99999999999999999999999999876533
Q ss_pred Ccccc-cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 640 SASVH-TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 640 ~~~~~-~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
..... ....++..|+|||++.+..++.++||||||+++|||++ |..||..... .. .......
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--------~~-~~~~~~~------- 226 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--------SE-ISSILEK------- 226 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------HH-HHHHHhC-------
Confidence 22211 12234678999999999999999999999999999998 9888854221 01 1111111
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccC
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDW 772 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~ 772 (790)
......+..+...+.+++.+||+.+|.+||++.+++..|..+......|
T Consensus 227 ------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~~~ 275 (316)
T cd05108 227 ------GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRY 275 (316)
T ss_pred ------CCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCchh
Confidence 1111112233456889999999999999999999999999887766543
No 36
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=8.8e-37 Score=321.24 Aligned_cols=251 Identities=30% Similarity=0.508 Sum_probs=204.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEec
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIE 564 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~ 564 (790)
.+|++.+.||+|+||.||+|.+. +..+++|.++.. ..+++.+|++++++++|+|++++++++.. +..+++|||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 85 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence 45788899999999999999875 788999998743 34578999999999999999999998874 45899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+++|.+++.......+++..++.++.|+++||+|||++++ +||||||+|||+++++.+||+|||++...........
T Consensus 86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i---~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~ 162 (263)
T cd05052 86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 162 (263)
T ss_pred CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence 9999999987655678999999999999999999999997 9999999999999999999999999986643322222
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
....++..|+|||.+.+..++.++||||||+++|||++ |..|+..... ...+.....
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--------~~~~~~~~~-------------- 220 (263)
T cd05052 163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--------SQVYELLEK-------------- 220 (263)
T ss_pred CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHC--------------
Confidence 22334668999999998999999999999999999998 8888753221 111111111
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
......+...+..+.+++.+||+.+|++||++.++++.|..+
T Consensus 221 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 221 GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 111222334456799999999999999999999999998864
No 37
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.9e-37 Score=325.74 Aligned_cols=244 Identities=32% Similarity=0.606 Sum_probs=192.2
Q ss_pred cceeeeecCceEEEEEEEC------CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 494 MGNKIGQGGFGAVFYAELR------GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 494 ~~~~lG~G~fg~Vy~a~~~------g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+.+.||.|.||.||+|.+. +..|+||.++. +..++|.+|++.+++++||||++++|++.+ +..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 5689999999999999987 56899999964 235789999999999999999999999984 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc-
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA- 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~- 641 (790)
+++|+|.++|.......+++..+++++.|+++||.|||++++ +|+||+++|||++.++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~i---iH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNI---IHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE---EEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred cccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 999999999998755679999999999999999999999987 9999999999999999999999999987632211
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
...........|+|||.+....++.++||||||+++|||++ |+.|+..... ......+..
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--------~~~~~~~~~----------- 220 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--------EEIIEKLKQ----------- 220 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--------HHHHHHHHT-----------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccc-----------
Confidence 12223456779999999998889999999999999999999 6777644321 111122211
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
. .....+...+..+.+++.+||+.+|++|||+.++++.|
T Consensus 221 --~-~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 221 --G-QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --T-EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --c-ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1 11122334566789999999999999999999999876
No 38
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=323.85 Aligned_cols=259 Identities=27% Similarity=0.422 Sum_probs=207.7
Q ss_pred HHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----------------hHHHHHHHHHHHHhcCCCC
Q 046083 483 EELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----------------ASKEFLAELKVLTHVHHLN 543 (790)
Q Consensus 483 ~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----------------~~~~~~~E~~~l~~l~h~n 543 (790)
.+-.+..++|++.+.||+|.||.|-+|+.. ++.+|||++... ..+...+|+.+|++++|||
T Consensus 90 ~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~n 169 (576)
T KOG0585|consen 90 DQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPN 169 (576)
T ss_pred cccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcC
Confidence 334455688999999999999999999876 889999998532 1256889999999999999
Q ss_pred CcceEEEEec---CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEec
Q 046083 544 LVRLIGYCVE---GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILID 620 (790)
Q Consensus 544 iv~l~g~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~ 620 (790)
||+|+.+-.+ ..+|||+|||..|.+.+.-.. +..++..+++++++++..||+|||.+++ |||||||+|+||+
T Consensus 170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d--~~els~~~Ar~ylrDvv~GLEYLH~Qgi---iHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD--KPELSEQQARKYLRDVVLGLEYLHYQGI---IHRDIKPSNLLLS 244 (576)
T ss_pred eeEEEEeecCcccCceEEEEEeccCCccccCCCC--cccccHHHHHHHHHHHHHHHHHHHhcCe---eccccchhheEEc
Confidence 9999999874 358999999998887544332 2239999999999999999999999998 9999999999999
Q ss_pred CCCcEEEEEeCCCcccccCC----cccccccccCCCccchhcccCCC----CCchhhHHHHHHHHHHHHhCCcccccccc
Q 046083 621 KNFRAKVADFGLAKLTEVGS----ASVHTRLVGTFGYMPPEYAQYGE----VSPKIDVYAFGVVLYELISAMEAVVKTNE 692 (790)
Q Consensus 621 ~~~~~kl~DfGla~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDvwS~Gvvl~elltG~~p~~~~~~ 692 (790)
++|++||+|||.+.....+. ........|||.|+|||.+.++. .+.+.||||+||+||.|+.|+.||....
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~- 323 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF- 323 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch-
Confidence 99999999999998653321 12233578999999999997743 3568999999999999999999996532
Q ss_pred ccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 693 TITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
...++..+.. ..+.-....++.+.+.+|+.++|++||+.|.+..+|..+.+....
T Consensus 324 -------~~~l~~KIvn-------------~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 324 -------ELELFDKIVN-------------DPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred -------HHHHHHHHhc-------------CcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 2233333333 333222223566789999999999999999999999988886543
No 39
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=8e-37 Score=321.01 Aligned_cols=252 Identities=23% Similarity=0.449 Sum_probs=203.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEec
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIE 564 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~ 564 (790)
.++|++.++||+|+||.||+|... +..+++|.+... ..+.+.+|+.++++++|+||+++++++.+. ..+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 357899999999999999999876 677999988643 346789999999999999999999987654 5899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+++|.+++.......+++..++.++.+++.||+|||+.++ +|+||||+||+++.++.++|+|||++...........
T Consensus 85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i---~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05072 85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNY---IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR 161 (261)
T ss_pred CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence 9999999976545568999999999999999999999997 9999999999999999999999999987643322222
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
....++..|+|||++....++.++||||||+++|||++ |..||...... .....+....
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--------~~~~~~~~~~------------ 221 (261)
T cd05072 162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--------DVMSALQRGY------------ 221 (261)
T ss_pred CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--------HHHHHHHcCC------------
Confidence 23345678999999998899999999999999999998 88888543211 1111111110
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
........+..+.+++.+||+.+|++||+++++.+.|+.+
T Consensus 222 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 222 --RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred --CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0011122345788999999999999999999999998753
No 40
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.6e-37 Score=312.01 Aligned_cols=263 Identities=25% Similarity=0.369 Sum_probs=205.8
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhHH-----HHHHHHHHHHhcCCCCCcceEEEEec---CeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASK-----EFLAELKVLTHVHHLNLVRLIGYCVE---GSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~-----~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~lv 559 (790)
++|+.++.|++|+||.||+|+++ ++.||+|+++.+..+ .-.+|+.+|.+++|||||.+-.+... ++.|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 45778999999999999999987 889999999875543 36789999999999999999988763 358999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
||||+. +|..+++... +++...+..-+..|+++|++|||.+.+ +|||||++|+|++..|.+||+|||+|+.+...
T Consensus 156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wi---lHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWI---LHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhcee---EecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999999 9999998765 579999999999999999999999998 99999999999999999999999999987643
Q ss_pred CcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC----Ch
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD----PR 714 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 714 (790)
. ...+..+-|.+|+|||.+.+. .|++..|+||+|||+.||+++++.|....+. ..+...+ ..+..+. +.
T Consensus 231 ~-k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~----dQl~~If-~llGtPte~iwpg 304 (419)
T KOG0663|consen 231 L-KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI----DQLDKIF-KLLGTPSEAIWPG 304 (419)
T ss_pred c-ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH----HHHHHHH-HHhCCCccccCCC
Confidence 2 234556779999999999875 6999999999999999999999888665432 1122222 2222111 00
Q ss_pred -hhhh--------hhcCCcCCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 715 -EDLQ--------RLVDPRLGDDYPID-SVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 715 -~~l~--------~~~d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..+. ......++..|+.. ..+.-++|+..++..||.+|-|++|.+.+=.
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred ccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 0000 00011122223322 4467789999999999999999999887544
No 41
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=6.5e-37 Score=339.08 Aligned_cols=252 Identities=25% Similarity=0.429 Sum_probs=198.3
Q ss_pred hcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhc-CCCCCcceEEEEecC-e
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHV-HHLNLVRLIGYCVEG-S 555 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~-~ 555 (790)
.++|++.+.||+|+||.||+|.+. +..+|||.++.. ..+.+.+|++++..+ +||||++++++|.++ .
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 457889999999999999999742 457999998642 335688999999999 899999999998754 5
Q ss_pred EEEEEEEecCCChhhhhhcCC-----------------------------------------------------------
Q 046083 556 LFLVYEYIENGNLNQHLRGSG----------------------------------------------------------- 576 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 576 (790)
.++||||+++|+|.++++...
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 899999999999999986422
Q ss_pred --------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 577 --------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 577 --------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
...++|..+++++.++++||+|||++++ +||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---vH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1247899999999999999999999997 99999999999999999999999999865432221
Q ss_pred c-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 643 V-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 643 ~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
. .....++..|+|||.+.+..++.++|||||||++|||++ |..||...... ... ...+..
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-------~~~-~~~~~~---------- 332 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-------SKF-YKMIKE---------- 332 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-------HHH-HHHHHh----------
Confidence 1 112334668999999999999999999999999999998 88887543211 011 111111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
......+...+.++.+++.+||+.||++||++.||++.|++
T Consensus 333 ---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 333 ---GYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ---CccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 11111122234578999999999999999999999999986
No 42
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-36 Score=323.84 Aligned_cols=250 Identities=28% Similarity=0.545 Sum_probs=201.9
Q ss_pred cCcccceeeeecCceEEEEEEECC-------ceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLF 557 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~g-------~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~ 557 (790)
++|++.+.||+|+||.||+|...+ ..+++|.++.. ...+|.+|++++.+++||||+++++++.+. ..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999998752 46899988642 235688999999999999999999998754 589
Q ss_pred EEEEEecCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC
Q 046083 558 LVYEYIENGNLNQHLRGSGK--------------DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF 623 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~ 623 (790)
++|||+++++|.+++..... ..+++..++.++.+++.||.|||++++ +|+||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i---~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHF---VHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccccccceEEEcCCC
Confidence 99999999999999975321 458899999999999999999999997 9999999999999999
Q ss_pred cEEEEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchH
Q 046083 624 RAKVADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLV 701 (790)
Q Consensus 624 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 701 (790)
.+||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~-------- 233 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-------- 233 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--------
Confidence 999999999986533221 12223456788999999998899999999999999999998 99888543211
Q ss_pred HHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 702 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.....+. .......+...+.++.+|+.+||+.||.+||++.||++.|..
T Consensus 234 ~~~~~i~--------------~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 234 EVIEMIR--------------SRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHH--------------cCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1111111 111122344566789999999999999999999999999975
No 43
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-37 Score=337.51 Aligned_cols=246 Identities=26% Similarity=0.396 Sum_probs=207.9
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
|.+++.||.|+.|.|-.|+.. |+.+|||.+... ....+.+|+-+|+-+.|||++++|+++.+ .++|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 677899999999999999885 999999998653 22457899999999999999999998875 569999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++|.|+++|..++ ++.+.+..++++||+.|+.|+|..++ +||||||+|+|||..+++||+|||||.+... ..
T Consensus 94 v~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~i---cHRDLKpENlLLd~~~nIKIADFGMAsLe~~--gk 166 (786)
T KOG0588|consen 94 VPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNI---CHRDLKPENLLLDVKNNIKIADFGMASLEVP--GK 166 (786)
T ss_pred cCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcc---eeccCCchhhhhhcccCEeeeccceeecccC--Cc
Confidence 99999999998876 58999999999999999999999998 9999999999999999999999999986543 33
Q ss_pred cccccccCCCccchhcccCCCCC-chhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVS-PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s-~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
....-+|+++|.+||++++..|+ .++||||.|||||.||||+.||... ++..+...+-...
T Consensus 167 lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd--------Nir~LLlKV~~G~---------- 228 (786)
T KOG0588|consen 167 LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD--------NIRVLLLKVQRGV---------- 228 (786)
T ss_pred cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc--------cHHHHHHHHHcCc----------
Confidence 44567899999999999999885 6899999999999999999999632 2222222222111
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
-+.|...+.+..+|+++|+..||++|.|++||+.+-+-..-
T Consensus 229 -----f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 229 -----FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred -----ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 12355677789999999999999999999999998775443
No 44
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.4e-36 Score=317.82 Aligned_cols=252 Identities=28% Similarity=0.479 Sum_probs=204.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecC
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIEN 565 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~ 565 (790)
.++|++.++||+|+||.||+|.+. ...+++|.++.. ..+++.+|++++++++|+||+++++++.+...++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~ 84 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 84 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCC
Confidence 356899999999999999999876 457999998742 34678999999999999999999998877778999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++.......+++..+..++.+++.||+|||+.++ +|+||||+||++++++.+||+|||+++...........
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i---~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~ 161 (262)
T cd05071 85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY---VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 161 (262)
T ss_pred CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc---cccccCcccEEEcCCCcEEeccCCceeecccccccccc
Confidence 999999986544568999999999999999999999998 99999999999999999999999999866433322222
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...++..|+|||+..+..++.++||||||+++|||++ |..||...... .........
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~~-------------- 219 (262)
T cd05071 162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVERG-------------- 219 (262)
T ss_pred CCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhcC--------------
Confidence 3446678999999988899999999999999999999 77787543211 111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.....+.+.+..+.+++.+|++.+|++||++.++++.|+..
T Consensus 220 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 220 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00112234556789999999999999999999999998864
No 45
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.1e-36 Score=317.93 Aligned_cols=252 Identities=25% Similarity=0.447 Sum_probs=203.4
Q ss_pred hcCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEec
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIE 564 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~ 564 (790)
.++|++.+.||+|++|.||+|.+. +..+|+|.++.. ..+++.+|++++++++|+|++++++++.. +..+++|||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeeccc
Confidence 467899999999999999999876 668999998753 34678999999999999999999998875 45899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+++|.+++.......+++..+..++.+++.||.|||+.++ +|+||||+||++++++.+||+|||+++..........
T Consensus 85 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~ 161 (261)
T cd05068 85 YGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNY---IHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAR 161 (261)
T ss_pred CCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeccCCcceEEEcCCCCEEECCcceEEEccCCccccc
Confidence 9999999987554568999999999999999999999998 9999999999999999999999999987642221111
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
.....+..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+..
T Consensus 162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~-------------- 219 (261)
T cd05068 162 EGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--------AEVLQQVDQ-------------- 219 (261)
T ss_pred CCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHc--------------
Confidence 11223457999999998899999999999999999999 8888854321 111111111
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
......+...+..+.+++.+|++.+|.+||++.++++.|+.+
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 220 GYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred CCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 111112233456789999999999999999999999998753
No 46
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-38 Score=327.79 Aligned_cols=243 Identities=28% Similarity=0.434 Sum_probs=203.0
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEe
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYI 563 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~ 563 (790)
.|+..+.||+|.||.||+|.+. ++.||+|.+..+ ..+++..|+.+|.+++++||.+.||.+..+ .++++|||+
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 4666789999999999999986 889999999854 446789999999999999999999987765 589999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
.+|++.+.|.... .+++....-++++++.||.|||.++. +|||||+.|||+..+|.+||+|||.+-.+.......
T Consensus 94 ~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~k---iHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr 168 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKK---IHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR 168 (467)
T ss_pred cCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcce---ecccccccceeEeccCcEEEEecceeeeeechhhcc
Confidence 9999999998654 35777788889999999999999998 999999999999999999999999998765433332
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
..++||+.|||||++....|+.|+||||||++.+||.+|.+|+....+... ...+.+-..|
T Consensus 169 -~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv------------------lflIpk~~PP 229 (467)
T KOG0201|consen 169 -KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV------------------LFLIPKSAPP 229 (467)
T ss_pred -ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE------------------EEeccCCCCC
Confidence 568999999999999988999999999999999999999999876544100 0112222334
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.+.+ .....+.+++..||+.||+.||++.+++.+
T Consensus 230 ~L~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 230 RLDG----DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred cccc----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 4444 344568999999999999999999998763
No 47
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=8.4e-37 Score=337.93 Aligned_cols=255 Identities=24% Similarity=0.418 Sum_probs=200.3
Q ss_pred HhcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhc-CCCCCcceEEEEec-C
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-G 554 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~ 554 (790)
..++|.+.+.||+|+||.||+|... +..||+|.++.. ..+.+.+|+++++.+ +|+||++++++|.+ +
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3457889999999999999999753 247999998642 235688999999999 89999999998875 4
Q ss_pred eEEEEEEEecCCChhhhhhcCC----------------------------------------------------------
Q 046083 555 SLFLVYEYIENGNLNQHLRGSG---------------------------------------------------------- 576 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 576 (790)
..++||||+++|+|.++++...
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 5899999999999999986421
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc-ccc
Q 046083 577 ----------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHT 645 (790)
Q Consensus 577 ----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~-~~~ 645 (790)
...+++..+++++.|++.||+|||++++ +||||||+|||+++++.+||+|||+++........ ...
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gi---iHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNC---IHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCE---EeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 1247889999999999999999999997 99999999999999999999999999865432211 111
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...++..|+|||++.+..++.++|||||||++|||++ |+.||...... . ........ .
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~----~----~~~~~~~~-------------~ 331 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN----S----KFYKMVKR-------------G 331 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc----H----HHHHHHHc-------------c
Confidence 2335678999999998899999999999999999997 99998643211 0 01111111 1
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
.....+...+.++.+++.+||+.||.+|||+.+|++.|.++.
T Consensus 332 ~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 332 YQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 111112223467899999999999999999999999998763
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.4e-36 Score=323.89 Aligned_cols=248 Identities=25% Similarity=0.386 Sum_probs=198.8
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
.|+..+.||+|+||.||++... ++.+|+|.+.... ...+.+|++++.+++|+|++++++++.+ +..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3778899999999999999875 8899999886422 2357789999999999999999998764 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+++|+|.+++.......+++..+..++.|++.||+|||+.++ +||||||+|||+++++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---iH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERI---VYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---EeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 9999999988875544568999999999999999999999997 999999999999999999999999998653221
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
......|+..|+|||++.+..++.++|||||||++|||++|+.||....... ..........
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-----~~~~~~~~~~------------ 218 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-----KREEVDRRVK------------ 218 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-----hHHHHHHHhh------------
Confidence 2234568999999999999999999999999999999999999997543210 0000000000
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPS-----MRAIVVAL 762 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~L 762 (790)
. ....++......+.+|+.+||+.||.+||+ +++++++-
T Consensus 219 ~--~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~ 262 (285)
T cd05631 219 E--DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262 (285)
T ss_pred c--ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCH
Confidence 0 011223344567889999999999999997 78887753
No 49
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.1e-36 Score=316.96 Aligned_cols=248 Identities=27% Similarity=0.472 Sum_probs=199.1
Q ss_pred cCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecC
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIEN 565 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~ 565 (790)
++|++.+.||+|+||.||++.++ +..+|+|.+... ..+++.+|++++++++||||+++++++.+. ..+++|||+++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~ 83 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMEN 83 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCC
Confidence 45888999999999999999887 558999987643 346789999999999999999999988754 58999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.++++... ..+++..+..++.+++.||.|||++++ +|+||||+||+++.++.+||+|||+++...........
T Consensus 84 ~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05114 84 GCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSF---IHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS 159 (256)
T ss_pred CcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCc---cccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence 99999997543 258999999999999999999999998 99999999999999999999999998865322222222
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||..... ......+.....
T Consensus 160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--------~~~~~~i~~~~~------------ 219 (256)
T cd05114 160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--------YEVVEMISRGFR------------ 219 (256)
T ss_pred CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHCCCC------------
Confidence 2345668999999998899999999999999999999 8888854321 112222221110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
...+......+.+++.+||+.+|.+||+++|+++.|+
T Consensus 220 --~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 220 --LYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred --CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0111223457899999999999999999999998763
No 50
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.9e-36 Score=318.06 Aligned_cols=250 Identities=28% Similarity=0.489 Sum_probs=203.8
Q ss_pred cCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecCC
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENG 566 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~g 566 (790)
++|++.++||+|+||.||+|... +..+|+|.++.. ..+.+.+|+.++++++|+|++++++++.+...+++|||++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~ 85 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKG 85 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCC
Confidence 46888999999999999999876 678999988742 346789999999999999999999998777789999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR 646 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 646 (790)
+|.+++.......+++..++.++.+++.||.|||++++ +|+||||+||++++++.++|+|||++.............
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i---~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05070 86 SLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY---IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCccceEEEeCCceEEeCCceeeeeccCcccccccC
Confidence 99999986554568999999999999999999999998 999999999999999999999999998654322222222
Q ss_pred cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 647 LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 647 ~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
..++..|+|||.+.+..++.++|+||||+++|||++ |..||..... ......+.. ..
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~--------------~~ 220 (260)
T cd05070 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--------REVLEQVER--------------GY 220 (260)
T ss_pred CCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHc--------------CC
Confidence 345678999999988899999999999999999999 8888854221 111111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
....+...+..+.+++.+|++.+|++|||++++.+.|..
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 221 RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 112233445679999999999999999999999988864
No 51
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.1e-36 Score=320.08 Aligned_cols=257 Identities=22% Similarity=0.391 Sum_probs=203.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--Cc----eEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GE----KAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~----~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv 559 (790)
++|++.+.||+|+||.||+|.+. ++ .+++|.+... ...++..|+..+.+++||||+++++++.....+++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i 86 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV 86 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence 46778899999999999999874 43 4788887532 23567788889999999999999999887778999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
+||+++|+|.+++.... ..+++..+..++.|++.||+|||+.++ +||||||+|||+++++.+||+|||+++.....
T Consensus 87 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i---iH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 87 TQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHRM---VHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCE---eccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999999997643 368999999999999999999999997 99999999999999999999999999865432
Q ss_pred Ccc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 640 SAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 640 ~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
... ......++..|+|||.+.++.++.++||||||+++|||++ |..||...... .....+....
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~---------~~~~~~~~~~----- 228 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH---------EVPDLLEKGE----- 228 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH---------HHHHHHHCCC-----
Confidence 221 1223456778999999998899999999999999999998 98888543211 0111111110
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccC
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDW 772 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~ 772 (790)
....+......+.+++.+||..+|++|||+.|+++.|..+...+..|
T Consensus 229 --------~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~~~~ 275 (279)
T cd05111 229 --------RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDPPRY 275 (279)
T ss_pred --------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCCcce
Confidence 00111123346788999999999999999999999999887765544
No 52
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.3e-36 Score=317.48 Aligned_cols=251 Identities=28% Similarity=0.491 Sum_probs=205.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecC
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIEN 565 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~ 565 (790)
.++|++.++||+|+||.||+|... ++.+|+|.+... ..+++.+|+.++++++|+|++++++++.++..+++|||+.+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMEN 84 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCC
Confidence 457889999999999999999876 788999998743 34678999999999999999999999877779999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|.+++.......+++.+++.++.+++.||+|||+.++ +|+||||+||+++.++.++|+|||++............
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i---~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~ 161 (260)
T cd05067 85 GSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY---IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTARE 161 (260)
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe---ecccccHHhEEEcCCCCEEEccCcceeecCCCCccccc
Confidence 999999976555578999999999999999999999997 99999999999999999999999999865432222222
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...++..|+|||++....++.++||||||+++|||++ |+.||...... ........ .
T Consensus 162 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~--------------~ 219 (260)
T cd05067 162 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--------EVIQNLER--------------G 219 (260)
T ss_pred CCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHHc--------------C
Confidence 3345678999999998899999999999999999999 99998543211 11111111 1
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.....+...+.++.+++.+||+.+|++||++++++..|+.
T Consensus 220 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 220 YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1111222344679999999999999999999999998875
No 53
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.1e-36 Score=330.17 Aligned_cols=255 Identities=30% Similarity=0.493 Sum_probs=201.4
Q ss_pred hcCcccceeeeecCceEEEEEEEC-------CceEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEec--C
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVE--G 554 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~--~ 554 (790)
.++|++.+.||+|+||.||+|... ++.+|+|+++. ...+.+..|++++.++ +|+||++++++|.. .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357899999999999999999643 36799999863 2335678899999999 89999999998863 3
Q ss_pred eEEEEEEEecCCChhhhhhcCC----------------------------------------------------------
Q 046083 555 SLFLVYEYIENGNLNQHLRGSG---------------------------------------------------------- 576 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 576 (790)
..+++|||+++++|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 4889999999999999886421
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc-ccccccCCCcc
Q 046083 577 -KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV-HTRLVGTFGYM 654 (790)
Q Consensus 577 -~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~ 654 (790)
...++|..+.+++.+++.||+|||++++ +||||||+|||++.++.+||+|||+++.+....... .....++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~i---vHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 1268999999999999999999999997 999999999999999999999999998654322211 22345567899
Q ss_pred chhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHH
Q 046083 655 PPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDS 733 (790)
Q Consensus 655 aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~ 733 (790)
|||++.+..++.++|||||||++|||++ |..||...... ......+.. ......+...
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--------~~~~~~~~~-------------~~~~~~~~~~ 301 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--------EEFCRRLKE-------------GTRMRAPEYA 301 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--------HHHHHHHhc-------------cCCCCCCccC
Confidence 9999999999999999999999999998 99988543211 001111111 0111112234
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 734 VRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 734 ~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
..++.+++.+||+.+|++||++.|++++|.++..
T Consensus 302 ~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 302 TPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 4678999999999999999999999999998754
No 54
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=9.3e-37 Score=325.01 Aligned_cols=262 Identities=25% Similarity=0.357 Sum_probs=205.0
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFL 558 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~l 558 (790)
..++|+++..||+|+||.||.|+.+ |+.+|+|+++.. ..+....|-++|....+|+||+||-.+.+. .+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 5678999999999999999999876 899999999753 445688999999999999999998777654 5999
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
||||++||++..+|...+ .|++.....++.+++-|+..||++|+ |||||||+|+|||..|++||+||||+.-+..
T Consensus 219 iMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~gy---IHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLGY---IHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcCc---ccccCChhheeecCCCCEeeccccccchhhh
Confidence 999999999999998754 69999999999999999999999998 9999999999999999999999999852210
Q ss_pred --------------------CC---c----cc-------------------ccccccCCCccchhcccCCCCCchhhHHH
Q 046083 639 --------------------GS---A----SV-------------------HTRLVGTFGYMPPEYAQYGEVSPKIDVYA 672 (790)
Q Consensus 639 --------------------~~---~----~~-------------------~~~~~gt~~y~aPE~~~~~~~s~~sDvwS 672 (790)
.. . .. ....+|||-|||||++.+..|+..+|+||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 00 0 00 01247999999999999999999999999
Q ss_pred HHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC
Q 046083 673 FGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLR 752 (790)
Q Consensus 673 ~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R 752 (790)
+|||+||||.|-+||....+. ..+..++.+. . .+.......+..+..+||.+|+. ||++|
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~--------~T~rkI~nwr-------~----~l~fP~~~~~s~eA~DLI~rll~-d~~~R 433 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQ--------ETYRKIVNWR-------E----TLKFPEEVDLSDEAKDLITRLLC-DPENR 433 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHHh-------h----hccCCCcCcccHHHHHHHHHHhc-CHHHh
Confidence 999999999999999765432 2222222210 0 01111112334678899999999 99999
Q ss_pred CC---HHHHHHHHHhhccCCccCCcCCcccccccccccc
Q 046083 753 PS---MRAIVVALMTLSSSSEDWDIGSFYENQGLDSLMS 788 (790)
Q Consensus 753 Pt---~~evl~~L~~l~~~~~~~~~~~~~~~~~~~~~~~ 788 (790)
-- ++|| ..+.||..-.|++|.+
T Consensus 434 LG~~G~~EI--------------K~HPfF~~v~W~~l~~ 458 (550)
T KOG0605|consen 434 LGSKGAEEI--------------KKHPFFKGVDWDHLRE 458 (550)
T ss_pred cCcccHHHH--------------hcCCccccCCcchhhc
Confidence 64 3333 3445566666665544
No 55
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.8e-36 Score=318.13 Aligned_cols=252 Identities=27% Similarity=0.512 Sum_probs=206.0
Q ss_pred HhcCcccceeeeecCceEEEEEEEC-CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEY 562 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~ 562 (790)
...+|++.++||+|+||.||+|... +..+++|.+... ...++.+|+++++.++|+|++++++++.+. ..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 3457889999999999999999987 678999998743 346789999999999999999999988754 48999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++.......+++..+++++.+++.||.|||++++ +|+||+|+||++++++.+||+|||++.........
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i---~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNS---IHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 999999999987655678999999999999999999999997 99999999999999999999999999865432211
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
.....++..|+|||.+....++.++||||||+++++|++ |+.||..... ...+....
T Consensus 161 -~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~------------- 218 (261)
T cd05148 161 -SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--------HEVYDQIT------------- 218 (261)
T ss_pred -ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHHH-------------
Confidence 123345678999999998899999999999999999998 8888854321 11111111
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.......+..++..+.+++.+||+.+|.+|||++++++.|+.+
T Consensus 219 -~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 219 -AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 1111222344556789999999999999999999999999753
No 56
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=5.5e-36 Score=314.65 Aligned_cols=250 Identities=29% Similarity=0.477 Sum_probs=203.2
Q ss_pred cCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecCC
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENG 566 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~g 566 (790)
++|.+.+.||+|+||.||+|.+. +..+++|.+... ..+.+.+|++++++++|+|++++++++.+...+++|||+.++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~ 85 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKG 85 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCC
Confidence 45888999999999999999886 457999987643 335688999999999999999999998777789999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR 646 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 646 (790)
+|.++++......+++..+..++.+++.||.|||+.++ +|+||||+||++++++.++|+|||++.............
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i---~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~ 162 (260)
T cd05069 86 SLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY---IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQG 162 (260)
T ss_pred CHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eecccCcceEEEcCCCeEEECCCccceEccCCcccccCC
Confidence 99999986554568999999999999999999999997 999999999999999999999999998654332222222
Q ss_pred cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 647 LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 647 ~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
..++..|+|||...+..++.++||||||+++|||++ |..||..... .......... .
T Consensus 163 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~--------------~ 220 (260)
T cd05069 163 AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN--------REVLEQVERG--------------Y 220 (260)
T ss_pred CccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcC--------------C
Confidence 345678999999998899999999999999999999 8888854321 1111111111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
....+...+..+.+++.+||+.+|++||++++|++.|+.
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 111223445678999999999999999999999998875
No 57
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=4.1e-36 Score=323.28 Aligned_cols=256 Identities=28% Similarity=0.484 Sum_probs=196.8
Q ss_pred cCcccceeeeecCceEEEEEEEC------------------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcce
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR------------------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRL 547 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~------------------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l 547 (790)
++|++.++||+|+||.||++.+. +..+|+|.+... ...+|.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 56888999999999999999753 236999988642 34578999999999999999999
Q ss_pred EEEEec-CeEEEEEEEecCCChhhhhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceee
Q 046083 548 IGYCVE-GSLFLVYEYIENGNLNQHLRGSG-----------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIH 609 (790)
Q Consensus 548 ~g~~~~-~~~~lv~e~~~~g~L~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH 609 (790)
++++.+ ...++||||+++|+|.+++.... ...++|..+++++.|++.||.|||++++ +|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i---vH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNF---VH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc---cc
Confidence 999875 45899999999999999886431 1247889999999999999999999998 99
Q ss_pred cCCCCCCEEecCCCcEEEEEeCCCcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhC--Ccc
Q 046083 610 RDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA--MEA 686 (790)
Q Consensus 610 ~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG--~~p 686 (790)
|||||+|||++.++.+||+|||+++........ ......++..|+|||++..+.++.++||||||+++|||+++ ..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999865432221 12234557889999999988999999999999999999874 455
Q ss_pred ccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 687 VVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
|...... .............. .......+..++..+.+++.+||+.+|++|||+.+|.+.|.
T Consensus 242 ~~~~~~~-----~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDE-----QVIENAGEFFRDQG----------RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHH-----HHHHHHHHHhhhcc----------ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 5432211 11111111111000 00001112344567899999999999999999999998875
No 58
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=6e-36 Score=315.38 Aligned_cols=251 Identities=27% Similarity=0.460 Sum_probs=201.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC-----CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-----GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFL 558 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-----g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~l 558 (790)
.++|++.+.||+|+||.||+|.+. ...+++|.++.. ...+|.+|+.++++++||||+++++++.++ ..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 357899999999999999999875 247899988642 345688999999999999999999988754 5899
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
+|||+++++|.+++..... .+++..+++++.+++.||+|||++++ +|+||||+|||+++++.++|+|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~~i---~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMKYLSEMNY---VHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 9999999999999976432 68999999999999999999999998 9999999999999999999999999987642
Q ss_pred CCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 639 GSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 639 ~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
..... .....++..|+|||.+.+..++.++||||||+++|||++ |..||..... ..........
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--------~~~~~~~~~~------ 224 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--------QDVIKAVEDG------ 224 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--------HHHHHHHHcC------
Confidence 22211 112334678999999998999999999999999999998 9888754321 1111111110
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.....+...+..+.+++.+||+.+|++||+++||++.|.++
T Consensus 225 --------~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 225 --------YRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred --------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 01111233456789999999999999999999999999875
No 59
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.8e-36 Score=320.58 Aligned_cols=261 Identities=27% Similarity=0.359 Sum_probs=198.1
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
++|++.+.||+|+||.||+++.. ++.+|+|+++.. ..+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47899999999999999999986 678999988632 23567889999999999999999998764 56899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|++++.|..+.... ..+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLEEMP--NGVPPEKVRSYIYQLIKAIHWCHKNDI---VHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 99997776554432 358999999999999999999999998 9999999999999999999999999987643333
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh---
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ--- 718 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--- 718 (790)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....... .. ........ +.+...+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~----~~-~~~~~~~~-~~~~~~~~~~~ 229 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID----QL-FTIQKVLG-PLPAEQMKLFY 229 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH----HH-HHHHHhhC-CCCHHHHHhhh
Confidence 23334568999999999998899999999999999999999999986533210 00 00111110 00000000
Q ss_pred ------hhcCCcCCC------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 719 ------RLVDPRLGD------DYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 719 ------~~~d~~l~~------~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....+.... ......+..+.+++.+||+.||++|||++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000000000 0011234578999999999999999999998863
No 60
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.5e-36 Score=324.56 Aligned_cols=242 Identities=27% Similarity=0.405 Sum_probs=199.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|++.+.||+|+||.||+|... ++.+|+|.+... ..+.+.+|++++++++||||+++++++.+ ...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47889999999999999999986 889999998642 23568899999999999999999998775 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++...+ .+++.....++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKEI---VYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 9999999999998654 58899999999999999999999998 99999999999999999999999999865322
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~--------~~~~~~i~~~~--------- 214 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP--------FGIYEKILAGK--------- 214 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCC---------
Confidence 1235689999999999988999999999999999999999999864321 11222222111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPS-----MRAIVVALM 763 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~L~ 763 (790)
..++......+.+++.+||+.||.+||+ ++|++++-+
T Consensus 215 ------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 256 (291)
T cd05612 215 ------LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRW 256 (291)
T ss_pred ------cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcc
Confidence 1122233457889999999999999995 888887654
No 61
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=9.5e-36 Score=369.62 Aligned_cols=271 Identities=25% Similarity=0.431 Sum_probs=211.4
Q ss_pred cCHHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eE
Q 046083 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SL 556 (790)
Q Consensus 480 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~ 556 (790)
++++++. ..|...+.||+|+||.||+|... +..||+|+++.... ....|++.+++++||||++++|+|.+. ..
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~ 758 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-IPSSEIADMGKLQHPNIVKLIGLCRSEKGA 758 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-ccHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence 3444543 35677889999999999999974 78999999864322 223568899999999999999999754 58
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
++||||+++|+|.++++. ++|..+.+++.++++||+|||+...+.++||||||+||+++.++..++. ||.+...
T Consensus 759 ~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~ 832 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLL 832 (968)
T ss_pred EEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccc
Confidence 999999999999999963 8999999999999999999996654556999999999999999988876 6665533
Q ss_pred ccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 637 EVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 637 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
... ....+++.|+|||++.+..++.++|||||||++|||+||+.|+..... .......+....... ..
T Consensus 833 ~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~----~~ 900 (968)
T PLN00113 833 CTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG---VHGSIVEWARYCYSD----CH 900 (968)
T ss_pred ccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC---CCCcHHHHHHHhcCc----cc
Confidence 211 223678999999999999999999999999999999999999843221 122233333332221 23
Q ss_pred hhhhcCCcCCC--CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccC
Q 046083 717 LQRLVDPRLGD--DYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDW 772 (790)
Q Consensus 717 l~~~~d~~l~~--~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~ 772 (790)
...++|+.+.. ..+.++..++.+++.+||+.+|++||||+||++.|+.+...+.+.
T Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~~~ 958 (968)
T PLN00113 901 LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSSSC 958 (968)
T ss_pred hhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccccc
Confidence 44566666543 234567778999999999999999999999999999986655543
No 62
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=329.10 Aligned_cols=241 Identities=27% Similarity=0.456 Sum_probs=198.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|++.+.||+|+||.||+|... ++.+|+|.++.. ..+.+.+|+.++++++||||+++++++.+ +..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56889999999999999999986 788999998643 23568899999999999999999998875 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 98 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKDI---IYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred cCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 9999999999998654 58889999999999999999999998 999999999999999999999999998653221
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
....|++.|+|||++.+..++.++|||||||++|||++|..||..... ......+...
T Consensus 173 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--------~~~~~~i~~~---------- 230 (329)
T PTZ00263 173 ----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--------FRIYEKILAG---------- 230 (329)
T ss_pred ----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--------HHHHHHHhcC----------
Confidence 235689999999999999999999999999999999999999864321 1111222111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPS-----MRAIVVAL 762 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~L 762 (790)
.+ .++......+.+++.+||+.||.+||+ +++++.+-
T Consensus 231 ---~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 231 ---RL--KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred ---Cc--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 11 112223456889999999999999997 68877653
No 63
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=7.4e-36 Score=312.81 Aligned_cols=247 Identities=30% Similarity=0.501 Sum_probs=202.6
Q ss_pred cCcccceeeeecCceEEEEEEECCceEEEEEeChh-hHHHHHHHHHHHHhcCCCCCcceEEEEec--CeEEEEEEEecCC
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQ-ASKEFLAELKVLTHVHHLNLVRLIGYCVE--GSLFLVYEYIENG 566 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~lv~e~~~~g 566 (790)
++|.+.+.||+|+||.||++...+..+++|.++.. ..+.+.+|+.++++++|+|++++++++.. +..+++|||++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~ 85 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 85 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCC
Confidence 46888999999999999999999999999998754 34568999999999999999999997653 4589999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR 646 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 646 (790)
+|.+++.......+++..+++++.+++.||+|||++++ +||||||+||++++++.+||+|||+++...... ..
T Consensus 86 ~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----~~ 158 (256)
T cd05082 86 SLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF---VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DT 158 (256)
T ss_pred cHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eccccchheEEEcCCCcEEecCCccceeccccC----CC
Confidence 99999987655568999999999999999999999997 999999999999999999999999987543221 22
Q ss_pred cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 647 LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 647 ~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
..++..|+|||++....++.++||||||+++|||++ |+.||.... .......... ..
T Consensus 159 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~--------~~~~~~~~~~--------------~~ 216 (256)
T cd05082 159 GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--------LKDVVPRVEK--------------GY 216 (256)
T ss_pred CccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHhc--------------CC
Confidence 334668999999998899999999999999999998 888875321 1111111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
....+...+..+.+++.+||+.+|++|||+.++++.|..+
T Consensus 217 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 217 KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 1122234456789999999999999999999999998753
No 64
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=325.87 Aligned_cols=253 Identities=25% Similarity=0.433 Sum_probs=214.6
Q ss_pred hcCcccceeeeecCceEEEEEEEC----Cc--eEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR----GE--KAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFL 558 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~----g~--~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~l 558 (790)
.+..++.++||.|.||.||+|.+. |+ .||||.-+. +..+.|..|.-+|+.++||||++++|+|.+...|+
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~Wi 467 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWI 467 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeE
Confidence 344567889999999999999874 33 478887653 55678999999999999999999999999999999
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
|||.++-|.|..||+.. +..++......++.|++.||+|||+... |||||..+|||+.....+||+|||+++.++.
T Consensus 468 vmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkrf---VHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKRF---VHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhch---hhhhhhhhheeecCcceeeecccchhhhccc
Confidence 99999999999999875 3578999999999999999999999987 9999999999999999999999999998876
Q ss_pred CCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
......+...-...|||||.+....++.++|||.|||.+||+++ |..||....... .
T Consensus 544 ~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------------V 601 (974)
T KOG4257|consen 544 DAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------------V 601 (974)
T ss_pred cchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------------e
Confidence 55444444445778999999999999999999999999999876 999997654321 1
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
-..++..-+...|+.++..+..|+.+||+.+|.+||++.|+...|+.+.+
T Consensus 602 I~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 602 IGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 11122233346678899999999999999999999999999999887754
No 65
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=5.1e-36 Score=314.22 Aligned_cols=248 Identities=29% Similarity=0.490 Sum_probs=198.8
Q ss_pred cCcccceeeeecCceEEEEEEECC-ceEEEEEeChhh--HHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecC
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELRG-EKAAIKKMDMQA--SKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIEN 565 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~g-~~vavK~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~ 565 (790)
++|++.+.||+|+||.||+|.+.+ ..+|+|.+.... .+++.+|+.++++++||||+++++++.+. ..+++|||+.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 457889999999999999998874 469999887432 46789999999999999999999998754 47999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++..... .+++..+++++.+++.||+|||+.++ +|+||||+||+++.++.+||+|||+++...........
T Consensus 84 ~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05113 84 GCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQF---IHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSV 159 (256)
T ss_pred CcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCe---eccccCcceEEEcCCCCEEECCCccceecCCCceeecC
Confidence 999999976433 68999999999999999999999997 99999999999999999999999998865432221112
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...++..|++||.+.+..++.++||||||+++|||++ |..||...... ..........
T Consensus 160 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--------~~~~~~~~~~------------- 218 (256)
T cd05113 160 GSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--------ETVEKVSQGL------------- 218 (256)
T ss_pred CCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHHHHhcCC-------------
Confidence 2345678999999998889999999999999999998 88887543221 1111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
....+......+.+++.+||+.+|.+||++.++++.|+
T Consensus 219 -~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 219 -RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 01111223467899999999999999999999998763
No 66
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.8e-36 Score=316.48 Aligned_cols=258 Identities=22% Similarity=0.382 Sum_probs=206.2
Q ss_pred hcCcccceeeeecCceEEEEEEEC--Cc----eEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GE----KAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFL 558 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~----~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~l 558 (790)
.++|++.+.||+|+||.||+|.+. +. .||+|.++. ...+++.+|+.++..++|+|++++++++.....++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l 85 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQL 85 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEE
Confidence 457888999999999999999864 43 489998863 23456889999999999999999999998777899
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
+|||+++|+|.++++... ..+++..++.++.|++.||+|||++++ +||||||+|||+++++.+||+|||+++....
T Consensus 86 ~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i---iH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVRL---VHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCe---eccccccceEEEcCCCcEEECCCCceeeccc
Confidence 999999999999997643 358999999999999999999999997 9999999999999999999999999987643
Q ss_pred CCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 639 GSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 639 ~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
..... .....++..|+|||.+.+..++.++||||||+++|||++ |..||..... ... ...+...
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~----~~~~~~~----- 227 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA-----REI----PDLLEKG----- 227 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHH----HHHHHCC-----
Confidence 32211 112234678999999998899999999999999999998 8888754221 001 1111110
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccC
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDW 772 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~ 772 (790)
.....+......+.+++.+||+.||++||++.++++.|..+...+..|
T Consensus 228 --------~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~~~~ 275 (279)
T cd05109 228 --------ERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDPSRF 275 (279)
T ss_pred --------CcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCCcCe
Confidence 011112234457889999999999999999999999999887776554
No 67
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-37 Score=295.09 Aligned_cols=248 Identities=25% Similarity=0.442 Sum_probs=210.0
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLV 559 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv 559 (790)
.++|++++.||+|.||.||.|+.+ +-.+|+|++..+. ..++.+|+++-+.++||||+++|+++.+. ..||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 467899999999999999999987 5689999986543 35689999999999999999999999865 58999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
+||..+|.|...|+......++......++.|+|.||.|+|..++ +||||||+|+|++..+..||+|||-+...+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~V---IhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCc---ccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 999999999999997666679999999999999999999999998 999999999999999999999999987543
Q ss_pred CcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
.......+||.-|++||...+...+...|+|++|++.||++.|.+||..... ...+..+..
T Consensus 176 -~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------~etYkrI~k---------- 236 (281)
T KOG0580|consen 176 -SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------SETYKRIRK---------- 236 (281)
T ss_pred -CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--------HHHHHHHHH----------
Confidence 2233457899999999999999999999999999999999999999965431 112222211
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
-. -.+|........++|.+|+..+|.+|.+..|++.+-+..
T Consensus 237 ---~~--~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 237 ---VD--LKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred ---cc--ccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHH
Confidence 11 123445667789999999999999999999999887643
No 68
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-35 Score=322.85 Aligned_cols=264 Identities=23% Similarity=0.371 Sum_probs=201.7
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
.++|++.+.||+|+||.||++... +..+|+|.+... ..+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 367999999999999999999986 778999988643 34568999999999999999999998764 56899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+++++|.+++.... .+++..+..++.+++.||.|||+.+. ++||||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~--ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCC--EEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 999999999997643 58899999999999999999998641 399999999999999999999999998755321
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHH-HHcCC---------
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE-VLRQP--------- 711 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~-~~~~~--------- 711 (790)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...... .+...... .....
T Consensus 158 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 158 -MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK-----ELEAIFGRPVVDGEEGEPHSISP 231 (331)
T ss_pred -ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHhcccccccccCCccccCc
Confidence 223456899999999999999999999999999999999999998543221 00000000 00000
Q ss_pred ----------------CCh---hhhhhhcCCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 712 ----------------DPR---EDLQRLVDPRLGDDY-PIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 712 ----------------~~~---~~l~~~~d~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
... ..+.+.+........ ......++.+|+.+||+.||++|||++|++++.+-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 000 000011100000111 11345678999999999999999999999987664
No 69
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.4e-36 Score=328.26 Aligned_cols=250 Identities=26% Similarity=0.393 Sum_probs=201.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++|++.+.||+|+||.||+|... ++.+|+|+++.. ..+.+.+|++++..++||||+++++++.++ ..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46899999999999999999986 789999998743 235678899999999999999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++...+ .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELGY---IHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 9999999999997643 58899999999999999999999998 9999999999999999999999999986532
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
......|++.|+|||++.+..++.++|||||||++|||++|..||..... ...+..+.... ..
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~-------~~ 216 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP--------NETWENLKYWK-------ET 216 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH--------HHHHHHHHhcc-------cc
Confidence 22345789999999999999999999999999999999999999865322 11111111110 00
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+..............++.+++.+||+.+|.+||++++++++-.
T Consensus 217 ~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~ 259 (333)
T cd05600 217 LQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPF 259 (333)
T ss_pred ccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcc
Confidence 0000000000134567889999999999999999999997643
No 70
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=7.4e-36 Score=332.00 Aligned_cols=255 Identities=24% Similarity=0.421 Sum_probs=201.4
Q ss_pred hcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcC-CCCCcceEEEEec-Ce
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVH-HLNLVRLIGYCVE-GS 555 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~~ 555 (790)
.++|.+.+.||+|+||.||+|... +..||||+++.. ..+.+.+|+++++++. ||||+++++++.+ +.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 567899999999999999999863 236999998642 2356889999999996 9999999999875 45
Q ss_pred EEEEEEEecCCChhhhhhcCC-----------------------------------------------------------
Q 046083 556 LFLVYEYIENGNLNQHLRGSG----------------------------------------------------------- 576 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 576 (790)
.|+||||+++|+|.++++...
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 899999999999999886421
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC
Q 046083 577 -----------------------------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK 621 (790)
Q Consensus 577 -----------------------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~ 621 (790)
...+++..+.+++.|+++||.|||+.++ +||||||+|||++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---vH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNC---VHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCChHhEEEeC
Confidence 1247888999999999999999999997 99999999999999
Q ss_pred CCcEEEEEeCCCcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccc
Q 046083 622 NFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTG 699 (790)
Q Consensus 622 ~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~ 699 (790)
++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~------ 346 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD------ 346 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh------
Confidence 999999999999865332221 1122456788999999998899999999999999999997 88887543210
Q ss_pred hHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 700 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
......... ......+...+..+.+++.+||+.+|++|||+.+|.+.|.++..
T Consensus 347 --~~~~~~~~~-------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 347 --STFYNKIKS-------------GYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred --HHHHHHHhc-------------CCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 000111111 01111223445678999999999999999999999999997643
No 71
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.3e-35 Score=310.96 Aligned_cols=248 Identities=30% Similarity=0.555 Sum_probs=204.8
Q ss_pred hcCcccceeeeecCceEEEEEEECCceEEEEEeChhh--HHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQA--SKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
.++|++.+.||+|+||.||+|...++.+++|.++... .+++.+|+.++++++|+|++++++++.+ ...++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 3568889999999999999999999999999997543 4678999999999999999999999874 558999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|.+++.......+++..+..++.+++.||.|||++++ +|+||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i---~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~---- 157 (256)
T cd05039 85 GSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNF---VHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD---- 157 (256)
T ss_pred CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc---cchhcccceEEEeCCCCEEEcccccccccccccc----
Confidence 999999987655579999999999999999999999998 9999999999999999999999999986532211
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
....+..|+|||.+....++.++||||||+++|||++ |..||..... ......... .
T Consensus 158 ~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~--------------~ 215 (256)
T cd05039 158 SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--------KDVVPHVEK--------------G 215 (256)
T ss_pred cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHhc--------------C
Confidence 2334668999999998899999999999999999997 9888754321 111111111 1
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.....+...+..+.+++.+||+.+|++|||++|++..|..+
T Consensus 216 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 216 YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 11112233456789999999999999999999999998753
No 72
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=9.9e-36 Score=312.12 Aligned_cols=241 Identities=25% Similarity=0.411 Sum_probs=195.5
Q ss_pred eeeecCceEEEEEEEC----CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecCCC
Q 046083 497 KIGQGGFGAVFYAELR----GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 567 (790)
Q Consensus 497 ~lG~G~fg~Vy~a~~~----g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~g~ 567 (790)
+||+|+||.||+|.+. +..+|+|.++.. ..+++.+|+.+++.++|+||+++++++.+...++||||+++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 6899999999999753 678999988632 3457889999999999999999999998777899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc--cc
Q 046083 568 LNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV--HT 645 (790)
Q Consensus 568 L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~--~~ 645 (790)
|.+++.... .+++..+.+++.|++.||+|||++++ +||||||+||+++.++.+||+|||+++......... ..
T Consensus 82 L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i---~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 82 LNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETNF---VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred HHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCE---eecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 999997543 58999999999999999999999997 999999999999999999999999998664332211 11
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...++..|+|||.+....++.++|+||||+++|||++ |..||...... ..... +. ..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--------~~~~~-i~-------------~~ 214 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--------EVTQM-IE-------------SG 214 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHH-HH-------------CC
Confidence 2234578999999988889999999999999999998 99998643221 11111 11 11
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.....+...+..+.+++.+||+.||++||++.+|.+.|..
T Consensus 215 ~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 215 ERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 1122233455678999999999999999999999999875
No 73
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-36 Score=339.03 Aligned_cols=256 Identities=23% Similarity=0.364 Sum_probs=210.4
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeC---hhhHHHHHHHHHHHHhcC-CCCCcceEE-EEe----cC---
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD---MQASKEFLAELKVLTHVH-HLNLVRLIG-YCV----EG--- 554 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~---~~~~~~~~~E~~~l~~l~-h~niv~l~g-~~~----~~--- 554 (790)
..+.++.+.|.+|||+.||.|.+. +..+|+|++- ....+.+.+|+++|++|+ |+|||.+++ ... ++
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 456788999999999999999986 4899999874 455677899999999996 999999999 332 12
Q ss_pred eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
+.+|+||||.+|.|-++|..+....|++.++++|+.++++|+++||... |||||||||-+||||+.++..||||||.+.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 4789999999999999999766666999999999999999999999998 788999999999999999999999999997
Q ss_pred ccccCCcccc--------cccccCCCccchhcc---cCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHH
Q 046083 635 LTEVGSASVH--------TRLVGTFGYMPPEYA---QYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703 (790)
Q Consensus 635 ~~~~~~~~~~--------~~~~gt~~y~aPE~~---~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 703 (790)
.......... -....|+-|+|||++ .+...++|+|||+|||+||-|+....||+..+..
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l---------- 264 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL---------- 264 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce----------
Confidence 4432221110 012468999999987 5678999999999999999999999999765332
Q ss_pred HHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCc
Q 046083 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770 (790)
Q Consensus 704 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~ 770 (790)
.++.....-.-.......|.+||+.||+.||.+||++-+|+..+.+++...-
T Consensus 265 ---------------aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~ 316 (738)
T KOG1989|consen 265 ---------------AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPC 316 (738)
T ss_pred ---------------eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCC
Confidence 2233232222224678899999999999999999999999999998876544
No 74
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=7.7e-36 Score=312.75 Aligned_cols=247 Identities=28% Similarity=0.465 Sum_probs=197.5
Q ss_pred cCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecC
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIEN 565 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~ 565 (790)
.+|++.+.||+|+||.||++.+. +..+++|.+... ...++.+|++++++++|+||+++++++.+. ..++||||+++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 35778899999999999999886 558999988643 345688999999999999999999988754 58999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|.+++..... .+++..++.++.+++.||+|||+.++ +||||||+||++++++.+||+|||+++...........
T Consensus 84 ~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i---~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~ 159 (256)
T cd05059 84 GCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESNGF---IHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ 159 (256)
T ss_pred CCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCc---ccccccHhhEEECCCCcEEECCcccceecccccccccC
Confidence 999999976433 68999999999999999999999998 99999999999999999999999999865322211111
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...++..|+|||.+.+..++.++||||||+++|||++ |..||...... ........ .
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--------~~~~~~~~--------------~ 217 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--------EVVESVSA--------------G 217 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--------HHHHHHHc--------------C
Confidence 2233457999999998999999999999999999999 78887542211 11111111 1
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
.....+...+.++.+++.+||+.+|++|||+.|+++.|
T Consensus 218 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 218 YRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 11122233456799999999999999999999999876
No 75
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.6e-36 Score=331.62 Aligned_cols=265 Identities=20% Similarity=0.269 Sum_probs=198.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
.++|++.+.||+|+||.||++... ++.+|+|.... ..+.+|++++++++||||+++++++.. ...++++|++.
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~- 166 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK- 166 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-
Confidence 357999999999999999999885 78999997543 356789999999999999999998764 45899999985
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|..++.... .+++..++.++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...........
T Consensus 167 ~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~I---vHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~ 241 (391)
T PHA03212 167 TDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENRI---IHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYY 241 (391)
T ss_pred CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCChHhEEEcCCCCEEEEeCCcccccccccccccc
Confidence 68988887543 58899999999999999999999998 99999999999999999999999999754322222233
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHc---CCC------Chhh
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR---QPD------PRED 716 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~~ 716 (790)
...||+.|+|||++.+..++.++|||||||++|||++|+.|+.......... +.......++. ... ....
T Consensus 242 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~-~~~~~l~~i~~~~g~~p~~~~~~~~~~ 320 (391)
T PHA03212 242 GWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDC-DSDRQIKLIIRRSGTHPNEFPIDAQAN 320 (391)
T ss_pred cccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccC-chhHHHHHHHHHhcCChhhcCcchhHH
Confidence 4679999999999999899999999999999999999998875433211110 00111111111 000 0000
Q ss_pred hhhhc----C-----CcCCCCC--CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 717 LQRLV----D-----PRLGDDY--PIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 717 l~~~~----d-----~~l~~~~--~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+.... . +...... ....+.++.+|+.+||+.||++|||++|++++-+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~ 378 (391)
T PHA03212 321 LDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAA 378 (391)
T ss_pred HHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChh
Confidence 11100 0 0000000 0134567889999999999999999999997554
No 76
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.2e-35 Score=317.12 Aligned_cols=259 Identities=29% Similarity=0.523 Sum_probs=206.2
Q ss_pred hcCcccceeeeecCceEEEEEEEC-------CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLF 557 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~ 557 (790)
.++|.+.+.||+|+||.||++... +..+++|.+.. ...+.+.+|++++++++|||++++++++.++ ..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 357889999999999999999752 34688998864 2345689999999999999999999998754 589
Q ss_pred EEEEEecCCChhhhhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEE
Q 046083 558 LVYEYIENGNLNQHLRGSG-----------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAK 626 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~-----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~k 626 (790)
++|||+++++|.+++...+ ...+++..+++++.|++.||+|||++++ +||||||+|||+++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i---~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHF---VHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecccCcceEEEccCCcEE
Confidence 9999999999999997532 1358999999999999999999999998 9999999999999999999
Q ss_pred EEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHH
Q 046083 627 VADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALF 704 (790)
Q Consensus 627 l~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 704 (790)
|+|||+++....... .......++..|+|||.+.+..++.++||||||++++||++ |..||..... ....
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--------~~~~ 232 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NEVI 232 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHH
Confidence 999999986532221 11223345778999999998899999999999999999998 8888754322 1111
Q ss_pred HHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccC
Q 046083 705 EEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDW 772 (790)
Q Consensus 705 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~ 772 (790)
..+..... ...+...+..+.+++.+||+.+|.+|||+.|+++.|..+...+..|
T Consensus 233 ~~i~~~~~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~~~~ 286 (288)
T cd05093 233 ECITQGRV--------------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKASPVY 286 (288)
T ss_pred HHHHcCCc--------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhcccc
Confidence 22211110 0111223457899999999999999999999999999988776654
No 77
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=293.41 Aligned_cols=257 Identities=23% Similarity=0.355 Sum_probs=204.8
Q ss_pred hcCcccceeeeecCceEEEEEEE--CCceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec------CeEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE------GSLF 557 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~--~g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~~~ 557 (790)
.++|++.++||+|||+-||.++. .++.+|+|++.. ++.+..++|++..++++|||++++++++.. .+.|
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 46899999999999999999984 388899999853 556678999999999999999999987642 2389
Q ss_pred EEEEEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 558 LVYEYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
++++|...|+|.+.++.. ++..+++.++++|+.++++||++||+.. |++.||||||.|||+.+++.++|.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCccc
Confidence 999999999999998753 3457999999999999999999999988 6789999999999999999999999999976
Q ss_pred cccCCccc--------ccccccCCCccchhccc---CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHH
Q 046083 636 TEVGSASV--------HTRLVGTFGYMPPEYAQ---YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALF 704 (790)
Q Consensus 636 ~~~~~~~~--------~~~~~gt~~y~aPE~~~---~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 704 (790)
....-... ......|..|+|||.+. +...++++|||||||+||+|+.|..||....+.. .++.
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G---gSla--- 252 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG---GSLA--- 252 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC---CeEE---
Confidence 54221111 11235789999999985 4567899999999999999999999996543311 0000
Q ss_pred HHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 705 EEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 705 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
-.+..+.+...-....++.+.+++.+|++.||.+||+..+++..+..+
T Consensus 253 -------------LAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 253 -------------LAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -------------EeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 011111111111223667899999999999999999999999998865
No 78
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=8.4e-36 Score=316.28 Aligned_cols=251 Identities=27% Similarity=0.465 Sum_probs=198.5
Q ss_pred HhcCcccceeeeecCceEEEEEEEC-------CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-e
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-S 555 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~ 555 (790)
.+++|++.+.||+|+||.||+|... +..+|+|.+.. ....++.+|+.+++.++|+||+++++++.++ .
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999764 35699998853 2345688999999999999999999988754 5
Q ss_pred EEEEEEEecCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEE
Q 046083 556 LFLVYEYIENGNLNQHLRGSG--------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKV 627 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl 627 (790)
.++||||+++++|.+++.... ...+++..+..++.+++.||.|||+.++ +|+||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCcchheEEEcCCCCEEE
Confidence 899999999999999987532 1246889999999999999999999997 99999999999999999999
Q ss_pred EEeCCCcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHH
Q 046083 628 ADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFE 705 (790)
Q Consensus 628 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 705 (790)
+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||..... .....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--------~~~~~ 232 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--------EQVLR 232 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHH
Confidence 999998754322211 1112345778999999998899999999999999999999 6777754321 11111
Q ss_pred HHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 706 EVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 706 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..... .. ...+...+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 233 ~~~~~-------------~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 233 FVMEG-------------GL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHcC-------------Cc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11111 00 1112234567899999999999999999999999875
No 79
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.1e-35 Score=317.59 Aligned_cols=259 Identities=27% Similarity=0.437 Sum_probs=194.5
Q ss_pred cCcccceeeeecCceEEEEEEEC---CceEEEEEeChh-----hHHHHHHHHHHHHhc---CCCCCcceEEEEe------
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR---GEKAAIKKMDMQ-----ASKEFLAELKVLTHV---HHLNLVRLIGYCV------ 552 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~---g~~vavK~~~~~-----~~~~~~~E~~~l~~l---~h~niv~l~g~~~------ 552 (790)
++|++.+.||+|+||.||+|+.. +..+|+|.++.. ....+.+|+++++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 46889999999999999999873 567999988632 224566777777766 6999999999875
Q ss_pred cCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCC
Q 046083 553 EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGL 632 (790)
Q Consensus 553 ~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGl 632 (790)
+...++||||+. ++|.+++.......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i---iH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRV---VHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCCHHHEEEcCCCCEEEccccc
Confidence 234899999996 599999986555568999999999999999999999998 9999999999999999999999999
Q ss_pred CcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 633 AKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 633 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
++..... .......|++.|+|||.+.+..++.++|||||||++|||++|++||...... +...........+.
T Consensus 157 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-----~~~~~i~~~~~~~~ 229 (290)
T cd07862 157 ARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-----DQLGKILDVIGLPG 229 (290)
T ss_pred eEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-----HHHHHHHHHhCCCC
Confidence 9865432 2223456899999999999889999999999999999999999998654321 11111111111111
Q ss_pred Chhhhhh-------hcCCcCCC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 713 PREDLQR-------LVDPRLGD---DYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 713 ~~~~l~~-------~~d~~l~~---~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
. +.+.. ...+.... ....+....+.+++.+||+.||++|||+.|+++
T Consensus 230 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 230 E-EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred h-hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 1 11100 00000000 001123456789999999999999999999985
No 80
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=5.2e-36 Score=325.38 Aligned_cols=237 Identities=25% Similarity=0.386 Sum_probs=193.3
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g 566 (790)
+.||+|+||.||++... ++.+|+|.++.. ....+.+|++++++++||||+++++++.+ ...++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999875 789999998743 23457789999999999999999998775 4589999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR 646 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 646 (790)
+|.+++...+ .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~i---vHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCDV---VYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKT 154 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---EeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-Ccccc
Confidence 9999997643 58999999999999999999999998 999999999999999999999999987532211 12234
Q ss_pred cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCC
Q 046083 647 LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726 (790)
Q Consensus 647 ~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~ 726 (790)
..|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--------~~~~~~~~~~~--------------- 211 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILMEE--------------- 211 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCC---------------
Confidence 5789999999999999999999999999999999999999854321 11112221110
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 727 DDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 727 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
..++......+.+++.+||+.||++|| ++.+++++
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 212 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 122334456788999999999999999 79998764
No 81
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2e-35 Score=309.99 Aligned_cols=243 Identities=24% Similarity=0.431 Sum_probs=195.1
Q ss_pred eeeecCceEEEEEEEC----CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecCCCh
Q 046083 497 KIGQGGFGAVFYAELR----GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNL 568 (790)
Q Consensus 497 ~lG~G~fg~Vy~a~~~----g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~g~L 568 (790)
.||+|+||.||+|.+. +..+|+|.+... ..+++.+|++++++++|+||+++++++.....++||||+++++|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 4899999999999764 446899988643 23568899999999999999999999887778999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc--cc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH--TR 646 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~--~~ 646 (790)
.+++.... ..+++..+++++.+++.||.|||++++ +||||||+|||++.++.+||+|||++........... ..
T Consensus 82 ~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 82 NKFLSGKK-DEITVSNVVELMHQVSMGMKYLEGKNF---VHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhcCe---eecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 99997542 468999999999999999999999997 9999999999999999999999999986543222111 11
Q ss_pred cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 647 LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 647 ~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
..++..|+|||.+....++.++||||||+++|||++ |..||...... .... .+. ...
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~-~~~-------------~~~ 215 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--------EVMS-FIE-------------QGK 215 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--------HHHH-HHH-------------CCC
Confidence 223578999999988889999999999999999996 99998643221 1111 111 111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
....+...+.++.+++.+||..+|++||++.+|.+.|...
T Consensus 216 ~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 216 RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1223334567889999999999999999999999998764
No 82
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.1e-35 Score=314.27 Aligned_cols=262 Identities=25% Similarity=0.418 Sum_probs=202.8
Q ss_pred cccceeeeecCceEEEEEEE------CCceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec---CeEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAEL------RGEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE---GSLFL 558 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~------~g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~l 558 (790)
|...+.||+|+||.||++.. .+..+|+|.++.. ..+.+.+|++++++++||||+++++++.. ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 37889999999999988753 2668999988642 34668899999999999999999998763 24789
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
+|||+++++|.+++... .+++..+..++.+++.||.|||++++ +||||||+|||+++++.+||+|||+++....
T Consensus 86 v~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i---~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 159 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHY---IHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 159 (283)
T ss_pred EecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCe---eccccChheEEEcCCCcEEEeecccccccCC
Confidence 99999999999999753 48999999999999999999999998 9999999999999999999999999986643
Q ss_pred CCccc--ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 639 GSASV--HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 639 ~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
..... .....++..|+|||.+....++.++||||||+++|||++|..|+........+ ..... ........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~------~~~~~-~~~~~~~~ 232 (283)
T cd05080 160 GHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEE------MIGPK-QGQMTVVR 232 (283)
T ss_pred cchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhh------hhccc-ccccchhh
Confidence 22211 11234566799999999889999999999999999999999997543321100 00000 00011112
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
+.+.++.......+...+..+.+++.+||+.+|++|||++++++.|..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 233 LIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 22233333333334455678999999999999999999999999998764
No 83
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.8e-35 Score=314.75 Aligned_cols=250 Identities=28% Similarity=0.514 Sum_probs=197.6
Q ss_pred cCcccceeeeecCceEEEEEEE------CCceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAEL------RGEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFL 558 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~------~g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~l 558 (790)
++|++.+.||+|+||.||+|.. .+..+++|.+.. ....++.+|++++++++||||+++++++..+ ..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4678899999999999999985 246899999863 2335688999999999999999999988754 5899
Q ss_pred EEEEecCCChhhhhhcCC---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC
Q 046083 559 VYEYIENGNLNQHLRGSG---------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF 623 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~---------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~ 623 (790)
+|||+++++|.+++.... ...+++...+.++.+++.||.|||++++ +||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i---~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFF---VHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCe---ehhccccceEEEcCCC
Confidence 999999999999985321 2357899999999999999999999997 9999999999999999
Q ss_pred cEEEEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchH
Q 046083 624 RAKVADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLV 701 (790)
Q Consensus 624 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~ 701 (790)
.+||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++ |..||..... .
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--------~ 233 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--------Q 233 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--------H
Confidence 999999999986532221 11222345678999999988889999999999999999998 8888754221 0
Q ss_pred HHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 702 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
........ ......+...+..+.+++.+||+.+|++||++.+|.+.|..
T Consensus 234 ~~~~~~~~--------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 234 EVIEMVRK--------------RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHc--------------CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 11111111 10011223345678999999999999999999999998863
No 84
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.9e-35 Score=309.11 Aligned_cols=251 Identities=24% Similarity=0.452 Sum_probs=203.3
Q ss_pred hcCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecC
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIEN 565 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~ 565 (790)
.++|.+.++||+|+||.||++.+. +..+++|.+... ..+.+.+|++++++++|+|++++++++.+...+++|||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAK 84 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCC
Confidence 467889999999999999999875 667999988643 34578899999999999999999999887778999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|.+++.......+++..++.++.+++.||.|||+.++ +|+||+|+||+++.++.+||+|||++............
T Consensus 85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i---~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~ 161 (260)
T cd05073 85 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 161 (260)
T ss_pred CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCc---cccccCcceEEEcCCCcEEECCCcceeeccCCCccccc
Confidence 999999987555568999999999999999999999998 99999999999999999999999999765432222222
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...++..|+|||++....++.++|+||||++++||++ |..||..... ....... ...
T Consensus 162 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~-~~~------------- 219 (260)
T cd05073 162 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEVIRAL-ERG------------- 219 (260)
T ss_pred CCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHH-hCC-------------
Confidence 2345678999999998889999999999999999999 8888854321 1111111 110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.....+...+..+.+++.+|++.+|++||++.++.+.|..
T Consensus 220 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 220 YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0011122344678899999999999999999999999875
No 85
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1.5e-35 Score=310.13 Aligned_cols=246 Identities=32% Similarity=0.542 Sum_probs=202.6
Q ss_pred cCcccceeeeecCceEEEEEEECCceEEEEEeChh-hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecCCCh
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQ-ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNL 568 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~g~L 568 (790)
++|++.+.||+|+||.||++...++.+++|..+.. ..+.+.+|+.++++++|||++++++++.....+++|||+++++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L 85 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNL 85 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCH
Confidence 45888999999999999999988999999998754 34578899999999999999999999887778999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 648 (790)
.+++.......+++..++.++.+++.||.|||+.++ +||||||+||+++.++.+||+|||++....... ....
T Consensus 86 ~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----~~~~ 158 (254)
T cd05083 86 VNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKL---VHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----DNSK 158 (254)
T ss_pred HHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccccCcceEEEcCCCcEEECCCccceeccccC----CCCC
Confidence 999987655568999999999999999999999998 999999999999999999999999987543211 1223
Q ss_pred cCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCC
Q 046083 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGD 727 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~ 727 (790)
.+..|+|||.+.+..++.++|+||||+++|||++ |+.||..... ......... ....
T Consensus 159 ~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~--------------~~~~ 216 (254)
T cd05083 159 LPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--------KEVKECVEK--------------GYRM 216 (254)
T ss_pred CCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--------HHHHHHHhC--------------CCCC
Confidence 4568999999998899999999999999999998 8888854321 111111111 1111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 728 DYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 728 ~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
..+...+..+.+++.+||+.+|++||+++++++.|..
T Consensus 217 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 217 EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 1122345678899999999999999999999998763
No 86
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.4e-35 Score=315.04 Aligned_cols=252 Identities=26% Similarity=0.466 Sum_probs=199.6
Q ss_pred CcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFL 558 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~l 558 (790)
+|++.+.||+|+||.||+|... ...+++|.+... ..+++.+|+.+++.++||||+++++.+.+ +..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999864 246888887532 34568899999999999999999998874 45899
Q ss_pred EEEEecCCChhhhhhcCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCC
Q 046083 559 VYEYIENGNLNQHLRGSG----------------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPAN 616 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~N 616 (790)
+|||+.+++|.+++.... ...+++..++.++.+++.||.|||++++ +||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i---vH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKL---VHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCe---ehhhhhhhe
Confidence 999999999999986421 1358899999999999999999999998 999999999
Q ss_pred EEecCCCcEEEEEeCCCcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCcccccccccc
Q 046083 617 ILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETI 694 (790)
Q Consensus 617 ILl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~ 694 (790)
||+++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-- 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 99999999999999999865332221 1122345678999999988899999999999999999998 8888843221
Q ss_pred ccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 695 TESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
...+. .+........+......+.+++.+||+.+|++||++.|+++.|+++..
T Consensus 236 ------~~~~~--------------~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 ------ERLFN--------------LLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred ------HHHHH--------------HHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11111 111111122233445678999999999999999999999999998754
No 87
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.1e-35 Score=315.65 Aligned_cols=255 Identities=29% Similarity=0.526 Sum_probs=203.6
Q ss_pred cCcccceeeeecCceEEEEEEEC-------CceEEEEEeChhh---HHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFL 558 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~l 558 (790)
.+|.+.+.||+|+||.||++... +..+++|.+.... .+.+.+|++++++++|+||+++++++.++ ..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45788899999999999999753 3458889886432 35688999999999999999999998754 4899
Q ss_pred EEEEecCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCc
Q 046083 559 VYEYIENGNLNQHLRGSG--------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFR 624 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~ 624 (790)
||||+++++|.+++...+ ...+++..+++++.+++.||+|||++++ +||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i---~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF---VHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecccCcceEEEccCCc
Confidence 999999999999997532 1348999999999999999999999998 99999999999999999
Q ss_pred EEEEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHH
Q 046083 625 AKVADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVA 702 (790)
Q Consensus 625 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 702 (790)
++|+|||++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... .
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--------~ 233 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--------E 233 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--------H
Confidence 99999999976543221 11223456788999999998999999999999999999999 99988543221 1
Q ss_pred HHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCC
Q 046083 703 LFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769 (790)
Q Consensus 703 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~ 769 (790)
....+.... ....+...+..+.+++.+||+.+|.+|||+++|++.|..+....
T Consensus 234 ~~~~~~~~~--------------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 234 VIECITQGR--------------VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred HHHHHhCCC--------------CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 111111110 01112234567899999999999999999999999999986543
No 88
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=2e-35 Score=315.47 Aligned_cols=261 Identities=25% Similarity=0.398 Sum_probs=197.1
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~ 562 (790)
++|++.+.||+|+||.||+|... +..+|+|.++.. ....+.+|++++++++||||+++++++... ..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 57899999999999999999876 789999988632 234678999999999999999999988754 58999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++ +|.+++...+ ..+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++.......
T Consensus 85 ~~~-~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~- 158 (288)
T cd07871 85 LDS-DLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRKI---LHRDLKPQNLLINEKGELKLADFGLARAKSVPTK- 158 (288)
T ss_pred CCc-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-
Confidence 985 9999887543 357899999999999999999999998 9999999999999999999999999976432221
Q ss_pred cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC--------
Q 046083 643 VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP-------- 713 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 713 (790)
......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ............+..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK-----EELHLIFRLLGTPTEETWPGITS 233 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCChHHhhcccc
Confidence 1233467899999998865 56899999999999999999999998654321 111111111111110
Q ss_pred hhhhhhhcCCcCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 714 REDLQRLVDPRLGDD----YPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 714 ~~~l~~~~d~~l~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.+.+.....+..... .......++.+++.+||+.||.+|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 234 NEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred chhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 011111111111000 011234567899999999999999999999854
No 89
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.8e-35 Score=314.09 Aligned_cols=249 Identities=29% Similarity=0.521 Sum_probs=200.3
Q ss_pred cCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLF 557 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~ 557 (790)
++|.+.+.||+|+||.||+|... +..+|+|.++.. ..+.+.+|++++++++|+|++++++++..+ ..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 46888899999999999999763 367999998642 346789999999999999999999988754 589
Q ss_pred EEEEEecCCChhhhhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcE
Q 046083 558 LVYEYIENGNLNQHLRGSG------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA 625 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~ 625 (790)
++|||+++++|.++++..+ ...+++..+..++.+++.||+|||++++ +||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i---~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHF---VHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe---eccccccceEEEcCCCeE
Confidence 9999999999999997542 2357899999999999999999999997 999999999999999999
Q ss_pred EEEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHH
Q 046083 626 KVADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVAL 703 (790)
Q Consensus 626 kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 703 (790)
||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|||++ |..||...... ..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--------~~ 233 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--------EV 233 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------HH
Confidence 9999999975432211 11223445788999999999999999999999999999998 99998543221 11
Q ss_pred HHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 704 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
....... .....+...+..+.+++.+||+.||++||++.||++.|.
T Consensus 234 ~~~~~~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 234 IECITQG--------------RLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHHcC--------------CcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1111110 011122234567899999999999999999999999885
No 90
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.1e-35 Score=307.62 Aligned_cols=245 Identities=29% Similarity=0.458 Sum_probs=201.3
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|++.+.||+|++|.||++... ++.+++|.+.. ...+++.+|++++++++|||++++++++.+ +..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999885 78899998753 345678899999999999999999998875 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.++++......+++..+++++.+++.||.|||+.++ +|+||+|+||+++.++.++|+|||+++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i---~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKI---LHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 999999999987645579999999999999999999999998 9999999999999999999999999886543222
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
......|++.|+|||++.+..++.++|+||||+++|||++|+.||..... ..........
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~------------ 216 (256)
T cd08529 157 FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--------GALILKIIRG------------ 216 (256)
T ss_pred hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcC------------
Confidence 12234678899999999999999999999999999999999999864331 1111111111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.....+......+.+++.+||+.+|++||++.++++.
T Consensus 217 --~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 217 --VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1112222445678999999999999999999999874
No 91
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=8.8e-36 Score=325.45 Aligned_cols=241 Identities=23% Similarity=0.365 Sum_probs=197.5
Q ss_pred cCcccceeeeecCceEEEEEEEC---CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR---GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~---g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv 559 (790)
++|.+.+.||+|+||.||+|.+. +..+|+|.+... ..+.+.+|++++..++||||+++++++.++ ..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 46889999999999999999865 257999988532 335688899999999999999999988754 58999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+++|+|.+++.... .+++..+..++.|++.||.|||+.++ +||||||+|||++.++.+||+|||+++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLNI---VYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 99999999999998654 58999999999999999999999998 99999999999999999999999999865322
Q ss_pred CcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
.....||+.|+|||++.+..++.++|||||||++|||++|..||...... .....+...
T Consensus 185 ----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--------~~~~~i~~~--------- 243 (340)
T PTZ00426 185 ----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--------LIYQKILEG--------- 243 (340)
T ss_pred ----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--------HHHHHHhcC---------
Confidence 22357899999999999888999999999999999999999999653221 111122211
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVAL 762 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~L 762 (790)
. ..++......+.+++.+|++.||++|+ ++++++++-
T Consensus 244 ----~--~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp 285 (340)
T PTZ00426 244 ----I--IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHP 285 (340)
T ss_pred ----C--CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCC
Confidence 0 012223345678999999999999995 899887753
No 92
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=3e-35 Score=307.33 Aligned_cols=242 Identities=28% Similarity=0.503 Sum_probs=192.4
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecCCCh
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNL 568 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~g~L 568 (790)
+.||+|+||.||+|... ++.+|+|.... +....+.+|++++++++||||+++++++... ..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999874 78899998753 3346689999999999999999999998754 58999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc-ccc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRL 647 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~-~~~ 647 (790)
.+++...+ ..+++..++.++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++........... ...
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 81 LTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKHC---IHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCc---cccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 99997543 358999999999999999999999998 9999999999999999999999999875432211110 111
Q ss_pred ccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCC
Q 046083 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726 (790)
Q Consensus 648 ~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~ 726 (790)
..+..|+|||.+.++.++.++||||||+++|||++ |..||...... . ....+.....
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--------~--------------~~~~~~~~~~ 214 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--------Q--------------TREAIEQGVR 214 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--------H--------------HHHHHHcCCC
Confidence 23457999999998899999999999999999998 87877542210 0 0111111111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 727 DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 727 ~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
...+...+..+.+++.+|++.+|++|||+.++++.|.
T Consensus 215 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 215 LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 2223344567899999999999999999999999875
No 93
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.7e-35 Score=321.67 Aligned_cols=261 Identities=26% Similarity=0.438 Sum_probs=196.0
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec------CeEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE------GSLF 557 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~~~ 557 (790)
+|++.+.||+|+||.||+|... +..+|||+++. .....+.+|++++++++||||+++++++.. ...|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999875 78999998863 233468899999999999999999998752 2379
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
+||||+. ++|.+++.... .+++..+..++.|+++||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANV---FHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 68999887643 58999999999999999999999998 999999999999999999999999998543
Q ss_pred cCCc--ccccccccCCCccchhcccC--CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC
Q 046083 638 VGSA--SVHTRLVGTFGYMPPEYAQY--GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 638 ~~~~--~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
.... .......|++.|+|||++.+ ..++.++|||||||++|||++|+.||...... ............+.
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~- 228 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-----HQLDLITDLLGTPS- 228 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-----HHHHHHHHHhCCCC-
Confidence 2211 11234578999999999865 67899999999999999999999998643221 01111111111111
Q ss_pred hhhhhh--------h---cCCcCCCCCC---HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 714 REDLQR--------L---VDPRLGDDYP---IDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 714 ~~~l~~--------~---~d~~l~~~~~---~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
...+.. . +.+....... ......+.+++.+||+.||++|||++|++++-.
T Consensus 229 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~ 292 (338)
T cd07859 229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPY 292 (338)
T ss_pred HHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCch
Confidence 000000 0 0010000000 123356789999999999999999999998643
No 94
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.5e-36 Score=329.98 Aligned_cols=252 Identities=23% Similarity=0.327 Sum_probs=200.0
Q ss_pred HHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEE
Q 046083 487 KATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLF 557 (790)
Q Consensus 487 ~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~ 557 (790)
...++|++.+.||+|+||.||++... ++.+|+|.++.. ..+.+.+|+.+++.++||||+++++++.++ ..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34568999999999999999999886 789999998642 224477899999999999999999988754 589
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
+||||+++|+|.+++... .++...+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||++....
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~i---vHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999998753 47888889999999999999999998 999999999999999999999999998654
Q ss_pred cCCcccccccccCCCccchhcccCC----CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC
Q 046083 638 VGSASVHTRLVGTFGYMPPEYAQYG----EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 638 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
...........||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+..+.....
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~~- 264 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGTYSKIMDHKN- 264 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH--------HHHHHHHHcCCC-
Confidence 3322222346799999999998653 478999999999999999999999965321 122222222110
Q ss_pred hhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHHHH
Q 046083 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQL--RPSMRAIVVALM 763 (790)
Q Consensus 714 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~L~ 763 (790)
.+........+..+.+++.+||+.+|.+ ||+++|++.+-.
T Consensus 265 ----------~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 265 ----------SLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred ----------cCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 0100111134567889999999999988 999999987643
No 95
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=5.6e-36 Score=328.88 Aligned_cols=249 Identities=25% Similarity=0.343 Sum_probs=201.2
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|.+.+.||+|+||.||+|... ++.+|+|+++.. ....+..|++++..++|+||+++++++.+ ...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47899999999999999999987 889999998643 33568899999999999999999988775 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++++|.+++... ..+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~gi---iH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGF---IHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999865 358999999999999999999999998 999999999999999999999999998654332
Q ss_pred ----------------------------cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCcccccccc
Q 046083 641 ----------------------------ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692 (790)
Q Consensus 641 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~ 692 (790)
........||+.|+|||.+.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 0112235689999999999999999999999999999999999999965432
Q ss_pred ccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHHHHH
Q 046083 693 TITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS-MRAIVVALM 763 (790)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl~~L~ 763 (790)
......+.... ..+........+..+.+++.+|++ +|.+||+ ++|++++..
T Consensus 236 --------~~~~~~i~~~~-----------~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 236 --------QETYNKIINWK-----------ESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred --------HHHHHHHhccC-----------CcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 11112222110 000000011135678899999998 9999999 999988643
No 96
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.1e-35 Score=328.17 Aligned_cols=255 Identities=24% Similarity=0.452 Sum_probs=200.8
Q ss_pred HhcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcC-CCCCcceEEEEec-C
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVH-HLNLVRLIGYCVE-G 554 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~ 554 (790)
..++|.+.++||+|+||.||+|.+. +..||+|+++.. ..+.+.+|+++|.++. ||||+++++++.. +
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3456778999999999999999864 357999999742 2346889999999997 9999999999875 4
Q ss_pred eEEEEEEEecCCChhhhhhcCC----------------------------------------------------------
Q 046083 555 SLFLVYEYIENGNLNQHLRGSG---------------------------------------------------------- 576 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 576 (790)
..++||||+++|+|.++++...
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 5899999999999999996532
Q ss_pred --------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEE
Q 046083 577 --------------------------------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANIL 618 (790)
Q Consensus 577 --------------------------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NIL 618 (790)
...+++..+++++.+++.||+|||+.++ +||||||+|||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~i---vHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNC---VHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCc---CcccCCcceEE
Confidence 1246788899999999999999999987 99999999999
Q ss_pred ecCCCcEEEEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCcccccccccccc
Q 046083 619 IDKNFRAKVADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITE 696 (790)
Q Consensus 619 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~ 696 (790)
+++++.+||+|||+++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||......
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~--- 348 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN--- 348 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch---
Confidence 99999999999999986432221 11122456788999999998889999999999999999998 88887543211
Q ss_pred ccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 697 STGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 697 ~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
......+ ........+......+.+++.+||+.+|.+||+++||++.|+.+.
T Consensus 349 -----~~~~~~~-------------~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 349 -----EQFYNAI-------------KRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred -----HHHHHHH-------------HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1111111 111111223334567999999999999999999999999998763
No 97
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.9e-35 Score=315.45 Aligned_cols=253 Identities=25% Similarity=0.447 Sum_probs=201.1
Q ss_pred hcCcccceeeeecCceEEEEEEEC-------CceEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEec-Ce
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GS 555 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~ 555 (790)
.++|.+.+.||+|+||.||++... +..+|+|.++. ...+.+.+|+++++++ +|+||+++++++.. +.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357899999999999999999752 34799998864 2345688999999999 79999999998874 45
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
.+++|||+.+|+|.++++......+++.++..++.+++.||+|||++++ +|+||||+|||++.++.++|+|||+++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i---vH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNC---IHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ehhhhccceEEEcCCCeEEECCCccccc
Confidence 8999999999999999986544458999999999999999999999997 9999999999999999999999999986
Q ss_pred cccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCC
Q 046083 636 TEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 636 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||...... ..+.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--------~~~~~~~~---- 258 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--------SKFYKLIK---- 258 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--------HHHHHHHH----
Confidence 5432211 1122345678999999998999999999999999999998 88887543211 11111111
Q ss_pred hhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 714 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.......+.....++.+++.+||+.+|++|||+.|+++.|.++
T Consensus 259 ---------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 259 ---------EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ---------cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111111222345789999999999999999999999999864
No 98
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5e-35 Score=308.32 Aligned_cols=254 Identities=24% Similarity=0.408 Sum_probs=203.2
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|++.+.||+|+||.||+|... ++.+|||.++. .....+.+|++++++++|||++++++++.+ +..+++|
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57899999999999999999875 78999997642 233568899999999999999999998764 5689999
Q ss_pred EEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 561 EYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 561 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
||+++++|.+++... ....+++..+..++.+++.||.|||++++ +|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRV---MHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCe---eCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988642 23458899999999999999999999998 9999999999999999999999999886543
Q ss_pred CCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
... ......+++.|+|||.+.+..++.++|+||||+++|||++|+.||...... .......+...
T Consensus 159 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~------~~~~~~~~~~~-------- 223 (267)
T cd08228 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LFSLCQKIEQC-------- 223 (267)
T ss_pred hhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc------HHHHHHHHhcC--------
Confidence 221 112346788999999999888999999999999999999999998543211 11111111110
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
......+......+.+++.+||+.+|++||++.+|++.|.++.
T Consensus 224 -----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 224 -----DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred -----CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0011112234567899999999999999999999999998764
No 99
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2e-35 Score=317.84 Aligned_cols=265 Identities=27% Similarity=0.389 Sum_probs=196.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYE 561 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e 561 (790)
.++|++.+.||+|+||.||+|... ++.+|+|.++.. ....+.+|+++++.++||||+++++++.+. ..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999985 789999998642 234577899999999999999999988754 5899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+. ++|.+++.... ..+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP-GGLHPENVKLFLFQLLRGLSYIHQRYI---LHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred CCC-cCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 996 58888886543 358889999999999999999999998 999999999999999999999999987543221
Q ss_pred ccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 642 SVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|..||...... .............+. ...+...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~ 232 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI----QDQLERIFLVLGTPN-EDTWPGV 232 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH----HHHHHHHHHHhCCCC-hhhccch
Confidence 12233567899999999865 45889999999999999999999999653221 001111111111110 0000000
Q ss_pred -----cCC-cCCCCCC---------HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 721 -----VDP-RLGDDYP---------IDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 721 -----~d~-~l~~~~~---------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.++ ......+ ......+.+++.+||+.||++|||++|++++-.-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f 291 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF 291 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccc
Confidence 000 0000000 0122467899999999999999999999875554
No 100
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.1e-35 Score=314.49 Aligned_cols=253 Identities=33% Similarity=0.542 Sum_probs=199.2
Q ss_pred cCcccceeeeecCceEEEEEEEC--Cc--eEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GE--KAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~--~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv 559 (790)
++|++.+.||+|+||.||+|... +. .+++|.++. ...+.+.+|++++.++ +||||+++++++.+ +..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57889999999999999999875 32 468887763 2345688999999999 79999999998875 458999
Q ss_pred EEEecCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcE
Q 046083 560 YEYIENGNLNQHLRGSG--------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA 625 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~ 625 (790)
|||+++++|.+++.... ...+++..+..++.|++.||+|||++++ +||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~i---vH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQF---IHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCcCCcceEEECCCCeE
Confidence 99999999999997532 1258899999999999999999999998 999999999999999999
Q ss_pred EEEEeCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHH
Q 046083 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALF 704 (790)
Q Consensus 626 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 704 (790)
||+|||++........ ......+..|+|||++....++.++|||||||++|||++ |..||..... ....
T Consensus 159 kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~--------~~~~ 228 (297)
T cd05089 159 KIADFGLSRGEEVYVK--KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC--------AELY 228 (297)
T ss_pred EECCcCCCccccceec--cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHH
Confidence 9999999874321111 111223557999999988889999999999999999998 9999854321 1111
Q ss_pred HHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCC
Q 046083 705 EEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769 (790)
Q Consensus 705 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~ 769 (790)
.... .......+...+..+.+++.+||+.+|.+|||++++++.|..+...-
T Consensus 229 ~~~~--------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 229 EKLP--------------QGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HHHh--------------cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1111 11111222334567899999999999999999999999998876543
No 101
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-35 Score=321.82 Aligned_cols=237 Identities=25% Similarity=0.391 Sum_probs=192.4
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g 566 (790)
+.||+|+||.||++... +..+|+|.++.. ....+.+|+++++.++||||+++++++.. +..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999875 789999998643 23457789999999999999999998764 4589999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR 646 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 646 (790)
+|..++.... .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDV---VYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKT 154 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHEEEcCCCCEEecccHHhccccCCC-Ccccc
Confidence 9999887643 58999999999999999999999998 999999999999999999999999987532211 12233
Q ss_pred cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCC
Q 046083 647 LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726 (790)
Q Consensus 647 ~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~ 726 (790)
..|++.|+|||++.+..++.++|||||||++|||++|+.||..... .......... .
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--------~~~~~~~~~~-------------~-- 211 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------ERLFELILME-------------E-- 211 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcC-------------C--
Confidence 5689999999999999999999999999999999999999864321 1111111111 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 727 DDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 727 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
..++......+.+++.+||+.||++|| ++.+++++
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 212 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 012233456788999999999999998 88888764
No 102
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4.2e-35 Score=309.62 Aligned_cols=253 Identities=22% Similarity=0.394 Sum_probs=203.7
Q ss_pred cCcccceeeeecCceEEEEEEECC-----ceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELRG-----EKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~g-----~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~ 560 (790)
++|.+.+.||+|+||.||+|.+.. ..+++|.... ...+.+.+|+.++++++|||++++++++.+...++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~ 85 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM 85 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence 458889999999999999998642 3688998763 3345789999999999999999999999888889999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++++|.+++.... ..+++..++.++.+++.||.|||+.++ +|+||||+||+++.++.+||+|||+++......
T Consensus 86 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~---~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 86 ELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRF---VHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCe---eccccChheEEEecCCCeEEccCceeeeccccc
Confidence 9999999999997643 358999999999999999999999997 999999999999999999999999998654332
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
........++..|+|||.+....++.++||||||+++|||++ |..||...... ..........
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--------~~~~~~~~~~-------- 225 (270)
T cd05056 162 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--------DVIGRIENGE-------- 225 (270)
T ss_pred ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHcCC--------
Confidence 222222334568999999988889999999999999999996 99998543221 1111111110
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccC
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~ 768 (790)
....+...+..+.+++.+|+..+|++|||+.+++..|..+...
T Consensus 226 ------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 ------RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0112234456789999999999999999999999999987653
No 103
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.4e-35 Score=311.86 Aligned_cols=262 Identities=25% Similarity=0.435 Sum_probs=200.7
Q ss_pred cCcccceeeeecCceEEEEEEEC------CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEec---CeEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR------GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCVE---GSLF 557 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~------g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~ 557 (790)
++|++.+.||+|+||.||++... +..+++|.+... ..+.+.+|++++++++||||+++++++.. ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888999999999999999742 678999998643 34578899999999999999999998752 3479
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
+||||+++++|.+++.... ..+++..++.++.+++.||+|||++++ +||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~i---~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKRY---VHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCc---eeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999997543 358999999999999999999999998 999999999999999999999999998664
Q ss_pred cCCccc--ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC---
Q 046083 638 VGSASV--HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD--- 712 (790)
Q Consensus 638 ~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 712 (790)
...... .....++..|+|||++.+..++.++||||||+++|||++|..++...... +...+....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----------~~~~~~~~~~~~ 229 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE----------FMRMMGNDKQGQ 229 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh----------hhhhcccccccc
Confidence 322211 11122345699999999889999999999999999999987765332211 000000000
Q ss_pred -ChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 713 -PREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 713 -~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
....+.+.+........+...+..+.+++.+||+.+|++|||+.||++.|..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 230 MIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00111122222111122334556799999999999999999999999999865
No 104
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.9e-35 Score=312.18 Aligned_cols=250 Identities=30% Similarity=0.461 Sum_probs=197.3
Q ss_pred hcCcccceeeeecCceEEEEEEECC-------ceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSL 556 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~g-------~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~ 556 (790)
+++|.+.+.||+|+||.||+|.+.+ ..+++|.+.. .....|..|+.++++++|+||+++++++.+ ...
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4678999999999999999998853 5788998753 223568899999999999999999998764 458
Q ss_pred EEEEEEecCCChhhhhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC---cEEEE
Q 046083 557 FLVYEYIENGNLNQHLRGSGK-----DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF---RAKVA 628 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~-----~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~---~~kl~ 628 (790)
+++|||+++++|.+++..... ..++|..+++++.+++.||+|||++++ +|+||||+|||++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i---vH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHF---IHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccchheEEEeccCCCcceEec
Confidence 999999999999999976431 358999999999999999999999997 9999999999998754 59999
Q ss_pred EeCCCcccccCCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHH
Q 046083 629 DFGLAKLTEVGSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEE 706 (790)
Q Consensus 629 DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 706 (790)
|||+++......... ......+..|+|||++.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--------~~~~~ 233 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--------EVMEF 233 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHH
Confidence 999998653221111 112233568999999998999999999999999999997 88888543211 11111
Q ss_pred HHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 707 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.... .....+...+..+.+++.+||+.+|++||++.+|+++|.
T Consensus 234 ~~~~--------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 234 VTGG--------------GRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHcC--------------CcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 1111 111223344567899999999999999999999999885
No 105
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=325.78 Aligned_cols=248 Identities=24% Similarity=0.400 Sum_probs=207.1
Q ss_pred cccceeeeecCceEEEEEEEC---Cc--eEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR---GE--KAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEY 562 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~---g~--~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~ 562 (790)
..+.++||+|.||.|++|.|+ |+ .||||+++.. ...+|.+|+.+|.+++|+|+++|||+..+....+|||.
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~EL 191 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFEL 191 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhh
Confidence 346789999999999999997 43 5899999743 45789999999999999999999999998888999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
++.|+|.+.|++..+..|-......++.|||.|+.||.+++. |||||..+|+||-....+||+||||.+.+......
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrl---vHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRL---VHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhh---hhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 999999999998556678888899999999999999999998 99999999999999999999999999977544332
Q ss_pred cc-c-ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 643 VH-T-RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 643 ~~-~-~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
.. . ..--...|+|||.+....|+.++|||+|||++|||+| |..||..... -.+-+
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g----------------------~qIL~ 326 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG----------------------IQILK 326 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH----------------------HHHHH
Confidence 21 1 1223568999999999999999999999999999998 5677754322 12223
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.+|..-+-.-|..++++++++++.||..+|++|||+..|.+.+-.
T Consensus 327 ~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 327 NIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred hccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 344333345577899999999999999999999999999854443
No 106
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6.3e-35 Score=308.43 Aligned_cols=249 Identities=26% Similarity=0.444 Sum_probs=195.1
Q ss_pred cccceeeeecCceEEEEEEEC--Cc--eEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-------Ce
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GE--KAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-------GS 555 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~--~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-------~~ 555 (790)
|.+.+.||+|+||.||+|.+. +. .+|+|.++. ...+.+.+|+++++.++|+||+++++++.. ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 356789999999999999876 22 589998753 335678899999999999999999998742 13
Q ss_pred EEEEEEEecCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeC
Q 046083 556 LFLVYEYIENGNLNQHLRGS----GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFG 631 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfG 631 (790)
.+++|||+++|+|.+++... ....+++.....++.|++.||+|||++++ +||||||+|||+++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSF---IHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCe---eccccchhheEEcCCCCEEECCCC
Confidence 68999999999999987432 12358999999999999999999999997 999999999999999999999999
Q ss_pred CCcccccCCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHc
Q 046083 632 LAKLTEVGSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLR 709 (790)
Q Consensus 632 la~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
+++......... .....+++.|++||++.+..++.++||||||+++|||++ |+.||..... .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~~ 229 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--------SEIYDYLRQ 229 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHHHHHc
Confidence 998764322111 122345678999999999999999999999999999999 7888754221 111111111
Q ss_pred CCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 710 QPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 710 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
... ...+...+..+.+++.+||+.+|++|||+.++++.|..+
T Consensus 230 ~~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 GNR--------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC--------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 100 011223445689999999999999999999999999864
No 107
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=5.4e-35 Score=306.98 Aligned_cols=252 Identities=27% Similarity=0.491 Sum_probs=204.0
Q ss_pred HhcCcccceeeeecCceEEEEEEEC-CceEEEEEeCh--hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDM--QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~--~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
..++|++.+.||+|+||.||+|..+ +..+++|.+.. ...+++.+|++++++++|+|++++++++.+ ...+++|||+
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 3467999999999999999999876 56799998874 334679999999999999999999998875 5689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++.......+++..+..++.+++.||.|||++++ +|+||||+||++++++.+||+|||++..........
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i---~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (261)
T cd05034 84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY---IHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA 160 (261)
T ss_pred CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence 99999999987655579999999999999999999999998 999999999999999999999999988654321111
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
.....++..|+|||.+.+..++.++|+||||++++||++ |+.||..... ..........
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--------~~~~~~~~~~------------ 220 (261)
T cd05034 161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--------REVLEQVERG------------ 220 (261)
T ss_pred hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcC------------
Confidence 122334568999999998899999999999999999998 8988853221 1111111111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.....+...+..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 221 --~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 221 --YRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --CCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 0111122335678999999999999999999999998874
No 108
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.4e-35 Score=315.42 Aligned_cols=254 Identities=28% Similarity=0.486 Sum_probs=201.8
Q ss_pred HhcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhc-CCCCCcceEEEEec-C
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-G 554 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~ 554 (790)
..++|++.+.||+|+||.||++... ...+|+|.+... ...++.+|++++.++ +|+||+++++++.+ +
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 4467888999999999999999864 257899988642 234688999999999 89999999998875 4
Q ss_pred eEEEEEEEecCCChhhhhhcC--------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEec
Q 046083 555 SLFLVYEYIENGNLNQHLRGS--------------GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILID 620 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~--------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~ 620 (790)
..+++|||+++|+|.++++.. ....+++..+++++.|++.||.|||++++ +||||||+|||++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i---vH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKC---IHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCc---cccccceeeEEEc
Confidence 589999999999999999642 12468999999999999999999999998 9999999999999
Q ss_pred CCCcEEEEEeCCCcccccCCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCcccccccccccccc
Q 046083 621 KNFRAKVADFGLAKLTEVGSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITEST 698 (790)
Q Consensus 621 ~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~ 698 (790)
.++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------ 240 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV------ 240 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH------
Confidence 99999999999998654322111 122335678999999998899999999999999999998 8888753221
Q ss_pred chHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
......... ......+......+.+++.+||+.+|.+|||+.|+++.|..+.
T Consensus 241 --~~~~~~~~~--------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 241 --EELFKLLKE--------------GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred --HHHHHHHHc--------------CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 111111111 1111223344567899999999999999999999999998764
No 109
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.4e-35 Score=320.49 Aligned_cols=235 Identities=28% Similarity=0.421 Sum_probs=190.7
Q ss_pred eeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCCh
Q 046083 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNL 568 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L 568 (790)
||+|+||.||++... ++.+|+|.++.. ....+.+|++++.+++||||+++++++.+ ...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999986 778999998642 23557889999999999999999998875 468999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 648 (790)
.+++...+ .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... .......
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i---~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG--RFDLSRARFYTAELLCALENLHKFNV---IYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFC 154 (312)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---EeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccccc
Confidence 99997643 58999999999999999999999998 999999999999999999999999998542221 2223457
Q ss_pred cCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCC
Q 046083 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDD 728 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~ 728 (790)
|++.|+|||.+.+..++.++|||||||++|||++|+.||.... ....+....... ..
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~--------~~~~~~~~~~~~---------------~~ 211 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN--------VNEMYRKILQEP---------------LR 211 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC--------HHHHHHHHHcCC---------------CC
Confidence 8999999999999999999999999999999999999986432 112222222211 11
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 046083 729 YPIDSVRKMARLARACTQENPQLRPS---MRAIVVA 761 (790)
Q Consensus 729 ~~~~~~~~l~~li~~Cl~~dP~~RPt---~~evl~~ 761 (790)
++......+.+++.+||+.||.+||+ +.|++.+
T Consensus 212 ~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 212 FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 23334567889999999999999985 5666654
No 110
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.4e-35 Score=313.80 Aligned_cols=249 Identities=25% Similarity=0.419 Sum_probs=198.0
Q ss_pred CcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFL 558 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~l 558 (790)
+|++.+.||+|+||.||+|... +..+|+|+++.. ..+.+..|+.++..++||||+++++++.+ ...++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4677899999999999999864 367999998743 23568899999999999999999999875 45899
Q ss_pred EEEEecCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCc
Q 046083 559 VYEYIENGNLNQHLRGSG--------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFR 624 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~ 624 (790)
++||+.+++|.+++.... ...+++..+.+++.|++.||+|||++++ +||||||+|||+++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi---~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHV---VHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCc---cccccchhheEecCCCc
Confidence 999999999999985321 2358899999999999999999999998 99999999999999999
Q ss_pred EEEEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHH
Q 046083 625 AKVADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVA 702 (790)
Q Consensus 625 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 702 (790)
+||+|||+++....... .......+++.|+|||.+.++.++.++||||||+++|||++ |..||..... ..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~ 234 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------QD 234 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------HH
Confidence 99999999886532221 11123345779999999988899999999999999999998 7777754221 11
Q ss_pred HHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 703 LFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 703 ~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
....+... . ....+.+.+..+.+++.+||+.+|++||++++|++.|..
T Consensus 235 ~~~~i~~~-------------~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 235 VIEMIRNR-------------Q-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHcC-------------C-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 12222111 1 112234456678999999999999999999999998864
No 111
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3e-35 Score=313.54 Aligned_cols=247 Identities=26% Similarity=0.381 Sum_probs=198.6
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
+|+..+.||+|+||.||++... ++.+|+|.+.... ...+.+|++++++++||||+++++.+.+ ...++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788999999999999999875 7899999986432 2346789999999999999999998875 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+++|+|.+++.......+++..+..++.|++.||.|||+.++ +||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI---VYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc---EecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 9999999998876544569999999999999999999999998 9999999999999999999999999986532221
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
.....|+..|+|||.+.+..++.++|||||||++|||++|+.||...... ......... +
T Consensus 158 --~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-----~~~~~~~~~-------------~ 217 (285)
T cd05605 158 --IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-----VKREEVERR-------------V 217 (285)
T ss_pred --cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-----hHHHHHHHH-------------h
Confidence 22346899999999999889999999999999999999999999653221 000011111 1
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
.. ....++...+..+.+++.+||+.||.+|| ++++++++
T Consensus 218 ~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 218 KE-DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred hh-cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 10 01122334556788999999999999999 78888665
No 112
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.6e-35 Score=306.34 Aligned_cols=243 Identities=26% Similarity=0.442 Sum_probs=196.5
Q ss_pred eeeeecCceEEEEEEEC--C---ceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecCC
Q 046083 496 NKIGQGGFGAVFYAELR--G---EKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g---~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~g 566 (790)
++||+|+||.||+|.+. + ..+++|.+... ..+++.+|+++++.+.|+|++++++++.....+++|||++++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 47999999999999864 2 57999998643 345688999999999999999999998877789999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc-
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT- 645 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~- 645 (790)
+|.+++.... .+++..++.++.|++.||+|||+.++ +|+||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i---~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 81 PLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHF---VHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred cHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCe---eccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 9999998654 58999999999999999999999997 99999999999999999999999999866433322111
Q ss_pred -ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 646 -RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 646 -~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
...++..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+... .
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--------~~~~~~~~~~-~----------- 215 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--------AEVIAMLESG-E----------- 215 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcC-C-----------
Confidence 1223567999999998899999999999999999998 9999854321 1111111111 0
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
....+...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 216 --~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 216 --RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred --cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 0112233446789999999999999999999999999875
No 113
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.4e-35 Score=315.14 Aligned_cols=256 Identities=34% Similarity=0.576 Sum_probs=200.7
Q ss_pred cCcccceeeeecCceEEEEEEEC--Cc--eEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GE--KAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~--~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv 559 (790)
++|++.+.||+|+||.||+|.+. +. .+++|.++. ...+.+.+|++++.++ +|+||+++++++.+ +..+++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 57888999999999999999875 33 457777653 2345688899999999 89999999999875 458999
Q ss_pred EEEecCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcE
Q 046083 560 YEYIENGNLNQHLRGSG--------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA 625 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~ 625 (790)
|||+++++|.++++..+ ...+++.+++.++.|++.||+|||++++ +||||||+|||++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi---~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCc---cccccchheEEecCCCcE
Confidence 99999999999997542 1358899999999999999999999998 999999999999999999
Q ss_pred EEEEeCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHH
Q 046083 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALF 704 (790)
Q Consensus 626 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 704 (790)
||+|||+++....... .....++..|+|||.+....++.++|||||||++|||+| |..||..... ....
T Consensus 164 kl~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~ 233 (303)
T cd05088 164 KIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELY 233 (303)
T ss_pred EeCccccCcccchhhh--cccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh--------HHHH
Confidence 9999999874321111 111234567999999988889999999999999999998 9999854321 1111
Q ss_pred HHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccC
Q 046083 705 EEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDW 772 (790)
Q Consensus 705 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~ 772 (790)
.... .......+......+.+++.+||+.+|++||+++++++.|..+......|
T Consensus 234 ~~~~--------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~~~ 287 (303)
T cd05088 234 EKLP--------------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTY 287 (303)
T ss_pred HHHh--------------cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhhhh
Confidence 1111 11111122233456889999999999999999999999999876555544
No 114
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.1e-35 Score=319.65 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=196.0
Q ss_pred CcccceeeeecCceEEEEEEE-----CCceEEEEEeChh-------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeE
Q 046083 491 DFSMGNKIGQGGFGAVFYAEL-----RGEKAAIKKMDMQ-------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSL 556 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~-----~g~~vavK~~~~~-------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~ 556 (790)
+|++.+.||+|+||.||+++. .+..+|+|.+... ..+.+..|++++.++ +|+||+++++++.+ +..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 588899999999999999876 2678999998642 234578899999999 59999999988764 458
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i---vHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLGI---VYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCc---EecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 99999999999999997643 58999999999999999999999998 99999999999999999999999999865
Q ss_pred ccCCcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 637 EVGSASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 637 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
............||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ............
T Consensus 156 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----~~~~~~~~~~~~----- 226 (332)
T cd05614 156 LSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN----TQSEVSRRILKC----- 226 (332)
T ss_pred cccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC----CHHHHHHHHhcC-----
Confidence 43333333346789999999999865 47889999999999999999999996432210 111111111111
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHHH
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVAL 762 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~L 762 (790)
++ ..+......+.+++.+||+.||++|| ++++++++-
T Consensus 227 ------~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~ 268 (332)
T cd05614 227 ------DP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHP 268 (332)
T ss_pred ------CC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCC
Confidence 11 12233456788999999999999999 777887653
No 115
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.6e-35 Score=310.42 Aligned_cols=254 Identities=24% Similarity=0.404 Sum_probs=203.1
Q ss_pred hcCcccceeeeecCceEEEEEEECC------ceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec--CeE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELRG------EKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE--GSL 556 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~g------~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~ 556 (790)
.++|.+.+.||+|+||.||+|.... ..+++|.+.. ...+.+.+|+.++++++|+|++++++++.+ ...
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 5678999999999999999998753 6788998763 334568899999999999999999998875 458
Q ss_pred EEEEEEecCCChhhhhhcCCC------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEe
Q 046083 557 FLVYEYIENGNLNQHLRGSGK------DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADF 630 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~Df 630 (790)
++++||+++++|.+++..... ..+++..++.++.+++.||+|||++++ +|+||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i---~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGV---IHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccCHhhEEEcCCCcEEECCC
Confidence 999999999999999875321 468999999999999999999999997 99999999999999999999999
Q ss_pred CCCcccccCCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHH
Q 046083 631 GLAKLTEVGSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVL 708 (790)
Q Consensus 631 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
|+++.+....... .....++..|+|||++.+..++.++||||||+++||+++ |+.||..... ........
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~ 233 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--------FEMAAYLK 233 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--------HHHHHHHH
Confidence 9998654322211 122345678999999998889999999999999999999 9999854321 11111111
Q ss_pred cCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhcc
Q 046083 709 RQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSS 767 (790)
Q Consensus 709 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~ 767 (790)
.. .....+..++..+.+++.+||+.+|++|||+.++++.|..+..
T Consensus 234 ~~--------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 234 DG--------------YRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred cC--------------CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 11 0011122344678999999999999999999999999988653
No 116
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=336.20 Aligned_cols=253 Identities=26% Similarity=0.383 Sum_probs=202.5
Q ss_pred HHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC--
Q 046083 484 ELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-- 554 (790)
Q Consensus 484 ~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-- 554 (790)
+.....++|.+.+.||+|+||.||+|... ++.+|||.++. .....+.+|+..+..++|+|+++++..+...
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 34445679999999999999999999874 88999999853 2345688899999999999999988765321
Q ss_pred -------eEEEEEEEecCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcE
Q 046083 555 -------SLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA 625 (790)
Q Consensus 555 -------~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~ 625 (790)
..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+.++ +||||||+|||++.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~I---iHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHM---IHRDIKSANILLCSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEEEeCCCCE
Confidence 2579999999999999987532 3468999999999999999999999997 999999999999999999
Q ss_pred EEEEeCCCcccccCC-cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHH
Q 046083 626 KVADFGLAKLTEVGS-ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALF 704 (790)
Q Consensus 626 kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 704 (790)
||+|||+++.+.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ....
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~--------~~~~ 254 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM--------EEVM 254 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--------HHHH
Confidence 999999998654321 1222346789999999999999999999999999999999999999854321 1122
Q ss_pred HHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 705 EEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 705 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...... . ....+...+..+.+++.+||+.+|.+||++.+++.+
T Consensus 255 ~~~~~~-------------~-~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 255 HKTLAG-------------R-YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHhcC-------------C-CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 222111 0 011233445678999999999999999999999864
No 117
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.9e-35 Score=333.93 Aligned_cols=245 Identities=24% Similarity=0.375 Sum_probs=197.0
Q ss_pred CcccceeeeecCceEEEEEEEC---CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR---GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~---g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
.|.+.+.||+|+||.||+|... ++.+++|.+.. .....+.+|+++++.++||||+++++++.. +..|+||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 3888999999999999999764 56788887643 223457889999999999999999998874 5689999999
Q ss_pred cCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 564 ENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 564 ~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
++|+|.+++... ...++++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i---vHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKM---MHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCE---EECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988642 23468999999999999999999999997 9999999999999999999999999986543221
Q ss_pred -ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 642 -SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 642 -~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..........
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~--------~~~~~~~~~~---------- 286 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ--------REIMQQVLYG---------- 286 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC----------
Confidence 123345789999999999999999999999999999999999999854321 1112222111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
.. ...+......+.+++.+||+.+|++||++++++.
T Consensus 287 ---~~-~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 287 ---KY-DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---CC-CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 00 1122234467899999999999999999999875
No 118
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=7e-35 Score=317.79 Aligned_cols=262 Identities=24% Similarity=0.399 Sum_probs=198.9
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
.++|++.++||+|+||.||++... +..+|+|.+... ..+.+.+|++++++++|+||+++++++.+ +..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 367999999999999999999986 778899987642 33568899999999999999999998874 56899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH-TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
|+++++|.+++...+ .+++..+..++.+++.||.|||+. ++ +|+||||+|||++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~i---vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~- 157 (333)
T cd06650 84 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS- 157 (333)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCE---EecCCChhhEEEcCCCCEEEeeCCcchhhhhh-
Confidence 999999999997643 488999999999999999999985 55 99999999999999999999999998754321
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcC----------
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQ---------- 710 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 710 (790)
......|+..|+|||++.+..++.++|||||||++|||++|+.||....... ...........
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKE-----LELMFGCPVEGDPAESETSPR 230 (333)
T ss_pred --ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhH-----HHHHhcCcccCCccccccCcc
Confidence 1223568999999999998899999999999999999999999986432210 00000000000
Q ss_pred --------------CCChh---hhhhhcCCcCCCCCC-HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 711 --------------PDPRE---DLQRLVDPRLGDDYP-IDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 711 --------------~~~~~---~l~~~~d~~l~~~~~-~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..+.. .+...+........+ .....++.+++.+||+.||++|||++|++.+-.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~ 301 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAF 301 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHH
Confidence 00000 000000000000111 113456889999999999999999999987655
No 119
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.5e-35 Score=314.54 Aligned_cols=257 Identities=26% Similarity=0.473 Sum_probs=202.9
Q ss_pred hcCcccceeeeecCceEEEEEEEC---------CceEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEec-
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR---------GEKAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVE- 553 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~---------g~~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~- 553 (790)
.++|.+.+.||+|+||.||++... +..+++|.+.. ...+++.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 456788999999999999999742 34689998863 2345688999999999 89999999998875
Q ss_pred CeEEEEEEEecCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEe
Q 046083 554 GSLFLVYEYIENGNLNQHLRGSG--------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILI 619 (790)
Q Consensus 554 ~~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl 619 (790)
...+++|||+.+|+|.+++.... ...+++..+++++.|++.||.|||++++ +||||||+|||+
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~gi---vH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKC---IHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCe---eecccccceEEE
Confidence 45899999999999999997532 1357899999999999999999999998 999999999999
Q ss_pred cCCCcEEEEEeCCCcccccCCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccc
Q 046083 620 DKNFRAKVADFGLAKLTEVGSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITES 697 (790)
Q Consensus 620 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~ 697 (790)
++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~------ 244 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------ 244 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC------
Confidence 999999999999998664322211 122345678999999998889999999999999999998 777764321
Q ss_pred cchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCc
Q 046083 698 TGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770 (790)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~ 770 (790)
........... .....+...+..+.+++.+||+.+|.+|||+.|+++.|.++...+.
T Consensus 245 --~~~~~~~~~~~--------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~ 301 (304)
T cd05101 245 --VEELFKLLKEG--------------HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT 301 (304)
T ss_pred --HHHHHHHHHcC--------------CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence 11112111111 1111223455678999999999999999999999999998766544
No 120
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.7e-35 Score=320.41 Aligned_cols=237 Identities=25% Similarity=0.401 Sum_probs=192.9
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g 566 (790)
+.||+|+||.||++... +..+|+|.+... ....+.+|+++++.++||||+++++++.+ +..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999875 789999998642 33567889999999999999999988774 4589999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR 646 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 646 (790)
+|.+++.... .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~i---vHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGKI---VYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMKT 154 (328)
T ss_pred CHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---EecccCHHHeEECCCCcEEEecCcCCccCCCcc-ccccc
Confidence 9999887643 58999999999999999999999998 999999999999999999999999987532211 12234
Q ss_pred cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCC
Q 046083 647 LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726 (790)
Q Consensus 647 ~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~ 726 (790)
..|++.|+|||++.+..++.++|||||||++|||++|+.||..... .......... +
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~--------~~~~~~~~~~-----------~---- 211 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILME-----------D---- 211 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH--------HHHHHHhccC-----------C----
Confidence 5789999999999988999999999999999999999999864321 1111111111 0
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 727 DDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 727 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
..++......+.+++.+||+.||++|| +++|++++
T Consensus 212 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 212 IKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred ccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 112333456788999999999999997 89998875
No 121
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4e-35 Score=316.07 Aligned_cols=254 Identities=27% Similarity=0.474 Sum_probs=200.9
Q ss_pred cCcccceeeeecCceEEEEEEEC---------CceEEEEEeChh----hHHHHHHHHHHHHhc-CCCCCcceEEEEec-C
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR---------GEKAAIKKMDMQ----ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-G 554 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~---------g~~vavK~~~~~----~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~ 554 (790)
++|.+.+.||+|+||.||++... ...+|+|.++.. ...++.+|++++..+ +|+||+++++++.+ +
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 56899999999999999999753 246999998742 335688899999999 79999999998875 4
Q ss_pred eEEEEEEEecCCChhhhhhcCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEec
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGK--------------DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILID 620 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~ 620 (790)
..++||||+.+|+|.+++..... ..+++.++++++.|++.||+|||++++ +||||||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi---~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKC---IHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCc---ccccccHHheEEc
Confidence 58999999999999999975421 358999999999999999999999998 9999999999999
Q ss_pred CCCcEEEEEeCCCcccccCCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCcccccccccccccc
Q 046083 621 KNFRAKVADFGLAKLTEVGSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITEST 698 (790)
Q Consensus 621 ~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~ 698 (790)
.++.+||+|||+++......... .....++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~------ 248 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV------ 248 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH------
Confidence 99999999999987553221111 111234568999999998889999999999999999998 7788743211
Q ss_pred chHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccC
Q 046083 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768 (790)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~ 768 (790)
....... . .......+.....++.+++.+||+.+|.+|||+.+|++.|..+...
T Consensus 249 --~~~~~~~-~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 249 --EELFKLL-K-------------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred --HHHHHHH-H-------------cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 1111111 1 1111122334556888999999999999999999999999987654
No 122
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.3e-36 Score=307.05 Aligned_cols=244 Identities=23% Similarity=0.408 Sum_probs=205.9
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLV 559 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv 559 (790)
..+|++.+.||+|.||.|-+|... |+.||||.++... .-.+.+|++||+.++||||+.+|.+|.+. .+.+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 457888999999999999999874 9999999886533 23478999999999999999999999864 58999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||..+|.|++|+...+ .|++.+..++++||..|+.|+|.+++ +|||||.+|||||+++++||+|||++.++..
T Consensus 132 MEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrV---vHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRV---VHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccc---eecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 99999999999998765 59999999999999999999999998 9999999999999999999999999988753
Q ss_pred CcccccccccCCCccchhcccCCCC-CchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
....+.++|++-|.+||...+..| .+..|-|||||+||-|+.|.-||... +...++.++-+...
T Consensus 206 -~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~--------Dhk~lvrQIs~GaY------ 270 (668)
T KOG0611|consen 206 -KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR--------DHKRLVRQISRGAY------ 270 (668)
T ss_pred -ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc--------hHHHHHHHhhcccc------
Confidence 334567899999999999999887 57899999999999999999998643 33334444333211
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.+| ..+....-||++||..+|++|-|+++|..+-|
T Consensus 271 --rEP--------~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 271 --REP--------ETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred --cCC--------CCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 111 22234667999999999999999999998876
No 123
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.7e-35 Score=326.86 Aligned_cols=255 Identities=22% Similarity=0.321 Sum_probs=199.8
Q ss_pred HHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-
Q 046083 484 ELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG- 554 (790)
Q Consensus 484 ~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~- 554 (790)
.+....++|++.+.||+|+||.||++... ++.+|+|.+... ..+.+.+|+.+++.++||||+++++++.++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 34445678999999999999999999986 778999998632 234578899999999999999999988754
Q ss_pred eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
..|+||||+++|+|.+++... .+++..+..++.|++.||+|||++++ +||||||+|||+++++.+||+|||++.
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~I---vHrDLKp~NILl~~~~~~kL~DFG~a~ 190 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGL---IHRDVKPDNMLLDKHGHLKLADFGTCM 190 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHEEECCCCCEEEEecccce
Confidence 589999999999999999753 47889999999999999999999998 999999999999999999999999998
Q ss_pred ccccCCcccccccccCCCccchhcccCC----CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcC
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYG----EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQ 710 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 710 (790)
..............||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ......+...
T Consensus 191 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~--------~~~~~~i~~~ 262 (370)
T cd05621 191 KMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL--------VGTYSKIMDH 262 (370)
T ss_pred ecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC
Confidence 7643332223346799999999998754 378899999999999999999999964321 1122222221
Q ss_pred CCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHHHH
Q 046083 711 PDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQL--RPSMRAIVVALM 763 (790)
Q Consensus 711 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~L~ 763 (790)
.. .+...........+.+++..|++.++.+ ||++.|++++-+
T Consensus 263 ~~-----------~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 263 KN-----------SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred Cc-----------ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 10 0000111123556788999999865544 899999998754
No 124
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1e-35 Score=324.09 Aligned_cols=248 Identities=23% Similarity=0.308 Sum_probs=198.5
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|.+.+.||+|+||.||++... ++.+|+|.++.. ..+.+.+|+.+++.++|+||+++++++.+ ...++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47899999999999999999875 789999998743 23458889999999999999999988775 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+.++ +||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~i---~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-DQFDEDMAQFYLAELVLAIHSVHQMGY---VHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe---EcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 9999999999998652 368999999999999999999999998 999999999999999999999999998664433
Q ss_pred cccccccccCCCccchhccc------CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQ------YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~------~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
........|++.|+|||++. ...++.++|||||||++|||++|+.||..... ...+..+.....
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--------~~~~~~i~~~~~-- 226 (330)
T cd05601 157 MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS--------AKTYNNIMNFQR-- 226 (330)
T ss_pred ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH--------HHHHHHHHcCCC--
Confidence 32233457899999999986 45678999999999999999999999864321 112222221100
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.+...........+.+++..|++ +|.+|||+++++.+
T Consensus 227 ---------~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 ---------FLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ---------ccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 00001111344678899999998 99999999999865
No 125
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.1e-35 Score=307.96 Aligned_cols=249 Identities=25% Similarity=0.451 Sum_probs=197.5
Q ss_pred cccceeeeecCceEEEEEEEC-----CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecCe------
Q 046083 492 FSMGNKIGQGGFGAVFYAELR-----GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGS------ 555 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~-----g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~------ 555 (790)
|.+.+.||+|+||.||+|... +..+|+|.++.. ..+.+.+|++.++.++|+|++++++++.+..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567899999999999999874 257999988632 2356889999999999999999999875322
Q ss_pred -EEEEEEEecCCChhhhhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEe
Q 046083 556 -LFLVYEYIENGNLNQHLRGS----GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADF 630 (790)
Q Consensus 556 -~~lv~e~~~~g~L~~~l~~~----~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~Df 630 (790)
.+++|||+++|+|..++... ....+++..+..++.|++.||.|||++++ +||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i---~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNF---IHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCe---eccccchheEEECCCCeEEECCc
Confidence 68999999999999988542 22468999999999999999999999997 99999999999999999999999
Q ss_pred CCCcccccCCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHH
Q 046083 631 GLAKLTEVGSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVL 708 (790)
Q Consensus 631 Gla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
|+++......... .....++..|+|||.+....++.++||||||+++|||++ |..||..... ........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--------~~~~~~~~ 229 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--------HEIYDYLR 229 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHH
Confidence 9998664332211 111234678999999988899999999999999999999 8888744221 11122221
Q ss_pred cCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 709 RQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 709 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
... ....+......+.+++.+||+.||.+|||+.|+++.|.++
T Consensus 230 ~~~--------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 HGN--------------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred cCC--------------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 110 1112334556789999999999999999999999999875
No 126
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=8.3e-35 Score=305.82 Aligned_cols=247 Identities=25% Similarity=0.404 Sum_probs=198.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh--------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFL 558 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~l 558 (790)
++|.+.+.||+|++|.||++... +..+++|.+... ..+.+.+|++++++++||||+++++++.+ ...++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57889999999999999999864 789999987531 23468889999999999999999999875 45899
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
+|||+++++|.+++.... .+++..+.+++.+++.||.|||+.++ +|+||+|+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i---~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNMI---VHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 999999999999997643 58899999999999999999999998 9999999999999999999999999976533
Q ss_pred CCcccc--cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 639 GSASVH--TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 639 ~~~~~~--~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
...... ....++..|+|||.+.+..++.++||||||+++|||++|+.||...... .......
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~-------- 220 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM--------AAIFKIA-------- 220 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH--------HHHHHHh--------
Confidence 221111 2345788999999999988999999999999999999999998543210 1111111
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
........+......+.+++.+||+.+|.+|||+.+++++.
T Consensus 221 -----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 221 -----TQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred -----ccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 11111223334456788999999999999999999998753
No 127
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=4.9e-35 Score=320.46 Aligned_cols=256 Identities=28% Similarity=0.466 Sum_probs=198.8
Q ss_pred hcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhc-CCCCCcceEEEEec--C
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHV-HHLNLVRLIGYCVE--G 554 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l-~h~niv~l~g~~~~--~ 554 (790)
.++|++.+.||+|+||.||+|.+. ++.+|||.++.. ....+.+|+.++.++ +|+||+++++++.. .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 457899999999999999999742 568999998642 235688899999999 68999999998764 3
Q ss_pred eEEEEEEEecCCChhhhhhcCC----------------------------------------------------------
Q 046083 555 SLFLVYEYIENGNLNQHLRGSG---------------------------------------------------------- 576 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 576 (790)
..+++|||+++|+|.++++...
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 4789999999999999986421
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc-cccccc
Q 046083 577 -------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLV 648 (790)
Q Consensus 577 -------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~ 648 (790)
...+++..+.+++.|+++||+|||++++ +||||||+|||+++++.+||+|||++......... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKC---IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 1236888999999999999999999998 99999999999999999999999999865322111 112234
Q ss_pred cCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCC
Q 046083 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGD 727 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~ 727 (790)
++..|+|||.+.+..++.++||||||+++|||++ |..||...... .......... ...
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~~-------------~~~ 301 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------EEFCRRLKEG-------------TRM 301 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--------HHHHHHHhcc-------------CCC
Confidence 5678999999998899999999999999999997 88887542211 0011111110 001
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccC
Q 046083 728 DYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768 (790)
Q Consensus 728 ~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~ 768 (790)
..+......+.+++..||+.+|++|||+.||+++|..+.+.
T Consensus 302 ~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 302 RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 11112234688999999999999999999999999987654
No 128
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.5e-35 Score=322.57 Aligned_cols=196 Identities=27% Similarity=0.416 Sum_probs=169.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++|++.+.||+|+||.||++... ++.+|+|.++.. ....+.+|++++.+++|+||+++++.+.+. ..|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47899999999999999999875 789999998642 224578899999999999999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~gi---vHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLGF---IHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---EecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 9999999999998643 58999999999999999999999998 999999999999999999999999987543211
Q ss_pred c----------------------------------ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCcc
Q 046083 641 A----------------------------------SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEA 686 (790)
Q Consensus 641 ~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p 686 (790)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0 001234799999999999999999999999999999999999999
Q ss_pred cccc
Q 046083 687 VVKT 690 (790)
Q Consensus 687 ~~~~ 690 (790)
|...
T Consensus 236 f~~~ 239 (363)
T cd05628 236 FCSE 239 (363)
T ss_pred CCCC
Confidence 9643
No 129
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.3e-35 Score=325.80 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=196.5
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++|++.+.||+|+||.||+++.. ++.+|||++... ..+.+.+|++++..++||||+++++++.++ ..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47899999999999999999985 789999998743 234578899999999999999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||++..+....
T Consensus 81 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~i---vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLGY---IHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999999997644 58999999999999999999999998 999999999999999999999999987543211
Q ss_pred cc-------------------------------------cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhC
Q 046083 641 AS-------------------------------------VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA 683 (790)
Q Consensus 641 ~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG 683 (790)
.. ......||+.|+|||++....++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 00 00124689999999999999999999999999999999999
Q ss_pred CccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHH
Q 046083 684 MEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS---MRAIVV 760 (790)
Q Consensus 684 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt---~~evl~ 760 (790)
..||..... ......+..... .+...........+.+++.+|+. +|.+|++ ++|+++
T Consensus 236 ~~Pf~~~~~--------~~~~~~i~~~~~-----------~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDNP--------QETYRKIINWKE-----------TLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCH--------HHHHHHHHcCCC-----------ccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999965322 111122221100 00000011234567889999997 9999998 998877
Q ss_pred HH
Q 046083 761 AL 762 (790)
Q Consensus 761 ~L 762 (790)
+-
T Consensus 296 h~ 297 (364)
T cd05599 296 HP 297 (364)
T ss_pred CC
Confidence 53
No 130
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=323.70 Aligned_cols=245 Identities=23% Similarity=0.374 Sum_probs=190.5
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
+|+..++||+|+||.||+|... ++.+|||.+.. ...+.+.+|+++++.++|+||+++++++.+ +..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 3556789999999999999886 78999999853 234568899999999999999999998874 5689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+.. ...+..+..++.|++.||+|||++++ +||||||+|||+++++.+||+|||+++....... .
T Consensus 155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-~ 224 (353)
T PLN00034 155 DGGSLEGTH------IADEQFLADVARQILSGIAYLHRRHI---VHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-P 224 (353)
T ss_pred CCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCCE---eecCCCHHHEEEcCCCCEEEcccccceecccccc-c
Confidence 999986532 35677788999999999999999998 9999999999999999999999999986543211 1
Q ss_pred ccccccCCCccchhcccC-----CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 644 HTRLVGTFGYMPPEYAQY-----GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
.....|+..|+|||++.. ...+.++|||||||++|||++|+.||...... +...........
T Consensus 225 ~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~-----~~~~~~~~~~~~-------- 291 (353)
T PLN00034 225 CNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG-----DWASLMCAICMS-------- 291 (353)
T ss_pred ccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc-----cHHHHHHHHhcc--------
Confidence 233578999999998743 23456899999999999999999999632211 111111111100
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.....+.....++.+++.+||+.||++|||+.|++++-+-
T Consensus 292 ------~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~ 331 (353)
T PLN00034 292 ------QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFI 331 (353)
T ss_pred ------CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 0111223345678999999999999999999999986543
No 131
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=6.6e-35 Score=310.08 Aligned_cols=249 Identities=29% Similarity=0.522 Sum_probs=197.8
Q ss_pred cCcccceeeeecCceEEEEEEEC-------CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFL 558 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~l 558 (790)
++|...++||+|+||.||++... +..+++|.+.. ...+.+.+|+++++.++|+||+++++++.++ ..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46788999999999999999642 45788888764 3346799999999999999999999988754 4899
Q ss_pred EEEEecCCChhhhhhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcE
Q 046083 559 VYEYIENGNLNQHLRGSGK-------------DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA 625 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~-------------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~ 625 (790)
+|||+++++|.+++..... ..+++..++.++.|++.||+|||++++ +|+||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i---~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHF---VHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCe---ecccccHhhEEEcCCCCE
Confidence 9999999999999975431 358999999999999999999999998 999999999999999999
Q ss_pred EEEEeCCCcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHH
Q 046083 626 KVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVAL 703 (790)
Q Consensus 626 kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~ 703 (790)
||+|||++......... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||...... ..
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--------~~ 233 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--------EA 233 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--------HH
Confidence 99999999765332211 1122345678999999999999999999999999999998 88887543221 11
Q ss_pred HHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 704 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
....... .....+...+..+.+++.+||+.||.+||+++||.+.|+
T Consensus 234 ~~~~~~~--------------~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 234 IECITQG--------------RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHcC--------------ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 1111110 001112234467889999999999999999999999886
No 132
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.8e-35 Score=324.32 Aligned_cols=257 Identities=23% Similarity=0.318 Sum_probs=201.8
Q ss_pred HHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec
Q 046083 482 YEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE 553 (790)
Q Consensus 482 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 553 (790)
+.++....++|++.+.||+|+||.||++... ++.+|+|.+... ..+.+.+|+.+++.++||||+++++.+.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4455556789999999999999999999986 778999998632 23457789999999999999999998875
Q ss_pred C-eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCC
Q 046083 554 G-SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGL 632 (790)
Q Consensus 554 ~-~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGl 632 (790)
+ ..++||||+++|+|.+++... .++...+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGF---IHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCE---EeCCCCHHHEEECCCCCEEEEeCCc
Confidence 4 589999999999999999753 47888899999999999999999998 9999999999999999999999999
Q ss_pred CcccccCCcccccccccCCCccchhcccCC----CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHH
Q 046083 633 AKLTEVGSASVHTRLVGTFGYMPPEYAQYG----EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVL 708 (790)
Q Consensus 633 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
++..............||+.|+|||++... .++.++|||||||++|||++|+.||..... ...+..+.
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~ 260 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL--------VGTYSKIM 260 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH--------HHHHHHHH
Confidence 986643332233346799999999998754 378999999999999999999999965321 12223332
Q ss_pred cCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHHHH
Q 046083 709 RQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQL--RPSMRAIVVALM 763 (790)
Q Consensus 709 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~L~ 763 (790)
..... +...........+.+++..|+..++.+ ||+++|++++..
T Consensus 261 ~~~~~-----------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 261 NHKNS-----------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred cCCCc-----------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 21110 000111234567889999999844443 789999988764
No 133
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.1e-34 Score=302.54 Aligned_cols=242 Identities=27% Similarity=0.487 Sum_probs=193.3
Q ss_pred eeeeecCceEEEEEEEC-CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecCCChh
Q 046083 496 NKIGQGGFGAVFYAELR-GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLN 569 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~g~L~ 569 (790)
+.||+|+||.||+|... +..+|+|.++.. ....+.+|++++++++||||+++++++... ..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999875 678999987642 234688999999999999999999998754 589999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccccccc
Q 046083 570 QHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVG 649 (790)
Q Consensus 570 ~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~g 649 (790)
+++.... ..+++..++.++.+++.+|.|||++++ +|+||+|+||+++.++.+||+|||++...............+
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~---~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESKNC---IHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI 156 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCe---eecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence 9987643 358999999999999999999999998 999999999999999999999999987543322211122334
Q ss_pred CCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCC
Q 046083 650 TFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDD 728 (790)
Q Consensus 650 t~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~ 728 (790)
+..|+|||++....++.++||||||+++|||++ |..||...... ........ .....
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--------~~~~~~~~--------------~~~~~ 214 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--------QAREQVEK--------------GYRMS 214 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--------HHHHHHHc--------------CCCCC
Confidence 668999999998899999999999999999998 88888543211 11111111 11112
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 729 YPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 729 ~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.+...+..+.+++.+|++.+|++||++.|+++.|.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 215 CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 23344567999999999999999999999998874
No 134
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=9.6e-35 Score=306.46 Aligned_cols=251 Identities=27% Similarity=0.468 Sum_probs=200.3
Q ss_pred hcCcccceeeeecCceEEEEEEEC--Cc---eEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GE---KAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFL 558 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~---~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~l 558 (790)
.++|+..+.||+|+||.||+|... +. .+++|.++.. ..+++..|++++++++|+|++++++++.+ +..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 357888999999999999999875 32 6899988642 34568899999999999999999998875 45899
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
||||+++++|.+++.... ..+++..+..++.+++.||+|||+.++ +|+||||+||++++++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i---~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNY---VHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCe---eccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999997643 358999999999999999999999997 9999999999999999999999999986543
Q ss_pred CCccccc--ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 639 GSASVHT--RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 639 ~~~~~~~--~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
....... ....+..|+|||++....++.++||||||+++|||++ |+.||..... ......+..
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--------~~~~~~i~~------ 225 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--------HEVMKAIND------ 225 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--------HHHHHHHhc------
Confidence 2221111 1223457999999998899999999999999999997 9999854321 111111111
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
......+.+.+..+.+++.+||+.+|++||++.+|++.|.++
T Consensus 226 --------~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 --------GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred --------CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011112233456789999999999999999999999999875
No 135
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4.5e-35 Score=309.53 Aligned_cols=250 Identities=27% Similarity=0.448 Sum_probs=198.2
Q ss_pred HHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--hhHHHHHHHHHHHHhc-CCCCCcceEEEEec-------C
Q 046083 487 KATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFLAELKVLTHV-HHLNLVRLIGYCVE-------G 554 (790)
Q Consensus 487 ~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-------~ 554 (790)
.+++.|++.+.||+|+||.||+|... ++.+|+|.+.. ....++..|+.++.++ +|+|++++++++.. .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 35667888999999999999999875 77899999864 3345688999999998 79999999998763 2
Q ss_pred eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
..+++|||+.+++|.+++.......+++..+..++.|++.||+|||++++ +|+||||+||++++++.++|+|||++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i---vh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKV---IHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCC---ccCCCCHHHEEECCCCCEEEccCCCce
Confidence 47899999999999999987555578999999999999999999999998 999999999999999999999999998
Q ss_pred ccccCCcccccccccCCCccchhccc-----CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHc
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
....... ......|+..|+|||++. ...++.++|||||||++|||++|..||...... ... .....
T Consensus 160 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-------~~~-~~~~~ 230 (272)
T cd06637 160 QLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-------RAL-FLIPR 230 (272)
T ss_pred ecccccc-cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-------HHH-HHHhc
Confidence 6543221 223456889999999986 345788999999999999999999998543211 000 01111
Q ss_pred CCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 710 QPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 710 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.. .+.+ .+...+..+.+++.+||+.+|.+|||+.|++.+
T Consensus 231 ~~----------~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 231 NP----------APRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CC----------CCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 00 0011 111234578899999999999999999999763
No 136
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.6e-35 Score=325.31 Aligned_cols=248 Identities=24% Similarity=0.289 Sum_probs=193.1
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYE 561 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e 561 (790)
.|+..+.||+|+||.||+|... ++.+|+|++... ..+.+.+|++++++++|+||+++++++.+. ..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888999999999999999885 779999998642 234688999999999999999999988754 5899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+++|+|.+++.... .+++..+..++.|++.||+|||+.++ +||||||+|||++.++++||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~gi---vHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMGF---IHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---eecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 999999999997643 58899999999999999999999998 9999999999999999999999999753311000
Q ss_pred ----------------------------------------------ccccccccCCCccchhcccCCCCCchhhHHHHHH
Q 046083 642 ----------------------------------------------SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGV 675 (790)
Q Consensus 642 ----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gv 675 (790)
.......||+.|+|||.+.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 0012346999999999999889999999999999
Q ss_pred HHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHH--ccccCCCCCC
Q 046083 676 VLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARA--CTQENPQLRP 753 (790)
Q Consensus 676 vl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~--Cl~~dP~~RP 753 (790)
++|||++|..||...... .......... ..+..........++.+++.+ |+..+|..||
T Consensus 237 il~elltG~~Pf~~~~~~--------~~~~~i~~~~-----------~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~ 297 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPT--------ETQLKVINWE-----------NTLHIPPQVKLSPEAVDLITKLCCSAEERLGRN 297 (381)
T ss_pred HHHHHHhCCCCCcCCCHH--------HHHHHHHccc-----------cccCCCCCCCCCHHHHHHHHHHccCcccccCCC
Confidence 999999999999653321 1111111100 000000011234567778877 5566777799
Q ss_pred CHHHHHHHH
Q 046083 754 SMRAIVVAL 762 (790)
Q Consensus 754 t~~evl~~L 762 (790)
+++|++.+-
T Consensus 298 ~~~~~l~hp 306 (381)
T cd05626 298 GADDIKAHP 306 (381)
T ss_pred CHHHHhcCc
Confidence 999998764
No 137
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-36 Score=307.53 Aligned_cols=257 Identities=28% Similarity=0.399 Sum_probs=197.9
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEe---cC-e--EEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCV---EG-S--LFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~---~~-~--~~lv~e~~ 563 (790)
|...+++|.|+||.||+|... ++.+|||+.-.+.. .-.+|+++|+.+.|||||+|.-++. +. + ..+|||||
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym 104 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM 104 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc
Confidence 556789999999999999986 78999999854322 2346899999999999999988765 22 2 46899999
Q ss_pred cCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC-CcEEEEEeCCCcccccCC
Q 046083 564 ENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN-FRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 564 ~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~-~~~kl~DfGla~~~~~~~ 640 (790)
+. +|.++++.. .+..++...+.-+..|+.+||.|||+.++ +||||||+|+|+|.+ |.+||||||.|+.+..+.
T Consensus 105 P~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~I---cHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e 180 (364)
T KOG0658|consen 105 PE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGI---CHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE 180 (364)
T ss_pred hH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCc---ccCCCChheEEEcCCCCeEEeccCCcceeeccCC
Confidence 88 999998852 23457777788899999999999999998 999999999999987 899999999999876554
Q ss_pred cccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
.. .....|..|+|||.+.+. .|+.+.||||.||++.||+-|++-|...+. .+.....-.++..+. .+++..
T Consensus 181 pn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-----~dQL~eIik~lG~Pt-~e~I~~ 252 (364)
T KOG0658|consen 181 PN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-----VDQLVEIIKVLGTPT-REDIKS 252 (364)
T ss_pred Cc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-----HHHHHHHHHHhCCCC-HHHHhh
Confidence 43 446678999999999864 799999999999999999999998866332 222222333333322 233332
Q ss_pred hcCC-------cC-----CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 720 LVDP-------RL-----GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 720 ~~d~-------~l-----~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+... .+ ..-+......+..+++.++++.+|.+|.++.|++.+
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 2211 11 111234556788999999999999999999998763
No 138
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1e-34 Score=305.94 Aligned_cols=254 Identities=25% Similarity=0.431 Sum_probs=202.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|++.+.||+|+||.||++... +..++||.+.. ....++.+|+++++.++|+||+++++++.+ +..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 46888899999999999999864 88999997753 233578899999999999999999998764 5689999
Q ss_pred EEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 561 EYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 561 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
||+++++|.+++... ....+++..++.++.+++.||.|||++++ +|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRV---MHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998742 23468999999999999999999999998 9999999999999999999999999876543
Q ss_pred CCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
... ......++..|+|||++.+..++.++|+||||+++|||++|..||...... .........
T Consensus 159 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~---------- 221 (267)
T cd08229 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIE---------- 221 (267)
T ss_pred CCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch------HHHHhhhhh----------
Confidence 221 122346788999999999888999999999999999999999998543211 111111111
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
....+.+ .+......+.+++.+||+.+|.+||||.+|++.+.++.
T Consensus 222 ~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 222 QCDYPPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred cCCCCCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1111111 11234567899999999999999999999999998753
No 139
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6e-35 Score=309.46 Aligned_cols=250 Identities=27% Similarity=0.452 Sum_probs=199.6
Q ss_pred hcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SL 556 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~ 556 (790)
.++|++.+.||+|+||.||+|... +..+++|.+... ....+.+|+.++..++|+|++++++++.++ ..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357889999999999999999875 257999998632 235688999999999999999999998754 58
Q ss_pred EEEEEEecCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEE
Q 046083 557 FLVYEYIENGNLNQHLRGSG--------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVA 628 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~ 628 (790)
++||||+++++|.+++.... ...++|..++.++.|++.||.|||+.++ +|+||||+|||++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKF---VHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCc---cccccChheEEEcCCCCEEEC
Confidence 99999999999999997532 1247899999999999999999999998 999999999999999999999
Q ss_pred EeCCCcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHH
Q 046083 629 DFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEE 706 (790)
Q Consensus 629 DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 706 (790)
|||+++........ ......++..|+|||.+....++.++||||||+++|||++ |..||..... ......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--------~~~~~~ 233 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--------EEVLKF 233 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--------HHHHHH
Confidence 99999865432211 1223456788999999998899999999999999999998 8888753221 111111
Q ss_pred HHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 707 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
... . .....+...+..+.+++.+||+.+|++|||+.++++.|+
T Consensus 234 ~~~-------------~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 234 VID-------------G-GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred Hhc-------------C-CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 111 0 011223334567899999999999999999999999875
No 140
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.4e-35 Score=318.08 Aligned_cols=237 Identities=26% Similarity=0.433 Sum_probs=191.3
Q ss_pred eeeeecCceEEEEEEE-----CCceEEEEEeChh-------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 496 NKIGQGGFGAVFYAEL-----RGEKAAIKKMDMQ-------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~-----~g~~vavK~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+.||+|+||.||+++. .++.+|+|.++.. ....+.+|+++++.++||||+++++++.. +..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6899999999999975 2678999998642 22356789999999999999999988764 568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++...+ .+.+..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... .
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~ 155 (323)
T cd05584 82 LSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQGI---IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-T 155 (323)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-C
Confidence 99999999997654 47888889999999999999999998 999999999999999999999999987532222 1
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~--------~~~~~~~~~~------------ 215 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR--------KKTIDKILKG------------ 215 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH--------HHHHHHHHcC------------
Confidence 22335689999999999988899999999999999999999999864321 1111222211
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
. ...+......+.+++.+||+.+|++|| ++++++++
T Consensus 216 -~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 216 -K--LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred -C--CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 1 112233446788999999999999999 78888764
No 141
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.4e-34 Score=338.92 Aligned_cols=264 Identities=25% Similarity=0.416 Sum_probs=207.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++|++.++||+|+||.||+|... ++.+|+|++... ..+++.+|++++++++||||+++++++.++ ..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999875 789999998632 235689999999999999999999998754 589999
Q ss_pred EEecCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeC
Q 046083 561 EYIENGNLNQHLRGSG---------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFG 631 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfG 631 (790)
||+++|+|.+++.... ...+++..+++++.++++||+|||++++ +||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GI---IHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGV---LHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCc---cccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886421 1346778889999999999999999998 999999999999999999999999
Q ss_pred CCcccccCCc-----------------ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCcccccccccc
Q 046083 632 LAKLTEVGSA-----------------SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694 (790)
Q Consensus 632 la~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~ 694 (790)
+++....... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~- 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR- 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh-
Confidence 9986521110 0112356899999999999999999999999999999999999998642211
Q ss_pred ccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC-CHHHHHHHHHhhccCCccCC
Q 046083 695 TESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRP-SMRAIVVALMTLSSSSEDWD 773 (790)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-t~~evl~~L~~l~~~~~~~~ 773 (790)
.. ...... .++... .-..+.+..+.+++.+|++.||++|| +++++.+.|........+|.
T Consensus 238 ----ki--~~~~~i------------~~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~w~ 298 (932)
T PRK13184 238 ----KI--SYRDVI------------LSPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPEWT 298 (932)
T ss_pred ----hh--hhhhhc------------cChhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcccc
Confidence 00 000000 000000 00113445688999999999999995 68888899998877777776
Q ss_pred cCC
Q 046083 774 IGS 776 (790)
Q Consensus 774 ~~~ 776 (790)
+..
T Consensus 299 ~~~ 301 (932)
T PRK13184 299 VKA 301 (932)
T ss_pred ccc
Confidence 543
No 142
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.7e-35 Score=301.49 Aligned_cols=261 Identities=26% Similarity=0.394 Sum_probs=199.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhH-----HHHHHHHHHHHhcCCCC-CcceEEEEec-C------
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS-----KEFLAELKVLTHVHHLN-LVRLIGYCVE-G------ 554 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~n-iv~l~g~~~~-~------ 554 (790)
..|...++||+|.||+||+|+.. |+.||+|+++.+.. ....+|+.+|++++|+| |+.+++++.. .
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 44666788999999999999886 88999999875433 34689999999999999 9999998863 2
Q ss_pred eEEEEEEEecCCChhhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCC
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGK--DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGL 632 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGl 632 (790)
.+++||||++. +|..++..... ..++...+..++.|+++||+|||++++ +||||||+|||++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~I---lHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGI---LHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecccCCcceEEECCCCcEeeeccch
Confidence 57899999977 99999987653 357778899999999999999999998 9999999999999999999999999
Q ss_pred CcccccCCcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCC
Q 046083 633 AKLTEVGSASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711 (790)
Q Consensus 633 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (790)
|+...... ...+..++|..|+|||++.+. .|+...||||+||++.||+++++.|....+. ..+. .....+..+
T Consensus 167 Ara~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~----~ql~-~If~~lGtP 240 (323)
T KOG0594|consen 167 ARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI----DQLF-RIFRLLGTP 240 (323)
T ss_pred HHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH----HHHH-HHHHHcCCC
Confidence 99654222 224456789999999999877 7999999999999999999998888665431 1111 122222222
Q ss_pred CChhhhhhhc---CCc--CCCCC-CH-------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 712 DPREDLQRLV---DPR--LGDDY-PI-------DSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 712 ~~~~~l~~~~---d~~--l~~~~-~~-------~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.. +.+.... +-. ..... +. .......+++.+|++.+|.+|.|++.++++
T Consensus 241 ~e-~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 241 NE-KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred Cc-cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11 1111111 111 00000 11 111367899999999999999999999986
No 143
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.1e-34 Score=305.96 Aligned_cols=250 Identities=26% Similarity=0.457 Sum_probs=199.8
Q ss_pred cCcccceeeeecCceEEEEEEEC-----CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-----GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-----g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv 559 (790)
.+|++.+.||+|+||.||+|... +..+|+|.++. ...+.+.+|+.++.+++||||+++++++.+ +..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888999999999999999864 23689998864 234578999999999999999999998874 458999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+++++|.+++.... ..+++.++++++.+++.||+|||+.++ +||||||+|||++.++.++|+|||++......
T Consensus 84 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i---~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMGY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCE---eehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 99999999999998654 358999999999999999999999997 99999999999999999999999999866433
Q ss_pred Ccccc--cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 640 SASVH--TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 640 ~~~~~--~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
..... ....++..|+|||++.+..++.++|+||||+++||+++ |..||...... .....+...
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--------~~~~~~~~~------ 225 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--------DVIKAIEEG------ 225 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--------HHHHHHhCC------
Confidence 22111 11223568999999998899999999999999999887 99998643221 111111111
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.....+...+..+.+++.+|++.+|.+||+|.++++.|..+
T Consensus 226 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 --------YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred --------CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00111223456788999999999999999999999998864
No 144
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8e-35 Score=309.48 Aligned_cols=241 Identities=27% Similarity=0.411 Sum_probs=191.4
Q ss_pred eeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCCh
Q 046083 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNL 568 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L 568 (790)
||+|+||+||++... ++.+|+|.+.... .+.+..|+++++.++|+||+++.+++.. ...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999875 7899999986432 2456789999999999999999988764 568999999999999
Q ss_pred hhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccc
Q 046083 569 NQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR 646 (790)
Q Consensus 569 ~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 646 (790)
..++... ....+++..+..++.|++.||.|||++++ +||||||+||+++.++.+||+|||++........ ....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~ 156 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRI---IYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTKG 156 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-cccc
Confidence 9887542 23468999999999999999999999998 9999999999999999999999999976543222 2233
Q ss_pred cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCC
Q 046083 647 LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLG 726 (790)
Q Consensus 647 ~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~ 726 (790)
..|++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....... ......
T Consensus 157 ~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~----~~~~~~~-------------~~~~~~-- 217 (280)
T cd05608 157 YAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQ-------------RILNDS-- 217 (280)
T ss_pred cCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch----hHHHHHH-------------hhcccC--
Confidence 578999999999999999999999999999999999999996533210 0000011 111111
Q ss_pred CCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 727 DDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 727 ~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
..++...+..+.+++.+||+.||++|| ++++++.+
T Consensus 218 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 218 VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 122334556789999999999999999 67777764
No 145
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=6.2e-35 Score=317.09 Aligned_cols=240 Identities=26% Similarity=0.419 Sum_probs=191.3
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHH---HhcCCCCCcceEEEEec-CeEEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVL---THVHHLNLVRLIGYCVE-GSLFLV 559 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l---~~l~h~niv~l~g~~~~-~~~~lv 559 (790)
|++.+.||+|+||.||+|... ++.+|||.++.. ..+.+.+|++++ +.++||||+++++++.+ +..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 677899999999999999886 789999998643 234466666655 56689999999998875 458999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+++++|..+++. ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~i---vHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKI---VYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCe---EecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999988864 358999999999999999999999998 99999999999999999999999998753221
Q ss_pred CcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
. .......|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+...
T Consensus 155 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~--------~~~~~~i~~~--------- 216 (324)
T cd05589 155 G-DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE--------EEVFDSIVND--------- 216 (324)
T ss_pred C-CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC---------
Confidence 1 222346789999999999999999999999999999999999999864321 1111121111
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
. ...+...+..+.+++.+||+.||.+|| ++.+++++
T Consensus 217 ----~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 217 ----E--VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred ----C--CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 0 112233456788999999999999999 56666654
No 146
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.6e-35 Score=309.16 Aligned_cols=244 Identities=25% Similarity=0.372 Sum_probs=192.2
Q ss_pred eeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCCh
Q 046083 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNL 568 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L 568 (790)
||+|+||.||++... |+.+|+|.+.... ...+..|++++++++||||+++++++.+ ...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999875 8899999986422 2345679999999999999999988764 458999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 648 (790)
.+++.......+++..+..++.|++.||+|||+.++ +||||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDI---VYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRA 155 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCE---EEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccC
Confidence 998876655669999999999999999999999997 999999999999999999999999987654322 223356
Q ss_pred cCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCC
Q 046083 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDD 728 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~ 728 (790)
|+..|+|||++.+..++.++|||||||++|||++|+.||....... ......... ........
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~----~~~~~~~~~-------------~~~~~~~~ 218 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV----AKEELKRRT-------------LEDEVKFE 218 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh----hHHHHHHHh-------------hccccccc
Confidence 8999999999998889999999999999999999999986432210 001111111 11111000
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 729 YPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 729 ~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
......++.+++..||+.||++||+++|+++.+..
T Consensus 219 -~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~ 253 (277)
T cd05607 219 -HQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRK 253 (277)
T ss_pred -cccCCHHHHHHHHHHhccCHhhCCCCccchhhhhc
Confidence 11234568999999999999999999877654443
No 147
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.6e-36 Score=319.16 Aligned_cols=248 Identities=27% Similarity=0.449 Sum_probs=209.6
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-Ce-EEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GS-LFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~-~~lv~ 560 (790)
++|...+.+|+|+||.++..+.+ +..+++|.+... ..+...+|+.++++++|||||.+.+.+.+ +. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56888999999999999988765 678999998642 23457889999999999999999997764 45 79999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
+|++||+|.+.+.......+++..+.+++.|++.|+.|||++.+ +|||||+.|||++.+..+||+|||+|+.+....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~i---LHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRV---LHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhh---hcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 99999999999988766789999999999999999999999988 999999999999999999999999999886543
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.......||+.||.||.+.+.+|..|+|||||||++|||++=+++|...+ ...+...+...
T Consensus 161 -~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~--------m~~Li~ki~~~---------- 221 (426)
T KOG0589|consen 161 -SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN--------MSELILKINRG---------- 221 (426)
T ss_pred -hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc--------hHHHHHHHhhc----------
Confidence 23456889999999999999999999999999999999999999886543 22233333221
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.....|.....++..++..|++.+|+.||++.+++....
T Consensus 222 ----~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~ 260 (426)
T KOG0589|consen 222 ----LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPH 260 (426)
T ss_pred ----cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChh
Confidence 123345567788999999999999999999999987533
No 148
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3e-34 Score=302.16 Aligned_cols=253 Identities=25% Similarity=0.440 Sum_probs=204.3
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|++.+.||+|+||.||+|... ++.+++|.++. ...+.+.+|++++++++|+|++++++++.+ +..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999986 88999998752 234678899999999999999999998875 4589999
Q ss_pred EEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 561 EYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 561 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
||+++++|.+++... ....+++.++++++.+++.||.|||+.++ +|+||+|+||+++.++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRI---MHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCE---ecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998642 23458999999999999999999999998 9999999999999999999999999876543
Q ss_pred CCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
... ......++..|+|||.+.+..++.++|+||||+++|||++|+.||..... ...........
T Consensus 159 ~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~--------- 222 (267)
T cd08224 159 KTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM------NLYSLCKKIEK--------- 222 (267)
T ss_pred CCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc------cHHHHHhhhhc---------
Confidence 221 12234578899999999988999999999999999999999999854321 11111111111
Q ss_pred hhcCCcCCCCCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 719 RLVDPRLGDDYPI-DSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 719 ~~~d~~l~~~~~~-~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
......+. .....+.+++.+||+.+|++|||+.+|++.|..+.
T Consensus 223 -----~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 223 -----CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -----CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 00111122 44567889999999999999999999999998764
No 149
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.2e-34 Score=309.34 Aligned_cols=254 Identities=26% Similarity=0.447 Sum_probs=199.5
Q ss_pred HhcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-e
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-S 555 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~ 555 (790)
..++|++.+.||+|+||.||+|..+ +..+|+|.++.. ....+.+|+.+++.++|+||+++++++.++ .
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999653 347999987632 234578899999999999999999987754 5
Q ss_pred EEEEEEEecCCChhhhhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEE
Q 046083 556 LFLVYEYIENGNLNQHLRGSG--------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKV 627 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~--------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl 627 (790)
.++||||+++|+|.+++.... ...+++..+.+++.+++.||.|||++++ +||||||+|||+++++.++|
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC---cCCCCChheEEEcCCCcEEE
Confidence 899999999999999997532 2346788899999999999999999998 99999999999999999999
Q ss_pred EEeCCCcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHH
Q 046083 628 ADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFE 705 (790)
Q Consensus 628 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~ 705 (790)
+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .....
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--------~~~~~ 232 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--------EQVLK 232 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHH
Confidence 999999855332211 1122345678999999998899999999999999999998 6777754221 11111
Q ss_pred HHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 706 EVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 706 ~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
..... .. ...+...+..+.+++.+||+.+|++|||+.++++.|....
T Consensus 233 ~~~~~-------------~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 233 FVMDG-------------GY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHcC-------------CC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 11111 00 1112233467999999999999999999999999988753
No 150
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.7e-35 Score=316.49 Aligned_cols=246 Identities=22% Similarity=0.340 Sum_probs=191.3
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||++... ++.+|+|.++.. ..+.+..|+.++.++ +||||+++++++.. ...++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999886 678999998643 234577888888877 89999999998764 568999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|..++.... .+++..+..++.+++.||+|||++++ +||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~i---vH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGI---IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTS 154 (329)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCCHHHEEECCCCCEEEeeCCccccccCCC-Cccc
Confidence 99999887643 58999999999999999999999998 999999999999999999999999987532211 1223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|+.||....................+ ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i------------~~~~- 221 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI------------LEKQ- 221 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH------------hcCC-
Confidence 457899999999999999999999999999999999999999643221111111111111111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPS------MRAIVVA 761 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt------~~evl~~ 761 (790)
..+|......+.+++.+||+.||++||+ +.+++++
T Consensus 222 -~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 222 -IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred -CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 1233344567889999999999999998 5676654
No 151
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=1.5e-34 Score=302.69 Aligned_cols=248 Identities=27% Similarity=0.483 Sum_probs=198.5
Q ss_pred cCcccceeeeecCceEEEEEEEC-CceEEEEEeChh--hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ--ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~--~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
.+|++.+.||+|+||.||++.+. +..+++|.+... ...++.+|++++++++|||++++++++.. ...+++|||+++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 83 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEH 83 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCC
Confidence 46788899999999999999886 788999988743 24678999999999999999999998874 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|.+++.... ..+++..++.++.+++.||+|||+.++ +|+||||+||+++.++.+||+|||+++...........
T Consensus 84 ~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i---~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~ 159 (256)
T cd05112 84 GCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSNV---IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST 159 (256)
T ss_pred CcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCc---cccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence 99999997643 358899999999999999999999998 99999999999999999999999998755322211122
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...++.+|+|||.+.+..++.++||||||+++|||++ |..||..... ..........
T Consensus 160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~-------------- 217 (256)
T cd05112 160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--------SEVVETINAG-------------- 217 (256)
T ss_pred CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--------HHHHHHHhCC--------------
Confidence 2335678999999998899999999999999999998 8888854321 1111111110
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.....+...+..+.+++.+||+.+|++|||+.|+++.|.
T Consensus 218 ~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 218 FRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred CCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 000111123467899999999999999999999998763
No 152
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=9.7e-35 Score=316.18 Aligned_cols=246 Identities=22% Similarity=0.348 Sum_probs=192.3
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||++... +..+|+|.++.. ..+.+..|..++..+ +||||+++++++.+ ...|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999886 788999998743 234577899999988 79999999998875 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++...+ .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGI---IYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTTS 154 (329)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHeEECCCCCEEECcCccccccccC-CCccc
Confidence 99999887643 58999999999999999999999998 99999999999999999999999998743211 11223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|+|||||++|||++|+.||.................... +.....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 222 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQV------------ILEKQI 222 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHH------------HHcCCC
Confidence 45789999999999999999999999999999999999999964332111011111111111 111111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPS------MRAIVVA 761 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt------~~evl~~ 761 (790)
..|......+.+++.+||+.||.+||+ +++++++
T Consensus 223 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 223 --RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred --CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 123334567889999999999999997 6777654
No 153
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.6e-35 Score=315.98 Aligned_cols=242 Identities=28% Similarity=0.458 Sum_probs=192.8
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCC-CCcceEEEEec-CeEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHL-NLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~-niv~l~g~~~~-~~~~lv~ 560 (790)
+|++.+.||+|+||.||+|... ++.+|+|.+... ..+.+..|.+++..++|+ +|+++++++.+ +..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 5888999999999999999886 678999998642 335578899999999765 57778877764 5689999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++.... .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKGI---IYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 9999999999997654 48899999999999999999999998 999999999999999999999999987432211
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~---------- 216 (324)
T cd05587 156 -KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--------DELFQSIMEH---------- 216 (324)
T ss_pred -CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcC----------
Confidence 122345689999999999999999999999999999999999999864321 1112222211
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSM-----RAIVVA 761 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~-----~evl~~ 761 (790)
. ..++......+.+++.+||+.||.+||+. +++.++
T Consensus 217 ---~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 217 ---N--VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred ---C--CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0 12233345678899999999999999976 566543
No 154
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.5e-35 Score=324.35 Aligned_cols=249 Identities=24% Similarity=0.318 Sum_probs=194.2
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++|++.+.||+|+||.||++... ++.+|||.+... ..+.+.+|++++++++||||+++++++.+. ..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47889999999999999999875 789999988542 235678899999999999999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.++ +||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~gi---vHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLGF---IHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9999999999997643 58899999999999999999999998 999999999999999999999999996321100
Q ss_pred cc----------------------------------------------cccccccCCCccchhcccCCCCCchhhHHHHH
Q 046083 641 AS----------------------------------------------VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFG 674 (790)
Q Consensus 641 ~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~G 674 (790)
.. ......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 00124689999999999999999999999999
Q ss_pred HHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC--
Q 046083 675 VVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLR-- 752 (790)
Q Consensus 675 vvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R-- 752 (790)
|++|||++|..||..... ...+..+..... .+.-.........+.+++.+|++ +|.+|
T Consensus 236 vil~elltG~~Pf~~~~~--------~~~~~~i~~~~~-----------~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~ 295 (377)
T cd05629 236 AIMFECLIGWPPFCSENS--------HETYRKIINWRE-----------TLYFPDDIHLSVEAEDLIRRLIT-NAENRLG 295 (377)
T ss_pred hhhhhhhcCCCCCCCCCH--------HHHHHHHHccCC-----------ccCCCCCCCCCHHHHHHHHHHhc-CHhhcCC
Confidence 999999999999964322 111222221100 00000011234568899999997 66665
Q ss_pred -CCHHHHHHHHH
Q 046083 753 -PSMRAIVVALM 763 (790)
Q Consensus 753 -Pt~~evl~~L~ 763 (790)
+++.|++.+-+
T Consensus 296 r~~~~~~l~hp~ 307 (377)
T cd05629 296 RGGAHEIKSHPF 307 (377)
T ss_pred CCCHHHHhcCCC
Confidence 69999988654
No 155
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2e-34 Score=301.70 Aligned_cols=245 Identities=27% Similarity=0.419 Sum_probs=198.6
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
+|++.+.||+|+||.||++... +..+++|.++. ...+.+..|+.+++.++|+|++++++.+.+ +..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 5788999999999999999875 78899998753 234568889999999999999999998764 5689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++.......+++...+.++.+++.||.|||++++ +|+||||+||++++++.++|+|||++....... ..
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i---~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~ 156 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRV---LHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AY 156 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCc---ccCCCCcceEEECCCCcEEEcccCcceeecccc-cc
Confidence 99999999876544568999999999999999999999998 999999999999999999999999997654322 12
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
.....|++.|+|||++.+..++.++|+||||+++|+|++|..||..... ...........
T Consensus 157 ~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--------~~~~~~~~~~~------------ 216 (255)
T cd08219 157 ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--------KNLILKVCQGS------------ 216 (255)
T ss_pred cccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH--------HHHHHHHhcCC------------
Confidence 2335688899999999988999999999999999999999999854321 11111111110
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....+......+.+++.+||+.||++||++.|++..
T Consensus 217 --~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 217 --YKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 011122344568899999999999999999999864
No 156
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-35 Score=301.44 Aligned_cols=274 Identities=28% Similarity=0.427 Sum_probs=209.2
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeC-----hhhHHHHHHHHHHHHhcCCCCCcceEEEEec------Ce
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGYCVE------GS 555 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~ 555 (790)
...|...+.||+|.||.|+.+..+ |+.||||++. .-..++..+|+++|++++|+||+.+++.+.. .+
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~D 100 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFND 100 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccce
Confidence 345666789999999999999886 8999999986 2345678899999999999999999998753 24
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
.|+|+|+|+. +|...++.. +.++...+..++.|+++||.|+|+.++ +||||||+|+|++.+..+||+|||+|+.
T Consensus 101 vYiV~elMet-DL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAnV---iHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 101 VYLVFELMET-DLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSANV---IHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred eEEehhHHhh-HHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcccc---cccccchhheeeccCCCEEeccccceee
Confidence 8999999955 999999864 348899999999999999999999998 9999999999999999999999999998
Q ss_pred cccC-CcccccccccCCCccchhccc-CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC
Q 046083 636 TEVG-SASVHTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 636 ~~~~-~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
.... .....+..+.|.+|+|||.+. ...|+...||||.||||.||++|++.|...+. .+........+..+.
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~-----v~Ql~lI~~~lGtP~- 248 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY-----VHQLQLILELLGTPS- 248 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch-----HHHHHHHHHhcCCCC-
Confidence 7543 122345677899999999875 56899999999999999999999998866432 122233333333332
Q ss_pred hhhhhhhc--------C--CcC-CCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCCc
Q 046083 714 REDLQRLV--------D--PRL-GDDY---PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDI 774 (790)
Q Consensus 714 ~~~l~~~~--------d--~~l-~~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~ 774 (790)
.+.+..+- . +.. +..+ -........+|+.+||..||.+|+|++|.+++---..-...+.|+
T Consensus 249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 22222211 1 000 0010 013445678999999999999999999999865544333344344
No 157
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-34 Score=313.02 Aligned_cols=256 Identities=25% Similarity=0.459 Sum_probs=200.8
Q ss_pred hcCcccceeeeecCceEEEEEEEC---------CceEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEecC
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR---------GEKAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVEG 554 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~---------g~~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 554 (790)
.++|.+.+.||+|+||.||++... ...+|+|.++. ....++.+|+++++++ +||||+++++++.+.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 356888999999999999999752 34689998763 2345688999999999 699999999988754
Q ss_pred -eEEEEEEEecCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEe
Q 046083 555 -SLFLVYEYIENGNLNQHLRGSG--------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILI 619 (790)
Q Consensus 555 -~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl 619 (790)
..+++|||+++|+|.+++.... ...+++.++.+++.|++.||.|||++++ +||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi---~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRC---IHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCe---eeccccceeEEE
Confidence 5899999999999999996532 1358999999999999999999999998 999999999999
Q ss_pred cCCCcEEEEEeCCCcccccCCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccc
Q 046083 620 DKNFRAKVADFGLAKLTEVGSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITES 697 (790)
Q Consensus 620 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~ 697 (790)
++++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||.....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~----- 242 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV----- 242 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-----
Confidence 999999999999998654322111 112234567999999998899999999999999999999 8888743221
Q ss_pred cchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCC
Q 046083 698 TGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769 (790)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~ 769 (790)
...+...... .....+...+..+.+++.+||+.+|++|||+.|+++.|..+....
T Consensus 243 ---~~~~~~~~~~--------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 243 ---EELFKLLREG--------------HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred ---HHHHHHHHcC--------------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 1111111110 011223344567889999999999999999999999999876543
No 158
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.9e-34 Score=304.46 Aligned_cols=250 Identities=26% Similarity=0.478 Sum_probs=198.1
Q ss_pred cCcccceeeeecCceEEEEEEEC--C---ceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--G---EKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g---~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv 559 (790)
.+|++.+.||+|+||.||+|... + ..+++|.++. ...++|..|+.++++++||||+++++++.++ ..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 35778999999999999999875 3 2599999864 2346799999999999999999999988754 58999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+++++|.+++.... ..+++..++.++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++......
T Consensus 84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g~---~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999997643 358999999999999999999999997 99999999999999999999999998765432
Q ss_pred Cccc--ccccc--cCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 640 SASV--HTRLV--GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 640 ~~~~--~~~~~--gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
.... ..... .+..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--------~~~~~~i~~~---- 227 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--------QDVINAIEQD---- 227 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--------HHHHHHHHcC----
Confidence 2111 11111 2457999999999999999999999999999886 9998854321 1111111110
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.....+.+.+..+.+++.+||+.+|.+||++++|+..|..+
T Consensus 228 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 ----------YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ----------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 01111233456788999999999999999999999998764
No 159
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.3e-34 Score=307.62 Aligned_cols=248 Identities=21% Similarity=0.360 Sum_probs=195.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
++|++.+.||+|+||.||+|... +..+|+|.+.. ...+++.+|++++.+++|||++++++++.. ...++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 46788899999999999999874 78899998753 234568899999999999999999998774 568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|..+. .+++..+..++.+++.||.|||+.++ +|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--- 148 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKI---LHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--- 148 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCE---eeCCCCHHHEEECCCCCEEEeeCCcceecccc---
Confidence 9999997653 36788899999999999999999998 99999999999999999999999999765322
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
......|+..|+|||++.+..++.++|+||||+++|||++|+.||......... .............. .
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~----------~ 217 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS-LMPLQLLQCIVDED----------P 217 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc-cchHHHHHHHhccC----------C
Confidence 223356889999999999889999999999999999999999998653321100 00011111111110 0
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+.+ .......++.+++.+|++.+|++||+++|++++.+
T Consensus 218 ~~~---~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~ 255 (279)
T cd06619 218 PVL---PVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPF 255 (279)
T ss_pred CCC---CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcc
Confidence 111 01123456889999999999999999999988654
No 160
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=9.3e-35 Score=327.95 Aligned_cols=263 Identities=25% Similarity=0.381 Sum_probs=194.6
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEec-------C--eE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE-------G--SL 556 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-------~--~~ 556 (790)
..++|++.+.||+|+||.||+|... ++.+|||++.... ....+|+.+++.++||||+++++++.. . .+
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 142 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFL 142 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEE
Confidence 3467999999999999999999875 7899999885432 234579999999999999999887531 1 25
Q ss_pred EEEEEEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC-cEEEEEeCCC
Q 046083 557 FLVYEYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLA 633 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~-~~kl~DfGla 633 (790)
++||||+++ +|.+++... ....+++..+..++.|++.||+|||++++ +||||||+|||++.++ .+||+|||++
T Consensus 143 ~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~I---iHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 143 NVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFI---CHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred EEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCcCHHHEEEcCCCCceeeeccccc
Confidence 789999985 777776532 23468999999999999999999999998 9999999999999665 7999999999
Q ss_pred cccccCCcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
+...... ......|++.|+|||++.+. .++.++|||||||++|||++|.+||...... ..+.. ....+..+.
T Consensus 219 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~----~~~~~-i~~~~~~p~ 291 (440)
T PTZ00036 219 KNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV----DQLVR-IIQVLGTPT 291 (440)
T ss_pred hhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHH-HHHHhCCCC
Confidence 8654322 22335689999999998754 6899999999999999999999999653321 01111 111111111
Q ss_pred Chhhhhhh------------cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 713 PREDLQRL------------VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 713 ~~~~l~~~------------~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.+.+..+ ....+...++...+.++.+|+.+||+.||.+|||+.|++++-.
T Consensus 292 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 292 -EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred -HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 1111110 0001111123334567899999999999999999999987644
No 161
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.8e-34 Score=310.33 Aligned_cols=254 Identities=22% Similarity=0.401 Sum_probs=201.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--Cc----eEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GE----KAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~----~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv 559 (790)
++|+..+.||+|+||.||+|.+. +. .+|+|.+... ...++.+|+.++++++||||+++++++.....+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v 86 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV 86 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence 46778899999999999999874 43 4788887642 23468899999999999999999999987778899
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
+||+++|+|.+++.... ..+++..++.++.|++.||.|||++++ +|+||||+|||++.++.+||+|||+++.....
T Consensus 87 ~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i---vH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 87 TQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERRL---VHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred ehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcCe---eccccccceeeecCCCceEEccccccccccCc
Confidence 99999999999987643 358999999999999999999999998 99999999999999999999999999865432
Q ss_pred Cccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 640 SASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 640 ~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
.... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||...... . ...++...
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--------~-~~~~~~~~------ 227 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--------E-IPDLLEKG------ 227 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--------H-HHHHHHCC------
Confidence 2211 122345678999999998899999999999999999997 88888543210 0 11111111
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCC
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~ 769 (790)
.....+......+.+++..||..+|++||+++++++.|..+....
T Consensus 228 -------~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 228 -------ERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 001111223457889999999999999999999999999875543
No 162
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=4.4e-35 Score=318.40 Aligned_cols=238 Identities=25% Similarity=0.388 Sum_probs=191.7
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g 566 (790)
+.||+|+||.||++... +..+|+|.++.. ....+..|++++..++||||+++++++.+ +..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999875 789999998643 23457789999999999999999988764 5589999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
+|..++.... .+++..+..++.|++.||+|||+ .++ +||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~i---vHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~ 154 (325)
T cd05594 81 ELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNV---VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMK 154 (325)
T ss_pred cHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCE---EecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cccc
Confidence 9999887643 58999999999999999999997 676 999999999999999999999999987532211 1223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... .......... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--------~~~~~~i~~~-------------~- 212 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--------EKLFELILME-------------E- 212 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH--------HHHHHHHhcC-------------C-
Confidence 35689999999999999999999999999999999999999854321 1111111111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVAL 762 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~L 762 (790)
..++.....++.+++.+||+.||++|+ ++.+++++-
T Consensus 213 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~ 253 (325)
T cd05594 213 -IRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHK 253 (325)
T ss_pred -CCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCC
Confidence 112233445788999999999999996 899998753
No 163
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2e-34 Score=308.71 Aligned_cols=257 Identities=28% Similarity=0.475 Sum_probs=199.2
Q ss_pred hcCcccceeeeecCceEEEEEEECC------------------ceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcc
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELRG------------------EKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVR 546 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~g------------------~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~ 546 (790)
..+|++.+.||+|+||.||++...+ ..+|+|.+... ..+++.+|++++++++|||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578999999999999999987642 35899998643 3467889999999999999999
Q ss_pred eEEEEec-CeEEEEEEEecCCChhhhhhcCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCC
Q 046083 547 LIGYCVE-GSLFLVYEYIENGNLNQHLRGSG---------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPAN 616 (790)
Q Consensus 547 l~g~~~~-~~~~lv~e~~~~g~L~~~l~~~~---------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~N 616 (790)
+++++.. +..+++|||+++++|.+++.... ...+++..++.++.+++.||+|||++++ +|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i---~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNF---VHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCc---cccccchhc
Confidence 9998875 56899999999999999997643 1268999999999999999999999998 999999999
Q ss_pred EEecCCCcEEEEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh--CCccccccccc
Q 046083 617 ILIDKNFRAKVADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS--AMEAVVKTNET 693 (790)
Q Consensus 617 ILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt--G~~p~~~~~~~ 693 (790)
|+++.++.++|+|||+++....... .......++..|+|||.+....++.++||||||+++|||++ |..||.....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~- 239 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD- 239 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-
Confidence 9999999999999999876532221 11223456788999999998899999999999999999998 5566643221
Q ss_pred cccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 694 ITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
...+......... .........+...+.++.+++.+||+.+|.+|||+.||++.|.
T Consensus 240 -------~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 -------QQVIENAGHFFRD-------DGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred -------HHHHHHHHhcccc-------ccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1111111110000 0000111112234467999999999999999999999998885
No 164
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.7e-35 Score=324.16 Aligned_cols=248 Identities=24% Similarity=0.294 Sum_probs=193.7
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|++.+.||+|+||.||+++.. ++.+|+|.+... ..+.+.+|++++++++|+||+++++.+.+ +..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36899999999999999999876 789999998642 23557889999999999999999998875 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||++..+....
T Consensus 81 E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~i---vHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMGF---IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 9999999999997654 58888999999999999999999998 999999999999999999999999975321000
Q ss_pred ------------------------------------------cccccccccCCCccchhcccCCCCCchhhHHHHHHHHH
Q 046083 641 ------------------------------------------ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLY 678 (790)
Q Consensus 641 ------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ 678 (790)
........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 00011246899999999999999999999999999999
Q ss_pred HHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC---CH
Q 046083 679 ELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRP---SM 755 (790)
Q Consensus 679 elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP---t~ 755 (790)
||++|+.||...... .......... ..+...........+.+++.+|+ .+|.+|+ ++
T Consensus 236 ell~G~~Pf~~~~~~--------~~~~~i~~~~-----------~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~ 295 (376)
T cd05598 236 EMLVGQPPFLADTPA--------ETQLKVINWE-----------TTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGA 295 (376)
T ss_pred ehhhCCCCCCCCCHH--------HHHHHHhccC-----------ccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCH
Confidence 999999999654321 1111111110 00000111123455677888876 4999999 89
Q ss_pred HHHHHHH
Q 046083 756 RAIVVAL 762 (790)
Q Consensus 756 ~evl~~L 762 (790)
.|++++-
T Consensus 296 ~ell~h~ 302 (376)
T cd05598 296 DEIKAHP 302 (376)
T ss_pred HHHhCCC
Confidence 9998763
No 165
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3.5e-34 Score=304.22 Aligned_cols=255 Identities=24% Similarity=0.398 Sum_probs=204.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--Cc----eEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GE----KAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~----~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv 559 (790)
.+|++.+.||+|+||.||+|.+. ++ .+++|.+... ...++.+|+.++++++|+|++++++++.....+++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 86 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI 86 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence 46788899999999999999874 32 5899987643 34678899999999999999999999988889999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+++|+|.+++.... ..+++..+++++.|++.||+|||++++ +|+||||+||+++.++.+||+|||+++.....
T Consensus 87 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i---~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 87 TQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRL---VHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCE---EecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999999998643 358999999999999999999999987 99999999999999999999999999866433
Q ss_pred Ccccc-cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 640 SASVH-TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 640 ~~~~~-~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
..... ....++..|+|||.+....++.++|+||||+++|||++ |+.||..... ......+...
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--------~~~~~~~~~~------- 227 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--------VEIPDLLEKG------- 227 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhCC-------
Confidence 22111 11223568999999988899999999999999999998 9999854321 1111111110
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCc
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~ 770 (790)
.....+..+...+.+++.+||..+|.+||++.++++.|..+.....
T Consensus 228 -------~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 228 -------ERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred -------CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 0111122334568899999999999999999999999999866443
No 166
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=325.84 Aligned_cols=251 Identities=24% Similarity=0.383 Sum_probs=212.9
Q ss_pred cceeeeecCceEEEEEEEC------CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEe
Q 046083 494 MGNKIGQGGFGAVFYAELR------GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYI 563 (790)
Q Consensus 494 ~~~~lG~G~fg~Vy~a~~~------g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~ 563 (790)
..++||+|.||+||+|.+- +-+||+|++.. +...++.+|+-+|.+++|||+++|+|+|....+.||.+||
T Consensus 700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~m 779 (1177)
T KOG1025|consen 700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLM 779 (1177)
T ss_pred hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhc
Confidence 4689999999999999874 34789998853 4567899999999999999999999999988899999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
+.|+|.+|++.. +..+.-...+.+..|||+||.|||.++. |||||..+|||+.....+||.|||+++.+.....+.
T Consensus 780 P~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qrl---VHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey 855 (1177)
T KOG1025|consen 780 PLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQRL---VHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEY 855 (1177)
T ss_pred ccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcch---hhhhhhhhheeecCCCeEEEEecchhhccCcccccc
Confidence 999999999875 3568889999999999999999999998 999999999999999999999999999887665544
Q ss_pred ccc-cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 644 HTR-LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 644 ~~~-~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
... ..-.+.|||-|.+....++.++|||||||.+|||+| |..|+..... +.+.+++
T Consensus 856 ~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~----------------------~eI~dll 913 (1177)
T KOG1025|consen 856 SAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA----------------------EEIPDLL 913 (1177)
T ss_pred cccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH----------------------HHhhHHH
Confidence 332 234678999999999999999999999999999998 8888755322 2333444
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCc
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSE 770 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~ 770 (790)
....+-.-|+-+..++..++.+||..|+..||+++++...+.+.+....
T Consensus 914 e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 914 EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 4333344566788899999999999999999999999999998776555
No 167
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.4e-34 Score=313.07 Aligned_cols=236 Identities=28% Similarity=0.455 Sum_probs=187.4
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|... ++.+|+|.++.. ..+.+..|..++... +||||+++++++.. +..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999886 678999998643 223456677777654 89999999998764 468999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++.... .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~i---vH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGI---IYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAS 154 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCE---EeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Cccc
Confidence 99999997644 58999999999999999999999997 999999999999999999999999997543222 2223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~--------------- 211 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--------DELFDSILND--------------- 211 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcC---------------
Confidence 45789999999999988999999999999999999999999864321 1111221111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMR-AIVV 760 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl~ 760 (790)
...++......+.+++.+||+.+|.+||++. ++++
T Consensus 212 ~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 212 RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 0112233445678999999999999999975 5544
No 168
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.1e-34 Score=314.52 Aligned_cols=237 Identities=28% Similarity=0.453 Sum_probs=190.4
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|+.. ++.+|+|.++.. ..+.+..|.+++..+ +||||+++++++.+ +..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999986 778999998643 234577888888877 69999999998875 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++.... .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~i---vH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKGI---IYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTS 154 (320)
T ss_pred chHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-Cccc
Confidence 99999987653 58999999999999999999999998 999999999999999999999999987532221 1223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~--------~~~~~~i~~~~-------------- 212 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDE-------------- 212 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCC--------------
Confidence 45789999999999988999999999999999999999999964322 11222222111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCH------HHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSM------RAIVVA 761 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~------~evl~~ 761 (790)
...+......+.+++.+||+.||++||++ ++++.+
T Consensus 213 -~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 213 -VVYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 01122344578899999999999999998 666553
No 169
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3e-34 Score=303.31 Aligned_cols=244 Identities=34% Similarity=0.574 Sum_probs=191.2
Q ss_pred eeeeecCceEEEEEEEC--Cc--eEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEecC-eEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GE--KAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVEG-SLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~--~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~-~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|.+. +. .+++|.++. ...+.+.+|++++.++ +||||+++++++... ..+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999885 32 468888763 2345788999999999 899999999998754 58999999999
Q ss_pred CChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeC
Q 046083 566 GNLNQHLRGSG--------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFG 631 (790)
Q Consensus 566 g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfG 631 (790)
|+|.+++.... ...+++..+..++.+++.||+|||++++ +|+||||+|||+++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i---~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCE---eecccccceEEEcCCCeEEECCCC
Confidence 99999997532 1347899999999999999999999987 999999999999999999999999
Q ss_pred CCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcC
Q 046083 632 LAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQ 710 (790)
Q Consensus 632 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 710 (790)
++........ ......+..|+|||++....++.++||||||+++|||++ |..||..... .........
T Consensus 158 l~~~~~~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--------~~~~~~~~~- 226 (270)
T cd05047 158 LSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELYEKLPQ- 226 (270)
T ss_pred Cccccchhhh--ccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--------HHHHHHHhC-
Confidence 9864321111 111233567999999988899999999999999999997 9999854321 111111111
Q ss_pred CCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 711 PDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 711 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
......+......+.+++.+||+.+|.+|||+.++++.|..+.
T Consensus 227 -------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 -------------GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -------------CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1111112234457889999999999999999999999998753
No 170
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1e-34 Score=314.98 Aligned_cols=238 Identities=31% Similarity=0.454 Sum_probs=191.5
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|+.. ++.+|+|.++.. ..+.+..|.+++..+ +||||+++++++.+ +..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999886 678999998643 234567888888876 79999999998875 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|..++.... .+++..+..++.+++.||.|||++++ +||||||+|||++.++.+||+|||++....... ....
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHGV---IYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTT 154 (321)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHeEECCCCCEEEeecccceecccCC-cccc
Confidence 99999987643 58899999999999999999999998 999999999999999999999999987543222 1223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~--------~~~~~~i~~~~-------------~ 213 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE--------DDLFESILHDD-------------V 213 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCC-------------C
Confidence 45689999999999988999999999999999999999999965332 11222222111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCC-------CHHHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRP-------SMRAIVVAL 762 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RP-------t~~evl~~L 762 (790)
..+.....++.+++.+||+.||++|| ++++++++-
T Consensus 214 --~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 214 --LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred --CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence 11222345788999999999999999 788887653
No 171
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.2e-34 Score=307.21 Aligned_cols=251 Identities=29% Similarity=0.486 Sum_probs=198.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SL 556 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~ 556 (790)
.++|++.+.||+|+||.||+|... +..+|+|.+... ..+++.+|+.++.+++|||++++++++.++ ..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467899999999999999999863 468999988643 245688999999999999999999988754 58
Q ss_pred EEEEEEecCCChhhhhhcCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCC
Q 046083 557 FLVYEYIENGNLNQHLRGSG--------------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPAN 616 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~N 616 (790)
+++|||+++|+|.+++.... ...+++..++.++.+++.||.|||+.++ +||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i---~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKF---VHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCe---ecccccHhh
Confidence 99999999999999997421 1347899999999999999999999997 999999999
Q ss_pred EEecCCCcEEEEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCcccccccccc
Q 046083 617 ILIDKNFRAKVADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETI 694 (790)
Q Consensus 617 ILl~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~ 694 (790)
||+++++.++|+|||++........ ........+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999875432211 11112234667999999998899999999999999999997 7778753321
Q ss_pred ccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 695 TESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
......+.. ... ...+...+.++.+++.+||+.+|++|||+.|+++.|++
T Consensus 239 ------~~~~~~~~~-------------~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 ------EEVIYYVRD-------------GNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ------HHHHHHHhc-------------CCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 111111111 111 11122345678999999999999999999999998863
No 172
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.9e-34 Score=319.44 Aligned_cols=261 Identities=24% Similarity=0.362 Sum_probs=197.4
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC------eEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG------SLF 557 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~ 557 (790)
+|++.+.||+|+||.||++... ++.+|+|++.. ...+.+.+|+++++.++|+||+++++++... ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999874 88999998853 2345688999999999999999999988643 579
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
+||||+. ++|.+++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~i---vH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGI---LHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999997 4888887653 358999999999999999999999998 999999999999999999999999998654
Q ss_pred cCCcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 638 VGSASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 638 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
...........++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ............+.. +.
T Consensus 155 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~i~~~~g~~~~-~~ 228 (372)
T cd07853 155 PDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-----QQLDLITDLLGTPSL-EA 228 (372)
T ss_pred cCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHHHcCCCCH-HH
Confidence 3333333345678999999998764 4799999999999999999999999654321 011111111111110 00
Q ss_pred h-------hhhcCCc-CC-C------CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 717 L-------QRLVDPR-LG-D------DYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 717 l-------~~~~d~~-l~-~------~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+ ...+... .. . ........++.+++.+||+.||++|||++|++++-+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 0 0000000 00 0 011223457889999999999999999999998654
No 173
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2e-34 Score=303.77 Aligned_cols=249 Identities=25% Similarity=0.420 Sum_probs=195.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
++|++.+.||+|+||.||+|... ++.+|+|.+... ....+.+|+.++++++||||+++++++.. +..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 56889999999999999999974 778999988642 34567889999999999999999998864 5689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.++++..+ .+++..+..++.|++.||.|||+.++ +||||+|+||+++.++.+||+|||++........ .
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-~ 162 (267)
T cd06646 89 GGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKGK---MHRDIKGANILLTDNGDVKLADFGVAAKITATIA-K 162 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEEECCCCCEEECcCccceeeccccc-c
Confidence 9999999987543 58999999999999999999999998 9999999999999999999999999986532221 1
Q ss_pred ccccccCCCccchhccc---CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 644 HTRLVGTFGYMPPEYAQ---YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~---~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.....++..|+|||.+. ...++.++|||||||++|||++|+.|+....... ....... ...
T Consensus 163 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~-----------~~~~~~~-----~~~ 226 (267)
T cd06646 163 RKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR-----------ALFLMSK-----SNF 226 (267)
T ss_pred cCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh-----------hheeeec-----CCC
Confidence 22346788999999884 3457889999999999999999999985432110 0000000 000
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
..+... .....+..+.+++.+||+.+|++|||++++++.|
T Consensus 227 ~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 227 QPPKLK--DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCCc--cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 001110 0112346788999999999999999999998765
No 174
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.2e-34 Score=306.70 Aligned_cols=265 Identities=22% Similarity=0.424 Sum_probs=200.7
Q ss_pred cCcccceeeeecCceEEEEEEEC------CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC---eE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR------GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG---SL 556 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~------g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~---~~ 556 (790)
+.|.+.+.||+|+||.||++.+. +..+|+|.++. ...+.+.+|+++++.++|||++++++++.+. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 45788999999999999999742 67899999863 2345789999999999999999999988753 47
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
++||||+++++|.+++.... ..+++..++.++.+++.||+|||++++ +||||||+||+++.++.++|+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~gi---~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCe---eecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999997543 358999999999999999999999998 99999999999999999999999999865
Q ss_pred ccCCcc--cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 637 EVGSAS--VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 637 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
...... ......++..|+|||++.+..++.++||||||+++|||++++.|............. .. ......
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~------~~-~~~~~~ 232 (284)
T cd05079 160 ETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIG------PT-HGQMTV 232 (284)
T ss_pred ccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcc------cc-cccccH
Confidence 432221 112345677899999999889999999999999999999987764332111000000 00 000000
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
......+........+...+..+.+++.+||+.+|.+|||++++++.|..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 001111111111122234557899999999999999999999999999865
No 175
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-34 Score=322.35 Aligned_cols=246 Identities=24% Similarity=0.304 Sum_probs=190.9
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
+|+..+.||+|+||.||+|+.. ++.+|+|.+... ..+.+.+|++++++++|+||+++++.+.+ ...++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5889999999999999999875 788999998743 23568899999999999999999998875 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC-
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS- 640 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~- 640 (790)
|+++|+|.+++...+ .+++.....++.|++.||+|||++++ +||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~i---vHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMGF---IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 999999999997643 58888999999999999999999998 999999999999999999999999975321000
Q ss_pred ---------------------------------------------cccccccccCCCccchhcccCCCCCchhhHHHHHH
Q 046083 641 ---------------------------------------------ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGV 675 (790)
Q Consensus 641 ---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gv 675 (790)
........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00011246899999999999999999999999999
Q ss_pred HHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-
Q 046083 676 VLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS- 754 (790)
Q Consensus 676 vl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt- 754 (790)
++|||++|+.||...... .....+.... ..+..........++.+++.+|+ .+|++|++
T Consensus 237 il~elltG~~Pf~~~~~~--------~~~~~i~~~~-----------~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~ 296 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPL--------ETQMKVINWQ-----------TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGK 296 (382)
T ss_pred HHHHHHhCCCCCCCCCHH--------HHHHHHHccC-----------CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCC
Confidence 999999999999653221 1111111100 00100111123345667777766 49999987
Q ss_pred --HHHHHHH
Q 046083 755 --MRAIVVA 761 (790)
Q Consensus 755 --~~evl~~ 761 (790)
++|++++
T Consensus 297 ~~~~ei~~h 305 (382)
T cd05625 297 NGADEIKAH 305 (382)
T ss_pred CCHHHHhcC
Confidence 8887764
No 176
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.7e-34 Score=308.71 Aligned_cols=270 Identities=25% Similarity=0.399 Sum_probs=203.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~ 562 (790)
++|++.+.||+|+||.||++... +..+++|.++.. ...++.+|++++++++||||+++++++. ++..+++|||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46899999999999999999876 678899887642 2356889999999999999999999887 4568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
+++++|.+++... ..+++..+..++.++++||.|||+ .++ +|+||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i---~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKI---MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCE---EECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence 9999999999865 358899999999999999999998 466 999999999999999999999999987543221
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC--------
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP-------- 713 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 713 (790)
.....++..|+|||.+.+..++.++|+||||+++|||++|+.||...... .....+.........
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK-----ELEAMFGRPVSEGEAKESHRPVS 227 (308)
T ss_pred --cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh-----hHHHhhcCccccccccCCccccc
Confidence 22356889999999998888999999999999999999999998543211 000000000000000
Q ss_pred ------------hhhhhhhcCCcCCCCCC-HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCC
Q 046083 714 ------------REDLQRLVDPRLGDDYP-IDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWD 773 (790)
Q Consensus 714 ------------~~~l~~~~d~~l~~~~~-~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~ 773 (790)
.+.....+.. .....+ ......+.+++.+||+.+|++|||+++++++.+-.....++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~ 299 (308)
T cd06615 228 GHPPDSPRPMAIFELLDYIVNE-PPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELEEVD 299 (308)
T ss_pred CCCCCccchhhHHHHHHHHhcC-CCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccccch
Confidence 0000011100 001111 1234568999999999999999999999998776444334443
No 177
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.4e-34 Score=314.24 Aligned_cols=241 Identities=27% Similarity=0.445 Sum_probs=192.9
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~ 560 (790)
+|.+.+.||+|+||.||+|... +..+|+|.++.. ..+.+..|.+++..+ +|++|+++++++.+ +..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5888999999999999999886 678999998643 223466788888777 58899999988775 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~i---vHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKGI---IYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCE---EecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 9999999999987653 48899999999999999999999997 999999999999999999999999987532211
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--------~~~~~~i~~~---------- 216 (323)
T cd05616 156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEH---------- 216 (323)
T ss_pred -CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC----------
Confidence 122345789999999999999999999999999999999999999964322 1122222211
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSM-----RAIVV 760 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~-----~evl~ 760 (790)
. ..++.....++.+++.+|++.+|.+|++. +++.+
T Consensus 217 ---~--~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 217 ---N--VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred ---C--CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 1 12233445678899999999999999984 56654
No 178
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.4e-34 Score=308.23 Aligned_cols=256 Identities=26% Similarity=0.470 Sum_probs=195.6
Q ss_pred cCcccceeeeecCceEEEEEEECC----------------ceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELRG----------------EKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIG 549 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~g----------------~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g 549 (790)
++|++.+.||+|+||.||++...+ ..+|+|.++.. ..+.|.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578999999999999999987532 24899988642 3356889999999999999999999
Q ss_pred EEec-CeEEEEEEEecCCChhhhhhcCC----------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEE
Q 046083 550 YCVE-GSLFLVYEYIENGNLNQHLRGSG----------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANIL 618 (790)
Q Consensus 550 ~~~~-~~~~lv~e~~~~g~L~~~l~~~~----------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NIL 618 (790)
++.. ...++||||+++++|.+++.... ...+++..+++++.+++.||+|||++++ +|+||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i---~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNF---VHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCe---eccccChhhEE
Confidence 9874 45899999999999999986532 1247899999999999999999999998 99999999999
Q ss_pred ecCCCcEEEEEeCCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh--CCccccccccccc
Q 046083 619 IDKNFRAKVADFGLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS--AMEAVVKTNETIT 695 (790)
Q Consensus 619 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt--G~~p~~~~~~~~~ 695 (790)
+++++.+||+|||++........ .......++..|+|||.+....++.++||||||++++||++ |..||......
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~-- 239 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE-- 239 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH--
Confidence 99999999999999976533221 11222345678999999998899999999999999999998 45565432211
Q ss_pred cccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 696 ESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
............. ........+...+..+.+++.+||+.+|++||++++|++.|.
T Consensus 240 ---~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 ---QVIENTGEFFRNQ----------GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred ---HHHHHHHHhhhhc----------cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 0110001111000 000001112224467999999999999999999999999886
No 179
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=3.5e-34 Score=300.12 Aligned_cols=244 Identities=26% Similarity=0.438 Sum_probs=196.4
Q ss_pred eeeeecCceEEEEEEEC---Cc--eEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecCC
Q 046083 496 NKIGQGGFGAVFYAELR---GE--KAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~---g~--~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~g 566 (790)
+.||+|++|.||+|.+. +. .+|+|.+... ..+.+.+|++.+++++||||+++++++.+...+++|||++++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG 80 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence 46899999999999874 22 5899998753 345789999999999999999999988877789999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc--cc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS--VH 644 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~--~~ 644 (790)
+|.+++.......++|...+.++.|++.||+|||++++ +|+||+|+||+++.++.+||+|||+++........ ..
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 157 (257)
T cd05040 81 SLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF---IHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVME 157 (257)
T ss_pred cHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc---cccccCcccEEEecCCEEEeccccccccccccccceecc
Confidence 99999987543468999999999999999999999998 99999999999999999999999999876432221 11
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
....++..|+|||++....++.++||||||+++|||++ |+.||..... ............
T Consensus 158 ~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--------~~~~~~~~~~~~----------- 218 (257)
T cd05040 158 EHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG--------SQILKKIDKEGE----------- 218 (257)
T ss_pred cCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHhcCC-----------
Confidence 12456789999999998899999999999999999999 9999854321 111111111100
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
....+...+..+.+++.+||+.+|++||++.++++.|.
T Consensus 219 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 --RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred --cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 01112234567899999999999999999999998875
No 180
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-34 Score=324.69 Aligned_cols=264 Identities=20% Similarity=0.273 Sum_probs=195.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
...|.+.+.||+|+||.||++... ++.||||.... ..+.+|+++|++++|+||+++++++.. +..++|||++.
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 346999999999999999999986 67899996433 346689999999999999999998764 56899999995
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc-cc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS-VH 644 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~-~~ 644 (790)
++|.+++.... ..++|..++.++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++........ ..
T Consensus 244 ~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gI---vHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~ 319 (461)
T PHA03211 244 SDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEGI---IHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH 319 (461)
T ss_pred CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCE---EECcCCHHHEEECCCCCEEEcccCCceecccccccccc
Confidence 68998887543 369999999999999999999999997 99999999999999999999999999865432211 22
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC------C---hh
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD------P---RE 715 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~ 715 (790)
....||..|+|||++.+..++.++|||||||+||||++|..++........... .......++.... . ..
T Consensus 320 ~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~-~~~~l~~~i~~~~~~~~~~~~~~~~ 398 (461)
T PHA03211 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRP-YDAQILRIIRQAQVHVDEFPQHAGS 398 (461)
T ss_pred cccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCC-cHHHHHHHHHhhccccccCCCCcch
Confidence 245689999999999999999999999999999999998877654332111111 1111111111100 0 00
Q ss_pred hh-hhhc---CCcCCCCCC-------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 716 DL-QRLV---DPRLGDDYP-------IDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 716 ~l-~~~~---d~~l~~~~~-------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.+ ..+. ......... ......+.+|+.+||+.||.+|||+.|++++
T Consensus 399 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 399 RLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 0000 000000000 0122367899999999999999999999975
No 181
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.5e-34 Score=299.12 Aligned_cols=245 Identities=26% Similarity=0.452 Sum_probs=198.8
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec--CeEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE--GSLFLVYE 561 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~~~~lv~e 561 (790)
+|++.+.||+|++|.||++... ++.+++|++.. ...+.+.+|++++++++|+|++++++.+.. ...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999875 67899999853 233568889999999999999999987653 34789999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+++++|.+++.......+++.++..++.+++.|++|||+.++ +|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i---~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHI---LHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 9999999999987544568999999999999999999999998 999999999999999999999999998654322
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
.......+++.|+|||.+.+..++.++||||||++++||++|+.||..... ...........
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~--------~~~~~~~~~~~---------- 218 (257)
T cd08223 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM--------NSLVYRIIEGK---------- 218 (257)
T ss_pred CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhcC----------
Confidence 122335678999999999999999999999999999999999999853221 11111111110
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+ ...+......+.+++.+|++.+|++|||+.+++++
T Consensus 219 ---~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 219 ---L-PPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---C-CCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 11223445678999999999999999999999864
No 182
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.9e-35 Score=317.85 Aligned_cols=233 Identities=26% Similarity=0.376 Sum_probs=188.4
Q ss_pred eeeeecCceEEEEEEE-----CCceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEec
Q 046083 496 NKIGQGGFGAVFYAEL-----RGEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIE 564 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~-----~g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~ 564 (790)
+.||+|+||.||++.. .++.+|+|.++.. ....+..|++++++++||||+++++++.+ +..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 6799999999999875 2688999998743 23456789999999999999999998874 46899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+|+|.+++.... .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++...... ...
T Consensus 82 ~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~ 155 (318)
T cd05582 82 GGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGI---IYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKA 155 (318)
T ss_pred CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-Cce
Confidence 999999997643 58999999999999999999999998 999999999999999999999999998653321 122
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ......+... .
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~--------~~~~~~i~~~-------------~ 214 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR--------KETMTMILKA-------------K 214 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH--------HHHHHHHHcC-------------C
Confidence 345789999999999988899999999999999999999999864321 1111122111 0
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRA 757 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 757 (790)
...+......+.+++.+||+.||++||++.+
T Consensus 215 --~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 215 --LGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred --CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1122234457889999999999999999544
No 183
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=3.1e-34 Score=303.73 Aligned_cols=250 Identities=25% Similarity=0.433 Sum_probs=198.7
Q ss_pred cCcccceeeeecCceEEEEEEEC-------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLF 557 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~ 557 (790)
++|+....||+|+||.||+|+.+ ...+++|.+... ..+++.+|++++++++|+|++++++++.+. ..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888999999999999999864 356899988642 245789999999999999999999998754 589
Q ss_pred EEEEEecCCChhhhhhcCCC-------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEe
Q 046083 558 LVYEYIENGNLNQHLRGSGK-------DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADF 630 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~-------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~Df 630 (790)
+||||+++|+|.+++..... ..+++..+..++.+++.||+|||++++ +||||||+||+++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i---~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARF---VHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCc---ccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999976441 258999999999999999999999998 99999999999999999999999
Q ss_pred CCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHc
Q 046083 631 GLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLR 709 (790)
Q Consensus 631 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
|++...............++..|+|||.+.+..++.++||||||+++|||++ |..||...... ........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--------~~~~~~~~ 233 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--------EVLNRLQA 233 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--------HHHHHHHc
Confidence 9987543222222223456778999999988889999999999999999998 77777432210 11111111
Q ss_pred CCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 710 QPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 710 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..+....+...+..+.+++.+||+.+|.+|||+.|++..|+
T Consensus 234 -------------~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 234 -------------GKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred -------------CCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 11111112234567899999999999999999999999886
No 184
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.3e-34 Score=306.80 Aligned_cols=249 Identities=26% Similarity=0.411 Sum_probs=198.3
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
.|+..+.||+|+||.||++... ++.+|+|.+... ..+.+..|+.++++++|+|++++++.+.+ ...++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677899999999999999886 789999988642 12456789999999999999999998764 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+++++|.+++...+...+++..+..++.|++.||.|||+.++ +||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---iH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERI---VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCE---EeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 9999999999976555569999999999999999999999997 999999999999999999999999987543222
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
......|+..|+|||++.+..++.++||||||+++|||++|+.||....... ...........
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-----~~~~~~~~~~~----------- 219 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-----KREEVERLVKE----------- 219 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-----hHHHHHhhhhh-----------
Confidence 1223468999999999999999999999999999999999999996533210 00000111100
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPS-----MRAIVVALM 763 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~L~ 763 (790)
....++......+.+++.+||+.||++||| ++|++++-+
T Consensus 220 ---~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 220 ---VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred ---hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 001112233456889999999999999999 888887544
No 185
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5e-34 Score=299.85 Aligned_cols=245 Identities=27% Similarity=0.459 Sum_probs=190.3
Q ss_pred eeeeecCceEEEEEEEC-----CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEe--cCeEEEEEEEec
Q 046083 496 NKIGQGGFGAVFYAELR-----GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCV--EGSLFLVYEYIE 564 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~-----g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~~lv~e~~~ 564 (790)
+.||+|+||.||+|.+. +..+|+|.+.. ...+.+.+|+.+++.++|||++++++++. ++..+++|||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999863 34689998753 23467889999999999999999999875 344799999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc---
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA--- 641 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~--- 641 (790)
+|+|.+++.... ..+++..+..++.+++.||.|||+.++ +||||||+|||+++++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKF---VHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCc---cccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 999999997643 246788889999999999999999998 9999999999999999999999999975432111
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCC-ccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAM-EAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.......++..|+|||.+.+..++.++||||||+++|||++|. +|+.... ............
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--------~~~~~~~~~~~~--------- 219 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--------SFDITVYLLQGR--------- 219 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--------HHHHHHHHhcCC---------
Confidence 1112234567899999998889999999999999999999964 4443211 111111111110
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
....+...+..+.+++.+||+.+|++||++.||+..|+.+.
T Consensus 220 -----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 220 -----RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred -----CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 00111223457889999999999999999999999998764
No 186
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.1e-34 Score=312.14 Aligned_cols=237 Identities=30% Similarity=0.490 Sum_probs=191.4
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||++... +..+|+|.++.. ....+..|.+++..+ +||||+++++++.+ +..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999886 678999998743 234567888899888 79999999998774 468999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++...+ .+++..+..++.|++.||.|||+.++ +||||||+|||+++++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i---vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERGI---IYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTTS 154 (318)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---EccCCCHHHeEECCCCcEEecccCCCeecCcCC-Cccc
Confidence 99999987653 58999999999999999999999998 999999999999999999999999987532211 1123
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+....
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--------~~~~~~i~~~~-------------- 212 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--------DELFQSILEDE-------------- 212 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--------HHHHHHHHcCC--------------
Confidence 35689999999999999999999999999999999999999864321 11122221110
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCH-----HHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSM-----RAIVVA 761 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~-----~evl~~ 761 (790)
..++......+.+++.+||+.||.+||++ .+++++
T Consensus 213 -~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 213 -VRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred -CCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 11222345678899999999999999999 887764
No 187
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.2e-34 Score=314.72 Aligned_cols=232 Identities=27% Similarity=0.442 Sum_probs=185.0
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHH-HHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELK-VLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~-~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|... ++.+|+|.+.... .+++..|.. +++.++||||+++++++.+ ...++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999985 7899999986432 234455544 5678899999999998764 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++.... .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~gi---vH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (323)
T cd05575 81 GELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLNI---IYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTS 154 (323)
T ss_pred CCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCccc
Confidence 99999997643 58899999999999999999999998 99999999999999999999999998753221 12223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|..||..... ......+.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--------~~~~~~i~~~~-------------~ 213 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT--------AEMYDNILNKP-------------L 213 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH--------HHHHHHHHcCC-------------C
Confidence 45789999999999999999999999999999999999999864321 12222222211 1
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMR 756 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 756 (790)
..+......+.+++.+||+.||.+||+++
T Consensus 214 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 214 --RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred --CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 11223356788999999999999999984
No 188
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-34 Score=312.19 Aligned_cols=255 Identities=26% Similarity=0.466 Sum_probs=201.0
Q ss_pred cCcccceeeeecCceEEEEEEEC---------CceEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEecC-
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR---------GEKAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVEG- 554 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~---------g~~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~- 554 (790)
.+|++.+.||+|+||.||++... +..+|+|.++. ...+++.+|++++.++ +|+||+++++++.++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46889999999999999999752 12689998763 2346788999999999 799999999998754
Q ss_pred eEEEEEEEecCCChhhhhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEec
Q 046083 555 SLFLVYEYIENGNLNQHLRGSG--------------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILID 620 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~ 620 (790)
..+++|||+++|+|.+++.... ...++|..+++++.|++.||.|||++++ +||||||+|||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi---vH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC---IHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCe---eccccccceEEEc
Confidence 5899999999999999987532 2358899999999999999999999998 9999999999999
Q ss_pred CCCcEEEEEeCCCcccccCCccc-ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCcccccccccccccc
Q 046083 621 KNFRAKVADFGLAKLTEVGSASV-HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITEST 698 (790)
Q Consensus 621 ~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~ 698 (790)
+++.+||+|||+++......... .....++..|+|||.+.+..++.++||||||+++|||++ |..||....
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------- 241 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------- 241 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-------
Confidence 99999999999998654322111 112234567999999999999999999999999999998 778774322
Q ss_pred chHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCC
Q 046083 699 GLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSS 769 (790)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~ 769 (790)
.......+... .....+......+.+++.+||+.+|.+||++.|+++.|..+....
T Consensus 242 -~~~~~~~~~~~--------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 242 -VEELFKLLKEG--------------HRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred -HHHHHHHHHcC--------------CCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 11111111111 111223344567889999999999999999999999999876444
No 189
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=4.2e-34 Score=304.72 Aligned_cols=247 Identities=25% Similarity=0.381 Sum_probs=196.1
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
.|+..+.||+|+||+||++... ++.+|+|.+... ..+.+.+|++++++++|+|++++++++.. +..+++||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 3677899999999999999886 789999998642 22447789999999999999999987764 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+++++|.+++...+...+++..+..++.|++.||.|||+.++ +||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i---iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT---VYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 9999999999876555579999999999999999999999998 999999999999999999999999997653221
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
......|+..|+|||++.+..++.++|+||||+++|||++|..||....... ...........
T Consensus 157 -~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~----~~~~~~~~~~~------------ 219 (285)
T cd05632 157 -SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV----KREEVDRRVLE------------ 219 (285)
T ss_pred -cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHhhhc------------
Confidence 1233568999999999998899999999999999999999999986432210 00000000000
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPS-----MRAIVVA 761 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~ 761 (790)
. ...++......+.+|+..||+.||++||+ +++++.+
T Consensus 220 -~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 220 -T--EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred -c--ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 0 01122234456889999999999999999 5666654
No 190
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.4e-34 Score=311.22 Aligned_cols=236 Identities=28% Similarity=0.454 Sum_probs=188.2
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|... ++.+|+|.++.. ..+.+..|..++... +||||+++++++.+ +..|+||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999986 789999998753 234466788888765 89999999998875 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++.... .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i---vHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKGI---IYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD-NRAS 154 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHeEECCCCCEEeCccCCCeecccCC-Ccee
Confidence 99999987643 58899999999999999999999998 999999999999999999999999987432211 2223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--------~~~~~~~~~~-----------~~-- 213 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--------DELFESIRVD-----------TP-- 213 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC-----------CC--
Confidence 46789999999999999999999999999999999999999964321 1112221111 01
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMR-AIVV 760 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl~ 760 (790)
..+.....++.+++.+||+.||++||++. ++.+
T Consensus 214 --~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 214 --HYPRWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred --CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 11222345688999999999999999984 5653
No 191
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=6.8e-34 Score=299.81 Aligned_cols=245 Identities=24% Similarity=0.392 Sum_probs=193.5
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--------hhHHHHHHHHHHHHhcCCCCCcceEEEEec---CeE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--------QASKEFLAELKVLTHVHHLNLVRLIGYCVE---GSL 556 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~ 556 (790)
.+|+..+.||+|+||.||+|... +..+++|.+.. ...+.+.+|+.++++++||||+++++++.+ ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47889999999999999999875 78999998752 223468889999999999999999998764 347
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
+++|||+++++|.+++.... .+++...+.++.|++.||.|||+.++ +|+||+|+||+++.++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i---~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMI---VHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 89999999999999997643 48899999999999999999999997 99999999999999999999999999865
Q ss_pred ccCCc--ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 637 EVGSA--SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 637 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
..... .......++..|+|||.+.+..++.++|||||||++|||++|+.||...... ........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~--------~~~~~~~~----- 223 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM--------AAIFKIAT----- 223 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH--------HHHHHHhc-----
Confidence 32111 1112345788999999999889999999999999999999999998643210 00111111
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.......+......+.+++ +||..+|++||+++||+.+
T Consensus 224 --------~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 224 --------QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred --------CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 0111222333445566777 6888999999999999763
No 192
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.4e-34 Score=311.28 Aligned_cols=252 Identities=24% Similarity=0.355 Sum_probs=194.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|++.+.||+|+||.||++... ++.+|+|.++.. ..+.+.+|..++..++|+||+++++++.+ +..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47899999999999999999876 789999998642 23457889999999999999999998875 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++.... ..+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVLAIDSVHQLGY---VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe---EECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 9999999999997532 358899999999999999999999998 999999999999999999999999987654332
Q ss_pred cccccccccCCCccchhcccC-----CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQY-----GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
........|++.|+|||++.. ..++.++|||||||++|||++|+.||..... ......+......
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~--------~~~~~~i~~~~~~-- 226 (331)
T cd05597 157 TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNHKEH-- 226 (331)
T ss_pred CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH--------HHHHHHHHcCCCc--
Confidence 222233568999999999863 4578899999999999999999999854321 1222222221100
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHcccc--CCCCCCCHHHHHHHHH
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQE--NPQLRPSMRAIVVALM 763 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~--dP~~RPt~~evl~~L~ 763 (790)
. .+... ....+..+.+++.+|+.. ++..||++++++++-+
T Consensus 227 -----~--~~~~~-~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~ 268 (331)
T cd05597 227 -----F--QFPPD-VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPF 268 (331)
T ss_pred -----c--cCCCc-cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCC
Confidence 0 00000 112345677888887754 3344889999988743
No 193
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=5.5e-34 Score=305.51 Aligned_cols=258 Identities=28% Similarity=0.499 Sum_probs=197.2
Q ss_pred hcCcccceeeeecCceEEEEEEEC------------------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcc
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR------------------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVR 546 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~------------------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~ 546 (790)
.++|++.+.||+|+||.||++... +..+|+|.+... ...++.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 357899999999999999998532 235899988642 3457899999999999999999
Q ss_pred eEEEEec-CeEEEEEEEecCCChhhhhhcCCC---------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCC
Q 046083 547 LIGYCVE-GSLFLVYEYIENGNLNQHLRGSGK---------DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPAN 616 (790)
Q Consensus 547 l~g~~~~-~~~~lv~e~~~~g~L~~~l~~~~~---------~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~N 616 (790)
+++++.. +..+++|||+++++|.+++..... ..+++.++++++.+++.||+|||++++ +|+||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i---~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNF---VHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCe---ecccCChhe
Confidence 9998875 458999999999999999876421 247888999999999999999999997 999999999
Q ss_pred EEecCCCcEEEEEeCCCcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh--CCccccccccc
Q 046083 617 ILIDKNFRAKVADFGLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS--AMEAVVKTNET 693 (790)
Q Consensus 617 ILl~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt--G~~p~~~~~~~ 693 (790)
||++.++.++|+|||+++.+...... ......++..|++||....+.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 99999999999999999865332211 1122344678999999888899999999999999999998 66777543221
Q ss_pred cccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 694 ITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
............. ........+..++..+.+++.+||+.||.+||++.||++.|++
T Consensus 241 -----~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 241 -----QVIENTGEFFRDQ----------GRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred -----HHHHHHHHHHhhc----------cccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0110001111000 0000011122344678999999999999999999999998863
No 194
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.7e-34 Score=297.50 Aligned_cols=247 Identities=26% Similarity=0.418 Sum_probs=200.8
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh-HHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecC
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA-SKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIEN 565 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~ 565 (790)
++|++.+.||+|+||.||+|... +..+++|.++... .+++.+|++++++++|+|++++++++.+. ..++++||+.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence 57889999999999999999986 6889999987543 67899999999999999999999988754 58999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|.+++.... ..+++..+..++.+++.||.|||+.++ +|+||+|+||+++.++.+||+|||++........ ...
T Consensus 83 ~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~i---~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~ 157 (256)
T cd06612 83 GSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNKK---IHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-KRN 157 (256)
T ss_pred CcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCcceEEECCCCcEEEcccccchhcccCcc-ccc
Confidence 99999997543 468999999999999999999999998 9999999999999999999999999986543321 222
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...++..|+|||.+.+..++.++||||||+++|||++|+.||....... ....... ...+.
T Consensus 158 ~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~--------~~~~~~~----------~~~~~- 218 (256)
T cd06612 158 TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR--------AIFMIPN----------KPPPT- 218 (256)
T ss_pred cccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh--------hhhhhcc----------CCCCC-
Confidence 3457889999999998899999999999999999999999986432210 0000000 00000
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...+......+.+++.+||+.+|.+|||++|++++
T Consensus 219 -~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 219 -LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred -CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 11122344678999999999999999999999863
No 195
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5e-34 Score=302.07 Aligned_cols=246 Identities=26% Similarity=0.418 Sum_probs=199.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~ 562 (790)
++|++.+.||.|+||.||+|... ++.+++|.+... ....+.+|+++++.++|+|++++++++.++ ..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888899999999999999875 789999988643 335688999999999999999999987754 58999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++... .+++..+..++.|++.||.|||+.++ +|+||+|+||++++++.++|+|||+++...... .
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i---~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~ 153 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGK---IHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-S 153 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEEECCCCCEEEcccccceeecccc-c
Confidence 9999999999854 68999999999999999999999998 999999999999999999999999998765332 1
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
......++..|+|||++.+..++.++||||||+++|||++|+.||...... ........ ...
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--------~~~~~~~~----------~~~ 215 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--------RVLFLIPK----------NNP 215 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--------HHHHHhhh----------cCC
Confidence 223356788999999999888999999999999999999999998543211 00111110 011
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+.+... ..+..+.+++.+||..+|++|||+++++++-.
T Consensus 216 ~~~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~ 253 (274)
T cd06609 216 PSLEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKHKF 253 (274)
T ss_pred CCCccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhChh
Confidence 111111 14456889999999999999999999988544
No 196
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.8e-34 Score=309.66 Aligned_cols=236 Identities=28% Similarity=0.459 Sum_probs=187.8
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|... ++.+|+|.++.. ..+.+..|..++... +||||+++++++.+ +..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999986 678999998753 234466788888764 89999999998875 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++.... .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~i---vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKGI---VYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTC 154 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---EeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Ccee
Confidence 99999997643 58899999999999999999999998 999999999999999999999999987532211 1223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+... .+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--------~~~~~~i~~~-----------~~-- 213 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--------EELFQSIRMD-----------NP-- 213 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC-----------CC--
Confidence 45689999999999988999999999999999999999999864321 1111111110 01
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMR-AIVV 760 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~-evl~ 760 (790)
.++......+.+++.+||+.||.+||++. ++.+
T Consensus 214 --~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 214 --CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred --CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 11222345678999999999999999997 6644
No 197
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-34 Score=296.10 Aligned_cols=247 Identities=27% Similarity=0.369 Sum_probs=203.7
Q ss_pred cCcccceeeeecCceEEEEEEECC--ceEEEEEeChhhH------HHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELRG--EKAAIKKMDMQAS------KEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~g--~~vavK~~~~~~~------~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++|++.+.||.|.-|+||.+++++ ..+|+|++..+.. .+...|-+||+.+.||.++.||+.+... ..|++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 457788999999999999999985 6899999986433 3467799999999999999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC-
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG- 639 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~- 639 (790)
|||+||+|..+++.+....+++..+..++.+++-||+|||-.|+ |.|||||+||||-++|++-|+||.|+......
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGi---vYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGI---VYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhce---eeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 99999999999999888889999999999999999999999998 99999999999999999999999987533110
Q ss_pred --------------------------------Cc----------------------ccccccccCCCccchhcccCCCCC
Q 046083 640 --------------------------------SA----------------------SVHTRLVGTFGYMPPEYAQYGEVS 665 (790)
Q Consensus 640 --------------------------------~~----------------------~~~~~~~gt~~y~aPE~~~~~~~s 665 (790)
.. .....++||-.|+|||++.+..-+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 00 001135789999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHcc
Q 046083 666 PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACT 745 (790)
Q Consensus 666 ~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl 745 (790)
.+.|+|.|||++|||+.|..||...+.. +.+..++.+.+.-.........+.+||++.|
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~---------------------~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LL 372 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNK---------------------ETLRNIVGQPLKFPEEPEVSSAAKDLIRKLL 372 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCch---------------------hhHHHHhcCCCcCCCCCcchhHHHHHHHHHh
Confidence 9999999999999999999999765432 3344444443322222355678899999999
Q ss_pred ccCCCCCCC----HHHHHH
Q 046083 746 QENPQLRPS----MRAIVV 760 (790)
Q Consensus 746 ~~dP~~RPt----~~evl~ 760 (790)
.+||.+|-. +.||-+
T Consensus 373 vKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 373 VKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred ccChhhhhccccchHHhhc
Confidence 999999987 555543
No 198
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=6.8e-34 Score=300.04 Aligned_cols=253 Identities=22% Similarity=0.369 Sum_probs=198.0
Q ss_pred HHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEE
Q 046083 484 ELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLF 557 (790)
Q Consensus 484 ~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~ 557 (790)
|++.+++++.....||+|+||.||+|.+. +..+++|.+... ..+.+.+|++++++++|+||+++++++..+ ..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34556778888899999999999999875 668999987643 445789999999999999999999998754 589
Q ss_pred EEEEEecCCChhhhhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC-CCcEEEEEeCCCc
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTL--TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK-NFRAKVADFGLAK 634 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l--~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~-~~~~kl~DfGla~ 634 (790)
++|||+++++|.+++.... ..+ ++..+..++.|++.||+|||+.++ +||||||+||+++. ++.++|+|||++.
T Consensus 82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i---~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQI---VHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCE---eecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 9999999999999998642 234 788899999999999999999997 99999999999986 6799999999987
Q ss_pred ccccCCcccccccccCCCccchhcccCCC--CCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGE--VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
....... ......++..|+|||++.... ++.++||||||+++|||++|+.||....... ...+....
T Consensus 158 ~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~------~~~~~~~~---- 226 (268)
T cd06624 158 RLAGINP-CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ------AAMFKVGM---- 226 (268)
T ss_pred ecccCCC-ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh------hhHhhhhh----
Confidence 6532221 122345788999999986643 7899999999999999999999985432110 00000000
Q ss_pred ChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 713 PREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 713 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.......+.....++.+++.+||+.+|.+|||+.|++++
T Consensus 227 ----------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 227 ----------FKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ----------hccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 001112233445678899999999999999999999864
No 199
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.2e-34 Score=304.23 Aligned_cols=247 Identities=24% Similarity=0.421 Sum_probs=198.7
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
.+|+..+.||+|+||.||+|... +..+++|.+.. ...+.+.+|+.+++.++|+|++++++++.. ...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 47888999999999999999874 78999998864 234568899999999999999999998764 5689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++... .+++.++..++.|++.||+|||+.++ +|+||||+||+++.++.+||+|||++........ .
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi---~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~ 172 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 172 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEEEcCCCCEEECccccchhcccccc-c
Confidence 999999998643 48899999999999999999999998 9999999999999999999999999876532221 1
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
.....+++.|+|||.+.+..++.++|||||||++|||++|+.||...... ..+.. ...... +
T Consensus 173 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~-------~~~~~-~~~~~~----------~ 234 (296)
T cd06654 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-------RALYL-IATNGT----------P 234 (296)
T ss_pred cCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH-------HhHHH-HhcCCC----------C
Confidence 22346788999999999888999999999999999999999998543221 01111 111000 0
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
. ...+......+.+++.+||..+|++|||++|++..-.
T Consensus 235 ~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~ 272 (296)
T cd06654 235 E--LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQF 272 (296)
T ss_pred C--CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChh
Confidence 0 1112334467889999999999999999999998543
No 200
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.5e-34 Score=310.10 Aligned_cols=236 Identities=27% Similarity=0.458 Sum_probs=189.3
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcC-CCCCcceEEEEec-CeEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVH-HLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~~~~lv~ 560 (790)
+|+..+.||+|+||.||+|... ++.+|+|.++.. ..+.+..|.+++..+. |++|+++++++.+ +..|+||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4788899999999999999875 789999998642 2345778888888885 5677788887764 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~i---vHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRGI---IYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 9999999999997644 58999999999999999999999998 999999999999999999999999987532221
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+...
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~---------- 216 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--------DELFQSIMEH---------- 216 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhC----------
Confidence 122335689999999999988999999999999999999999999865322 1122222211
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSM 755 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 755 (790)
. ..++......+.+++.+||+.+|.+|++.
T Consensus 217 ---~--~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 217 ---N--VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---C--CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1 11223344578899999999999999984
No 201
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.1e-34 Score=304.26 Aligned_cols=259 Identities=25% Similarity=0.383 Sum_probs=193.5
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhc---CCCCCcceEEEEec------C
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHV---HHLNLVRLIGYCVE------G 554 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l---~h~niv~l~g~~~~------~ 554 (790)
+|++.+.||+|+||.||+|... ++.+|+|.++.. ....+.+|+++++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788999999999999999886 788999988642 123456677777665 79999999998753 2
Q ss_pred eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
..+++|||+.+ +|.+++.......+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEECCCCCEEECccCccc
Confidence 37999999985 89998876555568999999999999999999999997 999999999999999999999999998
Q ss_pred ccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
...... ......++..|+|||++.+..++.++|||||||++|||++|++||...... ..... .......+..
T Consensus 157 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~----~~~~~-~~~~~~~~~~- 228 (288)
T cd07863 157 IYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA----DQLGK-IFDLIGLPPE- 228 (288)
T ss_pred cccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH----HHHHH-HHHHhCCCCh-
Confidence 654221 123356789999999999889999999999999999999999998543221 01111 1111111100
Q ss_pred hhhhh-------hcCCcCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 EDLQR-------LVDPRLG---DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 ~~l~~-------~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..+.. ...+... ..........+.+++.+||+.||++|||+.|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000 0000000 00112344568899999999999999999999864
No 202
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=9e-34 Score=296.94 Aligned_cols=243 Identities=31% Similarity=0.531 Sum_probs=197.9
Q ss_pred eeeeecCceEEEEEEEC-----CceEEEEEeChhh----HHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR-----GEKAAIKKMDMQA----SKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~-----g~~vavK~~~~~~----~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|... +..+++|.++... .+.+.+|++.++.++|+|++++++++.+ ...+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 46999999999999886 6689999987432 4678899999999999999999998875 458999999999
Q ss_pred CChhhhhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 566 GNLNQHLRGSG-------KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 566 g~L~~~l~~~~-------~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
++|.+++.... ...+++..+++++.+++.||.|||++++ +|+||+|+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i---~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF---VHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc---ccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999998752 2468999999999999999999999998 9999999999999999999999999987654
Q ss_pred CCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 639 GSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 639 ~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
... .......++..|+|||.+....++.++||||||++++||++ |..||..... .........
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~------- 222 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--------EEVLEYLRK------- 222 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--------HHHHHHHHc-------
Confidence 321 11223457889999999988899999999999999999999 5888865421 111111111
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
......+...+.++.+++.+||+.+|++|||+.|++..|.
T Consensus 223 -------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 223 -------GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -------CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0111223344568999999999999999999999998873
No 203
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.4e-34 Score=303.08 Aligned_cols=265 Identities=25% Similarity=0.433 Sum_probs=204.1
Q ss_pred cCcccceeeeecCceEEEEEEEC------CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec--C-eE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR------GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE--G-SL 556 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~------g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~-~~ 556 (790)
++|++.+.||+|+||.||++.+. +..+|||.++.. ..++|.+|+++++.++|+||+++++++.. + ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777899999999999999864 568999998743 24679999999999999999999998864 2 47
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
+++|||+++++|.+++.... ..+++..++.++.+++.||+|||+.++ +|+||||+||+++.++.++|+|||++...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i---~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRY---IHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999998653 258999999999999999999999997 99999999999999999999999999876
Q ss_pred ccCCccc--ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 637 EVGSASV--HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 637 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
....... .....++..|++||.+....++.++||||||+++|||++|..|+............. .......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~-------~~~~~~~ 232 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGI-------AQGQMIV 232 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccc-------ccccccH
Confidence 4222111 112234567999999998899999999999999999999998875432211000000 0000011
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
..+.+.+........+..++.++.+++.+||+.+|++|||+.||++.|..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 233 TRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 112222222222222334457799999999999999999999999999875
No 204
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.8e-34 Score=314.72 Aligned_cols=265 Identities=22% Similarity=0.284 Sum_probs=195.9
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-------
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG------- 554 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------- 554 (790)
.++|++.+.||+|+||.||++... +..+|+|.+.. .....+.+|+.+++.++||||+++++++...
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 478999999999999999999875 78999999853 2345688999999999999999999987532
Q ss_pred eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
..|+||||+++ +|.+.+.. .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++
T Consensus 100 ~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~i---vHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 100 DVYLVMELMDA-NLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred eeEEEEeCCCc-CHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 36999999976 67666643 37888999999999999999999998 999999999999999999999999997
Q ss_pred ccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCcccccccccccc----------ccch----
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE----------STGL---- 700 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~----------~~~~---- 700 (790)
..... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...+....- ....
T Consensus 172 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 172 TACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred ccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 54321 1223456899999999999999999999999999999999999999754321000 0000
Q ss_pred HHHHHHHHcCC-C-ChhhhhhhcCCcCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 701 VALFEEVLRQP-D-PREDLQRLVDPRLG---DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 701 ~~~~~~~~~~~-~-~~~~l~~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
........... . ....+.+....... ...+......+.+++.+||+.||++|||+.|++++-+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 250 QPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000000000 0 00001111000000 0011122456889999999999999999999998765
No 205
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6e-34 Score=310.41 Aligned_cols=250 Identities=24% Similarity=0.342 Sum_probs=193.8
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|++.+.||+|+||.||++..+ ++.+|+|.+... ....+.+|+.++..++|+||+++++++.+ ...++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47899999999999999999986 678999998642 22347889999999999999999998875 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++.... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i---iHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLHY---VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999997643 358999999999999999999999998 999999999999999999999999987543322
Q ss_pred cccccccccCCCccchhccc-----CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
........||+.|+|||++. ...++.++|||||||++|||++|+.||..... ......+......
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~-- 226 (332)
T cd05623 157 TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNHKER-- 226 (332)
T ss_pred cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH--------HHHHHHHhCCCcc--
Confidence 22223457899999999986 34688999999999999999999999964321 1222222221100
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCC--CCCCHHHHHHH
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQ--LRPSMRAIVVA 761 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~--~RPt~~evl~~ 761 (790)
. .. ..........+.+++.+|+..++. .|++++|++++
T Consensus 227 ----~---~~-p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 227 ----F---QF-PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ----c---cC-CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 00 001123455678889988855444 47899999877
No 206
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.9e-34 Score=303.49 Aligned_cols=255 Identities=26% Similarity=0.430 Sum_probs=201.0
Q ss_pred CHHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh--hHHHHHHHHHHHHhc-CCCCCcceEEEEe---
Q 046083 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--ASKEFLAELKVLTHV-HHLNLVRLIGYCV--- 552 (790)
Q Consensus 481 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~g~~~--- 552 (790)
+..++......|++.+.||+|+||.||+|... ++.+|+|.+... ...++..|+.++.++ +|+|++++++++.
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 45566666788999999999999999999985 788999988643 345688899999998 7999999999874
Q ss_pred ----cCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEE
Q 046083 553 ----EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVA 628 (790)
Q Consensus 553 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~ 628 (790)
....+++|||+.+|+|.+++.......+++..+..++.|++.||.|||++++ +|+||+|+||++++++.++|+
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i---vH~dl~~~nili~~~~~~~l~ 163 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKV---IHRDIKGQNVLLTENAEVKLV 163 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEEECCCCCEEEe
Confidence 2347999999999999999986555568899999999999999999999998 999999999999999999999
Q ss_pred EeCCCcccccCCcccccccccCCCccchhccc-----CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHH
Q 046083 629 DFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVAL 703 (790)
Q Consensus 629 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~ 703 (790)
|||++........ ......|+..|+|||.+. ...++.++|||||||++|||++|..||...... ...
T Consensus 164 dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~-------~~~ 235 (282)
T cd06636 164 DFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM-------RAL 235 (282)
T ss_pred eCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH-------hhh
Confidence 9999875532211 123356889999999875 346788999999999999999999998543211 000
Q ss_pred HHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 704 FEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 704 ~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
. ... ....+.. .....+..+.+++.+||+.||.+|||+.|++.
T Consensus 236 ~-~~~----------~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 F-LIP----------RNPPPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred h-hHh----------hCCCCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 000 0001111 11234467899999999999999999999975
No 207
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=8.2e-34 Score=323.62 Aligned_cols=267 Identities=21% Similarity=0.299 Sum_probs=195.1
Q ss_pred HHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--hhHHHHHHHHHHHHhcCCC------CCcceEEEEe
Q 046083 483 EELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFLAELKVLTHVHHL------NLVRLIGYCV 552 (790)
Q Consensus 483 ~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--~~~~~~~~E~~~l~~l~h~------niv~l~g~~~ 552 (790)
+++...+++|++.++||+|+||+||+|... ++.||||+++. ....++..|++++.+++|. +++++++++.
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 344456788999999999999999999875 77899999863 3344567788888877654 5788888876
Q ss_pred c--CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCCC------
Q 046083 553 E--GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKNF------ 623 (790)
Q Consensus 553 ~--~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~~------ 623 (790)
. +..++|||++ +++|.+++...+ .+++..+..++.|++.||.|||+ .++ +||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~gI---iHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELHL---MHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCe---ecCCCCHHHEEEecCCcccccc
Confidence 4 3578999988 678999887643 58999999999999999999998 487 9999999999998765
Q ss_pred ----------cEEEEEeCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccc
Q 046083 624 ----------RAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNET 693 (790)
Q Consensus 624 ----------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~ 693 (790)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~ 351 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL 351 (467)
T ss_pred cccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 499999998764321 223467899999999999999999999999999999999999999653321
Q ss_pred cccccchHHHHHHHHcCCCC-------hhhhhhhcCC--cCCCCC---------------CHHHHHHHHHHHHHccccCC
Q 046083 694 ITESTGLVALFEEVLRQPDP-------REDLQRLVDP--RLGDDY---------------PIDSVRKMARLARACTQENP 749 (790)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~-------~~~l~~~~d~--~l~~~~---------------~~~~~~~l~~li~~Cl~~dP 749 (790)
.........+..... ......+.+. .+.... .......+.+|+.+||+.||
T Consensus 352 -----~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 352 -----EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred -----HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 111111111111000 0000000000 000000 00113467899999999999
Q ss_pred CCCCCHHHHHHHHHh
Q 046083 750 QLRPSMRAIVVALMT 764 (790)
Q Consensus 750 ~~RPt~~evl~~L~~ 764 (790)
++|||++|++++-+.
T Consensus 427 ~~R~ta~e~L~Hp~~ 441 (467)
T PTZ00284 427 QKRLNARQMTTHPYV 441 (467)
T ss_pred hhCCCHHHHhcCccc
Confidence 999999999986654
No 208
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1e-33 Score=296.42 Aligned_cols=246 Identities=23% Similarity=0.379 Sum_probs=199.9
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~ 562 (790)
+|+..+.||+|+||.||.++.. ++.+++|.+.. ....++.+|++++++++|+||+++++++.+. ..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5888999999999998888764 78899998653 3345688999999999999999999988754 58999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++.......+++..+..++.+++.||.|||+.++ +|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGI---LHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCc---cccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 999999999986544568999999999999999999999998 9999999999999999999999999986543321
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
......+++.|+|||.+.+..++.++||||||+++|||++|..||..... ..........
T Consensus 157 ~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~------------ 216 (256)
T cd08221 157 MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP--------LNLVVKIVQG------------ 216 (256)
T ss_pred cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcC------------
Confidence 22345689999999999988899999999999999999999999854221 1111121111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
.. ...+......+.+++.+||+.+|++||+++++++++
T Consensus 217 -~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 217 -NY-TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -CC-CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 11 111123446788999999999999999999998764
No 209
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.4e-34 Score=303.73 Aligned_cols=259 Identities=24% Similarity=0.396 Sum_probs=201.5
Q ss_pred cCHHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--hhHHHHHHHHHHHHhc-CCCCCcceEEEEe--
Q 046083 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFLAELKVLTHV-HHLNLVRLIGYCV-- 552 (790)
Q Consensus 480 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~-- 552 (790)
+.++.+....++|++.+.||+|+||.||++... ++.+++|.++. ....++.+|+.+++++ +|+|++++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 87 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK 87 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence 344566667899999999999999999999885 78899998864 2335688899999999 6999999999874
Q ss_pred ----cCeEEEEEEEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEE
Q 046083 553 ----EGSLFLVYEYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAK 626 (790)
Q Consensus 553 ----~~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~k 626 (790)
+...++||||+++++|.+++... ....+++..+..++.++++||.|||++++ +||||||+||+++.++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~nili~~~~~~k 164 (286)
T cd06638 88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKT---IHRDVKGNNILLTTEGGVK 164 (286)
T ss_pred ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCc---cccCCCHHhEEECCCCCEE
Confidence 23479999999999999988642 23468899999999999999999999998 9999999999999999999
Q ss_pred EEEeCCCcccccCCcccccccccCCCccchhcccC-----CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchH
Q 046083 627 VADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY-----GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701 (790)
Q Consensus 627 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 701 (790)
|+|||+++....... ......|+..|+|||++.. ..++.++|||||||++|||++|+.|+......
T Consensus 165 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-------- 235 (286)
T cd06638 165 LVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM-------- 235 (286)
T ss_pred EccCCceeecccCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh--------
Confidence 999999886543221 1223468899999998853 45788999999999999999999998643211
Q ss_pred HHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 702 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
......... ..+.+ ..+......+.+++.+||+.+|++|||+.|+++++
T Consensus 236 ~~~~~~~~~----------~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 236 RALFKIPRN----------PPPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred HHHhhcccc----------CCCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 000000000 00000 01112234688999999999999999999999865
No 210
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.8e-34 Score=312.14 Aligned_cols=235 Identities=26% Similarity=0.422 Sum_probs=185.0
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHH-HHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELK-VLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~-~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||++... ++.+|+|.+.... ...+..|.. +++.++|+||+++++++.+ +..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999886 6789999986422 223444443 5678899999999998764 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++.... .+.+.....++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~gi---iHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~~ 154 (325)
T cd05602 81 GELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNI---VYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTS 154 (325)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCcc
Confidence 99999997643 47788888999999999999999998 999999999999999999999999997532211 1223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|..||..... ........... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~-------------~ 213 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--------AEMYDNILNKP-------------L 213 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH--------HHHHHHHHhCC-------------c
Confidence 45789999999999999999999999999999999999999964322 11222222111 0
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 759 (790)
..+......+.+++.+|++.+|.+||++.+.+
T Consensus 214 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 214 --QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred --CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence 11223445788999999999999999977543
No 211
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.2e-34 Score=302.55 Aligned_cols=244 Identities=24% Similarity=0.395 Sum_probs=196.5
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
.|+..+.||+|+||.||+|.+. +..+|+|.++. ...+.+.+|++++++++||||+++++++.. ...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3666788999999999999875 77899998763 234568899999999999999999998875 4589999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++.. ..+++..+..++.++++|+.|||++++ +|+||+|+||++++++.++|+|||++........ .
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~i---vH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-~ 157 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-K 157 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCe---eccCCChheEEEeCCCCEEEccccccccccCcch-h
Confidence 99999999864 358999999999999999999999997 9999999999999999999999999976543221 1
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
.....++..|+|||.+.+..++.++||||||+++|||++|+.|+...... ..... .. .
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~~-~~-------------~ 215 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM--------RVLFL-IP-------------K 215 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh--------hHHhh-hh-------------c
Confidence 22345788999999999889999999999999999999999997543211 00000 00 0
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
......+...+..+.+++.+||+.+|++||++.+++++-.
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 216 NSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence 0011122234567889999999999999999999998644
No 212
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3e-34 Score=311.31 Aligned_cols=232 Identities=25% Similarity=0.413 Sum_probs=184.0
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHH-HHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELK-VLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~-~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|+.. ++.+|+|.+.... ...+..|.. +++.++||||+++++++.+ +..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999985 7889999986422 233555554 5788899999999998764 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|..++... ..+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~i---vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~ 154 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNI---IYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EETTS 154 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCCHHHeEECCCCCEEEccCCCCccCCCC-CCccc
Confidence 9999988754 358888899999999999999999998 99999999999999999999999998753221 11223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||.+.+..++.++|||||||++|||++|..||.... .......+... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~-------------~- 212 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD--------VSQMYDNILHK-------------P- 212 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC--------HHHHHHHHhcC-------------C-
Confidence 4578999999999998899999999999999999999999986432 11222222211 1
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMR 756 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 756 (790)
...+......+.+++.+||+.+|.+||+..
T Consensus 213 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 213 -LQLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred -CCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 112333456788999999999999999753
No 213
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8.3e-34 Score=312.34 Aligned_cols=261 Identities=23% Similarity=0.315 Sum_probs=196.0
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-------
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE------- 553 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------- 553 (790)
..++|++.+.||+|+||.||++... ++.+|+|++.. ...+.+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 3468999999999999999999875 78999999863 234567889999999999999999998752
Q ss_pred CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 554 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
...++||||+++ +|.+.+.. .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~gi---vHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCChHHEEECCCCCEEEeeCccc
Confidence 236999999976 67776653 47889999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
+..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||....... ........ +..+..
T Consensus 167 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~~-~~~~~~ 239 (355)
T cd07874 167 RTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID----QWNKVIEQ-LGTPCP 239 (355)
T ss_pred ccCCCc--cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH----HHHHHHHH-hCCCCH
Confidence 865322 12234568999999999999899999999999999999999999986533110 00000000 000000
Q ss_pred ------hhhhhhhcC----------C-----cC---CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 714 ------REDLQRLVD----------P-----RL---GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 714 ------~~~l~~~~d----------~-----~l---~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
......+++ + .+ ....+......+.+++.+||+.||++|||+.|++++-+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~ 313 (355)
T cd07874 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313 (355)
T ss_pred HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcc
Confidence 000000000 0 00 00111223457889999999999999999999998744
No 214
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-36 Score=288.76 Aligned_cols=249 Identities=22% Similarity=0.363 Sum_probs=201.0
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeC-----hhhHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVY 560 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~ 560 (790)
++.|++-+.||+|.|+.||+.... |+.+|+|.++ ....+++.+|++|.+.++||||+++..... ++..|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 456788899999999999998765 7888877664 456688999999999999999999998665 55689999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC---CCcEEEEEeCCCcccc
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKLTE 637 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~---~~~~kl~DfGla~~~~ 637 (790)
|+|+|++|..-+-.. ...++..+-+.++||+++|.|+|.++| ||||+||+|+||.. .--+||+|||+|..+.
T Consensus 90 e~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~I---vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGI---VHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred ecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCc---eeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999998766543 347788889999999999999999998 99999999999943 3458999999999876
Q ss_pred cCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 638 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
.........|||+|||||++....++..+|||+.||+||-|+.|.+||.... ...+++.++.....
T Consensus 165 --~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--------~~rlye~I~~g~yd---- 230 (355)
T KOG0033|consen 165 --DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--------QHRLYEQIKAGAYD---- 230 (355)
T ss_pred --CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--------HHHHHHHHhccccC----
Confidence 3333455789999999999999999999999999999999999999997532 23445555443211
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+++ ..=....++..+|+++||..||.+|.|+.|.+.+-|
T Consensus 231 ---~~~----~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 231 ---YPS----PEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred ---CCC----cccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 011 001134456789999999999999999999876554
No 215
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.5e-34 Score=316.99 Aligned_cols=247 Identities=23% Similarity=0.362 Sum_probs=192.6
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|+..+.||+|+||.||++... ++.+|+|.++.. ....+.+|+.++.+++|+||+++++.+.+ +..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999885 789999998642 23457889999999999999999998875 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||++.......
T Consensus 81 E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~gi---vHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLGF---IHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 9999999999997643 58999999999999999999999998 999999999999999999999999987542110
Q ss_pred c----------------------------------ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCcc
Q 046083 641 A----------------------------------SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEA 686 (790)
Q Consensus 641 ~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p 686 (790)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0 001134689999999999999999999999999999999999999
Q ss_pred ccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 046083 687 VVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS---MRAIVVA 761 (790)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt---~~evl~~ 761 (790)
|..... ......+..... ... .... .....++.+++.+|+. +|.+|++ ++|++++
T Consensus 236 f~~~~~--------~~~~~~i~~~~~------~~~---~p~~--~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 236 FCSETP--------QETYRKVMNWKE------TLV---FPPE--VPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCH--------HHHHHHHHcCCC------cee---cCCC--CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 965332 111222221100 000 0000 1133467778888764 9999985 6777665
No 216
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1e-33 Score=296.33 Aligned_cols=245 Identities=26% Similarity=0.438 Sum_probs=199.9
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|++.+.||+|+||.+|++... ++.+++|.+.. ...+++.+|++++++++|+||+++++++.+ +..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5888999999999999999875 78899998753 234578999999999999999999998875 468999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++.......+++..+++++.+++.||.|||++++ +|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKI---LHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 999999999986544568999999999999999999999997 9999999999999999999999999986543221
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
......|++.|+|||++.+..++.++|+||||++++||++|..||..... ...........
T Consensus 157 ~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~--------~~~~~~~~~~~----------- 217 (256)
T cd08218 157 LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM--------KNLVLKIIRGS----------- 217 (256)
T ss_pred hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH--------HHHHHHHhcCC-----------
Confidence 12234578899999999988999999999999999999999999854221 11122221110
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....+......+.+++.+||+.+|.+||++++|+++
T Consensus 218 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 218 ---YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ---CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 011233445678999999999999999999999874
No 217
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.6e-34 Score=300.68 Aligned_cols=243 Identities=28% Similarity=0.470 Sum_probs=191.9
Q ss_pred eeeeecCceEEEEEEECC--------ceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 496 NKIGQGGFGAVFYAELRG--------EKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~g--------~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+.||+|+||.||+|.... ..+++|.+.. ....++.+|+++++.++||||+++++++.. ...+++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998752 5689988753 235678899999999999999999998875 458999999
Q ss_pred ecCCChhhhhhcCC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC-----cEEEEEeCC
Q 046083 563 IENGNLNQHLRGSG-----KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-----RAKVADFGL 632 (790)
Q Consensus 563 ~~~g~L~~~l~~~~-----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~-----~~kl~DfGl 632 (790)
+++++|.+++.... ...+++..++.++.+++.||.|||+.++ +|+||||+||+++.+. .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHF---IHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCc---ccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 2348899999999999999999999997 9999999999999877 899999999
Q ss_pred CcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcC
Q 046083 633 AKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQ 710 (790)
Q Consensus 633 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 710 (790)
++........ ......++..|+|||++.++.++.++||||||+++|||++ |+.||..... .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--------~~~~~~~~~- 228 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--------QEVLQHVTA- 228 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--------HHHHHHHhc-
Confidence 9755322111 1122345678999999999999999999999999999998 9988853221 011111100
Q ss_pred CCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 711 PDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 711 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
......+...+..+.+++.+||+.+|.+||++++|++.|.
T Consensus 229 -------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 229 -------------GGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -------------CCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0011122345567899999999999999999999999886
No 218
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.6e-35 Score=285.51 Aligned_cols=248 Identities=25% Similarity=0.413 Sum_probs=201.8
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----------hhHHHHHHHHHHHHhc-CCCCCcceEEEEecC
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----------QASKEFLAELKVLTHV-HHLNLVRLIGYCVEG 554 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----------~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~ 554 (790)
-+.|...+.||+|..++|-+...+ +..+|+|++.. +-.+.-.+|+.||+++ .||+|+++.+++...
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 356777889999999999988776 78899998742 1224567899999999 699999999998755
Q ss_pred e-EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 555 S-LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 555 ~-~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
. .++|+|.|+.|.|.++|...- .++++...+|++|+.+|+.|||.+++ |||||||+|||+|++.++||+|||++
T Consensus 96 sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~I---VHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNI---VHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhh---hhcccChhheeeccccceEEecccee
Confidence 4 799999999999999998743 69999999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCcccccccccCCCccchhcccC------CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHH
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQY------GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEV 707 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 707 (790)
..+..+ ......+|||+|+|||.+.. ..|+...|+|+.||+||-|+.|.+||..... ......+
T Consensus 171 ~~l~~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ--------mlMLR~I 240 (411)
T KOG0599|consen 171 CQLEPG--EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ--------MLMLRMI 240 (411)
T ss_pred eccCCc--hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH--------HHHHHHH
Confidence 977644 34556899999999998853 3688899999999999999999999965422 1122223
Q ss_pred HcCCCChhhhhhhcCCcCCCCCC--HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 708 LRQPDPREDLQRLVDPRLGDDYP--IDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 708 ~~~~~~~~~l~~~~d~~l~~~~~--~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
+... .+-..| .+......+|+.+||+.||.+|.|.+|++++-..
T Consensus 241 meGk-------------yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 241 MEGK-------------YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred Hhcc-------------cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 2221 111111 2445678899999999999999999999986554
No 219
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.1e-33 Score=297.82 Aligned_cols=245 Identities=21% Similarity=0.418 Sum_probs=195.2
Q ss_pred CcccceeeeecCceEEEEEEEC-CceEEEEEeChh---------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ---------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLV 559 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv 559 (790)
+|+..+.||+|+||.||+|... ++.+|+|.++.. ..+.+.+|++++++++|+||+++++++.+. ..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999875 788999987531 224588899999999999999999998754 58999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+++++|.+++.... .+++..+..++.+++.||+|||+.++ +|+||+|+||++++++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCV---VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999997643 58899999999999999999999997 99999999999999999999999998754221
Q ss_pred C-----cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 640 S-----ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 640 ~-----~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
. ........++..|+|||++.+..++.++||||||+++|||++|..||...... ..........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~--- 224 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL--------AAMFYIGAHR--- 224 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH--------HHHHHhhhcc---
Confidence 1 11112346889999999999888999999999999999999999998643211 0000000000
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
...+ ..+......+.+++.+||+.+|.+||++.|+++
T Consensus 225 -----~~~~----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 -----GLMP----RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -----CCCC----CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0011 122234567889999999999999999999875
No 220
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.2e-33 Score=297.70 Aligned_cols=244 Identities=24% Similarity=0.432 Sum_probs=195.9
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh------------hHHHHHHHHHHHHhcCCCCCcceEEEEec-Ce
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GS 555 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~ 555 (790)
+|.+...||+|+||.||+|... +..+++|.+... ..+.+.+|+.++++++||||+++++++.+ ..
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4677899999999999999875 788999987521 12468899999999999999999998875 45
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
.+++|||+++++|.+++...+ .+++..+..++.+++.||+|||+.++ +||||+|+||++++++.++|+|||+++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~i---vH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNRGI---IHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcCc---ccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 899999999999999997643 58899999999999999999999998 9999999999999999999999999986
Q ss_pred cccCCcc-----cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcC
Q 046083 636 TEVGSAS-----VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQ 710 (790)
Q Consensus 636 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 710 (790)
....... ......|+..|+|||.+.+..++.++|+||||+++|||++|+.||...... .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~-- 225 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--------QAIFKIG-- 225 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH--------HHHHHHh--
Confidence 6421111 112245788999999999889999999999999999999999998643210 0011110
Q ss_pred CCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 711 PDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 711 ~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.... ...+...+..+.+++.+||+.+|.+||++.|++++
T Consensus 226 --------~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 226 --------ENAS----PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred --------ccCC----CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 1111 12233445678899999999999999999999863
No 221
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.7e-34 Score=311.09 Aligned_cols=250 Identities=23% Similarity=0.334 Sum_probs=194.1
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|.+.+.||+|+||.||+++.. ++.+|+|.+... ....+.+|..++..++|+||+++++++.+ +..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57899999999999999999886 678999998642 22447889999999999999999998875 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++|+|.+++.... ..+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~i---iHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLHY---VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999998643 358899999999999999999999998 999999999999999999999999998654332
Q ss_pred cccccccccCCCccchhcccC-----CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQY-----GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
........|++.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+......
T Consensus 157 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~--------~~~~~~i~~~~~~-- 226 (331)
T cd05624 157 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL--------VETYGKIMNHEER-- 226 (331)
T ss_pred ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH--------HHHHHHHHcCCCc--
Confidence 222233568999999999875 4678899999999999999999999864321 1122222211100
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQL--RPSMRAIVVA 761 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~--RPt~~evl~~ 761 (790)
+ .+. ....+.+.++.+++.+|+..++++ |+++++++.+
T Consensus 227 -~------~~p-~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 227 -F------QFP-SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred -c------cCC-CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0 000 001123467888999998866544 5688888765
No 222
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.1e-33 Score=305.26 Aligned_cols=264 Identities=25% Similarity=0.384 Sum_probs=197.5
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
++|.+.++||+|+||.||+|... ++.+|+|.++.. ....+.+|++++++++||||+++++++.. +..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56889999999999999999875 778999988632 23457789999999999999999998874 568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++ +|.+++...+ ..+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i---vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 159 (309)
T cd07872 86 LDK-DLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRKV---LHRDLKPQNLLINERGELKLADFGLARAKSVPTK- 159 (309)
T ss_pred CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEECCCCCEEECccccceecCCCcc-
Confidence 986 8888887643 358899999999999999999999998 9999999999999999999999999975432221
Q ss_pred cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh-------
Q 046083 643 VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR------- 714 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 714 (790)
......+++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... +........+..+...
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-----DELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCCHHHHhhhcc
Confidence 1223457899999998865 46899999999999999999999999654321 1111111111111100
Q ss_pred -hhhhhhcCCcCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 715 -EDLQRLVDPRLGD----DYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 715 -~~l~~~~d~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
......-.+.... .........+.+++.+||+.||.+|||++|++++-+-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 289 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF 289 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhh
Confidence 0000000011000 0011234567899999999999999999999885543
No 223
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.5e-33 Score=311.30 Aligned_cols=257 Identities=23% Similarity=0.311 Sum_probs=195.9
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-------C
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-------G 554 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-------~ 554 (790)
.++|.+.+.||+|+||.||++... ++.+|||++.. ...+.+.+|+.+++.++||||+++++++.. .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 468999999999999999999875 78899999863 234568889999999999999999987642 2
Q ss_pred eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
..|+||||+++ +|.+++.. .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~i---vH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCe---ecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 36999999975 77777753 47889999999999999999999998 999999999999999999999999998
Q ss_pred ccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcC---C
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQ---P 711 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~---~ 711 (790)
..... .......++..|+|||++.+..++.++|||||||++|||++|+.||...... ..+..++.. +
T Consensus 175 ~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~--------~~~~~~~~~~~~~ 244 (364)
T cd07875 175 TAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--------DQWNKVIEQLGTP 244 (364)
T ss_pred ccCCC--CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHhcCCC
Confidence 65322 1223456899999999999999999999999999999999999999654321 111111110 0
Q ss_pred CC---------------------hhhhhhhcCCcC---CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 712 DP---------------------REDLQRLVDPRL---GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 712 ~~---------------------~~~l~~~~d~~l---~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.+ ......+....+ ...........+.+++.+|++.||.+|||++|++++-+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~ 320 (364)
T cd07875 245 CPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320 (364)
T ss_pred CHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcc
Confidence 00 000000000000 00011112356789999999999999999999998644
No 224
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-36 Score=295.62 Aligned_cols=243 Identities=24% Similarity=0.428 Sum_probs=203.2
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeCh-hhHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEEecCCC
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-QASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGN 567 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~~~~g~ 567 (790)
|.++++||+|+||.||+|..+ |..+|||.+.. .+.+++..|+.+|++.+.|++|+.||.+. ..++|+|||||.-|+
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGS 114 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGS 114 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCc
Confidence 677899999999999999876 89999999975 45688999999999999999999999555 667999999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccccc
Q 046083 568 LNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL 647 (790)
Q Consensus 568 L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 647 (790)
..+.++.+. .++++.++..+++..++||+|||.... +|||||+.||||+-+|.+||+|||.|-.+...- .....+
T Consensus 115 iSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~K---IHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM-AKRNTV 189 (502)
T KOG0574|consen 115 ISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLKK---IHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM-AKRNTV 189 (502)
T ss_pred HHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHHH---HHhhcccccEEEcccchhhhhhccccchhhhhH-HhhCcc
Confidence 999998765 479999999999999999999999988 999999999999999999999999997553211 123457
Q ss_pred ccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCC
Q 046083 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGD 727 (790)
Q Consensus 648 ~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~ 727 (790)
.||+.|||||+++.-.|..++||||+|+...||.-|++|+....+. +.++ ++...-..
T Consensus 190 IGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM-----------RAIF-----------MIPT~PPP 247 (502)
T KOG0574|consen 190 IGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM-----------RAIF-----------MIPTKPPP 247 (502)
T ss_pred ccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc-----------ceeE-----------eccCCCCC
Confidence 8999999999999999999999999999999999999998764431 0000 01111111
Q ss_pred --CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 728 --DYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 728 --~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..|+.-..++-+++++||-..|++|-|+.+++++
T Consensus 248 TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 248 TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 1244456789999999999999999998887664
No 225
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.7e-33 Score=304.81 Aligned_cols=193 Identities=27% Similarity=0.443 Sum_probs=159.3
Q ss_pred ceeeeecCceEEEEEEEC----CceEEEEEeChhh-HHHHHHHHHHHHhcCCCCCcceEEEEec---CeEEEEEEEecCC
Q 046083 495 GNKIGQGGFGAVFYAELR----GEKAAIKKMDMQA-SKEFLAELKVLTHVHHLNLVRLIGYCVE---GSLFLVYEYIENG 566 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~----g~~vavK~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~lv~e~~~~g 566 (790)
.++||+|+||.||+|... +..+|+|.+.... ...+.+|++++++++||||+++++++.. ...+++|||+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~- 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH- 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-
Confidence 568999999999999864 4679999987533 4567889999999999999999998753 347899999865
Q ss_pred ChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEe----cCCCcEEEEEeCCCcc
Q 046083 567 NLNQHLRGS-------GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILI----DKNFRAKVADFGLAKL 635 (790)
Q Consensus 567 ~L~~~l~~~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl----~~~~~~kl~DfGla~~ 635 (790)
+|.+++... ....+++..+..++.|++.||.|||++++ +||||||+|||+ +.++.+||+|||+++.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i---vHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWV---LHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCE---EcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence 888877532 12358899999999999999999999997 999999999999 4567899999999987
Q ss_pred cccCCcc--cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccc
Q 046083 636 TEVGSAS--VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTN 691 (790)
Q Consensus 636 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~ 691 (790)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|++||....
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 6432221 1234578999999999876 458999999999999999999999996543
No 226
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.4e-33 Score=294.43 Aligned_cols=242 Identities=30% Similarity=0.509 Sum_probs=193.2
Q ss_pred eeeeecCceEEEEEEEC-CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecCCChh
Q 046083 496 NKIGQGGFGAVFYAELR-GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLN 569 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~g~L~ 569 (790)
++||+|+||.||++... ++.+++|.+... ..+.+.+|++++++++|+||+++++++.+. ..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 47999999999999886 889999987642 345789999999999999999999988754 589999999999999
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc-cccc
Q 046083 570 QHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH-TRLV 648 (790)
Q Consensus 570 ~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~-~~~~ 648 (790)
+++.... ..+++..++.++.+++.||.|||++++ +||||+|+|||++.++.+||+|||++........... ....
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~i---~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKNC---IHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCE---ehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 9997643 358899999999999999999999997 9999999999999999999999999986542211111 1123
Q ss_pred cCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCC
Q 046083 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGD 727 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~ 727 (790)
++..|+|||.+.++.++.++|+||||+++|||++ |..||...... ..... .. .....
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--------~~~~~-~~-------------~~~~~ 214 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--------QTRER-IE-------------SGYRM 214 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--------HHHHH-Hh-------------cCCCC
Confidence 3567999999998899999999999999999999 77777443211 11111 11 11111
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 728 DYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 728 ~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..+...+..+.+++.+||+.+|.+|||+.|+++.|.
T Consensus 215 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 215 PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 123344567999999999999999999999999875
No 227
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.7e-34 Score=299.29 Aligned_cols=248 Identities=29% Similarity=0.546 Sum_probs=195.5
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChhhH-----HHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS-----KEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~-----~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~~ 563 (790)
|++.+.||+|+||+||++... ++.+|+|.+..... ....+|+.++++++||||+++++++. +...+++|||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 577899999999999999997 56799999975432 22355999999999999999999987 45689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++... ..+++..+..++.++++||.+||++++ +|+||||+||++++++.++|+|||.+.... .....
T Consensus 81 ~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i---~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGI---VHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNEN 154 (260)
T ss_dssp TTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTE---EESSBSGGGEEESTTSEEEESSGTTTEEST-STTSE
T ss_pred cccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccc-ccccc
Confidence 999999999832 358999999999999999999999997 999999999999999999999999997541 12223
Q ss_pred ccccccCCCccchhccc-CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 644 HTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~-~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
.....++..|+|||.+. +..++.++||||+|+++|+|++|..||..... .+............ .....
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~-----~~~~~~~~~~~~~~-----~~~~~- 223 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS-----DDQLEIIEKILKRP-----LPSSS- 223 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH-----HHHHHHHHHHHHTH-----HHHHT-
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-----hhhhhhhhhccccc-----ccccc-
Confidence 34467899999999998 88899999999999999999999999875411 11111111111100 00000
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.........+.+++.+||+.||++||++.+++++
T Consensus 224 -----~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 224 -----QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp -----TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred -----cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000112689999999999999999999999864
No 228
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.9e-34 Score=311.99 Aligned_cols=233 Identities=26% Similarity=0.421 Sum_probs=185.0
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHH-HHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELK-VLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~-~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|... ++.+|+|.+... ...++..|.. +++.++||||+++++++.. +..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999875 789999998643 2234555554 4677899999999988764 568999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|..++.... .+++..+..++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..... .....
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~gi---vH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~ 154 (325)
T cd05604 81 GELFFHLQRER--SFPEPRARFYAAEIASALGYLHSINI---VYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTT 154 (325)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCcc
Confidence 99999887643 58999999999999999999999998 99999999999999999999999998753221 11223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|..||..... ...+....... +
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--------~~~~~~~~~~~-------------~ 213 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV--------AEMYDNILHKP-------------L 213 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH--------HHHHHHHHcCC-------------c
Confidence 45789999999999999999999999999999999999999864321 12222222211 0
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRA 757 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 757 (790)
..+......+.+++.+|++.+|.+||++++
T Consensus 214 --~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 214 --VLRPGASLTAWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred --cCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence 111223456789999999999999998864
No 229
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.3e-33 Score=295.99 Aligned_cols=234 Identities=24% Similarity=0.443 Sum_probs=187.0
Q ss_pred eeeeecCceEEEEEEECCc------------eEEEEEeChhh--HHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEE
Q 046083 496 NKIGQGGFGAVFYAELRGE------------KAAIKKMDMQA--SKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYE 561 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~g~------------~vavK~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e 561 (790)
+.||+|+||.||+|.+... .+++|.+.... ...+.+|+.++++++|||++++++++.....++|||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e 80 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEE 80 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEE
Confidence 4689999999999998632 47888776433 567899999999999999999999887766899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC-------cEEEEEeCCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-------RAKVADFGLAK 634 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~-------~~kl~DfGla~ 634 (790)
|+++|+|.+++..... .+++..+..++.|++.||+|||++++ +||||||+|||++.++ .+||+|||++.
T Consensus 81 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~ 156 (259)
T cd05037 81 YVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKL---VHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPI 156 (259)
T ss_pred cCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCe---ecccCccceEEEecCccccCCceeEEeCCCCccc
Confidence 9999999999986542 68999999999999999999999998 9999999999999887 79999999998
Q ss_pred ccccCCcccccccccCCCccchhcccCC--CCCchhhHHHHHHHHHHHHhC-CccccccccccccccchHHHHHHHHcCC
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELISA-MEAVVKTNETITESTGLVALFEEVLRQP 711 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDvwS~Gvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (790)
.... .....++..|+|||++... .++.++||||||+++|||++| ..|+...... .. .......
T Consensus 157 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~-----~~----~~~~~~~ 222 (259)
T cd05037 157 TVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS-----EK----ERFYQDQ 222 (259)
T ss_pred cccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch-----hH----HHHHhcC
Confidence 6532 1223467789999999876 789999999999999999994 6666443211 00 0011000
Q ss_pred CChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 712 DPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 712 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
. ..+......+.+++.+||+.+|.+|||+.+|++.|
T Consensus 223 ------------~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 223 ------------H---RLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred ------------C---CCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0 00111126788999999999999999999999876
No 230
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-33 Score=315.10 Aligned_cols=264 Identities=20% Similarity=0.275 Sum_probs=197.6
Q ss_pred hcCcccceeeeecCceEEEEEEEC----CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR----GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~----g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
..+|.+.+.||+|+||.||++... +..+++|.+... +.+.+|++++++++||||+++++++.. ...+++||++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 168 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKY 168 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhc
Confidence 357999999999999999999764 467899988643 345689999999999999999998764 5689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc-
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS- 642 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~- 642 (790)
. ++|.+++... ..+++..++.++.|++.||.|||++++ +||||||+|||++.++.++|+|||+++........
T Consensus 169 ~-~~l~~~l~~~--~~l~~~~~~~i~~ql~~aL~~LH~~gi---vHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 169 K-CDLFTYVDRS--GPLPLEQAITIQRRLLEALAYLHGRGI---IHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred C-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence 6 5888888543 469999999999999999999999998 99999999999999999999999999765433221
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC------Chh-
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD------PRE- 715 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~- 715 (790)
......||+.|+|||++....++.++|||||||++|||++|+.||....... ....+..... .+.... ...
T Consensus 243 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~l~~i~~-~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 243 QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKS-SSSQLRSIIR-CMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCC-cHHHHHHHHH-HhccCccccCCccchh
Confidence 2234578999999999999999999999999999999999999986543221 0011111111 111000 000
Q ss_pred ---hhhhhcCCcCCCCCC-------HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 716 ---DLQRLVDPRLGDDYP-------IDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 716 ---~l~~~~d~~l~~~~~-------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.+.... ......+. .....++.+++.+||+.||++|||+.|++.+-.
T Consensus 321 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~ 377 (392)
T PHA03207 321 LCKHFKQYA-IVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPL 377 (392)
T ss_pred HHHHHHhhc-ccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCch
Confidence 000000 00111110 112356788999999999999999999998654
No 231
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=8.2e-34 Score=299.70 Aligned_cols=247 Identities=24% Similarity=0.412 Sum_probs=186.6
Q ss_pred eeeeecCceEEEEEEEC----CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecCC
Q 046083 496 NKIGQGGFGAVFYAELR----GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~----g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~g 566 (790)
+.||+|+||.||+|... +..+++|.++.. ....+.+|+.++++++||||+++++++.+. ..++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 36899999999999864 346899988642 234688899999999999999999988754 489999999999
Q ss_pred ChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 567 NLNQHLRGSG---KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 567 ~L~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
+|.++++... ...+++..+.+++.|++.||+|||+.++ +|+||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNF---IHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCE---eccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 9999997532 2346788888999999999999999997 999999999999999999999999997543222111
Q ss_pred -ccccccCCCccchhcccCC-------CCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 644 -HTRLVGTFGYMPPEYAQYG-------EVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 644 -~~~~~gt~~y~aPE~~~~~-------~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
.....++..|+|||++... .++.++|+||||+++|||++ |..||...... .........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--------~~~~~~~~~---- 225 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE--------QVLTYTVRE---- 225 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH--------HHHHHHhhc----
Confidence 1234567889999998642 35789999999999999996 99998543221 000111110
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
......++.+. ......+.+++..|+ .+|++|||++||+..|+
T Consensus 226 -~~~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 226 -QQLKLPKPRLK----LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred -ccCCCCCCccC----CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 00111122221 123346788999999 58999999999998774
No 232
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.3e-33 Score=295.36 Aligned_cols=246 Identities=30% Similarity=0.544 Sum_probs=197.5
Q ss_pred cccceeeeecCceEEEEEEECC------ceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELRG------EKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~g------~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
|++.+.||.|+||.||++.... ..+|+|.+... ..+.+..|++++.+++|+|++++++++.+ +..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 4567899999999999999863 77999998743 35678999999999999999999998875 5689999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++++|.+++.......+++..+..++.|++.||+|||+.++ +|+||+|+||++++++.++|+|||++.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~---~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNF---IHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCe---eecccccceEEEccCCeEEEcccCCceeccccc
Confidence 99999999999986543338999999999999999999999998 999999999999999999999999998664332
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
........++..|+|||.+....++.++||||||++++||++ |..||..... ...........
T Consensus 158 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--------~~~~~~~~~~~-------- 221 (258)
T smart00219 158 YYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--------EEVLEYLKKGY-------- 221 (258)
T ss_pred ccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHhcCC--------
Confidence 221112336789999999988889999999999999999998 7777654211 11112211111
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
....+...+.++.+++.+|+..+|++|||+.|+++.|
T Consensus 222 ------~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 ------RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ------CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 1111223456789999999999999999999998764
No 233
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2e-33 Score=295.99 Aligned_cols=245 Identities=22% Similarity=0.369 Sum_probs=195.6
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--------hhHHHHHHHHHHHHhcCCCCCcceEEEEecC---eE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--------QASKEFLAELKVLTHVHHLNLVRLIGYCVEG---SL 556 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~---~~ 556 (790)
++|++.+.||+|+||.||+|... +..+++|.+.. ...+.+.+|++++++++||||+++++++.+. ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57889999999999999999875 78899998742 2235688899999999999999999987642 47
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
+++|||+++++|.+++.... .+++...++++.+++.||+|||+.++ +|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i---~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMI---VHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 89999999999999987643 47888999999999999999999997 99999999999999999999999999855
Q ss_pred ccCCc--ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 637 EVGSA--SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 637 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||...... . .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~-~~~~~~~----- 223 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-------A-AIFKIAT----- 223 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-------H-HHHHHhc-----
Confidence 32111 1122345788999999999888999999999999999999999998543210 0 1111111
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.......+......+.+++.+|+. +|++||+++||+++
T Consensus 224 --------~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 224 --------QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred --------CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 111122344555678889999995 99999999999864
No 234
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.2e-33 Score=297.76 Aligned_cols=244 Identities=25% Similarity=0.416 Sum_probs=198.6
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEe
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYI 563 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~ 563 (790)
.|+..+.||.|+||.||+|... +..+|+|.++. ...+.+.+|+.++++++|+|++++++++.++ ..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4667889999999999999875 78899998763 2345688999999999999999999988754 589999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++... .+++.....++.+++.||+|||+.++ +|+||+|+||+++.++.++|+|||++........ .
T Consensus 85 ~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~i---vH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-~ 157 (277)
T cd06640 85 GGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-K 157 (277)
T ss_pred CCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCc---cCcCCChhhEEEcCCCCEEEcccccceeccCCcc-c
Confidence 999999998753 48899999999999999999999998 9999999999999999999999999976543221 1
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
.....++..|+|||++.+..++.++|+||||+++|||++|..||...... .... .+..
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--------~~~~--------------~~~~ 215 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM--------RVLF--------------LIPK 215 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH--------hHhh--------------hhhc
Confidence 22345788999999999889999999999999999999999998543211 0000 0011
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
......+...+..+.+++.+||+.+|++||++++++.+-.
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 216 NNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred CCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 1112233456678899999999999999999999987644
No 235
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.8e-33 Score=304.43 Aligned_cols=248 Identities=25% Similarity=0.367 Sum_probs=198.2
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++|+..+.||+|+||.||++... ++.+|+|.+... ..+.+..|++++..++|+||+++++++.++ ..+++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 46889999999999999999885 789999988642 335688999999999999999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+.+++|.+++.......+++..+..++.|++.||+|||+.++ +|+||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGI---VYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCe---eccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 99999999999986544578999999999999999999999997 999999999999999999999999987543221
Q ss_pred cc----------------------------cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCcccccccc
Q 046083 641 AS----------------------------VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692 (790)
Q Consensus 641 ~~----------------------------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~ 692 (790)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|..||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10 01124678899999999988999999999999999999999999864332
Q ss_pred ccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC----HHHHHHH
Q 046083 693 TITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS----MRAIVVA 761 (790)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt----~~evl~~ 761 (790)
. ..+..... ...........+..+.+++.+||+.+|++||| ++|++.+
T Consensus 238 ~--------~~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 238 D--------ETFSNILK-------------KEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred H--------HHHHHHhc-------------CCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 1 11111111 11111111124578999999999999999999 6666553
No 236
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.3e-33 Score=301.72 Aligned_cols=258 Identities=26% Similarity=0.419 Sum_probs=202.5
Q ss_pred cCHHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh--hHHHHHHHHHHHHhc-CCCCCcceEEEEec-
Q 046083 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--ASKEFLAELKVLTHV-HHLNLVRLIGYCVE- 553 (790)
Q Consensus 480 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~g~~~~- 553 (790)
+..+++..++++|++.+.||+|+||.||++... ++.+|+|.+... ..+++.+|+.++.++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 455666677899999999999999999999885 788999998642 345678899999999 89999999998763
Q ss_pred -----CeEEEEEEEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEE
Q 046083 554 -----GSLFLVYEYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAK 626 (790)
Q Consensus 554 -----~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~k 626 (790)
+..++||||+++++|.++++.. ....+++..++.++.+++.||+|||+.++ +|+||||+||+++.++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i---vH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRI---IHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHEEEcCCCCEE
Confidence 2479999999999999988642 23468999999999999999999999997 9999999999999999999
Q ss_pred EEEeCCCcccccCCcccccccccCCCccchhcccCC-----CCCchhhHHHHHHHHHHHHhCCccccccccccccccchH
Q 046083 627 VADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG-----EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701 (790)
Q Consensus 627 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 701 (790)
|+|||++........ ......|+..|+|||.+... .++.++|||||||++|||++|+.||...... .
T Consensus 169 l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-------~ 240 (291)
T cd06639 169 LVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-------K 240 (291)
T ss_pred Eeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-------H
Confidence 999999886542221 11234678899999998643 3688999999999999999999998643211 0
Q ss_pred HHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 702 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
. ...+..... +.+ ..+......+.+++.+||+.+|++||++.|++++
T Consensus 241 ~-~~~~~~~~~----------~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 241 T-LFKIPRNPP----------PTL--LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred H-HHHHhcCCC----------CCC--CcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 0 111111100 011 1122334568999999999999999999999874
No 237
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.2e-33 Score=300.75 Aligned_cols=262 Identities=23% Similarity=0.332 Sum_probs=195.0
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|++.+.||+|++|.||+|... +..+|+|.++.. ..+.+.+|+.++++++|||++++++++.+ ...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 5788999999999999999875 789999988632 23568899999999999999999998875 568999999
Q ss_pred ecCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 563 IENGNLNQHLRGSG-KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
++ ++|.+++.... ...+++..+..++.|++.||+|||++++ +|+||+|+|||++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRV---LHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCe---eecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 58988887543 2568999999999999999999999998 999999999999999999999999997553222
Q ss_pred ccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHH-------cCCCC
Q 046083 642 SVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVL-------RQPDP 713 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 713 (790)
.......+++.|+|||.+.+. .++.++||||||+++|||++|+.||....... ........+. .....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID----QLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHHhCCCChhhhhcchh
Confidence 112234568899999988654 57899999999999999999999986533210 0111111000 00000
Q ss_pred hhhhhhhcCCcCCC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 714 REDLQRLVDPRLGD---DYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 714 ~~~l~~~~d~~l~~---~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
........+..... ........++.+++.+||+.||++|||+++|+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00111111100000 0011234677899999999999999999999864
No 238
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-33 Score=300.94 Aligned_cols=255 Identities=25% Similarity=0.441 Sum_probs=200.7
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
++|++.+.||+|+||.||++... +..+|+|.+.. ...+.+.+|+++++.++||||+++++++.. ...++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56888999999999999999886 78899998753 234678899999999999999999998875 568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
+++++|.+++...+ .+++..+..++.+++.||.|||+ +++ +|+||+|+||++++++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~i---~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 85 MDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHRI---MHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred CCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcCe---eccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 99999999987643 58999999999999999999997 466 999999999999999999999999987542211
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCcccccccccccc---ccchHHHHHHHHcCCCChhhhh
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE---STGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
.....|+..|+|||++.+..++.++|+|||||++|||++|..||......... ...............
T Consensus 159 --~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 229 (284)
T cd06620 159 --ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------- 229 (284)
T ss_pred --cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-------
Confidence 12356899999999998889999999999999999999999999754322110 011111111111110
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.+.+ .....+..+.+++.+||+.||++|||++|++.+..-+
T Consensus 230 ---~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 230 ---PPRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred ---CCCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 0111 0112445788999999999999999999999875443
No 239
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-35 Score=302.03 Aligned_cols=278 Identities=27% Similarity=0.423 Sum_probs=222.8
Q ss_pred cCHHHHHHH-hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhH------HHHHHHHHHHHhcCCCCCcce-EE
Q 046083 480 FSYEELAKA-TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS------KEFLAELKVLTHVHHLNLVRL-IG 549 (790)
Q Consensus 480 ~~~~~l~~~-~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~------~~~~~E~~~l~~l~h~niv~l-~g 549 (790)
+.+-|+... .+.|+.-+.||+|+||.||-+... |+.+|.|++..... ....+|-.||.+++.+.||.+ |.
T Consensus 174 WK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA 253 (591)
T KOG0986|consen 174 WKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA 253 (591)
T ss_pred HHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee
Confidence 334444333 356899999999999999987664 88999998865433 236789999999999999998 45
Q ss_pred EEecCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEE
Q 046083 550 YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVAD 629 (790)
Q Consensus 550 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~D 629 (790)
|...+.+++|+..|.||+|.-+|...+...+++..+..++.+|+.||++||..++ |.|||||+|||||+.|+++|+|
T Consensus 254 feTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~i---VYRDLKPeNILLDd~GhvRISD 330 (591)
T KOG0986|consen 254 FETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRI---VYRDLKPENILLDDHGHVRISD 330 (591)
T ss_pred ecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcce---eeccCChhheeeccCCCeEeec
Confidence 5556779999999999999999998887889999999999999999999999998 9999999999999999999999
Q ss_pred eCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHc
Q 046083 630 FGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709 (790)
Q Consensus 630 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
+|||..+..+. .....+||.+|||||+++++.|+...|+|||||++|||+.|+.||....+..
T Consensus 331 LGLAvei~~g~--~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv--------------- 393 (591)
T KOG0986|consen 331 LGLAVEIPEGK--PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV--------------- 393 (591)
T ss_pred cceEEecCCCC--ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh---------------
Confidence 99998775433 3344589999999999999999999999999999999999999997654321
Q ss_pred CCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCCcCCccccccccccccC
Q 046083 710 QPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSFYENQGLDSLMSG 789 (790)
Q Consensus 710 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~ 789 (790)
..+.+++.+.. ...+++....++..+|.+..|+.||++|--.+. ....+...+.||++-+|..+..|
T Consensus 394 ---k~eEvdrr~~~-~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg---------~ga~evk~HpfFk~lnw~rleag 460 (591)
T KOG0986|consen 394 ---KREEVDRRTLE-DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRG---------EGAQEVKEHPFFKDLNWRRLEAG 460 (591)
T ss_pred ---hHHHHHHHHhc-chhhcccccCHHHHHHHHHHHccCHHHhccCCC---------cCcchhhhCcccccCCHhHHhcc
Confidence 01112111111 112445566678888999999999999976542 24456678899999999888776
Q ss_pred C
Q 046083 790 R 790 (790)
Q Consensus 790 ~ 790 (790)
+
T Consensus 461 m 461 (591)
T KOG0986|consen 461 M 461 (591)
T ss_pred C
Confidence 4
No 240
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.6e-33 Score=294.56 Aligned_cols=244 Identities=25% Similarity=0.391 Sum_probs=197.6
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~ 562 (790)
+|+..+.||+|+||.||++... ++.+++|.+.. ...+.+.+|++++++++|||++++++.+. ++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5788999999999999999875 78899998753 23467889999999999999999999776 4568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC-CcEEEEEeCCCcccccCCc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN-FRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~-~~~kl~DfGla~~~~~~~~ 641 (790)
+++++|.+++.......+++..+.+++.+++.||.|||++++ +|+||+|+||+++++ +.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i---~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLI---LHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 999999999987655568999999999999999999999998 999999999999865 468999999998654322
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
......++..|+|||.+.+..++.++||||||+++|+|++|..||..... ...........
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--------~~~~~~~~~~~---------- 217 (256)
T cd08220 157 -KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL--------PALVLKIMSGT---------- 217 (256)
T ss_pred -cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch--------HHHHHHHHhcC----------
Confidence 12235678899999999988899999999999999999999999854321 11111111110
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....+......+.+++.+||+.+|++|||++|++++
T Consensus 218 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 218 ----FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ----CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 011222345578899999999999999999999864
No 241
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.1e-33 Score=299.74 Aligned_cols=234 Identities=24% Similarity=0.411 Sum_probs=182.2
Q ss_pred eeeecCceEEEEEEEC--------------------------CceEEEEEeChhh---HHHHHHHHHHHHhcCCCCCcce
Q 046083 497 KIGQGGFGAVFYAELR--------------------------GEKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVRL 547 (790)
Q Consensus 497 ~lG~G~fg~Vy~a~~~--------------------------g~~vavK~~~~~~---~~~~~~E~~~l~~l~h~niv~l 547 (790)
+||+|+||.||+|.+. ...+++|.++... ..+|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 6999999999999742 1258889887532 3568889999999999999999
Q ss_pred EEEEecC-eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC---
Q 046083 548 IGYCVEG-SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF--- 623 (790)
Q Consensus 548 ~g~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~--- 623 (790)
++++.++ ..++||||+++|+|..++.... ..+++..+.+++.|+++||+|||+.++ +||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i---iH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEK-GRVPVAWKITVAQQLASALSYLEDKNL---VHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHcCCc---cCCCCCcccEEEeccCccc
Confidence 9998754 5899999999999999987542 358899999999999999999999998 9999999999997643
Q ss_pred ----cEEEEEeCCCcccccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHH-hCCccccccccccccc
Q 046083 624 ----RAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELI-SAMEAVVKTNETITES 697 (790)
Q Consensus 624 ----~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~ell-tG~~p~~~~~~~~~~~ 697 (790)
.+|++|||++...... ....++..|+|||.+.+ ..++.++||||||+++|||+ +|+.||.......
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--- 229 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--- 229 (274)
T ss_pred CccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH---
Confidence 4899999988643211 12346788999998865 56899999999999999995 7888875432210
Q ss_pred cchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 698 TGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
. ...... .. ..+......+.+++.+||+.+|++|||+++|++.|+
T Consensus 230 --~----~~~~~~-------------~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 --K----ERFYEK-------------KH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred --H----HHHHHh-------------cc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 0 011110 00 011112346889999999999999999999998874
No 242
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.2e-33 Score=307.35 Aligned_cols=244 Identities=22% Similarity=0.331 Sum_probs=190.7
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
+.||+|+||.||++... +..+|+|.++.. ..+.+..|+.++.++ +||||+++++++.+ ...++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999876 678999998743 234577899999888 69999999998764 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|..++.... .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i---vHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGI---IYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTS 154 (327)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHEEEeCCCCEEEeccccceeccCCC-Ccee
Confidence 99999887543 58999999999999999999999998 999999999999999999999999987532211 1223
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|++.|+|||++.+..++.++|||||||++|||++|..||........ ..........+ ....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~--~~~~~~~~~~~------------~~~~- 219 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPD--MNTEDYLFQVI------------LEKP- 219 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcc--cccHHHHHHHH------------HhCC-
Confidence 45789999999999999999999999999999999999999964332110 01111111111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCC------HHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPS------MRAIVVA 761 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt------~~evl~~ 761 (790)
...|......+.+++.+||+.||++||+ +++++.+
T Consensus 220 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 220 -IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred -CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 1123334456889999999999999998 4566554
No 243
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=5.1e-34 Score=312.53 Aligned_cols=261 Identities=25% Similarity=0.370 Sum_probs=202.7
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh--hhHHHHHHHHHHHHhcC-C-----CCCcceEEEEe-cCeEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFLAELKVLTHVH-H-----LNLVRLIGYCV-EGSLFLV 559 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--~~~~~~~~E~~~l~~l~-h-----~niv~l~g~~~-~~~~~lv 559 (790)
+|.+.+.||+|.||.|-+|.+. ++.||||+++. ....+-..|+.+|..++ | -|+|++++++. .+++|||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV 266 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV 266 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence 7899999999999999999886 88999999974 34466778999999996 4 38999999886 6779999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC--CcEEEEEeCCCcccc
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN--FRAKVADFGLAKLTE 637 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~--~~~kl~DfGla~~~~ 637 (790)
+|.++. +|+++|.......++...+..++.||+.||.+||+.++ ||+||||+||||.+- ..+||+|||.+....
T Consensus 267 fELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~I---IHcDLKPENILL~~~~r~~vKVIDFGSSc~~~ 342 (586)
T KOG0667|consen 267 FELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGI---IHCDLKPENILLKDPKRSRIKVIDFGSSCFES 342 (586)
T ss_pred ehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe---eeccCChhheeeccCCcCceeEEecccccccC
Confidence 999976 99999998887889999999999999999999999998 999999999999654 379999999998653
Q ss_pred cCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh---
Q 046083 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR--- 714 (790)
Q Consensus 638 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 714 (790)
... ....-+..|+|||++.+..|+.+.||||||||+.||++|.+.|...++. +......+++..+...
T Consensus 343 q~v----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~-----DQl~~I~e~lG~Pp~~mL~ 413 (586)
T KOG0667|consen 343 QRV----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEY-----DQLARIIEVLGLPPPKMLD 413 (586)
T ss_pred Ccc----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHH-----HHHHHHHHHhCCCCHHHHH
Confidence 221 2456688999999999999999999999999999999998777654431 1222222222211100
Q ss_pred ---------hh-------------------------hhhhcCCcCCC--------CCCHHHHHHHHHHHHHccccCCCCC
Q 046083 715 ---------ED-------------------------LQRLVDPRLGD--------DYPIDSVRKMARLARACTQENPQLR 752 (790)
Q Consensus 715 ---------~~-------------------------l~~~~d~~l~~--------~~~~~~~~~l~~li~~Cl~~dP~~R 752 (790)
+. +....+..... ..+......+.+++.+|+++||.+|
T Consensus 414 ~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R 493 (586)
T KOG0667|consen 414 TAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAER 493 (586)
T ss_pred hccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhc
Confidence 00 00000110001 0112345678999999999999999
Q ss_pred CCHHHHHHHHHh
Q 046083 753 PSMRAIVVALMT 764 (790)
Q Consensus 753 Pt~~evl~~L~~ 764 (790)
+|..|.+.+-..
T Consensus 494 ~tp~qal~Hpfl 505 (586)
T KOG0667|consen 494 ITPAQALNHPFL 505 (586)
T ss_pred CCHHHHhcCccc
Confidence 999999886553
No 244
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=307.29 Aligned_cols=248 Identities=25% Similarity=0.413 Sum_probs=206.9
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcC-CCCCcceEEEEec-CeEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVH-HLNLVRLIGYCVE-GSLFL 558 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~~~~l 558 (790)
...|++.+.||+|.||.||+++.+ |+.+|+|.+... ..+.+.+|+.+|+++. |||||.+++.+.. ...++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 456888899999999999999886 889999998643 2357999999999998 9999999998875 46899
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC----CcEEEEEeCCCc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN----FRAKVADFGLAK 634 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~----~~~kl~DfGla~ 634 (790)
|||++.||.|.+.+... .+++.....++.+++.++.|||+.++ +||||||+|+|+... +.+|++|||++.
T Consensus 114 vmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gv---vHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGV---VHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCc---eeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 99999999999999876 29999999999999999999999998 999999999999543 579999999999
Q ss_pred ccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
.... .......+||+.|+|||++....++...||||+||++|.|++|.+||...... ..+..+.....
T Consensus 188 ~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~--------~~~~~i~~~~~-- 255 (382)
T KOG0032|consen 188 FIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEF--------EIFLAILRGDF-- 255 (382)
T ss_pred EccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChh--------HHHHHHHcCCC--
Confidence 8765 44556689999999999999999999999999999999999999999765432 11112222111
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
......-......+.++++.|+..||.+|+|+.+++++-|
T Consensus 256 ---------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpW 295 (382)
T KOG0032|consen 256 ---------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPW 295 (382)
T ss_pred ---------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence 1111112344667889999999999999999999999755
No 245
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=8e-34 Score=308.83 Aligned_cols=259 Identities=20% Similarity=0.294 Sum_probs=191.3
Q ss_pred cceeeeec--CceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 494 MGNKIGQG--GFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 494 ~~~~lG~G--~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
+.++||+| +|++||++... ++.+|+|+++.. ..+.+.+|+++++.++||||+++++++.. +..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 46789999 78999999876 789999998743 23457789999999999999999998874 5689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc-
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS- 642 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~- 642 (790)
++|+|.+++.......+++..+++++.|++.||+|||++++ +||||||+|||++.++.++++||+...........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i---iH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGY---VHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 99999999976444468999999999999999999999997 99999999999999999999999865433211110
Q ss_pred -----cccccccCCCccchhcccC--CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC---
Q 046083 643 -----VHTRLVGTFGYMPPEYAQY--GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD--- 712 (790)
Q Consensus 643 -----~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--- 712 (790)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ..........
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------~~~~~~~~~~~~~ 230 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--------MLLEKLNGTVPCL 230 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH--------HHHHHhcCCcccc
Confidence 1112346778999999976 468999999999999999999999996432210 0000000000
Q ss_pred ------Chhh-------------hhhhc---------CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 713 ------PRED-------------LQRLV---------DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 713 ------~~~~-------------l~~~~---------d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..+. +.... ...............+.+++.+||+.||++|||++|++++-.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 231 LDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred ccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 0000 00000 000000111233457889999999999999999999987543
No 246
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-33 Score=332.42 Aligned_cols=250 Identities=27% Similarity=0.421 Sum_probs=195.2
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec---CeEE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE---GSLF 557 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~ 557 (790)
..++|.+.+.||+|+||.||++... +..+|+|.+.. .....|..|+.++.+++||||+++++++.+ ..+|
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 4568999999999999999999986 67889998753 334568899999999999999999998753 3489
Q ss_pred EEEEEecCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCC----CceeecCCCCCCEEecC----------
Q 046083 558 LVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSARGLEYIHEHTV----PVYIHRDIKPANILIDK---------- 621 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~----~~~vH~dlkp~NILl~~---------- 621 (790)
|||||+++|+|.++|.... ...+++..++.|+.||+.||.|||+.+. ..||||||||+||||+.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 9999999999999997531 2469999999999999999999998651 23599999999999964
Q ss_pred -------CCcEEEEEeCCCcccccCCcccccccccCCCccchhcccC--CCCCchhhHHHHHHHHHHHHhCCcccccccc
Q 046083 622 -------NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY--GEVSPKIDVYAFGVVLYELISAMEAVVKTNE 692 (790)
Q Consensus 622 -------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~ 692 (790)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||+||||++|+.||.....
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred cccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 2358999999998653221 2234578999999999854 4588999999999999999999999964321
Q ss_pred ccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 693 TITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 693 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...+...+...+ .+. ....+..+.+|+..||+.+|.+||++.|++..
T Consensus 249 -------~~qli~~lk~~p------------~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 249 -------FSQLISELKRGP------------DLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred -------HHHHHHHHhcCC------------CCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 111111111110 010 01234578899999999999999999999854
No 247
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.3e-33 Score=298.39 Aligned_cols=247 Identities=23% Similarity=0.404 Sum_probs=194.5
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
|++.+.||+|+||.||+|... +..+++|.+.. ...+.+.+|+++++.++|+|++++++++.. ...++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 567789999999999999986 66788998864 334568899999999999999999998774 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|..++.... ..+++..+..++.|++.||.|||+.++ +||||||+|||++.++.+||+|||++....... ....
T Consensus 87 ~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i---~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~ 161 (282)
T cd06643 87 GAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKI---IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRD 161 (282)
T ss_pred CcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCcccEEEccCCCEEEccccccccccccc-cccc
Confidence 99999886532 368999999999999999999999998 999999999999999999999999987543221 1223
Q ss_pred ccccCCCccchhccc-----CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 646 RLVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~-----~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
...++..|+|||++. +..++.++|||||||++|||++|+.||..... ............
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--------~~~~~~~~~~~~-------- 225 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSEP-------- 225 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH--------HHHHHHHhhcCC--------
Confidence 356889999999984 44578899999999999999999999854321 111111111100
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+.+ ..+...+..+.+++.+||+.+|.+||++.+++++-.
T Consensus 226 --~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 226 --PTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred --CCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 000 112233467899999999999999999999986544
No 248
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.8e-33 Score=293.90 Aligned_cols=245 Identities=27% Similarity=0.451 Sum_probs=198.2
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec---CeEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE---GSLFLVY 560 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~lv~ 560 (790)
+|++.+.||.|+||.||++... +..+++|.++. ...+.+..|++++++++|+|++++++++.. ...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999875 78899998753 234568889999999999999999997752 3479999
Q ss_pred EEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHH-----hCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 561 EYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIH-----EHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 561 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH-----~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
||+++++|.+++... ....+++..++.++.+++.||.||| +.++ +|+||+|+||++++++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i---~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTV---LHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcc---eecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999998753 2346899999999999999999999 7776 99999999999999999999999999
Q ss_pred cccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
........ ......+++.|+|||.+....++.++|+||||+++|+|++|+.||..... ........
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~----- 223 (265)
T cd08217 158 KILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--------LQLASKIK----- 223 (265)
T ss_pred ccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--------HHHHHHHh-----
Confidence 87643322 12334688999999999988899999999999999999999999864321 11111111
Q ss_pred hhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 714 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.......+......+.+++.+|++.+|++||++++|+++
T Consensus 224 ---------~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 224 ---------EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---------cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 111122333455678999999999999999999999874
No 249
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2e-33 Score=301.35 Aligned_cols=246 Identities=23% Similarity=0.399 Sum_probs=198.3
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
.+|++.+.||+|+||.||++... ++.+|+|.+.. ...+.+.+|+.+++.++|+|++++++++.. ...++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 57889999999999999999864 88999998863 234568889999999999999999998875 4689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++... .+++..+..++.+++.||.|||+.++ +||||||+|||++.++.++|+|||++........ .
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i---~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-~ 171 (297)
T cd06656 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 171 (297)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEEECCCCCEEECcCccceEccCCcc-C
Confidence 999999998743 47899999999999999999999998 9999999999999999999999999876533221 1
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
.....+++.|+|||.+.+..++.++|+|||||++|+|++|..||....... ... ..... .
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~-------~~~-~~~~~------------~ 231 (297)
T cd06656 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-------ALY-LIATN------------G 231 (297)
T ss_pred cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch-------hee-eeccC------------C
Confidence 223467889999999998899999999999999999999999996432210 000 00000 0
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
......+......+.+++.+||+.+|++||++++++++=
T Consensus 232 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 270 (297)
T cd06656 232 TPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHP 270 (297)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 000111233456688999999999999999999998843
No 250
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=2.9e-33 Score=299.32 Aligned_cols=247 Identities=23% Similarity=0.419 Sum_probs=195.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEEe
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYI 563 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~~ 563 (790)
+.|++.++||+|+||.||+|... +..+++|.+... ..+.+.+|+++++.++|+|++++++++. ++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56888999999999999999885 788999998643 3456888999999999999999999876 55689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|..++.... ..+++..+..++.|++.+|+|||++++ +||||||+||+++.++.+||+|||++....... ..
T Consensus 92 ~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i---~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~-~~ 166 (292)
T cd06644 92 PGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMKI---IHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL-QR 166 (292)
T ss_pred CCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCe---eecCCCcceEEEcCCCCEEEccCccceeccccc-cc
Confidence 9999998876543 358999999999999999999999998 999999999999999999999999987542211 11
Q ss_pred ccccccCCCccchhccc-----CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 644 HTRLVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
.....++..|+|||++. ...++.++|||||||++|||++|..||..... ............
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--------~~~~~~~~~~~~------ 232 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSEP------ 232 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH--------HHHHHHHhcCCC------
Confidence 23356788999999984 34578899999999999999999999854321 111111111110
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+.. ..+......+.+++.+||+.+|++||++++++++
T Consensus 233 ----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 233 ----PTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred ----ccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 000 1122344568899999999999999999999864
No 251
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.1e-33 Score=294.31 Aligned_cols=234 Identities=23% Similarity=0.379 Sum_probs=182.6
Q ss_pred eeeeecCceEEEEEEEC--------------CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEE
Q 046083 496 NKIGQGGFGAVFYAELR--------------GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLF 557 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--------------g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~ 557 (790)
+.||+|+||.||+|.+. ...+++|.+... ....|.+|+.+++.++||||+++++++.+ ...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 46899999999999853 125888987643 23468889999999999999999999875 4589
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCc-------EEEEEe
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFR-------AKVADF 630 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~-------~kl~Df 630 (790)
++|||+++++|..++.... ..+++..+++++.|++.||+|||+.++ +||||||+|||++.++. ++++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i---vH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKDL---VHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCCe---ECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999887543 358999999999999999999999998 99999999999987664 899999
Q ss_pred CCCcccccCCcccccccccCCCccchhccc-CCCCCchhhHHHHHHHHHHHH-hCCccccccccccccccchHHHHHHHH
Q 046083 631 GLAKLTEVGSASVHTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELI-SAMEAVVKTNETITESTGLVALFEEVL 708 (790)
Q Consensus 631 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwS~Gvvl~ell-tG~~p~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
|++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..|+...... . .....
T Consensus 157 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--------~-~~~~~ 222 (262)
T cd05077 157 GIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA--------E-KERFY 222 (262)
T ss_pred CCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh--------H-HHHHH
Confidence 998754321 2245788899999886 467899999999999999998 577776432110 0 00111
Q ss_pred cCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 709 RQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 709 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
.. ... ........+.+++.+||+.||.+||++.+|++.|
T Consensus 223 ~~-------------~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 223 EG-------------QCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hc-------------Ccc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 10 000 0111235688999999999999999999999875
No 252
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-33 Score=309.46 Aligned_cols=264 Identities=21% Similarity=0.313 Sum_probs=192.6
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEec
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIE 564 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~ 564 (790)
...+|++.+.||+|+||.||+|... ++.+|+|..... ....|+.++++++|+||+++++++.++ ..++||||+.
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 140 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS 140 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC
Confidence 3467999999999999999999986 568999976533 235689999999999999999988754 5889999995
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
++|.+++.... ..+++..+++++.|++.||.|||++++ +||||||+|||++.++.+||+|||+++..... ...
T Consensus 141 -~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i---vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~ 213 (357)
T PHA03209 141 -SDLYTYLTKRS-RPLPIDQALIIEKQILEGLRYLHAQRI---IHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PAF 213 (357)
T ss_pred -CcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEECCCCCEEEecCccccccccC--ccc
Confidence 58888887543 368999999999999999999999998 99999999999999999999999999753221 122
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCcccccccccccc--ccchHHHHHHHHcC----C------C
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITE--STGLVALFEEVLRQ----P------D 712 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~--~~~~~~~~~~~~~~----~------~ 712 (790)
....||..|+|||++.+..++.++|||||||++|||+++..++......... ...........+.. + .
T Consensus 214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 293 (357)
T PHA03209 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDP 293 (357)
T ss_pred ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCC
Confidence 3356899999999999999999999999999999999876665432221100 00000111111110 0 0
Q ss_pred ChhhhhhhcCCcC--CCCC-------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 713 PREDLQRLVDPRL--GDDY-------PIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 713 ~~~~l~~~~d~~l--~~~~-------~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.......+++... ...+ .......+.+++.+||+.||++|||++|++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 0001111111000 0000 01223456679999999999999999999875
No 253
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.5e-33 Score=300.42 Aligned_cols=247 Identities=23% Similarity=0.427 Sum_probs=199.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
.+|+..+.||.|+||.||+|... ++.+++|.+.. ...+.+.+|+++++.++|+|++++++++.+ ...++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 46889999999999999999864 78999998853 234568899999999999999999998875 4589999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++... .+++.++..++.+++.||+|||++++ +|+||||+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i---~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~ 171 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQV---IHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-K 171 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEEECCCCCEEEccCccchhcccccc-c
Confidence 999999998743 48999999999999999999999998 9999999999999999999999999876543221 1
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
.....++..|+|||.+.+..++.++|||||||++|+|++|..||...... ........... +
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~--------~~~~~~~~~~~----------~ 233 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--------RALYLIATNGT----------P 233 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcCC----------c
Confidence 22346788999999999888999999999999999999999998653321 00111111000 0
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.+ ..+......+.+++.+||..+|.+||++.+++.+=+
T Consensus 234 ~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~ 271 (296)
T cd06655 234 EL--QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPF 271 (296)
T ss_pred cc--CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChH
Confidence 00 112234457889999999999999999999987544
No 254
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-35 Score=310.09 Aligned_cols=242 Identities=30% Similarity=0.467 Sum_probs=196.4
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
|.-++.||.|+||.||.|+.. .+.||||++.- +...++..|+++|++++|||.+..-|++.. ...||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 556789999999999999875 78899999963 233578999999999999999999999875 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
|-| +-.|++.-.. .++.+..+..|+.+.+.||+|||+++. ||||||+.||||.+.|.+||+|||.|....+
T Consensus 108 ClG-SAsDlleVhk-KplqEvEIAAi~~gaL~gLaYLHS~~~---IHRDiKAGNILLse~g~VKLaDFGSAsi~~P---- 178 (948)
T KOG0577|consen 108 CLG-SASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNR---IHRDIKAGNILLSEPGLVKLADFGSASIMAP---- 178 (948)
T ss_pred Hhc-cHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHhhH---HhhhccccceEecCCCeeeeccccchhhcCc----
Confidence 965 7777776443 468899999999999999999999998 9999999999999999999999999987653
Q ss_pred cccccccCCCccchhccc---CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 643 VHTRLVGTFGYMPPEYAQ---YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
...++|||.|||||++. .+.|+-|.||||||++..||.-.++|+++.+.. ..++. +.....
T Consensus 179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM-------SALYH-IAQNes------- 242 (948)
T KOG0577|consen 179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-------SALYH-IAQNES------- 242 (948)
T ss_pred -hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH-------HHHHH-HHhcCC-------
Confidence 23578999999999884 568999999999999999999999998765431 11111 111111
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
|.|+ ..+-...|.+++..||+.-|.+|||.++++.+---
T Consensus 243 ---PtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv 281 (948)
T KOG0577|consen 243 ---PTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFV 281 (948)
T ss_pred ---CCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchh
Confidence 2221 12345678999999999999999999998765443
No 255
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.8e-33 Score=296.93 Aligned_cols=247 Identities=23% Similarity=0.437 Sum_probs=184.4
Q ss_pred eeeeecCceEEEEEEEC----CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecCC
Q 046083 496 NKIGQGGFGAVFYAELR----GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~----g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~g 566 (790)
+.||+|+||.||+|... ...+++|.+... ....+.+|++.++.++|+||+++++.+.+. ..++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 36899999999999753 346888877532 235688999999999999999999988754 589999999999
Q ss_pred ChhhhhhcCCC---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc-
Q 046083 567 NLNQHLRGSGK---DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS- 642 (790)
Q Consensus 567 ~L~~~l~~~~~---~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~- 642 (790)
+|.+++..... ...++...++++.|++.||+|||++++ +||||||+|||+++++.+||+|||+++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---vH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADF---IHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCE---ecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99999976432 335788889999999999999999997 99999999999999999999999998754322111
Q ss_pred cccccccCCCccchhcccC-------CCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 643 VHTRLVGTFGYMPPEYAQY-------GEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~-------~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
......++..|+|||++.. ..++.++|||||||++|||++ |..||...... ...........
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--------~~~~~~~~~~~-- 227 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE--------QVLKQVVREQD-- 227 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH--------HHHHHHhhccC--
Confidence 1122345678999998743 356889999999999999999 67777543211 11111111110
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..+.++.+ +......+.+++..|| .||++|||++||++.|+
T Consensus 228 ---~~~~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 228 ---IKLPKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred ---ccCCCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 01111211 2234456778888898 59999999999998874
No 256
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.4e-33 Score=301.43 Aligned_cols=263 Identities=23% Similarity=0.362 Sum_probs=187.6
Q ss_pred ceeeeecCceEEEEEEEC----CceEEEEEeChhh-HHHHHHHHHHHHhcCCCCCcceEEEEec---CeEEEEEEEecCC
Q 046083 495 GNKIGQGGFGAVFYAELR----GEKAAIKKMDMQA-SKEFLAELKVLTHVHHLNLVRLIGYCVE---GSLFLVYEYIENG 566 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~----g~~vavK~~~~~~-~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~lv~e~~~~g 566 (790)
..+||+|+||.||+|... +..+|+|.++... ...+.+|++++++++||||+++++++.. ...+++|||+.+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~- 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH- 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-
Confidence 468999999999999864 4679999887543 3567889999999999999999998752 357999999875
Q ss_pred ChhhhhhcC-------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEe----cCCCcEEEEEeCCCcc
Q 046083 567 NLNQHLRGS-------GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILI----DKNFRAKVADFGLAKL 635 (790)
Q Consensus 567 ~L~~~l~~~-------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl----~~~~~~kl~DfGla~~ 635 (790)
+|.+++... ....+++..+..++.|++.||.|||+.++ +||||||+|||+ +.++.+||+|||+++.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~i---vH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWV---LHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCE---EcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 787776421 12358899999999999999999999997 999999999999 5667999999999986
Q ss_pred cccCCcc--cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccc-hHHHHHHHHcC-
Q 046083 636 TEVGSAS--VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTG-LVALFEEVLRQ- 710 (790)
Q Consensus 636 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~-~~~~~~~~~~~- 710 (790)
....... ......+++.|+|||.+.+ ..++.++|||||||++|||+||++||............ ...........
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 5432221 1223568999999999876 45899999999999999999999999654322111000 00111111110
Q ss_pred -CCChhhhhhh------------cC-CcCC--------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 711 -PDPREDLQRL------------VD-PRLG--------DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 711 -~~~~~~l~~~------------~d-~~l~--------~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
......+..+ .. .... ..........+.+|+.+|++.||.+|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~h 314 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQD 314 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcC
Confidence 0000000000 00 0000 00011123457889999999999999999999863
No 257
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.8e-33 Score=297.19 Aligned_cols=251 Identities=28% Similarity=0.466 Sum_probs=198.6
Q ss_pred HHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh--hHHHHHHHHHHHHhc-CCCCCcceEEEEecC-------
Q 046083 487 KATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ--ASKEFLAELKVLTHV-HHLNLVRLIGYCVEG------- 554 (790)
Q Consensus 487 ~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~------- 554 (790)
..+++|++.+.||+|+||.||+|... ++.+++|.+... ..+++.+|+++++++ +|+|++++++++.+.
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 35688999999999999999999985 678999988643 346789999999999 799999999988642
Q ss_pred eEEEEEEEecCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCC
Q 046083 555 SLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGL 632 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGl 632 (790)
..++||||+++++|.+++.... ...+++..+..++.|++.||.|||++++ +|+||+|+||++++++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i---~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKV---IHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCc---ccCCCCHHHEEEccCCeEEECCCcc
Confidence 2799999999999999987543 3568999999999999999999999998 9999999999999999999999999
Q ss_pred CcccccCCcccccccccCCCccchhcccC-----CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHH
Q 046083 633 AKLTEVGSASVHTRLVGTFGYMPPEYAQY-----GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEV 707 (790)
Q Consensus 633 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 707 (790)
+....... .......++..|+|||.+.. ..++.++||||||++++||++|+.||...... ......
T Consensus 160 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~ 230 (275)
T cd06608 160 SAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM--------RALFKI 230 (275)
T ss_pred ceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH--------HHHHHh
Confidence 87653222 12233568889999998753 34678999999999999999999998542211 111111
Q ss_pred HcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 708 LRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 708 ~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.... .+.+ ..+......+.+++.+||..||++|||+.+++++
T Consensus 231 ~~~~----------~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 231 PRNP----------PPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred hccC----------CCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 1110 0011 1122345678899999999999999999999863
No 258
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-33 Score=296.67 Aligned_cols=248 Identities=27% Similarity=0.453 Sum_probs=194.8
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
++|.+.+.||+|+||.||+|... ++.+++|.++.. ....+.+|+.+++.++||||+++++++.+ +..+++|||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46788899999999999999875 788999988643 33457889999999999999999998764 5689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++...+ .+++.+++.++.+++.||.|||++++ +|+||||+||+++.++.++|+|||++....... ..
T Consensus 89 ~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-~~ 162 (267)
T cd06645 89 GGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKGK---MHRDIKGANILLTDNGHVKLADFGVSAQITATI-AK 162 (267)
T ss_pred CCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEECCCCCEEECcceeeeEccCcc-cc
Confidence 9999999987654 58999999999999999999999998 999999999999999999999999987553221 11
Q ss_pred ccccccCCCccchhccc---CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 644 HTRLVGTFGYMPPEYAQ---YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~---~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.....|+..|+|||++. ...++.++|+|||||++|||++|..||...... ..... .... ..
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-------~~~~~-~~~~--------~~ 226 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-------RALFL-MTKS--------NF 226 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch-------hhHHh-hhcc--------CC
Confidence 23356889999999874 456889999999999999999999998543321 00000 0000 00
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..+.... ....+..+.+++.+||+.+|++||++++|+++
T Consensus 227 ~~~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 227 QPPKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CCCcccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0011100 01233468899999999999999999998864
No 259
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.7e-33 Score=292.14 Aligned_cols=249 Identities=26% Similarity=0.425 Sum_probs=199.0
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
.++|++.+.||+|+||.||+|... ++.+++|.+... ..+.+.+|++++++++|||++++++++.+ ...+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 367899999999999999999875 678999988643 45678999999999999999999998764 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++.... ..+++..+..++.|++.||.|||++++ +|+||+|+||++++++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i---~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 82 CGGGSLQDIYQVTR-GPLSELQIAYVCRETLKGLAYLHETGK---IHRDIKGANILLTEDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCc---eecCCChhhEEECCCCCEEECccccchhhhhhhh-
Confidence 99999999987642 358999999999999999999999998 9999999999999999999999999876543221
Q ss_pred cccccccCCCccchhcccCC---CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 643 VHTRLVGTFGYMPPEYAQYG---EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~---~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
......++..|+|||.+... .++.++|+||||+++|||++|+.||....... . ....... .
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~-------~-~~~~~~~--------~ 220 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR-------A-LFLISKS--------N 220 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH-------H-HHHHHhc--------c
Confidence 12235678899999999776 88999999999999999999999986533210 0 0000000 0
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
...+.+ ..+...+..+.+++.+||+.+|.+|||+.+|+.
T Consensus 221 ~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 221 FPPPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred CCCccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000011 112344567899999999999999999999875
No 260
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.8e-33 Score=292.04 Aligned_cols=243 Identities=26% Similarity=0.416 Sum_probs=196.2
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh--------hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--------QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLV 559 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv 559 (790)
+|+..+.||+|+||.||+|... ++.+++|.+.. +..+.+.+|++++++++|+|++++++++.+ ...+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677899999999999999885 78999998753 234678999999999999999999998875 458999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+++++|.+++.... .+++..+..++.+++.||+|||+.++ +|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNT---VHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999997653 58899999999999999999999998 99999999999999999999999998865432
Q ss_pred CcccccccccCCCccchhcccCCC-CCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGE-VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~-~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
. ......++..|++||.+.... ++.++|+||||+++|+|++|+.||..... . ..........
T Consensus 156 ~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-------~-~~~~~~~~~~------- 218 (258)
T cd06632 156 S--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-------V-AAVFKIGRSK------- 218 (258)
T ss_pred c--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-------H-HHHHHHHhcc-------
Confidence 2 223456788999999987776 89999999999999999999999854321 0 0011111000
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.....+......+.+++.+||+.+|.+||++++++.+
T Consensus 219 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 219 ------ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred ------cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 0011223345678899999999999999999999863
No 261
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.7e-33 Score=294.52 Aligned_cols=247 Identities=24% Similarity=0.451 Sum_probs=194.9
Q ss_pred CcccceeeeecCceEEEEEEEC---CceEEEEEeCh-------------hhHHHHHHHHHHHHh-cCCCCCcceEEEEec
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR---GEKAAIKKMDM-------------QASKEFLAELKVLTH-VHHLNLVRLIGYCVE 553 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~---g~~vavK~~~~-------------~~~~~~~~E~~~l~~-l~h~niv~l~g~~~~ 553 (790)
+|++.+.||+|+||.||+|... ++.+|+|.+.. ....++..|+.++.+ ++|||++++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 4778899999999999999985 47899997642 123457778888865 799999999998874
Q ss_pred -CeEEEEEEEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCCCcEEEEE
Q 046083 554 -GSLFLVYEYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKNFRAKVAD 629 (790)
Q Consensus 554 -~~~~lv~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~~~~kl~D 629 (790)
+..+++|||+++++|.+++... ....+++..+++++.+++.||.|||+ .++ +|+||+|+|||++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i---~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRI---VHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCce---eecCCCHHHEEECCCCcEEEec
Confidence 5689999999999999988542 23468999999999999999999996 566 9999999999999999999999
Q ss_pred eCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHc
Q 046083 630 FGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709 (790)
Q Consensus 630 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
||++....... ......++..|++||.+.+..++.++|+||||+++|||++|+.||..... .........
T Consensus 158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--------~~~~~~~~~ 227 (269)
T cd08528 158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--------LSLATKIVE 227 (269)
T ss_pred ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--------HHHHHHHhh
Confidence 99998654332 23345688999999999988899999999999999999999999854321 111111111
Q ss_pred CCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 710 QPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 710 ~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
. .............+.+++.+||+.||++||++.|+.+++.
T Consensus 228 ~-------------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 228 A-------------VYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred c-------------cCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1 1000001123457889999999999999999999999875
No 262
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1e-33 Score=297.10 Aligned_cols=234 Identities=24% Similarity=0.426 Sum_probs=184.2
Q ss_pred eeeeecCceEEEEEEEC---------CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 496 NKIGQGGFGAVFYAELR---------GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~---------g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+.||+|+||.||+|... ...+++|.+... ..+++.+|+.+++.++|||++++++++.. ...++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 46899999999999764 224788877643 33568899999999999999999998875 568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCc--------EEEEEeCCCc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFR--------AKVADFGLAK 634 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~--------~kl~DfGla~ 634 (790)
+++|+|.++++..+. .+++..+++++.|++.||+|||++++ +||||||+||+++.++. ++++|||++.
T Consensus 81 ~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i---iH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDKGL---THGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 999999999986543 68999999999999999999999998 99999999999987765 6999999987
Q ss_pred ccccCCcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCC-ccccccccccccccchHHHHHHHHcCCC
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAM-EAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
.... .....++..|+|||++.+. .++.++||||||+++|||++|. .|+...... .. ......
T Consensus 157 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--------~~-~~~~~~-- 220 (258)
T cd05078 157 TVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--------KK-LQFYED-- 220 (258)
T ss_pred ccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--------HH-HHHHHc--
Confidence 5432 1224578899999999864 5799999999999999999995 444322110 00 001110
Q ss_pred ChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 713 PREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 713 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
....+.....++.+++.+||+.+|++|||++++++.|
T Consensus 221 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 221 -------------RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -------------cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 0112223345789999999999999999999999876
No 263
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-34 Score=310.57 Aligned_cols=241 Identities=22% Similarity=0.398 Sum_probs=195.9
Q ss_pred ccceeeeecCceEEEEEEEC--CceEEEEEeC-------hhhHHHHHHHHHHHHhcCCCCCcceEEEEecC---eEEEEE
Q 046083 493 SMGNKIGQGGFGAVFYAELR--GEKAAIKKMD-------MQASKEFLAELKVLTHVHHLNLVRLIGYCVEG---SLFLVY 560 (790)
Q Consensus 493 ~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~-------~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~---~~~lv~ 560 (790)
+....||+|.|-+||||.+. |-.||--.++ ....+.|..|+.+|+.|+|+||+++|.++.+. ...+|.
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 44578999999999999886 5555532221 34457899999999999999999999988743 378999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC-CCcEEEEEeCCCcccccC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK-NFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~-~~~~kl~DfGla~~~~~~ 639 (790)
|.|..|+|+.|+.+.+ .++.+....+++||++||.|||++. |||+|||||.+||+|+. .|.+||+|+|||..+...
T Consensus 123 EL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 9999999999999865 4888999999999999999999988 89999999999999976 489999999999987543
Q ss_pred CcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
. ...+.|||.|||||+.. ..|++..||||||+.|+||+|+..|+..-. +-...+..+..... ...+.+
T Consensus 200 ~---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~-------n~AQIYKKV~SGiK-P~sl~k 267 (632)
T KOG0584|consen 200 H---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECT-------NPAQIYKKVTSGIK-PAALSK 267 (632)
T ss_pred c---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhC-------CHHHHHHHHHcCCC-HHHhhc
Confidence 3 23478999999999988 899999999999999999999999985432 23344444444322 233444
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+-| .++.++|.+|+.. .++|||+.|++..
T Consensus 268 V~d------------Pevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 268 VKD------------PEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred cCC------------HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 333 3578999999999 9999999999873
No 264
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=4.2e-33 Score=299.47 Aligned_cols=262 Identities=25% Similarity=0.400 Sum_probs=196.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
++|++.+.||+|+||.||+|... ++.+|+|.++.. ....+.+|+.++++++||||+++++++.+ ...++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56889999999999999999875 788999988632 23467789999999999999999998874 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
++ ++|.+++.... ..+++..+..++.|++.||+|||++++ +|+||||+|||+++++.+||+|||++........
T Consensus 86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~i---~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 159 (301)
T cd07873 86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRKV---LHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 159 (301)
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-
Confidence 97 58999887643 358899999999999999999999998 9999999999999999999999999975432221
Q ss_pred cccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 643 VHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
......+++.|+|||.+.+. .++.++|||||||++|||++|+.||...... .........+..+. ...+..++
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~ 233 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE-----EQLHFIFRILGTPT-EETWPGIL 233 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHcCCCC-hhhchhhh
Confidence 12234568899999988654 5788999999999999999999998654321 11111111111110 01111111
Q ss_pred C---------CcCCCC----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 722 D---------PRLGDD----YPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 722 d---------~~l~~~----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
. +..... ........+.+|+.+|++.||.+|||++|++++-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 0 111000 01123456889999999999999999999987544
No 265
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.8e-33 Score=294.19 Aligned_cols=249 Identities=25% Similarity=0.470 Sum_probs=194.5
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-------------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-------------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG- 554 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-------------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~- 554 (790)
+|...+.||+|+||.||+|... ++.+|+|.++.. ..+.+.+|+.++++++|+|++++++++...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677899999999999999864 789999987521 124578899999999999999999998754
Q ss_pred eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
..++||||+++++|.++++..+ .+++..+..++.+++.||.|||++++ +|+||+|+||+++.++.++|+|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSKGI---LHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCe---eecCCChhhEEEcCCCeEEEeeccccc
Confidence 5899999999999999998753 58999999999999999999999997 999999999999999999999999997
Q ss_pred ccccCCcc-cccccccCCCccchhcccCCC--CCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCC
Q 046083 635 LTEVGSAS-VHTRLVGTFGYMPPEYAQYGE--VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711 (790)
Q Consensus 635 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (790)
........ ......++..|+|||.+.... ++.++|+||||+++|||++|..||..... ..... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-------~~~~~-~~~~~~ 228 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-------IAAMF-KLGNKR 228 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-------HHHHH-Hhhccc
Confidence 65322111 122346788999999987654 88999999999999999999999853221 11111 111000
Q ss_pred CChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 712 DPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 712 ~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
................+.+++.+||+.+|.+||++++|+++
T Consensus 229 ---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 229 ---------SAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ---------cCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00011111112345678999999999999999999999875
No 266
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.1e-33 Score=292.71 Aligned_cols=245 Identities=28% Similarity=0.463 Sum_probs=197.9
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|++.+.||+|+||.||++... +..+|+|.+... ..+.+.+|++++++++|+|++++++.+.+ +..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5788999999999999999986 788999998643 34568899999999999999999998875 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC-cEEEEEeCCCcccccCCc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~-~~kl~DfGla~~~~~~~~ 641 (790)
+++++|.+++.......+++..+..++.+++.||.|||+.++ +|+||+|+||++++++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i---~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKI---LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 999999999986555568999999999999999999999998 9999999999999885 46999999998654322
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
.......|++.|+|||.+....++.++|+||||+++|||++|..||.... ...........
T Consensus 157 ~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~----------- 217 (257)
T cd08225 157 ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN--------LHQLVLKICQG----------- 217 (257)
T ss_pred ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHhcc-----------
Confidence 12223468889999999988889999999999999999999999985322 11122221111
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.. ...+......+.+++.+||+.+|++|||+.|++.+
T Consensus 218 --~~-~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 218 --YF-APISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred --cC-CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 00 01112334578899999999999999999999864
No 267
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-34 Score=298.01 Aligned_cols=243 Identities=26% Similarity=0.454 Sum_probs=206.5
Q ss_pred cccceeeeecCceEEEEEEE--CCceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~--~g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~~ 563 (790)
|.+.+.||+|.|..|-.|+. .|+.||||++... ....++.|++.|+-++|||||+||.+.. +..+|||+|.-
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 66678999999999999975 4999999998753 2346889999999999999999999876 45699999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEe-cCCCcEEEEEeCCCcccccCCcc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILI-DKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl-~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
++|+|++|+-+.. ..+.+....+++.||+.|+.|+|+..+ |||||||+||.+ ..-|-+||.|||++..+.++.
T Consensus 100 D~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHV---VHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~-- 173 (864)
T KOG4717|consen 100 DGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHV---VHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK-- 173 (864)
T ss_pred CCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhh---hcccCCcceeEEeeecCceEeeeccccccCCCcc--
Confidence 9999999997654 358999999999999999999999998 999999999755 667899999999998765443
Q ss_pred cccccccCCCccchhcccCCCCC-chhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVS-PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s-~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
..+..+|+..|-|||.+.+..|+ ++.||||||||||-|++|++||...+.. +.+..++
T Consensus 174 kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS---------------------ETLTmIm 232 (864)
T KOG4717|consen 174 KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS---------------------ETLTMIM 232 (864)
T ss_pred hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch---------------------hhhhhhh
Confidence 34567899999999999999886 5799999999999999999999765542 3344455
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
|-+. ..|.....+..+||..||..||.+|-+.+||+..-|
T Consensus 233 DCKY--tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 233 DCKY--TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred cccc--cCchhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 5443 446677888999999999999999999999987555
No 268
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.6e-33 Score=297.44 Aligned_cols=261 Identities=28% Similarity=0.435 Sum_probs=198.1
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
++|++.+.||+|+||.||+|... ++.+++|.++.. ..+.+.+|++++++++|+||+++++++.+ +..+++||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36889999999999999999886 778999987642 23568899999999999999999998875 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|++++.|..+.... ..+++..+..++.+++.||.|||+.++ +|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHNI---IHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99987777666543 348999999999999999999999997 9999999999999999999999999987654433
Q ss_pred ccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh------
Q 046083 642 SVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR------ 714 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 714 (790)
.......++..|+|||++... .++.++||||||+++|||++|+.||...... +...............
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI-----DQLYLIQKCLGPLPPSHQELFS 230 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCCHHHhhhcc
Confidence 233345678899999999887 8899999999999999999999988643221 0000111111100000
Q ss_pred --hhhh--hhcCCc----CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 715 --EDLQ--RLVDPR----LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 715 --~~l~--~~~d~~----l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
.... +..+.. ....++...+.++.+++.+||+.+|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 231 SNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000 000000 000112223677999999999999999999999875
No 269
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-34 Score=304.28 Aligned_cols=246 Identities=26% Similarity=0.433 Sum_probs=198.7
Q ss_pred cCcccceeeeecCceEEEEEEEC-CceEEEEEeCh-----hhHHHHHHHHHHHHhc-CCCCCcceEEEEe-cCeEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDM-----QASKEFLAELKVLTHV-HHLNLVRLIGYCV-EGSLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~-~~~~~lv~e 561 (790)
..|++.++||+||.+.||++... .+.+|+|++.. ....-|.+|+.+|.++ .|.+|++|++|.. ++.+|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 45888999999999999999886 56778877653 3445699999999999 5999999999986 667999999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|-+. +|..+|.........| .+..+..|++.++.++|.+++ ||.||||.|+|+-. |.+||+|||+|..+.....
T Consensus 441 ~Gd~-DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~gI---VHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTT 514 (677)
T KOG0596|consen 441 CGDI-DLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHGI---VHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTT 514 (677)
T ss_pred cccc-cHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhce---eecCCCcccEEEEe-eeEEeeeechhcccCcccc
Confidence 9765 9999999877666667 778899999999999999998 99999999998865 5899999999998766554
Q ss_pred ccc-cccccCCCccchhcccCC-----------CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHc
Q 046083 642 SVH-TRLVGTFGYMPPEYAQYG-----------EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709 (790)
Q Consensus 642 ~~~-~~~~gt~~y~aPE~~~~~-----------~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
... ..-+||+.||+||.+... ..++++||||+|||||+|+.|+.||..... .
T Consensus 515 sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n----------~------ 578 (677)
T KOG0596|consen 515 SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN----------Q------ 578 (677)
T ss_pred ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH----------H------
Confidence 433 346899999999988543 256899999999999999999999854211 1
Q ss_pred CCCChhhhhhhcCCcCCCCCCH-HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 710 QPDPREDLQRLVDPRLGDDYPI-DSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 710 ~~~~~~~l~~~~d~~l~~~~~~-~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...+..+.+|...-+||. ....++.++|+.||+.||.+|||..|++++
T Consensus 579 ----~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 579 ----IAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ----HHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 124556666654444442 122338999999999999999999999874
No 270
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4.7e-33 Score=294.27 Aligned_cols=249 Identities=25% Similarity=0.443 Sum_probs=194.4
Q ss_pred cccceeeeecCceEEEEEEEC-----CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-------
Q 046083 492 FSMGNKIGQGGFGAVFYAELR-----GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG------- 554 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~-----g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------- 554 (790)
|.+.+.||+|+||.||+|.+. +..+|||.+.. ...+++.+|++++++++|||++++++++...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999863 57899998864 2345688999999999999999999987532
Q ss_pred eEEEEEEEecCCChhhhhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEe
Q 046083 555 SLFLVYEYIENGNLNQHLRGSG----KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADF 630 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~----~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~Df 630 (790)
..++++||+.+|+|.+++.... ...+++...++++.+++.||+|||+.++ +||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i---~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNF---IHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE---eecccchhhEEEcCCCCEEECcc
Confidence 1478999999999998875321 2357899999999999999999999997 99999999999999999999999
Q ss_pred CCCcccccCCcc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccchHHHHHHHH
Q 046083 631 GLAKLTEVGSAS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTGLVALFEEVL 708 (790)
Q Consensus 631 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
|+++........ ......+++.|++||.+....++.++||||||+++|||++ |+.||..... ........
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--------~~~~~~~~ 229 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--------SEIYNYLI 229 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--------HHHHHHHH
Confidence 999865432211 1112334678999999998889999999999999999999 7888754321 11111111
Q ss_pred cCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 709 RQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 709 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.... ...+......+.+++.+||+.+|++||++.|+++.|..+
T Consensus 230 ~~~~--------------~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 230 KGNR--------------LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCCc--------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1100 011123446799999999999999999999999999865
No 271
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.7e-33 Score=292.92 Aligned_cols=251 Identities=27% Similarity=0.436 Sum_probs=200.6
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
++|++.+.||.|+||.||+|... +..+++|++.. .....+.+|++.++.++|+|++++++.+.+ ...+++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47899999999999999999874 77899998863 234678999999999999999999997764 458999999
Q ss_pred ecCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 563 IENGNLNQHLRGSGK-DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
+++++|.++++.... ..+++.....++.|++.||+|||+.++ +|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i---~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQ---IHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976432 468999999999999999999999998 9999999999999999999999999876644322
Q ss_pred c---cccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 642 S---VHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 642 ~---~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
. ......|+..|+|||.+... .++.++|+||||+++|||++|+.||...... ...........
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~----- 224 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--------KVLMLTLQNDP----- 224 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--------hhHHHHhcCCC-----
Confidence 2 12334688999999998877 7899999999999999999999998643221 11111111110
Q ss_pred hhhcCCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 718 QRLVDPRLGDDY-PIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 718 ~~~~d~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+.+.... ....+..+.+++.+||+.||++||++++++++
T Consensus 225 -----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 225 -----PSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred -----CCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1111111 12345678999999999999999999999864
No 272
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3e-33 Score=297.15 Aligned_cols=250 Identities=24% Similarity=0.433 Sum_probs=198.7
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
.++|++.+.||.|+||.||++... +..+++|.... ...+.+..|++++++++|+|++++++++.+ ...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356889999999999999999885 78899998864 334578899999999999999999998874 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++...+ ..+++..+.+++.|++.||.|||+.++ +|+||+|+||+++.++.++|+|||++........
T Consensus 84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~i---~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (280)
T cd06611 84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHKV---IHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ- 158 (280)
T ss_pred cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCChhhEEECCCCCEEEccCccchhhccccc-
Confidence 99999999987643 358999999999999999999999998 9999999999999999999999999875432221
Q ss_pred cccccccCCCccchhccc-----CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 643 VHTRLVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
......+++.|++||.+. ...++.++|+||||+++|||++|+.||..... ......+.....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~----- 225 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP--------MRVLLKILKSEP----- 225 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH--------HHHHHHHhcCCC-----
Confidence 122356889999999875 34578899999999999999999999864321 111111111100
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+.+ ..+......+.+++.+||+.+|.+||++++++++-+
T Consensus 226 -----~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 226 -----PTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred -----CCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChh
Confidence 011 112234457889999999999999999999988644
No 273
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=6e-33 Score=298.82 Aligned_cols=259 Identities=24% Similarity=0.379 Sum_probs=199.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|++.+.||+|+||.||++... ++.+++|.++.. ..+.+.+|+++++.++||||+++++.+.. +..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47889999999999999999886 678999988643 23467889999999999999999998764 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++++|.+++...+ .+++..+..++.+++.||.|||++++ +||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYGI---VHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999997653 58999999999999999999999998 999999999999999999999999987421110
Q ss_pred c--------------ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHH
Q 046083 641 A--------------SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEE 706 (790)
Q Consensus 641 ~--------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 706 (790)
. .......++..|+|||.+.+..++.++|+||||+++|||++|..||..... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--------~~~~~~ 227 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFGQ 227 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 0 001123578899999999888999999999999999999999999853221 111111
Q ss_pred HHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCC
Q 046083 707 VLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWD 773 (790)
Q Consensus 707 ~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~ 773 (790)
..... ...+.. +...+..+.+++.+||+.+|++||++.++.+.|...-....+|+
T Consensus 228 ~~~~~--------~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~ 282 (305)
T cd05609 228 VISDD--------IEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWN 282 (305)
T ss_pred HHhcc--------cCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHH
Confidence 11110 000111 11234568899999999999999997666665555333334443
No 274
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=7.1e-33 Score=291.16 Aligned_cols=246 Identities=30% Similarity=0.490 Sum_probs=195.8
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|...+.||+|+||.||+|... +..+++|.++.. ..+.+.+|++++++++|+||+++++++.+ ...++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999874 788999988632 45678999999999999999999998765 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++.... .+++..+..++.+++.||.|||+.++ +|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i---~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHGI---VHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 99999999998643 47899999999999999999999998 99999999999999999999999999876433322
Q ss_pred ccc---ccccCCCccchhcccCCC---CCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 643 VHT---RLVGTFGYMPPEYAQYGE---VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 643 ~~~---~~~gt~~y~aPE~~~~~~---~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
... ...++..|++||++.... .+.++||||||+++|||++|+.||...... ..........
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~------ 222 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-------FQIMFHVGAG------ 222 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-------HHHHHHHhcC------
Confidence 211 346788999999998766 889999999999999999999998643211 0000000000
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
..+.+.. .......+.+++.+||+.+|.+|||+++++.
T Consensus 223 ----~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 223 ----HKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ----CCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0011100 1122556789999999999999999999875
No 275
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=3e-33 Score=285.71 Aligned_cols=260 Identities=24% Similarity=0.359 Sum_probs=211.0
Q ss_pred CHHHHHHHhcCcccceeeeecCceEEEEEEECC-------ceEEEEEeChhh----HHHHHHHHHHHHhcCCCCCcceEE
Q 046083 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELRG-------EKAAIKKMDMQA----SKEFLAELKVLTHVHHLNLVRLIG 549 (790)
Q Consensus 481 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~g-------~~vavK~~~~~~----~~~~~~E~~~l~~l~h~niv~l~g 549 (790)
...++.....+++....+-+|.||.||+|.|.. +.+.+|.++... ...+..|..++..+.|||+..+.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 456777777889999999999999999997752 345666665432 245788888999999999999999
Q ss_pred EEecC--eEEEEEEEecCCChhhhhhc------CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC
Q 046083 550 YCVEG--SLFLVYEYIENGNLNQHLRG------SGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK 621 (790)
Q Consensus 550 ~~~~~--~~~lv~e~~~~g~L~~~l~~------~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~ 621 (790)
++.+. ..+++|.++.-|+|..||.. ...+.++-.+...++.|++.|++|||++++ ||.||..+|+++|+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~V---iHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGV---IHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCc---ccchhhhhcceehh
Confidence 98754 37999999999999999982 234568888899999999999999999998 99999999999999
Q ss_pred CCcEEEEEeCCCcccccCCcccc-cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccccccc
Q 046083 622 NFRAKVADFGLAKLTEVGSASVH-TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETITESTG 699 (790)
Q Consensus 622 ~~~~kl~DfGla~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~~~~~ 699 (790)
..++||+|-.+++.+.+.+.... .....+..||+||.+.+..|+..+|||||||+||||+| |+.|+...++.
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf------ 505 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF------ 505 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH------
Confidence 99999999999997765544322 22345678999999999999999999999999999997 88887654331
Q ss_pred hHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 700 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
.....+....+-.-|.+++.++..+|..||..+|++||++++++.-|++.
T Consensus 506 ----------------Em~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 506 ----------------EMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred ----------------HHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 11222222222333667889999999999999999999999999988865
No 276
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=5.2e-33 Score=293.03 Aligned_cols=248 Identities=24% Similarity=0.453 Sum_probs=197.6
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh---------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ---------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFL 558 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~l 558 (790)
+|+..+.||+|+||.||++... ++.+|+|.+... ..+.+.+|++++++++|+|++++++++.++ ..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4778899999999999999874 789999988632 246789999999999999999999998754 5899
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC-cEEEEEeCCCcccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTE 637 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~-~~kl~DfGla~~~~ 637 (790)
||||+++++|.+++.... .+++..+..++.|++.||.|||++++ +|+||+|+||+++.++ .+||+|||++....
T Consensus 81 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i---~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQI---IHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 999999999999997643 58899999999999999999999998 9999999999998776 59999999997664
Q ss_pred cCCcc---cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 638 VGSAS---VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 638 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
..... ......++..|+|||.+.+..++.++|+||||++++||++|..||...... .......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~--------- 221 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS-----NHLALIF--------- 221 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc-----chHHHHH---------
Confidence 32111 112346788999999998888999999999999999999999998543211 1111111
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+..........+......+.+++.+|++.+|++||++.|++.+
T Consensus 222 ----~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 222 ----KIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred ----HHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 1111111123344556778999999999999999999999853
No 277
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=4.9e-33 Score=296.12 Aligned_cols=261 Identities=27% Similarity=0.426 Sum_probs=197.4
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~ 562 (790)
+|++.+.||+|+||.||+|... ++.+++|.+... ..+.+.+|+.++++++|||++++++++.++ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788999999999999999975 789999998643 246789999999999999999999988754 58999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+ +++|.+++.... ..+++..++.++.+++.||+|||++++ +|+||||+||+++.++.++|+|||++.........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGI---MHRDLKPANLLISADGVLKIADFGLARLFSEEEPR 155 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC
Confidence 9 999999987654 469999999999999999999999997 99999999999999999999999999866543322
Q ss_pred cccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh-------
Q 046083 643 VHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR------- 714 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 714 (790)
......++..|+|||.+.+. .++.++||||||++++||++|.++|...... ............+...
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-----EQLAIVFRTLGTPNEETWPGLTS 230 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-----HHHHHHHHHcCCCChHHHhhccC
Confidence 22335688899999998654 4689999999999999999997777543211 0111111111111000
Q ss_pred -hhhhhhcCCcCC----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 -EDLQRLVDPRLG----DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 -~~l~~~~d~~l~----~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
........+... .....+....+.+++.+|++.+|++|||+++++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 231 LPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred cchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000000 00011334788999999999999999999999875
No 278
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-32 Score=293.66 Aligned_cols=256 Identities=25% Similarity=0.396 Sum_probs=200.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec---CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE---GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~lv~ 560 (790)
++|+..+.||.|++|.||++... ++.+|+|.+... ...++.+|++++++++||||+++++++.+ +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46888999999999999999985 788999988642 34668999999999999999999998863 2489999
Q ss_pred EEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 561 EYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 561 e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
||+++++|.+++... ....+++.....++.+++.||.|||+.++ +|+||+|+||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i---~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKI---IHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999987642 23458899999999999999999999998 9999999999999999999999999875432
Q ss_pred CCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
.. .....++..|+|||.+.+..++.++||||||+++|||++|..||....... ...............
T Consensus 158 ~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~------ 225 (287)
T cd06621 158 SL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP---LGPIELLSYIVNMPN------ 225 (287)
T ss_pred cc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC---CChHHHHHHHhcCCc------
Confidence 21 123457889999999998999999999999999999999999987543210 111112222221110
Q ss_pred hhcCCcCCCCCC--HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 719 RLVDPRLGDDYP--IDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 719 ~~~d~~l~~~~~--~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
+.+....+ ......+.+++.+||+.+|++|||+.|++.+-+-
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 226 ----PELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred ----hhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 01100101 1234678999999999999999999999985543
No 279
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.5e-33 Score=300.51 Aligned_cols=260 Identities=26% Similarity=0.376 Sum_probs=195.4
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChhh--------HHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA--------SKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLV 559 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~--------~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv 559 (790)
+|++.+.||+|+||.||+|... ++.+++|.+.... ...+..|++++++++|+||+++++++.+ ...++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778899999999999999875 7899999986432 2356789999999999999999998875 458999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+ +++|.+++.... ..+++..++.++.|+++||.|||++++ +|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i---~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWI---LHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCe---eecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 889999998654 369999999999999999999999998 99999999999999999999999999865432
Q ss_pred CcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh----
Q 046083 640 SASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR---- 714 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 714 (790)
.. ......++..|+|||.+.+ ..++.++|||||||++|||++|.++|...... ..+..... ....+...
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~ 229 (298)
T cd07841 156 NR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI----DQLGKIFE-ALGTPTEENWPG 229 (298)
T ss_pred Cc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH----HHHHHHHH-HcCCCchhhhhh
Confidence 21 1223356788999998864 46789999999999999999997776543221 00111111 11110000
Q ss_pred -hhhhhhcCCcCCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 -EDLQRLVDPRLGDDY-----PIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 -~~l~~~~d~~l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..+............ .......+.+++.+||+.+|++|||++|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000011110000111 12335678899999999999999999999984
No 280
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1e-32 Score=292.62 Aligned_cols=241 Identities=24% Similarity=0.420 Sum_probs=195.3
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEec
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIE 564 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~ 564 (790)
|+..+.||+|+||.||+|... +..+|+|..... ..+.+.+|++++.+++|||++++++++.++ ..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 667889999999999999874 789999987632 335688999999999999999999988754 5899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+++|.+++... .+++..+..++.+++.++.|||+.++ +|+||+|+||+++.++.++|+|||++........ ..
T Consensus 86 ~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~-~~ 158 (277)
T cd06641 86 GGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-KR 158 (277)
T ss_pred CCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCe---ecCCCCHHhEEECCCCCEEEeecccceecccchh-hh
Confidence 99999998743 58999999999999999999999998 9999999999999999999999999876543221 12
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
....++..|+|||.+.+..++.++|+|||||++|||++|..|+...... ..........
T Consensus 159 ~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~------------- 217 (277)
T cd06641 159 NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--------KVLFLIPKNN------------- 217 (277)
T ss_pred ccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--------HHHHHHhcCC-------------
Confidence 2346788999999999888999999999999999999999998542210 1111111100
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....+...+..+.+++.+||+.+|.+||++.+++++
T Consensus 218 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 218 -PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred -CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 011222345678899999999999999999999986
No 281
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=9.2e-33 Score=294.02 Aligned_cols=261 Identities=29% Similarity=0.411 Sum_probs=195.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e 561 (790)
++|+..+.||+|+||.||+|... ++.+|+|++... ..+.+.+|++++++++|+|++++++++..+ ..++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999986 789999987532 235678999999999999999999988754 5899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|++++.|..++.... .+++..++.++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~~i---~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKHNC---IHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 999998888776533 58999999999999999999999998 9999999999999999999999999986643321
Q ss_pred ccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC-------
Q 046083 642 SVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP------- 713 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 713 (790)
......++..|+|||.+.+ ..++.++||||||+++|||++|..||....... ... ...........
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD----QLY-LIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH----HHH-HHHHHhCCCChHHhhhcc
Confidence 1223457789999999876 457899999999999999999999986433210 000 01111100000
Q ss_pred -hhhhhhhcCCcCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 714 -REDLQRLVDPRLGDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 714 -~~~l~~~~d~~l~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.........+......+ ......+.+++.+||+.+|++||++.|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000000111000001 1234678899999999999999999998764
No 282
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.5e-33 Score=292.97 Aligned_cols=248 Identities=28% Similarity=0.487 Sum_probs=199.3
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~ 562 (790)
++|+..+.||+|+||.||++... ++.+++|.+... ..+++.+|++++++++||||+++++++. +...++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 36788899999999999999986 788999987642 3456889999999999999999999876 4568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
+++++|.+++.... ..+++....+++.+++.||+|||+ .++ +|+||||+||++++++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i---~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKI---IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCe---ecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 99999999998653 468999999999999999999999 887 9999999999999999999999999875532211
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
....++..|+|||.+.+..++.++||||||+++|+|++|..||....... ...............
T Consensus 157 ---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~--------- 221 (265)
T cd06605 157 ---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP---DGIFELLQYIVNEPP--------- 221 (265)
T ss_pred ---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc---ccHHHHHHHHhcCCC---------
Confidence 12567889999999999999999999999999999999999986543211 111112222221110
Q ss_pred CCcCCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 722 DPRLGDDYPID-SVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 722 d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...+.. ....+.+++.+||..+|++|||+.+++.+
T Consensus 222 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 222 -----PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred -----CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 111111 45678899999999999999999999864
No 283
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.5e-33 Score=300.12 Aligned_cols=261 Identities=26% Similarity=0.394 Sum_probs=195.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
++|+..+.||+|+||.||+|.+. ++.+|+|.+... ..+.+.+|+++++.++||||+++++++.+ +..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999985 789999987532 23568899999999999999999998875 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+++++|.++..... .+++..++.++.+++.||+|||+.++ +|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i---~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHNI---IHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 999999988776533 48999999999999999999999998 999999999999999999999999988654332
Q ss_pred ccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh------
Q 046083 642 SVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR------ 714 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 714 (790)
.......++..|+|||++.+ ..++.++||||||+++|||++|.+||...... ..... ...........
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~ 229 (286)
T cd07846 155 EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI----DQLYH-IIKCLGNLIPRHQEIFQ 229 (286)
T ss_pred cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH----HHHHH-HHHHhCCCchhhHHHhc
Confidence 22233567889999999875 35788999999999999999999888543210 00000 01111100000
Q ss_pred --hhhhhhcCCcCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 --EDLQRLVDPRLGDD-----YPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 --~~l~~~~d~~l~~~-----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.....+..+..... .....+..+.+++.+||+.+|++||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 230 KNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred cchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000001111000 011345678999999999999999999999864
No 284
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=7.6e-33 Score=295.76 Aligned_cols=240 Identities=28% Similarity=0.471 Sum_probs=197.1
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++|++.+.||+|+||.||++... ++.+|+|.+... ..+.+.+|++++++++||||+++++++.++ ..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47889999999999999999885 789999988642 345688999999999999999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++++|.+++.... .+++..+..++.|++.||.|||+.++ +|+||+|+|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~~i---~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSLDI---VYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 9999999999997653 58999999999999999999999997 99999999999999999999999999865432
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.....+++.|+|||.+.+...+.++|+||||+++|||++|+.||..... ..........
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~---------- 213 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--------IQIYEKILEG---------- 213 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcC----------
Confidence 2334688999999999888899999999999999999999999854321 1111111111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
. ...+......+.+++.+||+.+|.+|| +++|++.+
T Consensus 214 ---~--~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 214 ---K--VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred ---C--ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 0 112223346788999999999999999 77777654
No 285
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.6e-32 Score=288.36 Aligned_cols=247 Identities=29% Similarity=0.485 Sum_probs=202.8
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
++|++.+.||+|++|.||+|... ++.+++|++... ..+.+.+|++.+.+++|+|++++++++.. ...+++|||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 46888999999999999999886 789999998754 35679999999999999999999998875 468999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
+++++|.+++... ..+++..+++++.++++||+|||+ .++ +|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~---~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHI---IHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCC---ccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999865 458999999999999999999999 998 9999999999999999999999999986643222
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
. .....++..|+|||.+....++.++|+||||+++|||++|+.||..... .........+....
T Consensus 156 ~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~---------- 219 (264)
T cd06623 156 Q-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ-----PSFFELMQAICDGP---------- 219 (264)
T ss_pred c-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc-----cCHHHHHHHHhcCC----------
Confidence 1 1234678899999999988999999999999999999999999865432 01122222222111
Q ss_pred CCcCCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 722 DPRLGDDYPID-SVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 722 d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....+.. .+..+.+++.+||+.+|++||++.|++++
T Consensus 220 ----~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 220 ----PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ----CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0111222 45679999999999999999999999875
No 286
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.3e-32 Score=290.55 Aligned_cols=247 Identities=22% Similarity=0.421 Sum_probs=183.9
Q ss_pred eeeeecCceEEEEEEEC-C---ceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecCC
Q 046083 496 NKIGQGGFGAVFYAELR-G---EKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~-g---~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~g 566 (790)
+.||+|+||.||++... + ..+++|.++. ...+.+.+|+.+++.++||||+++++++.+. ..++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 36999999999999754 2 3466776653 2346789999999999999999999998754 489999999999
Q ss_pred ChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC-ccc
Q 046083 567 NLNQHLRGSG--KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS-ASV 643 (790)
Q Consensus 567 ~L~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~-~~~ 643 (790)
+|.++++... ...+++..+..++.|+++||+|||+.++ +||||||+|||++.++.+||+|||++....... ...
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i---~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF---LHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe---eccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 9999997642 2346777888999999999999999997 999999999999999999999999986432111 111
Q ss_pred ccccccCCCccchhcccC-------CCCCchhhHHHHHHHHHHHHhC-CccccccccccccccchHHHHHHHHcCCCChh
Q 046083 644 HTRLVGTFGYMPPEYAQY-------GEVSPKIDVYAFGVVLYELISA-MEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~-------~~~s~~sDvwS~Gvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
.....++..|+|||++.. ..++.++||||||+++|||+++ ..||..... ......++....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~--------~~~~~~~~~~~~--- 226 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD--------REVLNHVIKDQQ--- 226 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHhhcc---
Confidence 223567889999998753 2457899999999999999974 556643211 112222222111
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..+.++.+.. .....+.+++..|| .+|++||++++|++.|.
T Consensus 227 --~~~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 227 --VKLFKPQLEL----PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred --cccCCCccCC----CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1122233222 23356788999999 67999999999998874
No 287
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=9.9e-33 Score=293.42 Aligned_cols=247 Identities=24% Similarity=0.409 Sum_probs=189.5
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHH-HHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKV-LTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~-l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
++|++.+.||+|+||.||++... ++.+|+|+++.. ...++..|+.. ++..+|||++++++++.. +..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 47899999999999999999986 889999988642 23345566665 566689999999998874 56899999
Q ss_pred EecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 562 YIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEH-TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 562 ~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
|++ |+|.+++... ....+++..++.++.|++.||+|||++ ++ +||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i---~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSV---IHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCe---ecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 997 5888887642 234689999999999999999999997 76 9999999999999999999999999986532
Q ss_pred CCcccccccccCCCccchhcccC----CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQY----GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~----~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
.. ......++..|+|||.+.+ ..++.++|+||||+++|||++|+.||...... . ..........
T Consensus 157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~-~~~~~~~~~~--- 224 (283)
T cd06617 157 SV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP------F-QQLKQVVEEP--- 224 (283)
T ss_pred cc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC------H-HHHHHHHhcC---
Confidence 11 1223457889999998864 45688999999999999999999998542211 0 0111111110
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
.+.+. ....+..+.+++.+||+.+|.+||++++++++-
T Consensus 225 -------~~~~~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 262 (283)
T cd06617 225 -------SPQLP---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHP 262 (283)
T ss_pred -------CCCCC---ccccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 01110 112346789999999999999999999998743
No 288
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.9e-33 Score=304.09 Aligned_cols=257 Identities=23% Similarity=0.371 Sum_probs=194.1
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-------
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE------- 553 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~------- 553 (790)
..++|.+.+.||+|+||.||+|... ++.+|||++... ..+.+.+|++++++++||||+++++++..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 4578999999999999999999875 778999998642 23557789999999999999999987642
Q ss_pred CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 554 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
...++++|++ +++|.+++.. ..+++..+..++.|++.||.|||++++ +||||||+|||+++++.+||+|||++
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~i---vHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAGI---IHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCe---ecccCChhhEEECCCCCEEEcCCccc
Confidence 2368999988 6799888764 358999999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
+..... .....|++.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..............
T Consensus 166 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~~~~~ 236 (343)
T cd07878 166 RQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-----DQLKRIMEVVGTPS 236 (343)
T ss_pred eecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHHHhCCCC
Confidence 865422 233568999999999876 56899999999999999999999998543211 00011111111110
Q ss_pred Chhhh--------hhhcCCcCCCCCC--------HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 713 PREDL--------QRLVDPRLGDDYP--------IDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 713 ~~~~l--------~~~~d~~l~~~~~--------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.+.+ ...+. .+. ..+ ......+.+++.+|++.||.+|||+.|++++-+
T Consensus 237 -~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~ 300 (343)
T cd07878 237 -PEVLKKISSEHARKYIQ-SLP-HMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY 300 (343)
T ss_pred -HHHHHhcchhhHHHHhh-ccc-cccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 0000 00000 000 000 012235789999999999999999999998644
No 289
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.2e-32 Score=291.81 Aligned_cols=245 Identities=26% Similarity=0.458 Sum_probs=195.3
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcC---CCCCcceEEEEecC-eEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVH---HLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~---h~niv~l~g~~~~~-~~~lv~ 560 (790)
.|+..+.||+|+||.||+|... +..+++|.++. ...+++.+|++++++++ |||++++++++.++ ..+++|
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 4777899999999999999975 78999998753 33466888999999996 99999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++++|.++++.. .+++...+.++.+++.||.|||+.++ +|+||+|+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i---~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGV---IHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998753 58999999999999999999999998 999999999999999999999999998664433
Q ss_pred cccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
. ......|+..|+|||.+..+ .++.++|+||||+++|+|++|..||...... ...... ..
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--------~~~~~~----------~~ 216 (277)
T cd06917 156 S-KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF--------RAMMLI----------PK 216 (277)
T ss_pred c-ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh--------hhhhcc----------cc
Confidence 2 12334688899999998754 4689999999999999999999998543211 000000 00
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
...+.+... .....+.+++.+||+.||++||++.|++.+-+
T Consensus 217 ~~~~~~~~~---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~ 257 (277)
T cd06917 217 SKPPRLEDN---GYSKLLREFVAACLDEEPKERLSAEELLKSKW 257 (277)
T ss_pred CCCCCCCcc---cCCHHHHHHHHHHcCCCcccCcCHHHHhhChH
Confidence 011111111 13457889999999999999999999987543
No 290
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-32 Score=293.90 Aligned_cols=249 Identities=22% Similarity=0.446 Sum_probs=196.7
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~ 562 (790)
++|++.+.||+|+||.||++... +..+|+|.+.. .....+.+|++++++++|+||+++++++. ++..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 46888999999999999999986 88999998753 22457889999999999999999999776 4568999999
Q ss_pred ecCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 563 IENGNLNQHLRGSG-KDTLTWSARMQIALDSARGLEYIHEH-TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 563 ~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
+++++|.+++.... ...+++..+..++.+++.||.|||+. ++ +|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i---~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNI---IHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCE---eeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999987632 23689999999999999999999974 66 99999999999999999999999998755322
Q ss_pred cccccccccCCCccchhcccCCC------CCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGE------VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~------~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
......++..|+|||.+.+.. ++.++|+|||||++|||++|+.||...... .......
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~--------- 220 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA-----NIFAQLS--------- 220 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-----hHHHHHH---------
Confidence 122345788999999985543 588999999999999999999998542210 1111111
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
...+.. ....+......+.+++.+||+.+|++||++++++.+-+
T Consensus 221 ----~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 221 ----AIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred ----HHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 111111 11223345667889999999999999999999998654
No 291
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.1e-33 Score=305.91 Aligned_cols=236 Identities=22% Similarity=0.345 Sum_probs=183.0
Q ss_pred eeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHHhc---CCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLTHV---HHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~~l---~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
||+|+||.||+|+.. ++.+|+|++.... ...+..|..++... +||||+++++++.+ ...|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999876 7899999986422 22345566777665 69999999998774 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.+++...+ .+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~i---vHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDI---VYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTN 154 (330)
T ss_pred ChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---EeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCcc
Confidence 99999987643 58999999999999999999999998 999999999999999999999999987532221 1223
Q ss_pred ccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 646 RLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
...||+.|+|||.+.+. .++.++|||||||++|||++|+.||..... ......+.... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~-----------~~ 215 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT--------QQMYRNIAFGK-----------VR 215 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH--------HHHHHHHHcCC-----------CC
Confidence 45789999999998754 479999999999999999999999854321 11112211110 00
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCC----CHHHHHHH
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRP----SMRAIVVA 761 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RP----t~~evl~~ 761 (790)
+.. ......+.+++.+||+.||.+|| ++.+++++
T Consensus 216 ~~~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 216 FPK---NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred CCC---ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 100 11345678999999999999998 56666654
No 292
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2e-32 Score=295.14 Aligned_cols=244 Identities=30% Similarity=0.456 Sum_probs=193.5
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
+.|...+.||+|+||.||+|... ++.+++|.+.. +..+++.+|+++++.++|||++++++++.+ ...++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45788899999999999999875 78999998752 223568899999999999999999999875 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+. |+|.+++.... ..+++..+..++.|++.||.|||+.++ +|+||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~i---~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 95 EYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHER---IHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 9997 57777776433 358999999999999999999999998 99999999999999999999999998765322
Q ss_pred cccccccccCCCccchhccc---CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQ---YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
....++..|+|||.+. ...++.++||||||+++|||++|..||...... ...........
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~--------~~~~~~~~~~~----- 231 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNDS----- 231 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH--------HHHHHHhcCCC-----
Confidence 2345788999999874 456889999999999999999999998543221 00111111000
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
+.+ .+......+.+++.+||+.+|++||++.+|+.+.+.
T Consensus 232 -----~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 270 (307)
T cd06607 232 -----PTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFV 270 (307)
T ss_pred -----CCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 011 112345678999999999999999999999986553
No 293
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.1e-33 Score=296.65 Aligned_cols=261 Identities=27% Similarity=0.378 Sum_probs=193.0
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|++.+.||+|+||.||+|... |+.+++|.++.. ....+.+|++++++++|+|++++++++.+ ...++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999985 889999988642 22457889999999999999999998764 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++ +|.+++.... ..+++..++.++.|+++||.|||+.++ +|+||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~-~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~i---~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~ 155 (284)
T cd07839 81 CDQ-DLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHNV---LHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC 155 (284)
T ss_pred CCC-CHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCE---ecCCCCHHHEEEcCCCcEEECccchhhccCCCCCC
Confidence 975 8888876543 358999999999999999999999997 99999999999999999999999999865432221
Q ss_pred cccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh--hhhhh
Q 046083 643 VHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR--EDLQR 719 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~ 719 (790)
.....++..|+|||.+.+. .++.++|||||||++|||++|..|+....... ................ ..+..
T Consensus 156 -~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07839 156 -YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD----DQLKRIFRLLGTPTEESWPGVSK 230 (284)
T ss_pred -cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH----HHHHHHHHHhCCCChHHhHHhhh
Confidence 2234568899999998764 47899999999999999999998865432210 0000011111110000 00001
Q ss_pred hcCCc----CCC-----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 720 LVDPR----LGD-----DYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 720 ~~d~~----l~~-----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..+.. ... ........++.+++.+||+.||.+|||++|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 231 LPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred cccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 11100 000 0111244678899999999999999999999864
No 294
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=4.7e-33 Score=297.74 Aligned_cols=245 Identities=24% Similarity=0.416 Sum_probs=194.1
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
|.....||+|+||.||++... +..+|||.+.. ...+.+.+|+.+++.++|+|++++++.+.. +..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 334567999999999999875 78999998864 334568899999999999999999988764 458999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|.+++... .+++..+..++.+++.||+|||++++ +||||||+||++++++.++|+|||++........ ...
T Consensus 104 ~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~i---vH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~ 176 (292)
T cd06658 104 GALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGV---IHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-KRK 176 (292)
T ss_pred CcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCE---eecCCCHHHEEEcCCCCEEEccCcchhhcccccc-cCc
Confidence 9999988642 48899999999999999999999997 9999999999999999999999999875432221 122
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|+..|+|||.+.+..++.++||||||+++|||++|..||...... .....+ ...+.+.+
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~----------~~~~~~~~ 238 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--------QAMRRI----------RDNLPPRV 238 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH----------HhcCCCcc
Confidence 356889999999998888999999999999999999999998643210 111111 11111111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.. .......+.+++.+||+.||.+|||++|++++-.
T Consensus 239 ~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~ 274 (292)
T cd06658 239 KD--SHKVSSVLRGFLDLMLVREPSQRATAQELLQHPF 274 (292)
T ss_pred cc--ccccCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence 11 1123456889999999999999999999998643
No 295
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.2e-32 Score=293.01 Aligned_cols=260 Identities=26% Similarity=0.428 Sum_probs=194.5
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~ 562 (790)
+|+..+.||.|+||.||+|... +..++||.++.. ....+.+|++++++++||||+++++++.++ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 5788999999999999999875 789999988642 224688999999999999999999988754 58999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+. ++|.+++.......+++..+..++.+++.||+|||+.++ +|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i---~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRV---LHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence 96 589999877655678999999999999999999999997 9999999999999999999999999876543221
Q ss_pred cccccccCCCccchhcccCCC-CCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC--------
Q 046083 643 VHTRLVGTFGYMPPEYAQYGE-VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP-------- 713 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~-~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 713 (790)
......++..|+|||.+.+.. ++.++||||||+++|||+||+.||...... ........ ....+..
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~ 230 (284)
T cd07860 156 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI----DQLFRIFR-TLGTPDEVVWPGVTS 230 (284)
T ss_pred ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHHH-HhCCCChhhhhhhhH
Confidence 122235678999999887644 588999999999999999999998643221 11111111 1100000
Q ss_pred ----hhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 714 ----REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 714 ----~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...+.......+. .........+.+++.+||+.||++|||++|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 231 LPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000000000000 0011233567899999999999999999999864
No 296
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.3e-32 Score=294.60 Aligned_cols=246 Identities=23% Similarity=0.394 Sum_probs=197.5
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
++|.+.+.||+|+||.||++... +..+++|.+.. ...+.+.+|+.++++++|||++++++++.. ...++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888999999999999999864 77899998863 234568899999999999999999998875 4589999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++++|.+++... .+++..+..++.+++.||.|||++++ +|+||+|+||+++.++.++|+|||++........ .
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~gi---~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~ 171 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQV---IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-K 171 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCE---eeccCCHHHEEEcCCCCEEEccCcceeccccccc-c
Confidence 999999999753 47899999999999999999999997 9999999999999999999999999875543222 1
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
.....+++.|++||.+....++.++|+||||+++|||++|+.||....... . ....... +
T Consensus 172 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~----~----~~~~~~~------------~ 231 (293)
T cd06647 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR----A----LYLIATN------------G 231 (293)
T ss_pred cccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh----h----eeehhcC------------C
Confidence 223467889999999988889999999999999999999999996432210 0 0000000 0
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
......+......+.+++.+||+.+|.+||++++++.+-
T Consensus 232 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 232 TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 000111223445788999999999999999999999764
No 297
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1e-32 Score=294.82 Aligned_cols=261 Identities=26% Similarity=0.410 Sum_probs=193.7
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh----HHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA----SKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~----~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~ 562 (790)
++|+..+.||+|++|.||+|... ++.+|+|.+.... ...+.+|++++++++|+||+++++++.+. ..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67899999999999999999875 7899999986422 24567899999999999999999988754 58999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+.+ +|.+++..... .+++.....++.|++.||.|||+.++ +|+||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~-~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~~~i---~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~- 158 (291)
T cd07844 85 LDT-DLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQRRV---LHRDLKPQNLLISERGELKLADFGLARAKSVPSK- 158 (291)
T ss_pred CCC-CHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCe---ecccCCHHHEEEcCCCCEEECccccccccCCCCc-
Confidence 985 99998876543 68999999999999999999999998 9999999999999999999999999875432211
Q ss_pred cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 643 VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..........+..+.. +.+....
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~ 233 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV----EDQLHKIFRVLGTPTE-ETWPGVS 233 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH----HHHHHHHHHhcCCCCh-hhhhhhh
Confidence 1122346789999999875 45889999999999999999999998543311 0011111111111100 0000000
Q ss_pred --------------CCcCCCCC-CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 722 --------------DPRLGDDY-PIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 722 --------------d~~l~~~~-~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...+.... .......+.+++.+||+.+|++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00000000 01112567899999999999999999998753
No 298
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.5e-32 Score=292.83 Aligned_cols=251 Identities=25% Similarity=0.427 Sum_probs=202.4
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh--HHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA--SKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEY 562 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~--~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~ 562 (790)
.++.|+..+.||+|+||.||++... +..+++|.+.... .+.+.+|++++++++|+|++++++++. +...++++||
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 96 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEY 96 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEec
Confidence 4567888899999999999999987 7899999987544 567889999999999999999999876 4568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++.... ..+++..+..++.+++.||.|||+.++ +|+||+|+||+++.++.++|+|||++........
T Consensus 97 ~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi---~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 171 (286)
T cd06614 97 MDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNV---IHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS- 171 (286)
T ss_pred cCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCChhhEEEcCCCCEEECccchhhhhccchh-
Confidence 99999999998754 369999999999999999999999998 9999999999999999999999999875432221
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
......++..|++||.+.+..++.++|+||||+++|+|++|+.|+...... ...........
T Consensus 172 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--------~~~~~~~~~~~---------- 233 (286)
T cd06614 172 KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--------RALFLITTKGI---------- 233 (286)
T ss_pred hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhcCC----------
Confidence 122345788999999998888999999999999999999999998542211 11111111100
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+. ...+...+..+.+++.+||+.+|.+||++.+++++..
T Consensus 234 ~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 234 PP--LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred CC--CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 00 0111224567889999999999999999999987544
No 299
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.6e-32 Score=287.33 Aligned_cols=245 Identities=22% Similarity=0.363 Sum_probs=196.6
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--------hhHHHHHHHHHHHHhcCCCCCcceEEEEec---CeE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--------QASKEFLAELKVLTHVHHLNLVRLIGYCVE---GSL 556 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~ 556 (790)
.+|++.+.||+|+||.||+|... +..+++|.+.. ...+.+.+|++++++++|+||+++++++.+ ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 57899999999999999999875 78999998642 233568899999999999999999998864 347
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
++++||+++++|.+++...+ .+++....+++.+++.||.|||+.++ +|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i---~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMI---VHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 89999999999999997643 47899999999999999999999997 99999999999999999999999999865
Q ss_pred ccCCc--ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 637 EVGSA--SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 637 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
..... .......++..|+|||++.+..++.++|+|||||+++||++|+.||..... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--------~~~~~~~------- 221 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA--------MAAIFKI------- 221 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH--------HHHHHHH-------
Confidence 32111 111235688999999999988899999999999999999999999854321 0111111
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.........+......+.+++.+||+ +|..||+..+++.+
T Consensus 222 ------~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 222 ------ATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ------HcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 11111223344556779999999999 57999999988753
No 300
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.4e-32 Score=291.96 Aligned_cols=263 Identities=25% Similarity=0.361 Sum_probs=192.6
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
++++|.+.+.||+|+||.||+|... ++.+++|.+... ....+.+|+++++.++|+||+++++++.++ ..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999875 889999998632 224578899999999999999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+. ++|.+++.... ..+.+..+..++.|++.||.|||++++ +|+||||+|||++.++.+||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i---~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQHI---LHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9996 67777765432 357888899999999999999999998 999999999999999999999999997543222
Q ss_pred cccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh----
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE---- 715 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 715 (790)
.. .....+++.|+|||.+.+. .++.++||||||+++|||++|..||....... ..+.. ....+..+....
T Consensus 158 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~ 232 (291)
T cd07870 158 QT-YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVF---EQLEK-IWTVLGVPTEDTWPGV 232 (291)
T ss_pred CC-CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHH---HHHHH-HHHHcCCCChhhhhhh
Confidence 11 1234568899999998754 57899999999999999999999986543210 00100 001111000000
Q ss_pred -hh----hhhcCCcCCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 716 -DL----QRLVDPRLGDDY-----PIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 716 -~l----~~~~d~~l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
.+ ..+......... .......+.+++.+|++.||++|||++|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 233 SKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00 000000000000 0012356789999999999999999999875
No 301
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1e-32 Score=293.35 Aligned_cols=259 Identities=27% Similarity=0.427 Sum_probs=194.4
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~ 563 (790)
|+..+.||.|++|.||+|... |..+++|++... ..+.+.+|++++++++|+|++++++++.++ ..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567899999999999999875 889999988642 235688999999999999999999988754 589999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
+ ++|.+++.......+++..++.++.++++||+|||++++ +|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~---~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~- 155 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV---LHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT- 155 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eCCCCCHHHEEEcCCCcEEEeecccccccCCCccc-
Confidence 5 699999876554568999999999999999999999987 99999999999999999999999999765432211
Q ss_pred ccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh--------
Q 046083 644 HTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR-------- 714 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 714 (790)
.....++..|+|||++.+. .++.++|+||||+++|||++|+.||...... ......... ...+...
T Consensus 156 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~ 230 (283)
T cd07835 156 YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI----DQLFRIFRT-LGTPDEDVWPGVTSL 230 (283)
T ss_pred cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHHH-hCCCChHHhhhhhhc
Confidence 1223468899999988654 5789999999999999999999998653321 001111111 0000000
Q ss_pred hhhh----hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 715 EDLQ----RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 715 ~~l~----~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.... ....... ..........+.+++.+||+.+|++|||++|++++
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 231 PDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 0000000 01112334678899999999999999999999864
No 302
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=4.3e-32 Score=293.87 Aligned_cols=250 Identities=28% Similarity=0.441 Sum_probs=197.4
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEY 562 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~ 562 (790)
|...+.||+|+||.||++... +..+++|.+.. +..+.+.+|++++++++|+|++++++++.++ ..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666789999999999999875 78899998852 2235688899999999999999999988754 58999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+.+ +|.+++... ...+++..+..++.+++.||.|||++++ +|+||+|+||+++.++.+||+|||++......
T Consensus 107 ~~g-~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i---~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 107 CLG-SASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNM---IHRDIKAGNILLTEPGQVKLADFGSASIASPA--- 178 (317)
T ss_pred CCC-CHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence 975 788777543 2358999999999999999999999998 99999999999999999999999998754321
Q ss_pred cccccccCCCccchhccc---CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 643 VHTRLVGTFGYMPPEYAQ---YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
....++..|+|||++. .+.++.++|||||||++|||++|..||...... .....+...
T Consensus 179 --~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~--------- 239 (317)
T cd06635 179 --NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQN--------- 239 (317)
T ss_pred --ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH--------HHHHHHHhc---------
Confidence 2345788999999973 457899999999999999999999998543211 111111111
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccC
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDW 772 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~ 772 (790)
.............+.+++.+||+.+|.+||++.++++++..+......+
T Consensus 240 ----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~ 288 (317)
T cd06635 240 ----ESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPETV 288 (317)
T ss_pred ----cCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcccc
Confidence 0001111234456889999999999999999999999887766655554
No 303
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.1e-32 Score=295.71 Aligned_cols=243 Identities=23% Similarity=0.388 Sum_probs=193.3
Q ss_pred cceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCC
Q 046083 494 MGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGN 567 (790)
Q Consensus 494 ~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~ 567 (790)
....||+|+||.||++... +..+++|.++. ...+.+.+|+.++..++|||++++++++.. ...+++|||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 3457999999999999875 78999999853 234568899999999999999999998764 56899999999999
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccccc
Q 046083 568 LNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRL 647 (790)
Q Consensus 568 L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 647 (790)
|.+++.. ..+++..++.++.|++.||+|||+.++ +|+||+|+||+++.++.+||+|||++........ .....
T Consensus 105 L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~i---vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~-~~~~~ 177 (297)
T cd06659 105 LTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGV---IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP-KRKSL 177 (297)
T ss_pred HHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHeEEccCCcEEEeechhHhhcccccc-cccce
Confidence 9998864 348999999999999999999999997 9999999999999999999999999875432221 12235
Q ss_pred ccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCC
Q 046083 648 VGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGD 727 (790)
Q Consensus 648 ~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~ 727 (790)
.++..|+|||++.+..++.++||||||+++|||++|..||...... .....+..... +..
T Consensus 178 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~~----------~~~-- 237 (297)
T cd06659 178 VGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--------QAMKRLRDSPP----------PKL-- 237 (297)
T ss_pred ecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhccCC----------CCc--
Confidence 6889999999999889999999999999999999999998643221 11111111000 000
Q ss_pred CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 728 DYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 728 ~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.........+.+++.+||+.+|.+||++++++++-.
T Consensus 238 ~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~ 273 (297)
T cd06659 238 KNAHKISPVLRDFLERMLTREPQERATAQELLDHPF 273 (297)
T ss_pred cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChh
Confidence 011123456889999999999999999999998643
No 304
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.5e-32 Score=285.47 Aligned_cols=243 Identities=26% Similarity=0.438 Sum_probs=198.4
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|++.+.||+|+||.||++... ++.+++|.+.. ....++.+|++++++++|+||+++++++.+ ...++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 5788999999999999999875 77899998864 234567889999999999999999987764 568999999
Q ss_pred ecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 563 IENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 563 ~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
+++++|.+++... ....+++..++.++.+++.||+|||+.++ +|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i---~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKI---LHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCc---ccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998762 22468999999999999999999999998 99999999999999999999999999876543
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
......++..|++||.+.+..++.++|+||||+++|||++|+.||..... .........
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~----------- 215 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM--------QDLRYKVQR----------- 215 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhc-----------
Confidence 12234578899999999998999999999999999999999999854321 111111111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
......+.....++.+++.+|++.+|++||++.+++++
T Consensus 216 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 216 ---GKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred ---CCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11112233456779999999999999999999999864
No 305
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.1e-32 Score=282.92 Aligned_cols=246 Identities=26% Similarity=0.437 Sum_probs=202.1
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChhh-----HHHHHHHHHHHHhcCCCCCcceEEEEecC---eEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA-----SKEFLAELKVLTHVHHLNLVRLIGYCVEG---SLFLVY 560 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~g~~~~~---~~~lv~ 560 (790)
+|+..+.||+|++|.||+|... +..+++|.+.... .+.+.+|++++++++|+|++++++++.+. ..++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999986 8899999886543 56789999999999999999999988754 589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++++|.+++.... .+++..++.++.+++.||+|||+.++ +|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~---~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGI---VHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCc---cccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999998654 69999999999999999999999998 999999999999999999999999998665432
Q ss_pred cc-cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 641 AS-VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 641 ~~-~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
.. ......++..|++||.+.....+.++||||||+++++|++|..||...... .... ..
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~-------------~~ 215 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-------MAAL-------------YK 215 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------HHHH-------------Hh
Confidence 21 122356788999999999888999999999999999999999998654310 0101 11
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..........+......+.+++.+|++.+|.+||++.+++.+
T Consensus 216 ~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 216 IGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 111111122344446789999999999999999999999864
No 306
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.1e-32 Score=292.74 Aligned_cols=261 Identities=25% Similarity=0.385 Sum_probs=195.6
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh-----HHHHHHHHHHHHhcCCCCCcceEEEEec---CeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA-----SKEFLAELKVLTHVHHLNLVRLIGYCVE---GSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~g~~~~---~~~~lv 559 (790)
++|+..+.||+|+||.||+|... +..+++|.++... ...+.+|++++++++||||+++++++.. ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888999999999999999986 7789999886322 2346789999999999999999998764 458999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+.+ +|.+++.... ..+++..++.++.|++.||+|||+.++ +|+||||+||+++.++.+||+|||++......
T Consensus 85 ~e~~~~-~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i---~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVEH-DLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWI---LHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcCc-CHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 999975 9999887643 368999999999999999999999997 99999999999999999999999999865433
Q ss_pred CcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC-----
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP----- 713 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 713 (790)
.. ......+++.|+|||.+.+. .++.++|+||||+++|||++|..||....... ...... .....+..
T Consensus 160 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~----~~~~~~-~~~~~~~~~~~~~ 233 (293)
T cd07843 160 LK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID----QLNKIF-KLLGTPTEKIWPG 233 (293)
T ss_pred cc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH----HHHHHH-HHhCCCchHHHHH
Confidence 21 12234578899999998754 46899999999999999999999986433210 011111 00000000
Q ss_pred -------h-hhhhhhcCCcCCCCCCHH-HHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 714 -------R-EDLQRLVDPRLGDDYPID-SVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 714 -------~-~~l~~~~d~~l~~~~~~~-~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
. ..+.......+...++.. ....+.+++.+||+.+|++|||++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred hhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 000000111111122222 35678899999999999999999999863
No 307
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-33 Score=302.63 Aligned_cols=239 Identities=25% Similarity=0.419 Sum_probs=198.0
Q ss_pred eeeecCceEEEEEEEC--CceEEEEEeChhhH---HHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecCCChhh
Q 046083 497 KIGQGGFGAVFYAELR--GEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLNQ 570 (790)
Q Consensus 497 ~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~---~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~g~L~~ 570 (790)
.||+|.||+||-|++. ...+|||.+..... +-+..|+.+.++++|.|||+.+|.+.++ .+-+.||.++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 7899999999999987 45679998875433 4488999999999999999999998765 4678899999999999
Q ss_pred hhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEec-CCCcEEEEEeCCCcccccCCccccccc
Q 046083 571 HLRGSGKDTL--TWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILID-KNFRAKVADFGLAKLTEVGSASVHTRL 647 (790)
Q Consensus 571 ~l~~~~~~~l--~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~ 647 (790)
+|+..= .++ .+.+.-.+.+||++||.|||++.| ||||||-+|+|++ -.|.+||+|||-++.+.. -......+
T Consensus 662 LLrskW-GPlKDNEstm~fYtkQILeGLkYLHen~I---VHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TETF 736 (1226)
T KOG4279|consen 662 LLRSKW-GPLKDNESTMNFYTKQILEGLKYLHENKI---VHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTETF 736 (1226)
T ss_pred HHHhcc-CCCccchhHHHHHHHHHHHHhhhhhhcce---eeccccCCcEEEeeccceEEecccccchhhcc-CCcccccc
Confidence 998642 234 778888999999999999999998 9999999999996 478999999999987642 33345567
Q ss_pred ccCCCccchhcccCC--CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 648 VGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 648 ~gt~~y~aPE~~~~~--~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
.||.-|||||++..+ .|..++|||||||.+.||.||++||...+.. ....|..-+ -+.
T Consensus 737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp------qAAMFkVGm--------------yKv 796 (1226)
T KOG4279|consen 737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP------QAAMFKVGM--------------YKV 796 (1226)
T ss_pred ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh------hHhhhhhcc--------------eec
Confidence 899999999999876 5889999999999999999999999765542 111111111 123
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
++.+|.+...+...++.+|+.+||.+||++.++++
T Consensus 797 HP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 797 HPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 45678888999999999999999999999999986
No 308
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.8e-32 Score=286.63 Aligned_cols=239 Identities=24% Similarity=0.394 Sum_probs=193.7
Q ss_pred eeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecCCCh
Q 046083 498 IGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNL 568 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~g~L 568 (790)
||.|+||.||++... +..+++|.+.. ...+.+.+|+.+++.++||||+++++++.++ ..+++|||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999987 88999998853 2335688999999999999999999987754 58999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 648 (790)
.+++.... .+++..+..++.+++.||+|||++++ +|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~---~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~ 153 (262)
T cd05572 81 WTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGI---IYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFC 153 (262)
T ss_pred HHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCc---ccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--cccccc
Confidence 99998643 48999999999999999999999998 999999999999999999999999998664332 222346
Q ss_pred cCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCC
Q 046083 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDD 728 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~ 728 (790)
++..|++||.+....++.++|+||||+++|||++|..||...... ...... ...+......
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~-------------~~~~~~~~~~ 214 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED------PMEIYN-------------DILKGNGKLE 214 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC------HHHHHH-------------HHhccCCCCC
Confidence 788999999998888999999999999999999999998654321 111111 1121111223
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCC-----HHHHHHHH
Q 046083 729 YPIDSVRKMARLARACTQENPQLRPS-----MRAIVVAL 762 (790)
Q Consensus 729 ~~~~~~~~l~~li~~Cl~~dP~~RPt-----~~evl~~L 762 (790)
++......+.+++.+||+.+|++||+ ++|++++-
T Consensus 215 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~ 253 (262)
T cd05572 215 FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHK 253 (262)
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcCh
Confidence 33344568999999999999999999 67776643
No 309
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.6e-32 Score=299.73 Aligned_cols=260 Identities=27% Similarity=0.417 Sum_probs=196.2
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC------eE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG------SL 556 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~ 556 (790)
+++|++.+.||+|+||.||+|... ++.||+|.++. .....+.+|+.++++++|+||+++++++... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 478999999999999999999875 78999999863 2335678899999999999999999886532 37
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
++++||+.+ +|.+++.. ..+++..+..++.|++.||+|||+.++ +||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~-~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~i---vH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELMET-DLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANV---LHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhccc-CHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHEEECCCCCEEECcccceeec
Confidence 999999975 88887764 358999999999999999999999998 99999999999999999999999999865
Q ss_pred ccCCcc--cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC
Q 046083 637 EVGSAS--VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 637 ~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
...... ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ..........+..+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~-----~~~~~~~~~~~~~~~- 230 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY-----LHQLNLILGVLGTPS- 230 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHcCCCC-
Confidence 432211 1123567899999998754 5689999999999999999999999854321 111111111222111
Q ss_pred hhhhhhhcCCcC---------CCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 714 REDLQRLVDPRL---------GDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 714 ~~~l~~~~d~~l---------~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.+.+..+.+... ....+ .....++.+++.+||+.+|++|||+.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 122221111100 00000 1234568899999999999999999999987
No 310
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.7e-32 Score=289.79 Aligned_cols=243 Identities=23% Similarity=0.395 Sum_probs=194.1
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecC
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIEN 565 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~ 565 (790)
|...+.||+|++|.||++... +..+++|+++. ...+.+.+|+.+++.++|+|++++++++.. ...++++||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 445679999999999999875 78899998853 234568899999999999999999998764 568999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|.+++.. ..+++..+..++.+++.||+|||++++ +||||+|+||+++.++.++|+|||++........ ...
T Consensus 101 ~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i---~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~-~~~ 173 (285)
T cd06648 101 GALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGV---IHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP-RRK 173 (285)
T ss_pred CCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCChhhEEEcCCCcEEEcccccchhhccCCc-ccc
Confidence 999999986 258999999999999999999999998 9999999999999999999999998875432221 122
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...|+..|+|||.+.+..++.++||||||+++|||++|+.||..... ........... .+..
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--------~~~~~~~~~~~----------~~~~ 235 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--------LQAMKRIRDNL----------PPKL 235 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHhcC----------CCCC
Confidence 34688999999999888899999999999999999999999854321 11111111110 0111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
. .+......+.+++.+||+.+|++||++.+++++
T Consensus 236 ~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 236 K--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred c--ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 0 111244578999999999999999999999864
No 311
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.5e-32 Score=282.11 Aligned_cols=245 Identities=29% Similarity=0.502 Sum_probs=198.8
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh---hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEec
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ---ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIE 564 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~---~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~ 564 (790)
+|+..+.||+|++|.||++... +..+++|++... ..+.+.+|++++++++|+|++++++++.. ...++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999986 788999998754 44678999999999999999999998874 46899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+++|.+++.... ..+++..+..++.+++.||.|||+.++ +|+||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i---~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~ 154 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGI---IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--R 154 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCE---ecCCCCHHHEEEccCCeEEEeecccccccccccc--c
Confidence 999999998653 468999999999999999999999987 9999999999999999999999999986654322 2
Q ss_pred cccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCc
Q 046083 645 TRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPR 724 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~ 724 (790)
....++..|++||.+....++.++|+||||+++++|++|+.||...... .......... .+.
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~----------~~~ 216 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--------KALFKIATNG----------PPG 216 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--------HHHHHHHhcC----------CCC
Confidence 3456788999999999888999999999999999999999998643210 0011111000 000
Q ss_pred CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 725 LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 725 l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+. .+......+.+++.+||+.||++|||+.|++++
T Consensus 217 ~~--~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 217 LR--NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cC--cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 10 011124678999999999999999999999864
No 312
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.6e-32 Score=292.73 Aligned_cols=250 Identities=24% Similarity=0.408 Sum_probs=191.3
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcC-CCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVH-HLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|...+.||+|+||.||++... +..+|+|.+.. .....+.+|+.++.++. |+||+++++++.. +..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4566789999999999999885 78999998864 23456889999999996 9999999998764 458999999
Q ss_pred ecCCChhhh---hhcCCCCCCCHHHHHHHHHHHHHHHHHHHhC-CCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 563 IENGNLNQH---LRGSGKDTLTWSARMQIALDSARGLEYIHEH-TVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 563 ~~~g~L~~~---l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~-~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
+.. +|.++ +.......+++..+.+++.+++.||+|||+. ++ +||||||+||+++.++.+||+|||+++....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i---~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKI---IHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCe---eccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 865 55443 3333335689999999999999999999975 76 9999999999999999999999999975432
Q ss_pred CCcccccccccCCCccchhcccCC---CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYG---EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~---~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
.. ......|+..|+|||.+... .++.++|||||||++|||++|+.||..... ............
T Consensus 161 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~---- 227 (288)
T cd06616 161 SI--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-------VFDQLTQVVKGD---- 227 (288)
T ss_pred CC--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-------HHHHHhhhcCCC----
Confidence 21 11234578899999999766 689999999999999999999999854321 111111111110
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.+.+....+...+..+.+++.+||+.+|++|||+++|+.+-.
T Consensus 228 ------~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~ 269 (288)
T cd06616 228 ------PPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPF 269 (288)
T ss_pred ------CCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 112222222345567899999999999999999999988643
No 313
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.3e-32 Score=288.49 Aligned_cols=242 Identities=26% Similarity=0.369 Sum_probs=197.5
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
+|++.+.||.|+||.||++... +..+++|.+.. ...+.+.+|++++++++||||+++++++.+ ...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5888999999999999999986 88999998864 234678999999999999999999988765 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+.+++|.+++... ..+++..+..++.++++||.|||++++ +|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i---~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGI---IHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999765 368999999999999999999999997 999999999999999999999999988654322
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
......|+..|+|||.+....++.++|+||||+++|+|++|..||...... ....+......
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~----------- 216 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------IRDQIRAKQET----------- 216 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------HHHHHHHHhcc-----------
Confidence 223356788999999999888999999999999999999999998654321 01111111110
Q ss_pred CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCH--HHHH
Q 046083 722 DPRLGDDYPIDSVRKMARLARACTQENPQLRPSM--RAIV 759 (790)
Q Consensus 722 d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~--~evl 759 (790)
.....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 217 ---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 ---ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ---ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 1112233445788999999999999999999 6654
No 314
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.3e-32 Score=297.75 Aligned_cols=266 Identities=22% Similarity=0.296 Sum_probs=197.4
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-------
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE------- 553 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------- 553 (790)
..++|+..+.||+|+||.||+|... ++.+|+|.+.. ...+++.+|+.++++++|+||+++++++..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3478999999999999999999875 78999999853 234567789999999999999999998752
Q ss_pred CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 554 GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 554 ~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
...++||||+.+ +|.+.+... +++..+..++.|++.||+|||++++ +||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~~-~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi---~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMDA-NLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccCC-CHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCCHHHEEECCCCCEEEccCccc
Confidence 236999999965 888887642 8889999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccc----------cccchHHH
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT----------ESTGLVAL 703 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~----------~~~~~~~~ 703 (790)
+...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.... ....+...
T Consensus 166 ~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 166 RTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred eeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 8654321 12234578899999999999999999999999999999999999864432100 00000000
Q ss_pred ----HHHHHcCCC--ChhhhhhhcCCcC----CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 704 ----FEEVLRQPD--PREDLQRLVDPRL----GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 704 ----~~~~~~~~~--~~~~l~~~~d~~l----~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
......... ....+.+.+...+ ....+......+.+++.+||+.||++|||+.|++.+-+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~ 313 (353)
T cd07850 244 LQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY 313 (353)
T ss_pred hhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChh
Confidence 000000000 0000111111111 01112234567889999999999999999999998644
No 315
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7e-32 Score=287.07 Aligned_cols=260 Identities=25% Similarity=0.419 Sum_probs=195.5
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
+|+..+.||.|++|.||+|+.. +..+|+|.++.. ..+.+.+|++++++++|+|++++++++.+ +..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5888999999999999999985 788999988643 23567789999999999999999998875 4589999999
Q ss_pred cCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 564 ENGNLNQHLRGSG-KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 564 ~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
++ +|.+++.... ...+++..+.+++.|++.||.|||+.++ +|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i---~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRV---LHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCe---eeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 85 8988887543 2468999999999999999999999997 9999999999999999999999999975533221
Q ss_pred cccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 643 VHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
......++..|++||++.+. .++.++||||||+++|||++|+.||...... ............+. ...+..+.
T Consensus 156 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~ 229 (284)
T cd07836 156 TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-----DQLLKIFRIMGTPT-ESTWPGIS 229 (284)
T ss_pred ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-----HHHHHHHHHhCCCC-hhhHHHHh
Confidence 11234568899999988654 5789999999999999999999998654321 01111111111111 01111111
Q ss_pred C-CcCCCCC-----------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 722 D-PRLGDDY-----------PIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 722 d-~~l~~~~-----------~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+ +.+...+ .......+.+++.+|++.||.+||++.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 230 QLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred cCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 0000111 11234578899999999999999999999853
No 316
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.7e-32 Score=283.27 Aligned_cols=245 Identities=27% Similarity=0.499 Sum_probs=200.9
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|.+.+.||+|+||.||++... +..+++|++.. ...+++.+|++++++++|+|++++++.+.+ ...++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5788899999999999999987 88999999864 344678899999999999999999998764 458999999
Q ss_pred ecCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 563 IENGNLNQHLRGSG--KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 563 ~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
+++++|.+++.... ...+++..+..++.+++.||.|||++++ +|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~---~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKI---LHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCE---ecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999998643 3579999999999999999999999987 999999999999999999999999998654432
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.......|++.|+|||.+....++.++|+||||+++++|++|..||..... ...........
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~--------- 219 (258)
T cd08215 158 -DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--------LELALKILKGQ--------- 219 (258)
T ss_pred -ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH--------HHHHHHHhcCC---------
Confidence 122335688899999999888899999999999999999999999854321 11111211111
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....+......+.+++.+||+.+|++|||+.|++++
T Consensus 220 -----~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 220 -----YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111222345678999999999999999999999864
No 317
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-32 Score=311.19 Aligned_cols=271 Identities=20% Similarity=0.313 Sum_probs=187.6
Q ss_pred HhcCcccceeeeecCceEEEEEEEC---CceEEEE------------------EeC--hhhHHHHHHHHHHHHhcCCCCC
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR---GEKAAIK------------------KMD--MQASKEFLAELKVLTHVHHLNL 544 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~---g~~vavK------------------~~~--~~~~~~~~~E~~~l~~l~h~ni 544 (790)
..++|++.+.||+|+||.||++..+ +...+.| .+. ......+.+|+++|++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 3578999999999999999998754 1122222 111 1223468899999999999999
Q ss_pred cceEEEEecC-eEEEEEEEecCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEec
Q 046083 545 VRLIGYCVEG-SLFLVYEYIENGNLNQHLRGSG---KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILID 620 (790)
Q Consensus 545 v~l~g~~~~~-~~~lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~ 620 (790)
+++++++.+. ..|+++|++. ++|.+++.... ..........+++.|++.||.|||++++ +||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gI---iHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKL---IHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEEC
Confidence 9999998754 5899999985 47777765432 1223456677899999999999999998 9999999999999
Q ss_pred CCCcEEEEEeCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccch
Q 046083 621 KNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGL 700 (790)
Q Consensus 621 ~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~ 700 (790)
.++.+||+|||+++.+............|+..|+|||++.+..++.++|||||||++|||++|..++....... ....+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~-~~~~~ 380 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGK-PGKQL 380 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCC-HHHHH
Confidence 99999999999998765433333334679999999999999999999999999999999999875443222110 00111
Q ss_pred HHHHHHHH--c--CCCChhhhhhhcCCc-C---CCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 701 VALFEEVL--R--QPDPREDLQRLVDPR-L---GDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 701 ~~~~~~~~--~--~~~~~~~l~~~~d~~-l---~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
......+. . .+.....+.+.++.. + ....+ ......+.+++.+||+.||.+|||+.|++++-.
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 11111000 0 000001111111110 0 00000 012345778899999999999999999987544
No 318
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=4.2e-32 Score=290.55 Aligned_cols=261 Identities=28% Similarity=0.432 Sum_probs=193.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYE 561 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e 561 (790)
++|++.+.||+|++|.||+|... ++.+++|.+... ..+.+.+|++++++++|+|++++++++.+ ...++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57899999999999999999875 788999988542 23568899999999999999999998875 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC-CCcEEEEEeCCCcccccCC
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK-NFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~-~~~~kl~DfGla~~~~~~~ 640 (790)
|++ ++|.+++.......+++..+..++.+++.||+|||++++ +|+||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i---~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRV---LHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCe---eCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 588888866544457888999999999999999999997 99999999999985 5679999999997653321
Q ss_pred cccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhh---
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED--- 716 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 716 (790)
. ......+++.|+|||++.+. .++.++||||||+++|+|+||+.||...... ......+ .....+. ...
T Consensus 158 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~----~~~~~~~-~~~~~~~-~~~~~~ 230 (294)
T PLN00009 158 R-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI----DELFKIF-RILGTPN-EETWPG 230 (294)
T ss_pred c-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHH-HHhCCCC-hhhccc
Confidence 1 12234568899999988764 5789999999999999999999998653321 0111111 1111110 000
Q ss_pred ---hhhhcC--CcCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 717 ---LQRLVD--PRLGD----DYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 717 ---l~~~~d--~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+..... +.... .........+.+++.+|++.+|++||++.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00000 0112234568899999999999999999999874
No 319
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=3.9e-32 Score=289.08 Aligned_cols=259 Identities=27% Similarity=0.390 Sum_probs=195.2
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC---eEEEEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG---SLFLVYE 561 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~---~~~lv~e 561 (790)
|++.+.||+|+||.||+|... ++.+++|.+... ..+.+.+|++++++++|+|++++++++.+. ..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567899999999999999886 688999998754 235688999999999999999999988754 5899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+++ +|.+++.... ..+++..++.++.+++.||+|||+.++ +|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~---~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMDH-DLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGI---LHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-cHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCc---eeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 9975 8998887653 368999999999999999999999998 9999999999999999999999999986654332
Q ss_pred ccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 642 SVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ............... ..+..+
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~ 229 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-----EQLEKIFELCGSPTD-ENWPGV 229 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHhCCCch-hhcccc
Confidence 22233456788999998764 46789999999999999999999998643321 001111111111000 000000
Q ss_pred --------cC------CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 721 --------VD------PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 721 --------~d------~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.. ..+...+...+...+.+++.+||+.+|++||+++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 000000011125678999999999999999999999864
No 320
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=299.92 Aligned_cols=247 Identities=23% Similarity=0.433 Sum_probs=196.3
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeC---hhhHHHHHHHHHHHHhcCCCCCcceEE-EEecCeEEEEEEEec
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD---MQASKEFLAELKVLTHVHHLNLVRLIG-YCVEGSLFLVYEYIE 564 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~---~~~~~~~~~E~~~l~~l~h~niv~l~g-~~~~~~~~lv~e~~~ 564 (790)
.+.+...||.|.||.||+|..+ +-..|-|.+. .+..++|.-|++||....||+||+|++ |+.++.++++.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 3566789999999999999877 3345667765 345677999999999999999999998 566889999999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
||..+..+-.-+ ..|+..++.-++.+++.||.|||++++ ||||||+.|||++-+|.++|+|||.+..... .....
T Consensus 113 GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~i---IHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qkR 187 (1187)
T KOG0579|consen 113 GGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQNI---IHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQKR 187 (1187)
T ss_pred CchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcch---hhhhccccceEEEecCcEeeecccccccchh-HHhhh
Confidence 999999887654 479999999999999999999999998 9999999999999999999999998864321 11223
Q ss_pred cccccCCCccchhccc-----CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 645 TRLVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~-----~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
..+.|||+|||||+.+ ...|+.++||||||+.|.||..+.+|-...+. +...-.+....+
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp--------MRVllKiaKSeP------- 252 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP--------MRVLLKIAKSEP------- 252 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--------HHHHHHHhhcCC-------
Confidence 4578999999999875 45799999999999999999999888654332 111111111111
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
|.| .-|..-...+.+++..||..||+.||++.+++++-
T Consensus 253 ---PTL--lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hp 290 (1187)
T KOG0579|consen 253 ---PTL--LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHP 290 (1187)
T ss_pred ---Ccc--cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCc
Confidence 111 11334456789999999999999999999987653
No 321
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.4e-31 Score=284.36 Aligned_cols=255 Identities=28% Similarity=0.413 Sum_probs=190.5
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcC-CCCCcceEEEEec---CeEEEEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVH-HLNLVRLIGYCVE---GSLFLVYE 561 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~g~~~~---~~~~lv~e 561 (790)
|++.+.||+|+||.||+|... +..+|+|.++.. ......+|+.++.++. |+|++++++++.+ +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567899999999999999875 788999988642 1233457888999885 9999999998874 45899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|++ ++|.+++.... ..++|..++.++.|++.||+|||+.++ +||||+|+||+++. +.+||+|||+++.......
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i---~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGI---FHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCc---eecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 997 48888887543 368999999999999999999999998 99999999999999 9999999999986543221
Q ss_pred ccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 642 SVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
.....++..|+|||.+.. ..++.++|||||||++|||++|..||...... +............. ..+...
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~ 225 (282)
T cd07831 155 --YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-----DQIAKIHDVLGTPD--AEVLKK 225 (282)
T ss_pred --cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH-----HHHHHHHHHcCCCC--HHHHHh
Confidence 223457889999997654 55788999999999999999999998553321 11111111111111 111111
Q ss_pred cCCcCC--CCC-----------CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 721 VDPRLG--DDY-----------PIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 721 ~d~~l~--~~~-----------~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....-. ..+ ....+..+.+++.+||+.+|++||++++++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 226 FRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred hcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 110000 000 11345789999999999999999999999864
No 322
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.4e-32 Score=285.68 Aligned_cols=238 Identities=29% Similarity=0.476 Sum_probs=191.3
Q ss_pred eeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCCh
Q 046083 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNL 568 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L 568 (790)
||+|+||.||++... ++.+++|.+... ..+.+.+|++++++++|+|++++++.+.. ...+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999986 889999998643 33568899999999999999999987764 458999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc-------
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA------- 641 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~------- 641 (790)
.+++...+ .+++..+..++.|++.||+|||+.++ +|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i---~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGI---IHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCe---ecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99998654 58999999999999999999999997 9999999999999999999999999875433211
Q ss_pred ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhc
Q 046083 642 SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLV 721 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 721 (790)
.......++..|++||.......+.++||||||++++||++|..||..... ...+......
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~----------- 216 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP--------EEIFQNILNG----------- 216 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHhcC-----------
Confidence 122235678899999999888899999999999999999999999854321 1111121111
Q ss_pred CCcCCCCCCHH--HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 722 DPRLGDDYPID--SVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 722 d~~l~~~~~~~--~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.. ..+.. ....+.+++.+||+.+|++|||+.++.+.|.
T Consensus 217 --~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 217 --KI--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred --Cc--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00 01111 2567899999999999999999966666555
No 323
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=5.4e-32 Score=288.82 Aligned_cols=259 Identities=24% Similarity=0.345 Sum_probs=200.6
Q ss_pred CcccceeeeecCceEEEEEEEC-----CceEEEEEeChh-------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR-----GEKAAIKKMDMQ-------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSL 556 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~-----g~~vavK~~~~~-------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~ 556 (790)
+|++.+.||+|+||.||++... ++.+|||.++.. ..+.+.+|++++.++ +|+|++++++.+.. ...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 4778899999999999998753 568999988632 234578899999999 59999999987764 458
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
++||||+++++|.+++... ..+++..+..++.|+++||.|||+.++ +|+||+|+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~---~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGI---IYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHeEECCCCCEEEEECcccccc
Confidence 8999999999999998754 358899999999999999999999997 99999999999999999999999998865
Q ss_pred ccCCcccccccccCCCccchhcccCCC--CCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 637 EVGSASVHTRLVGTFGYMPPEYAQYGE--VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 637 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
............|+..|+|||.+.+.. .+.++||||||+++|||++|..||...... .............
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~----~~~~~~~~~~~~~---- 227 (288)
T cd05583 156 LAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ----NSQSEISRRILKS---- 227 (288)
T ss_pred ccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc----chHHHHHHHHHcc----
Confidence 433222222346789999999987665 788999999999999999999998543211 0011111111111
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCC
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWD 773 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~ 773 (790)
. ...+......+.+++.+||+.+|++|||+.++.+.|...--...+|+
T Consensus 228 -------~----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~~ 275 (288)
T cd05583 228 -------K----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDWD 275 (288)
T ss_pred -------C----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCHH
Confidence 0 11222334568899999999999999999988887776544555553
No 324
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=8e-32 Score=294.35 Aligned_cols=261 Identities=27% Similarity=0.404 Sum_probs=195.7
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhc-CCCCCcceEEEEecC---eEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHV-HHLNLVRLIGYCVEG---SLF 557 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~---~~~ 557 (790)
.++|++.+.||+|+||.||+|.+. ++.+++|++.. .....+.+|+.+++++ +|+||+++++++... ..+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 467889999999999999999875 78899998742 2345677899999999 999999999987532 479
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
+||||+. ++|.+++... .++|..+..++.+++.||+|||+.++ +|+||||+||+++.++.+||+|||++....
T Consensus 86 lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i---~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNV---IHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 9999997 4999988754 58899999999999999999999998 999999999999999999999999998654
Q ss_pred cCCc----ccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 638 VGSA----SVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 638 ~~~~----~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
.... .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||....... ............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-----~~~~~~~~~~~~- 232 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-----QLEKIIEVIGPP- 232 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHHHhCCC-
Confidence 3321 12233568899999998764 457899999999999999999999985433210 000000110000
Q ss_pred Chhhhh--------hhcCC----cCC--CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 713 PREDLQ--------RLVDP----RLG--DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 713 ~~~~l~--------~~~d~----~l~--~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
..+.+. .+++. ... .......+..+.+++.+||+.+|++|||+.+++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~ 296 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHP 296 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhCh
Confidence 000000 01110 000 000112456789999999999999999999999863
No 325
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=6.2e-32 Score=292.12 Aligned_cols=266 Identities=26% Similarity=0.404 Sum_probs=194.1
Q ss_pred CcccceeeeecCceEEEEEEEC----CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEecC---eEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR----GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVEG---SLF 557 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~----g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~---~~~ 557 (790)
+|++.++||+|+||.||+|... +..+|+|.+... ..+.+.+|+.++.+++||||+++++++.+. ..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999984 579999998752 235678899999999999999999998744 489
Q ss_pred EEEEEecCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC----CCcEEEEEe
Q 046083 558 LVYEYIENGNLNQHLRGSG---KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK----NFRAKVADF 630 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~----~~~~kl~Df 630 (790)
+||||+++ +|.+++.... ...+++..+..++.|++.||.|||+.++ +||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i---~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWV---LHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCE---eeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 6777664321 2368999999999999999999999997 99999999999999 999999999
Q ss_pred CCCcccccCCcc--cccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCcccccccccccc-----ccchHH
Q 046083 631 GLAKLTEVGSAS--VHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITE-----STGLVA 702 (790)
Q Consensus 631 Gla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~-----~~~~~~ 702 (790)
|++......... ......++..|+|||.+.+. .++.++||||||++++||++|+.||......... ...+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 999865433221 12234678899999988764 5789999999999999999999999754432200 001111
Q ss_pred HHHHHHcCCCCh--------hhhhhhcCCcCCCCCC---------H--HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 703 LFEEVLRQPDPR--------EDLQRLVDPRLGDDYP---------I--DSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 703 ~~~~~~~~~~~~--------~~l~~~~d~~l~~~~~---------~--~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.+ ..+..+... .......+......++ . ....++.+++.+||+.||++|||+.|++++
T Consensus 237 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IF-EVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HH-HHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 11 111111000 0000000000000111 0 234568899999999999999999999864
No 326
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=7.9e-32 Score=285.87 Aligned_cols=240 Identities=28% Similarity=0.418 Sum_probs=189.9
Q ss_pred eeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCCh
Q 046083 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNL 568 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L 568 (790)
||+|+||+||++... ++.+++|.+... ..+.+.+|++++++++|||++++++.+.. +..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999875 789999988642 23346789999999999999999988764 568999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 648 (790)
.+++.......+++..+..++.+++.||.|||+.++ +|+||+|+||++++++.++|+|||++...... .......
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i---~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRI---VYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGRA 155 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEEECCCCCEEEccCcchhhhccC--Ccccccc
Confidence 999987655579999999999999999999999998 99999999999999999999999998765331 1122345
Q ss_pred cCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCC
Q 046083 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDD 728 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~ 728 (790)
++..|+|||.+.+..++.++||||||+++++|++|+.||....... ........... ....
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~~~---------------~~~~ 216 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV----EKEELKRRTLE---------------MAVE 216 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc----cHHHHHhcccc---------------cccc
Confidence 7889999999988889999999999999999999999986543210 00000000000 0111
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 729 YPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 729 ~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
.+......+.+++.+||+.+|++|| +..+++.+
T Consensus 217 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 217 YPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred CCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 2233456788999999999999999 66666653
No 327
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.1e-31 Score=287.24 Aligned_cols=261 Identities=25% Similarity=0.389 Sum_probs=192.2
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcC-CCCCcceEEEEec-Ce-----
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVH-HLNLVRLIGYCVE-GS----- 555 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~~----- 555 (790)
++|++.+.||+|+||.||+|... ++.+|+|.++.. ..+.+.+|+.+++.++ |+|++++++++.. ..
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46889999999999999999975 789999987643 2356888999999995 6999999998763 22
Q ss_pred EEEEEEEecCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC-CCcEEEEEeC
Q 046083 556 LFLVYEYIENGNLNQHLRGSG---KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK-NFRAKVADFG 631 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~-~~~~kl~DfG 631 (790)
.|++|||+++ +|.+++.... ...+++..++.++.|++.||.|||++++ +||||+|+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i---~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGV---MHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCChHHEEEecCCCeEEEeecc
Confidence 6999999986 8988886532 2468999999999999999999999998 99999999999998 8899999999
Q ss_pred CCcccccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcC
Q 046083 632 LAKLTEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQ 710 (790)
Q Consensus 632 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 710 (790)
+++....... ......+++.|+|||.+.+ ..++.++|+||||+++|||++|..||...... ......+. .+..
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~----~~~~~~~~-~~~~ 230 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL----QQLLHIFK-LLGT 230 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH----HHHHHHHH-HhCC
Confidence 9885532211 1122356788999998865 45789999999999999999999998653221 00111111 1110
Q ss_pred CCChhhhhhhc-------CCcCC----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 711 PDPREDLQRLV-------DPRLG----DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 711 ~~~~~~l~~~~-------d~~l~----~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+. ...+.... .+... ..........+.+++.+||+.+|.+||+++|++.+
T Consensus 231 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 231 PT-EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CC-hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 00000000 00000 00011345678899999999999999999999864
No 328
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.98 E-value=1.4e-31 Score=279.41 Aligned_cols=242 Identities=31% Similarity=0.532 Sum_probs=197.8
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~ 562 (790)
+|++.+.||+|++|.||++... ++.+++|.+... ..+.+.+|++++++++|+|++++++++.+ +..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788999999999999999875 678999988643 34678999999999999999999998775 458999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+++++|.+++... ..+++..+..++.+++.||.|||+.++ +|+||+|+||+++.++.++|+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i---~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGV---IHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCc---ccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999999999865 358999999999999999999999998 99999999999999999999999999876543321
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
.....++..|+|||......++.++||||||+++|+|++|+.||..... ...... ....
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-------~~~~~~-~~~~------------ 214 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-------MAALFR-IVQD------------ 214 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-------HHHHHH-Hhcc------------
Confidence 2335678899999999888899999999999999999999999854321 111111 1100
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
.....+......+.+++.+||+.+|++|||+.+++.
T Consensus 215 --~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 215 --DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred --CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 011222334567889999999999999999999875
No 329
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.98 E-value=9.9e-32 Score=285.56 Aligned_cols=239 Identities=24% Similarity=0.338 Sum_probs=183.6
Q ss_pred eeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHH---hcCCCCCcceEEEEe-cCeEEEEEEEec
Q 046083 497 KIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLT---HVHHLNLVRLIGYCV-EGSLFLVYEYIE 564 (790)
Q Consensus 497 ~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~---~l~h~niv~l~g~~~-~~~~~lv~e~~~ 564 (790)
.||+|+||.||++... ++.+|+|.+.... ...+.+|..+++ ..+|||++.+++++. ++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999875 7899999875321 122344444333 347999999998876 456899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+++|.+++...+ .+++..+..++.|++.||+|||+.++ +|+||||+|||+++++.++|+|||++....... .
T Consensus 81 ~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~i---vH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---~ 152 (279)
T cd05633 81 GGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKK---P 152 (279)
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCc---CCCCCCHHHEEECCCCCEEEccCCcceeccccC---c
Confidence 999999987643 59999999999999999999999998 999999999999999999999999987543221 1
Q ss_pred cccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 645 TRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
....|+..|+|||.+.. ..++.++|+|||||+++||++|..||....... ... ..... .
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-----~~~-~~~~~--------------~ 212 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHE-IDRMT--------------L 212 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC-----HHH-HHHHh--------------h
Confidence 23468999999999864 568999999999999999999999986533210 000 00000 0
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVALM 763 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~L~ 763 (790)
......+...+.++.+++.+||+.||++|| +++|++++..
T Consensus 213 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~ 257 (279)
T cd05633 213 TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVF 257 (279)
T ss_pred cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCcc
Confidence 011122334456788999999999999999 5999887644
No 330
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.98 E-value=1.7e-31 Score=286.03 Aligned_cols=252 Identities=20% Similarity=0.281 Sum_probs=181.3
Q ss_pred cCcccceeeeecCceEEEEEEECC-----ceEEEEEeChhhH--------------HHHHHHHHHHHhcCCCCCcceEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELRG-----EKAAIKKMDMQAS--------------KEFLAELKVLTHVHHLNLVRLIGY 550 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~g-----~~vavK~~~~~~~--------------~~~~~E~~~l~~l~h~niv~l~g~ 550 (790)
++|.+.+.||+|+||.||+|...+ ..+++|....... .....+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 578999999999999999998763 3556665432110 112233344566789999999987
Q ss_pred EecCe-----EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcE
Q 046083 551 CVEGS-----LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRA 625 (790)
Q Consensus 551 ~~~~~-----~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~ 625 (790)
+.... .++++|++.. ++.+.+.... ..++..+..++.|++.||+|||+.++ +||||||+|||++.++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i---iHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHGI---SHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEEcCCCcE
Confidence 65332 3667776644 6666665432 35788889999999999999999997 999999999999999999
Q ss_pred EEEEeCCCcccccCCcc------cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccc
Q 046083 626 KVADFGLAKLTEVGSAS------VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTG 699 (790)
Q Consensus 626 kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~ 699 (790)
+|+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~---~~ 242 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG---NL 242 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch---HH
Confidence 99999999865322111 1123468999999999999999999999999999999999999997653211 00
Q ss_pred hHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 700 LVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 700 ~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
.......++ .++..+.+. ....+..+.+++..|++.+|++||++.++.+.|
T Consensus 243 ~~~~~~~~~---------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 243 IHAAKCDFI---------KRLHEGKIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhHHHHH---------HHhhhhhhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 000001111 111111110 112346789999999999999999999999876
No 331
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.98 E-value=4.9e-32 Score=292.87 Aligned_cols=261 Identities=18% Similarity=0.250 Sum_probs=194.1
Q ss_pred ccceeeeecCceEEEEEEECCceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCC
Q 046083 493 SMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENG 566 (790)
Q Consensus 493 ~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g 566 (790)
.+.+.+|.|+++.||++...++.+|+|+++. ...+.+.+|++++++++|+||+++++++.+ ...+++|||++++
T Consensus 5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 3456667777777888777799999999753 234578999999999999999999998774 4589999999999
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc-----
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA----- 641 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~----- 641 (790)
+|.+++.......+++.....++.|++.||+|||++++ +||||||+||+++.++.+||+|||.+........
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i---vH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~ 161 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGF---IHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVV 161 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCcceEEEecCCceEEecCccceeecccccccccc
Confidence 99999986544568899999999999999999999998 9999999999999999999999998875432211
Q ss_pred -ccccccccCCCccchhcccC--CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC------
Q 046083 642 -SVHTRLVGTFGYMPPEYAQY--GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD------ 712 (790)
Q Consensus 642 -~~~~~~~gt~~y~aPE~~~~--~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------ 712 (790)
.......++..|+|||++.. ..++.++|+|||||++|||++|..||....... ...+.......
T Consensus 162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-------~~~~~~~~~~~~~~~~~ 234 (314)
T cd08216 162 HDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-------MLLEKVRGTVPCLLDKS 234 (314)
T ss_pred ccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-------HHHHHHhccCccccccC
Confidence 11122456778999999875 358899999999999999999999996543211 01111100000
Q ss_pred -Chh---hhh----hhcCCc----CCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 713 -PRE---DLQ----RLVDPR----LGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 713 -~~~---~l~----~~~d~~----l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
... ... ...++. ...........++.+++.+||+.||++|||+++++++-.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~ 297 (314)
T cd08216 235 TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSF 297 (314)
T ss_pred chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCch
Confidence 000 000 000000 011122334567889999999999999999999998655
No 332
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.98 E-value=1.4e-31 Score=282.53 Aligned_cols=247 Identities=22% Similarity=0.331 Sum_probs=189.7
Q ss_pred HHHHHHhcCcccceee--eecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhc-CCCCCcceEEEEe-cCeE
Q 046083 483 EELAKATNDFSMGNKI--GQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHV-HHLNLVRLIGYCV-EGSL 556 (790)
Q Consensus 483 ~~l~~~~~~f~~~~~l--G~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~-~~~~ 556 (790)
.+.....++|++.+.+ |+|+||.||++... +..+++|.......... |+.....+ +|+|++++++.+. ++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI--EPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh--hHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 3444445677777776 99999999999875 77899999875433222 22222222 7999999999876 4568
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC-cEEEEEeCCCcc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKL 635 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~-~~kl~DfGla~~ 635 (790)
++||||+++++|.+++.... .+++..+..++.|+++||.|||+.++ +||||||+||+++.++ .++|+|||++..
T Consensus 85 ~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~nil~~~~~~~~~l~dfg~~~~ 159 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNI---IHNDIKLENVLYDRAKDRIYLCDYGLCKI 159 (267)
T ss_pred EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---eeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence 99999999999999998653 69999999999999999999999997 9999999999999998 999999999876
Q ss_pred cccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 636 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
.... ....++..|+|||++.+..++.++||||||+++|||++|..||....... .....+...
T Consensus 160 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~--------- 222 (267)
T PHA03390 160 IGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE---LDLESLLKR--------- 222 (267)
T ss_pred cCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch---hhHHHHHHh---------
Confidence 5322 22457889999999998899999999999999999999999997432211 111111110
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS-MRAIVV 760 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt-~~evl~ 760 (790)
.... ...+......+.+++.+||+.+|.+||+ ++|+++
T Consensus 223 -----~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 223 -----QQKK--LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -----hccc--CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 1100 0112235567899999999999999996 688875
No 333
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.98 E-value=1.3e-31 Score=287.80 Aligned_cols=262 Identities=27% Similarity=0.412 Sum_probs=195.9
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC------
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG------ 554 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------ 554 (790)
..++|++.+.||+|+||.||+|... ++.+++|.++.. ....+.+|++++++++|||++++++++.+.
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4578999999999999999999985 788999998642 224577899999999999999999987632
Q ss_pred -----eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEE
Q 046083 555 -----SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVAD 629 (790)
Q Consensus 555 -----~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~D 629 (790)
..++++||+++ +|..++... ...+++..+..++.|++.||+|||+.++ +|+||+|+||++++++.+||+|
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i---~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNF---LHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEECCCCcEEeCc
Confidence 47999999986 777777654 3468999999999999999999999998 9999999999999999999999
Q ss_pred eCCCcccccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHH
Q 046083 630 FGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVL 708 (790)
Q Consensus 630 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
||++...............++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..........
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-----~~~~~~~~~~ 234 (302)
T cd07864 160 FGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-----AQLELISRLC 234 (302)
T ss_pred ccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHHh
Confidence 99998664433222222345778999998864 35789999999999999999999998643211 1111111111
Q ss_pred cCCCChhhhhhhc--------CC------cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 709 RQPDPREDLQRLV--------DP------RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 709 ~~~~~~~~l~~~~--------d~------~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..+.. ..+..+. ++ ..... ....+..+.+++.+||+.+|.+||+++++++.
T Consensus 235 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 235 GSPCP-AVWPDVIKLPYFNTMKPKKQYRRRLREE-FSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CCCCh-hhcccccccccccccccccccccchhhh-cCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11110 0110000 00 00000 11234678999999999999999999999864
No 334
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.98 E-value=7.8e-32 Score=286.55 Aligned_cols=259 Identities=28% Similarity=0.412 Sum_probs=193.1
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChhh----HHHHHHHHHHHHhcC-CCCCcceEEEEec-CeEEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA----SKEFLAELKVLTHVH-HLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~----~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
|++.+.||+|+||.||+|... ++.++||++.... .....+|+..+.+++ |+|++++++++.+ +..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567899999999999999985 6789999886432 223567899999998 9999999998765 4589999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
+|+|.+++.......+++..+..++.+++.+|.|||++++ +|+||+|+||+++.++.++|+|||++....... .
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i---~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--~ 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGF---FHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--P 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCChhhEEEcCCCCEEEeecccceeccCCC--C
Confidence 8899999887654568999999999999999999999998 999999999999999999999999998654322 1
Q ss_pred ccccccCCCccchhccc-CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh-----hh
Q 046083 644 HTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE-----DL 717 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~-~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l 717 (790)
.....++..|+|||.+. ...++.++|+||||+++|||++|+.||....... ........+..+.... .+
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 155 YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-----QLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-----HHHHHHHhcCCCChhhhhhHhhh
Confidence 23356788999999875 4467999999999999999999999885443210 0001111111110000 00
Q ss_pred hhhcCCcCC-------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 718 QRLVDPRLG-------DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 718 ~~~~d~~l~-------~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....+..+. ..........+.+++++||+.+|++|||++|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000 00001124678999999999999999999999764
No 335
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.98 E-value=1.3e-31 Score=288.87 Aligned_cols=263 Identities=29% Similarity=0.378 Sum_probs=195.8
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh-----HHHHHHHHHHHHhcCCCCCcceEEEEecC---eEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA-----SKEFLAELKVLTHVHHLNLVRLIGYCVEG---SLFL 558 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~g~~~~~---~~~l 558 (790)
.++|++.+.||+|+||.||+|... ++.+|+|.++... ...+.+|++++++++|+|++++++++.+. ..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999985 8899999886332 23466899999999999999999988643 4799
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
||||+.+ +|.+++.... ..+++..+..++.|++.||+|||+.++ +||||||+||++++++.+||+|||++.....
T Consensus 86 v~e~~~~-~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i---~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFI---IHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCCC-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 9999975 8888887543 468999999999999999999999998 9999999999999999999999999986643
Q ss_pred CCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ............+.. ..+
T Consensus 161 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-----~~~~~~~~~~~~~~~-~~~ 233 (309)
T cd07845 161 PAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-----EQLDLIIQLLGTPNE-SIW 233 (309)
T ss_pred ccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCCCCh-hhc
Confidence 221 1222345788999999865 45789999999999999999999998643321 111111111111100 000
Q ss_pred hhhcC------CcCC--C--CC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 718 QRLVD------PRLG--D--DY---PIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 718 ~~~~d------~~l~--~--~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..+.+ -.+. . .. .......+.+++.+|++.||++|||++|++.+-+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~ 292 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSY 292 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChh
Confidence 00000 0000 0 00 0112456789999999999999999999997654
No 336
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=1.8e-31 Score=284.13 Aligned_cols=259 Identities=26% Similarity=0.399 Sum_probs=192.6
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhc---CCCCCcceEEEEecC-e-----
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHV---HHLNLVRLIGYCVEG-S----- 555 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l---~h~niv~l~g~~~~~-~----- 555 (790)
|++.+.||+|+||.||+|..+ +..+|+|.++.. ....+.+|+.++.++ +|+|++++++++.+. .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567899999999999999986 789999998632 223566788777666 599999999988643 2
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
.+++|||+.+ +|.+++.......+++..++.++.+++.||.|||+.++ +|+||+|+||+++.++.+||+|||++..
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i---~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRI---VHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCe---eeccCChhhEEEccCCCEEEeccCccee
Confidence 7999999975 89998876544468999999999999999999999997 9999999999999999999999999987
Q ss_pred cccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 636 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
...... .....++..|+|||.+.+..++.++|+||||+++|||++|++||...... ......... ........
T Consensus 157 ~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~ 229 (287)
T cd07838 157 YSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA----DQLDKIFDV-IGLPSEEE 229 (287)
T ss_pred ccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH----HHHHHHHHH-cCCCChHh
Confidence 643321 12335788999999999999999999999999999999998888643221 111111111 00000000
Q ss_pred h------hhhhcCCcCC---CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 716 D------LQRLVDPRLG---DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 716 ~------l~~~~d~~l~---~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
. .......... .....+....+.+++.+||+.||.+||+++|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0 0000000000 01112345677899999999999999999999853
No 337
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.98 E-value=1.9e-31 Score=290.27 Aligned_cols=257 Identities=20% Similarity=0.314 Sum_probs=190.7
Q ss_pred eeeeec--CceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEEecC
Q 046083 496 NKIGQG--GFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G--~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~ 565 (790)
..||+| +||+||++... ++.||+|.+... ..+.+.+|+.+++.++||||+++++++..+ ..++||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456666 89999999884 899999998632 236688999999999999999999998754 58999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc--
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV-- 643 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~-- 643 (790)
++|.+++.......+++..+..++.|++.||+|||+.++ +||||||+|||++.++.++++||+............
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i---vHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGY---IHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 999999987655568999999999999999999999998 999999999999999999999998654322111100
Q ss_pred ----ccccccCCCccchhcccCC--CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC----
Q 046083 644 ----HTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP---- 713 (790)
Q Consensus 644 ----~~~~~gt~~y~aPE~~~~~--~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 713 (790)
.....++..|+|||++.+. .++.++|||||||++|||++|+.||....... ...........
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~ 232 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ--------MLLQKLKGPPYSPLD 232 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH--------HHHHHhcCCCCCCcc
Confidence 0112345679999999763 47899999999999999999999986532210 00000000000
Q ss_pred -----------------------hhhh-----hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 714 -----------------------REDL-----QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 714 -----------------------~~~l-----~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.... ..+.+..+....+......+.+|+.+||+.||++|||++|++++-+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~ 310 (328)
T cd08226 233 ITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAF 310 (328)
T ss_pred ccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHH
Confidence 0000 0111111222223346678899999999999999999999987655
No 338
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1e-32 Score=275.46 Aligned_cols=256 Identities=25% Similarity=0.397 Sum_probs=204.4
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHHhcCCCCCcce-EEEEecCeEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLV 559 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~~l~h~niv~l-~g~~~~~~~~lv 559 (790)
-++|..++.||+|.||.|-.++.+ ++.+|+|+++.+. ...-..|-+.|+..+||.+..+ |.|.....+|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 467889999999999999999876 8899999987542 3345678899999999999888 456667789999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+.||.|.-+|.+. ..+++.....+..+|+.||.|||++++ |.||||.+|.|||.+|++||.|||+.+..-.
T Consensus 247 MeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~i---vYRDlKLENLlLDkDGHIKitDFGLCKE~I~- 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNI---VYRDLKLENLLLDKDGHIKITDFGLCKEEIK- 320 (516)
T ss_pred EEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCe---eeeechhhhheeccCCceEeeecccchhccc-
Confidence 9999999999998764 358888888999999999999999998 9999999999999999999999999985432
Q ss_pred CcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
.......++|||.|+|||++....|....|+|.+||++|||++|+.||...+. ..+++-++..
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------~kLFeLIl~e--------- 383 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------EKLFELILME--------- 383 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch--------hHHHHHHHhh---------
Confidence 23344568999999999999999999999999999999999999999965432 2333333221
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC--HHHHHHHHHhhccCCccCC
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS--MRAIVVALMTLSSSSEDWD 773 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt--~~evl~~L~~l~~~~~~~~ 773 (790)
. -.+|.....+...|+...|..||.+|.. .+++.+...----.+.+|+
T Consensus 384 ----d--~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~ 433 (516)
T KOG0690|consen 384 ----D--LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWE 433 (516)
T ss_pred ----h--ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence 1 1345556667888999999999999953 3333333333333445664
No 339
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.98 E-value=9e-32 Score=293.96 Aligned_cols=267 Identities=28% Similarity=0.408 Sum_probs=199.3
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC------e
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG------S 555 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~ 555 (790)
.++|.+.+.||+|+||.||++... +..+|||.+.. .....+.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457899999999999999999875 78999998753 2335677899999999999999999977532 3
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
.+++|||+. ++|.+++...+ .+++..+..++.|++.||.|||++++ +|+||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i---~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSANV---LHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCE---ecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999996 68998887643 58999999999999999999999997 9999999999999999999999999986
Q ss_pred cccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 636 TEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 636 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
..... .......++..|+|||.+.. ..++.++||||||+++|+|++|+.||...... ................
T Consensus 158 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 158 TSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-----HQLKLITELLGSPSEE 231 (337)
T ss_pred cCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-----HHHHHHHHHhCCCChH
Confidence 54322 22233467889999998865 46899999999999999999999998543211 1111111111111100
Q ss_pred -------hhhhhhcCC---cCCC---CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhhcc
Q 046083 715 -------EDLQRLVDP---RLGD---DYPIDSVRKMARLARACTQENPQLRPSMRAIVVA--LMTLSS 767 (790)
Q Consensus 715 -------~~l~~~~d~---~l~~---~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~l~~ 767 (790)
....+.+.. .... .........+.+++.+||+.+|++|||++|++++ +..+..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~ 299 (337)
T cd07858 232 DLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299 (337)
T ss_pred HhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcC
Confidence 001111100 0000 0112345678899999999999999999999987 544433
No 340
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=7.4e-32 Score=313.76 Aligned_cols=254 Identities=28% Similarity=0.465 Sum_probs=204.5
Q ss_pred HhcCcccceeeeecCceEEEEEEEC---------CceEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEec
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR---------GEKAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCVE 553 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~---------g~~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~ 553 (790)
..+++.+.+.||+|.||.|++|... ...||||.++. ...+.+..|+++|+.+ +|+|++.++|+|.+
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~ 373 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQ 373 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeecc
Confidence 3444556679999999999999754 23689999874 3456799999999999 69999999999986
Q ss_pred -CeEEEEEEEecCCChhhhhhcCC------------C--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEE
Q 046083 554 -GSLFLVYEYIENGNLNQHLRGSG------------K--DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANIL 618 (790)
Q Consensus 554 -~~~~lv~e~~~~g~L~~~l~~~~------------~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NIL 618 (790)
+..++|+||+..|+|.++|+... . ..++....+.++.|||.|++||++..+ |||||..+|||
T Consensus 374 ~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~---vHRDLAaRNVL 450 (609)
T KOG0200|consen 374 DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPC---VHRDLAARNVL 450 (609)
T ss_pred CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCc---cchhhhhhhEE
Confidence 56899999999999999998765 0 238899999999999999999999997 99999999999
Q ss_pred ecCCCcEEEEEeCCCcccccCCcccccccc--cCCCccchhcccCCCCCchhhHHHHHHHHHHHHh-CCccccccccccc
Q 046083 619 IDKNFRAKVADFGLAKLTEVGSASVHTRLV--GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS-AMEAVVKTNETIT 695 (790)
Q Consensus 619 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt-G~~p~~~~~~~~~ 695 (790)
+.++..+||+|||+++............-. -...|||||.+....|+.++|||||||+||||+| |..|+.....
T Consensus 451 i~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~--- 527 (609)
T KOG0200|consen 451 ITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP--- 527 (609)
T ss_pred ecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc---
Confidence 999999999999999965443332222222 2456999999999999999999999999999998 6666633110
Q ss_pred cccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 696 ESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
. ..+-+.+.+..+.+.|..+..++.++|+.||+.+|++||++.++++.+...
T Consensus 528 ----~--------------~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 528 ----T--------------EELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred ----H--------------HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 0 111223333333455667788999999999999999999999999999985
No 341
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=1.3e-31 Score=288.83 Aligned_cols=253 Identities=27% Similarity=0.418 Sum_probs=197.2
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYE 561 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e 561 (790)
.|...+.||+|+||.||+|... +..+++|.+.. ...+++.+|+++++.++|+|++++++++.+. ..++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 3666789999999999999975 77899998752 2234678899999999999999999988754 5899999
Q ss_pred EecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 562 YIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 562 ~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
|+. |+|.+++.... ..+++..+..++.+++.||.|||+.++ +||||+|+||+++.++.++|+|||++......
T Consensus 96 ~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~i---~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 96 YCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNM---IHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred ccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 996 58888776443 358999999999999999999999998 99999999999999999999999998765322
Q ss_pred ccccccccCCCccchhccc---CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 642 SVHTRLVGTFGYMPPEYAQ---YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
....++..|+|||.+. ...++.++|||||||++|||++|..|+...... ..........
T Consensus 169 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--------~~~~~~~~~~------- 230 (308)
T cd06634 169 ---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNE------- 230 (308)
T ss_pred ---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--------HHHHHHhhcC-------
Confidence 2345788999999974 356888999999999999999999997543211 0011111100
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCCc
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDI 774 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~ 774 (790)
.+. ..+......+.+++.+||+.+|++||++.+++.+.+........+.+
T Consensus 231 ---~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~~~~ 280 (308)
T cd06634 231 ---SPA---LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIM 280 (308)
T ss_pred ---CCC---cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChhHHH
Confidence 011 11123445688999999999999999999999987766655554443
No 342
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.98 E-value=2.1e-31 Score=286.97 Aligned_cols=259 Identities=30% Similarity=0.410 Sum_probs=191.5
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC--------
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-------- 554 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-------- 554 (790)
++|++.+.||+|+||.||+|... ++.+|+|.+... ....+.+|++++++++||||+++++++...
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 57899999999999999999885 789999988532 123467899999999999999999987532
Q ss_pred -eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 555 -SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 555 -~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
..++||||+.+ +|.+++.... ..+++.+++.++.|++.||.|||++++ +|+||||+||+++.++.+||+|||++
T Consensus 92 ~~~~lv~e~~~~-~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i---~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 92 GSFYLVFEFCEH-DLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNKI---LHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred ceEEEEEcCCCc-CHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCe---eccCCCHHHEEECCCCcEEECcCCCc
Confidence 35999999975 8888886543 358999999999999999999999997 99999999999999999999999999
Q ss_pred cccccCCcc---cccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHc
Q 046083 634 KLTEVGSAS---VHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR 709 (790)
Q Consensus 634 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 709 (790)
......... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||...... ........+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~-----~~~~~~~~~~~ 241 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ-----HQLTLISQLCG 241 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhC
Confidence 865432211 11234567889999988764 4788999999999999999999988543321 11111111111
Q ss_pred CCCCh--------hhhhh---------hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 710 QPDPR--------EDLQR---------LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 710 ~~~~~--------~~l~~---------~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..... ..... .+...+.. ......+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 242 SITPEVWPGVDKLELFKKMELPQGQKRKVKERLKP---YVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CCChhhcccccchhhhhhccCCCccchhhHHhccc---ccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 10000 00000 00000000 0112456789999999999999999999864
No 343
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.98 E-value=1.7e-31 Score=285.26 Aligned_cols=247 Identities=25% Similarity=0.378 Sum_probs=193.1
Q ss_pred CcccceeeeecCceEEEEEEE-----CCceEEEEEeChh-------hHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeE
Q 046083 491 DFSMGNKIGQGGFGAVFYAEL-----RGEKAAIKKMDMQ-------ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSL 556 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~-----~g~~vavK~~~~~-------~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~ 556 (790)
+|++.+.||+|+||.||++.. .|..+|+|.++.. ..+.+.+|++++.++ +|+||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 478889999999999999986 3788999998642 235678899999999 59999999988764 457
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
++||||+++++|.+++.... .+++..+..++.+++.||.|||+.++ +||||+|+|||+++++.+||+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i---~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGI---IYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHeEECCCCCEEEeeCccceec
Confidence 89999999999999997643 58899999999999999999999997 99999999999999999999999999865
Q ss_pred ccCCcccccccccCCCccchhcccCC--CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 637 EVGSASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 637 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
............|+..|+|||.+... .++.++||||||+++|+|++|..||...... .............
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~----~~~~~~~~~~~~~---- 227 (290)
T cd05613 156 HEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK----NSQAEISRRILKS---- 227 (290)
T ss_pred ccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc----ccHHHHHHHhhcc----
Confidence 43322222345688999999998753 4678999999999999999999998542211 1111111111111
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVA 761 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~ 761 (790)
...++......+.+++.+||+.+|++|| +.++++.+
T Consensus 228 -----------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 228 -----------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred -----------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 0112333456788999999999999997 66776654
No 344
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.98 E-value=1.5e-31 Score=291.93 Aligned_cols=266 Identities=24% Similarity=0.370 Sum_probs=199.4
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-----CeE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-----GSL 556 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-----~~~ 556 (790)
.++|++.+.||+|+||.||+|... +..+++|++... ..+.+.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368999999999999999999875 889999988642 33567889999999999999999987642 347
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
++||||+. ++|.+++.... .+++..+..++.|++.||+|||++++ +||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~i---vH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSANV---IHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999996 58999987643 48999999999999999999999997 99999999999999999999999999765
Q ss_pred ccCCcc---cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 637 EVGSAS---VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 637 ~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
...... ......++..|+|||.+.. ..++.++||||||+++|||++|+.||...... ............+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-----~~~~~~~~~~g~~~ 232 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-----HQLKLILSVLGSPS 232 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-----HHHHHHHHHhCCCh
Confidence 432211 1123468889999998865 46889999999999999999999999543221 00111111111110
Q ss_pred C-------hhhhhhhcCCc-CCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 713 P-------REDLQRLVDPR-LGDDY-----PIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 713 ~-------~~~l~~~~d~~-l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
. ...+.+..+.. ..... ....+..+.+++.+||+.+|++||++++++.+.+.-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~ 298 (334)
T cd07855 233 EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA 298 (334)
T ss_pred hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence 0 00111111100 00011 122456799999999999999999999999876653
No 345
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.98 E-value=6.6e-32 Score=286.24 Aligned_cols=243 Identities=30% Similarity=0.501 Sum_probs=198.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcC-CCCCcceEEEEec-CeEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVH-HLNLVRLIGYCVE-GSLFLV 559 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~~~~lv 559 (790)
++|.+.+.||+|+||.||++... +..+++|.+.. ...+.+.+|.+++++++ |+||+++++++.+ ...+++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47889999999999999999885 88999998864 22356888999999998 9999999998764 468999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+++++|.+++...+ .+++..++.++.+++.||.|||++++ +|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~---~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGI---IHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999998754 59999999999999999999999998 99999999999999999999999999865432
Q ss_pred Cc-------------------ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccch
Q 046083 640 SA-------------------SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGL 700 (790)
Q Consensus 640 ~~-------------------~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~ 700 (790)
.. .......++..|+|||.+....++.++|+||||+++++|++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-------- 227 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-------- 227 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--------
Confidence 21 111234578899999999888899999999999999999999999865431
Q ss_pred HHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCH----HHHHH
Q 046083 701 VALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSM----RAIVV 760 (790)
Q Consensus 701 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~----~evl~ 760 (790)
...+..... .....+...+..+.+++.+||+.+|.+||++ ++++.
T Consensus 228 ~~~~~~~~~---------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 YLTFQKILK---------------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHHHh---------------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 111111111 1112233345678999999999999999999 77765
No 346
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.98 E-value=4.6e-31 Score=285.29 Aligned_cols=239 Identities=29% Similarity=0.467 Sum_probs=188.7
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVYEY 562 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~e~ 562 (790)
|...+.||+|+||.||+|... +..+++|.+.. ...+.+.+|+++++.++|||++++++++.++ ..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 566788999999999999875 78999998853 2235688899999999999999999988754 58999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+. ++|.+++.... ..+++..++.++.+++.||.|||+.++ +|+||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~al~~LH~~gi---~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVHK-KPLQEVEIAAITHGALQGLAYLHSHNM---IHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 96 57888776543 368999999999999999999999998 9999999999999999999999999864321
Q ss_pred cccccccCCCccchhccc---CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 643 VHTRLVGTFGYMPPEYAQ---YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~---~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
.....|+..|+|||++. ...++.++||||||+++|||++|..|+...... ...........
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~--------~~~~~~~~~~~------- 237 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--------SALYHIAQNDS------- 237 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH--------HHHHHHHhcCC-------
Confidence 22356788999999984 456889999999999999999999998553221 11111111100
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+.. ........+.+++.+||+.+|.+||++.+++.+
T Consensus 238 ---~~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 ---PTL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ---CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011 111233468899999999999999999999865
No 347
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=4e-32 Score=294.51 Aligned_cols=251 Identities=26% Similarity=0.407 Sum_probs=207.5
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLV 559 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv 559 (790)
....|.+...||+|.|+.|..|+.. +..||||.+++. ....+.+|+++|..++|||||+++.+.. +..+|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 4567899999999999999999875 899999998643 3345889999999999999999999887 6679999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
|||+.+|.+++++.+.++ +.......++.|+.+|++|||++++ ||||||++||||+.+..+||+|||++..+..
T Consensus 134 ~eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k~i---vHrdLk~eNilL~~~mnikIaDfgfS~~~~~- 207 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSKNI---VHRDLKAENILLDENMNIKIADFGFSTFFDY- 207 (596)
T ss_pred EEeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhcce---eccccchhhcccccccceeeeccccceeecc-
Confidence 999999999999998764 5558888999999999999999998 9999999999999999999999999998763
Q ss_pred CcccccccccCCCccchhcccCCCC-CchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
.......+|++.|.|||++.+..+ .+++|+||+|+++|-|+.|..||.... +..+..
T Consensus 208 -~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~--------lk~Lr~------------- 265 (596)
T KOG0586|consen 208 -GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN--------LKELRP------------- 265 (596)
T ss_pred -cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc--------cccccc-------------
Confidence 334566899999999999998876 578999999999999999999996422 111111
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccC
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~ 768 (790)
+.+-.+++- +.-...+..+++++++-.+|.+|++++++.+.-+.....
T Consensus 266 rvl~gk~rI--p~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~ 313 (596)
T KOG0586|consen 266 RVLRGKYRI--PFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLL 313 (596)
T ss_pred hheeeeecc--cceeechhHHHHHHhhccCccccCCHHHhhhhcccchhh
Confidence 111122221 223345677999999999999999999999887764333
No 348
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.98 E-value=2.3e-31 Score=285.23 Aligned_cols=250 Identities=25% Similarity=0.437 Sum_probs=191.6
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcC-CCCCcceEEEEec-CeEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVH-HLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~~~~lv~ 560 (790)
.++|++.+.||+|+||.||+|.+. +..+|||.++.. ...++..|+.++.+.. |+||+++++++.+ ...+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 356788999999999999999987 889999998642 3345667777777774 9999999999875 4589999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
||+.+ +|.+++.... ..+++..+.+++.+++.||+|||+ .++ +||||+|+||++++++.+||+|||++......
T Consensus 94 e~~~~-~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~i---~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELMST-CLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHGV---IHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred eccCc-CHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCE---ecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 99854 7777766533 368999999999999999999997 466 99999999999999999999999998765322
Q ss_pred CcccccccccCCCccchhcccCCC----CCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGE----VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~----~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
.. .....++..|+|||.+.... ++.++||||||+++|||++|+.||...... ............
T Consensus 169 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~--- 236 (296)
T cd06618 169 KA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEEP--- 236 (296)
T ss_pred Cc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCCC---
Confidence 21 12335778999999987554 788999999999999999999998542111 111111221110
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
+.. ........++.+++.+||+.||.+||++++++++.+.
T Consensus 237 -------~~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 237 -------PSL--PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred -------CCC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 000 0011234678999999999999999999999886653
No 349
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.98 E-value=2.3e-31 Score=279.28 Aligned_cols=239 Identities=24% Similarity=0.342 Sum_probs=184.2
Q ss_pred eeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHH-HhcCCCCCcceEEEEecC-eEEEEEEEecC
Q 046083 496 NKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVL-THVHHLNLVRLIGYCVEG-SLFLVYEYIEN 565 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l-~~l~h~niv~l~g~~~~~-~~~lv~e~~~~ 565 (790)
+.||+|+||.||+|... ++.+|+|.+.... ...+..|..++ ...+|+|++++++++.++ ..+++|||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57899999999999885 7899999986422 12344454444 445899999999988754 58999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
++|.+++.... .+++..+.+++.|++.||.|||+.++ +|+||+|+||++++++.+||+|||+++.... ..
T Consensus 82 ~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~i---~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~ 151 (260)
T cd05611 82 GDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRGI---IHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NK 151 (260)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeEECCCCcEEEeecccceeccc-----cc
Confidence 99999997643 58899999999999999999999998 9999999999999999999999999875432 22
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
...++..|++||.+.+..++.++||||||+++|||++|..||..... ...+........ ..
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--------~~~~~~~~~~~~-----------~~ 212 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP--------DAVFDNILSRRI-----------NW 212 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhccc-----------CC
Confidence 34578899999999888899999999999999999999999854321 111111111100 00
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.......++..+.+++.+||+.+|++||++.++.+.|.
T Consensus 213 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 213 PEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred CCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 01111234567899999999999999997765554443
No 350
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=3.8e-31 Score=289.57 Aligned_cols=258 Identities=22% Similarity=0.406 Sum_probs=192.7
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-------e
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-------S 555 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-------~ 555 (790)
++|...+.||+|+||.||+|... ++.+|+|++... ....+.+|++++++++|+||+++++++... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 94 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD 94 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence 78999999999999999999874 789999988632 234578899999999999999999987532 3
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
.++|+||+.. +|.+++. ..+++..+..++.|++.||+|||++++ +||||||+|||++.++.+||+|||+++.
T Consensus 95 ~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i---~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 95 FYLVMPYMQT-DLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGI---IHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred EEEEeccccc-CHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 6899999965 7776653 258899999999999999999999998 9999999999999999999999999886
Q ss_pred cccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcC-CCC
Q 046083 636 TEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQ-PDP 713 (790)
Q Consensus 636 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 713 (790)
.... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... .......+.. ...
T Consensus 167 ~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~--------~~~~~~~~~~~~~~ 234 (342)
T cd07879 167 ADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--------LDQLTQILKVTGVP 234 (342)
T ss_pred CCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHhcCCC
Confidence 4321 123457889999999876 4689999999999999999999999964321 1111111110 000
Q ss_pred hhhhh---------hhcC--CcC-CCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH--HHhhcc
Q 046083 714 REDLQ---------RLVD--PRL-GDDY---PIDSVRKMARLARACTQENPQLRPSMRAIVVA--LMTLSS 767 (790)
Q Consensus 714 ~~~l~---------~~~d--~~l-~~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~--L~~l~~ 767 (790)
...+. ..+. +.. .... .......+.+++.+||+.||++||+++|++.+ +.....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 235 GPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred CHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 00000 0000 000 0000 01234568899999999999999999999965 554433
No 351
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=2.6e-31 Score=284.30 Aligned_cols=240 Identities=24% Similarity=0.410 Sum_probs=190.7
Q ss_pred ceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCCh
Q 046083 495 GNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNL 568 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L 568 (790)
..+||+|+||.||++... ++.+++|++.. ...+.+.+|+.+++.++|+|++++++++.. ...+++|||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 368999999999999885 78999998753 234568899999999999999999998875 458999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 648 (790)
.+++... .+++.....++.+++.||+|||+.++ +|+||+|+||++++++.++|+|||++........ ......
T Consensus 105 ~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~gi---vH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~-~~~~~~ 177 (292)
T cd06657 105 TDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGV---IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-RRKSLV 177 (292)
T ss_pred HHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHEEECCCCCEEEcccccceecccccc-cccccc
Confidence 9988643 48999999999999999999999997 9999999999999999999999999875532221 122346
Q ss_pred cCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCC
Q 046083 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDD 728 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~ 728 (790)
++..|++||.+....++.++|+||||+++|||++|..||...... ...... . ....+.+..
T Consensus 178 ~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--------~~~~~~-~---------~~~~~~~~~- 238 (292)
T cd06657 178 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--------KAMKMI-R---------DNLPPKLKN- 238 (292)
T ss_pred cCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHH-H---------hhCCcccCC-
Confidence 788999999998888999999999999999999999998542211 111111 0 011111100
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 729 YPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 729 ~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.......+.+++.+||+.+|.+||++.+++.+
T Consensus 239 -~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 239 -LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred -cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 11234567899999999999999999999874
No 352
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=2.1e-31 Score=279.59 Aligned_cols=244 Identities=23% Similarity=0.441 Sum_probs=190.5
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh--------hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--------QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLV 559 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv 559 (790)
+|.+.+.||+|+||.||++... +...++|.++. ....++..|+.++++++|||++++++++.+ ...+++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4788899999999999999876 34455554432 223456778999999999999999998764 458999
Q ss_pred EEEecCCChhhhhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 560 YEYIENGNLNQHLRGS--GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~--~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
|||+++++|.+++... ....+++..++.++.+++.||.|||+.++ +|+||+|+||+++. +.++|+|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i---~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRI---LHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCc---cccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988742 23469999999999999999999999998 99999999999976 569999999987653
Q ss_pred cCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 638 VGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 638 ~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
... .......+++.|+|||.+.+..++.++|+||||+++|+|++|..||.... ............
T Consensus 157 ~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~------ 221 (260)
T cd08222 157 GSC-DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN--------FLSVVLRIVEGP------ 221 (260)
T ss_pred CCc-ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc--------HHHHHHHHHcCC------
Confidence 322 12223567889999999988889999999999999999999999984321 111111111110
Q ss_pred hhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 718 QRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 718 ~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
....+......+.+++.+||+.+|++||++.|++++
T Consensus 222 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 222 --------TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred --------CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 111233455678999999999999999999999864
No 353
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=2.9e-31 Score=281.90 Aligned_cols=258 Identities=27% Similarity=0.414 Sum_probs=195.2
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
|+..+.||+|++|.||++... ++.+++|.++.. ....+.+|++++++++|+|++++++++.. ...+++|||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 566789999999999999875 788999988643 23568889999999999999999998765 4589999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
++ +|.+++.... ..+++..+..++.+++.||.|||++++ +|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~~-~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGI---LHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RP 154 (283)
T ss_pred CC-CHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCe---eecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-cc
Confidence 76 8888887643 468999999999999999999999998 999999999999999999999999998664432 11
Q ss_pred ccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 644 HTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
.....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...... +........+..+. ...+..+.+
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~ 228 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-----DQLFKIFRTLGTPD-PEVWPKFTS 228 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHcCCCc-hHhcccchh
Confidence 2234577889999998876 7899999999999999999999988543321 00000001111100 000101000
Q ss_pred ---------CcCC----CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 723 ---------PRLG----DDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 723 ---------~~l~----~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+... ..........+.+++.+||+.||.+||++++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000 01112346788999999999999999999999864
No 354
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-33 Score=321.13 Aligned_cols=249 Identities=28% Similarity=0.420 Sum_probs=201.3
Q ss_pred HHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEE
Q 046083 487 KATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFL 558 (790)
Q Consensus 487 ~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~l 558 (790)
.-+-++.-..+||.|.||.||.|... |+..|+|-++.. ..+...+|+.++..++|||+|+.||+-.+. ..+|
T Consensus 1232 nV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~I 1311 (1509)
T KOG4645|consen 1232 NVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYI 1311 (1509)
T ss_pred cceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHH
Confidence 34456778899999999999999864 888999977642 234578899999999999999999998754 5889
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
.||||++|+|.+.++..+ -.++.....+..|++.|++|||++|+ |||||||.||||+.+|.+|++|||.|.....
T Consensus 1312 FMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gI---VHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGI---VHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCc---eecCCCccceeeecCCcEEeecccceeEecC
Confidence 999999999999998653 36666677788999999999999999 9999999999999999999999999997754
Q ss_pred CCccc---ccccccCCCccchhcccCCC---CCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 639 GSASV---HTRLVGTFGYMPPEYAQYGE---VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 639 ~~~~~---~~~~~gt~~y~aPE~~~~~~---~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
..... ....+||+-|||||++.+.. -..+.||||+|||++||+||+.||...+.. ....+...+..
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne------~aIMy~V~~gh-- 1458 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE------WAIMYHVAAGH-- 1458 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch------hHHHhHHhccC--
Confidence 43222 23568999999999997643 456899999999999999999999765432 11222222211
Q ss_pred ChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 713 PREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 713 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.+.+|.....+-.+++..||+.||++|.++.|++++
T Consensus 1459 -------------~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1459 -------------KPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred -------------CCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 134566677788999999999999999999887764
No 355
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=2.7e-31 Score=289.25 Aligned_cols=261 Identities=26% Similarity=0.398 Sum_probs=199.1
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC------eEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG------SLF 557 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------~~~ 557 (790)
+|.+.+.||+|+||.||+|... ++.+++|++... ..+.+.+|+++++.++|+||+++++++... ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788999999999999999975 789999988642 345788999999999999999999987643 479
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
++|||+.+ +|.+++.... .+++..++.++.+++.||+|||++++ +|+||||+|||++.++.++|+|||++....
T Consensus 81 lv~e~~~~-~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi---~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELMET-DLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANV---IHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchhh-hHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 99999985 8999887643 69999999999999999999999997 999999999999999999999999998765
Q ss_pred cCCc--ccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 638 VGSA--SVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 638 ~~~~--~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
.... .......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...... ............+...
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~ 229 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI-----DQLNLIVEVLGTPSEE 229 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH-----HHHHHHHHhcCCCChh
Confidence 4321 112334678899999999887 7899999999999999999999998654321 0011111111111000
Q ss_pred -------hhhhhhcCC-cCCCC-----CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 715 -------EDLQRLVDP-RLGDD-----YPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 715 -------~~l~~~~d~-~l~~~-----~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
....+.+.. ..... ........+.+++.+||+.+|++||++++++.+-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 230 DLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred HhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 000011100 00000 0112456789999999999999999999999863
No 356
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=7.8e-31 Score=287.23 Aligned_cols=258 Identities=22% Similarity=0.392 Sum_probs=194.4
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEecC------
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVEG------ 554 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~~------ 554 (790)
..++|++.+.||+|+||.||++... +..+|+|++... ..+.+.+|++++++++|+||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 3578999999999999999999875 789999988531 234678999999999999999999987532
Q ss_pred -eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 555 -SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 555 -~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
..++||||+ +++|.+++.. ..+++..+..++.|+++||+|||+.++ +||||||+||+++.++.++|+|||++
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi---~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGI---IHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEEcCCCCEEEeecccc
Confidence 358999998 6799888864 358999999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcC-C
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQ-P 711 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 711 (790)
...... .....+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||...... ......... .
T Consensus 166 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~--------~~~~~~~~~~~ 233 (343)
T cd07880 166 RQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL--------DQLMEIMKVTG 233 (343)
T ss_pred cccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHHhcC
Confidence 865322 123456889999999876 45889999999999999999999998643221 011111110 0
Q ss_pred CChhhh---------hhhcC--CcCCC----CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 712 DPREDL---------QRLVD--PRLGD----DYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 712 ~~~~~l---------~~~~d--~~l~~----~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.....+ ..... +.... .........+.+++.+|++.||++|||+.+++.+-..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~ 301 (343)
T cd07880 234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYF 301 (343)
T ss_pred CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccH
Confidence 000000 00000 00000 0111234568899999999999999999999965443
No 357
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=3.4e-32 Score=270.73 Aligned_cols=271 Identities=25% Similarity=0.359 Sum_probs=197.8
Q ss_pred cCcccceeeeecCceEEEEEEEC------CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEe--cCeE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR------GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCV--EGSL 556 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~------g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~--~~~~ 556 (790)
..|+....||+|.||.||+|... ...+|||+++.+ ......+|+.++++++|||++.+..++. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 46888999999999999999653 236899999754 2356788999999999999999988765 4568
Q ss_pred EEEEEEecCCChhhhhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC----CcEEEEE
Q 046083 557 FLVYEYIENGNLNQHLRGSG---KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN----FRAKVAD 629 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~---~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~----~~~kl~D 629 (790)
++++||.+. +|...++... ...++...+..|++||+.|+.|||++.+ +||||||.|||+..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWv---lHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWV---LHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhhe---eeccCCcceEEEeccCCccCeeEeec
Confidence 999999998 9998886432 2468888899999999999999999998 999999999999877 8999999
Q ss_pred eCCCcccccCCccc--ccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccc----cchHH
Q 046083 630 FGLAKLTEVGSASV--HTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITES----TGLVA 702 (790)
Q Consensus 630 fGla~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~----~~~~~ 702 (790)
||+++.+...-... ...++-|..|+|||.+.+. .|+.+.|||+.|||+.||+|-.+.|.......... .+...
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 99999876443222 2346779999999999875 69999999999999999999887776554322111 01111
Q ss_pred HHHHHHcCCCCh--hhhhhhcCC---------cCCCCCCH--------HHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 703 LFEEVLRQPDPR--EDLQRLVDP---------RLGDDYPI--------DSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 703 ~~~~~~~~~~~~--~~l~~~~d~---------~l~~~~~~--------~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
....++..+... ..+..+-+- ........ .-.....+|+..+|+.||.+|.|+++.+++.-
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~y 339 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPY 339 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccc
Confidence 111222221110 011111110 00000000 00112678999999999999999999988654
Q ss_pred h
Q 046083 764 T 764 (790)
Q Consensus 764 ~ 764 (790)
-
T Consensus 340 F 340 (438)
T KOG0666|consen 340 F 340 (438)
T ss_pred c
Confidence 4
No 358
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=2e-31 Score=287.33 Aligned_cols=263 Identities=29% Similarity=0.401 Sum_probs=191.9
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec--------
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-------- 553 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-------- 553 (790)
.++|++.+.||+|+||.||+|... ++.+++|.+... ....+.+|++++++++|+||+++++++.+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999985 788999987532 22457789999999999999999987642
Q ss_pred -CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCC
Q 046083 554 -GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGL 632 (790)
Q Consensus 554 -~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGl 632 (790)
...++||||+.+ +|...+.... ..+++..+..++.|+++||+|||+.++ +|+||||+||++++++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i---~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHI---LHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEECCCCCEEECcCcc
Confidence 136999999976 7777776532 369999999999999999999999998 9999999999999999999999999
Q ss_pred CcccccCCcc----------cccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchH
Q 046083 633 AKLTEVGSAS----------VHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701 (790)
Q Consensus 633 a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 701 (790)
++........ ......+++.|+|||.+.+. .++.++||||||+++|||++|++||...... ...
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-----~~~ 236 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-----DQL 236 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-----HHH
Confidence 9865432211 11224567889999988654 5789999999999999999999998643321 111
Q ss_pred HHHHHHHcCCCCh-----hhhhhhcCCcCCCCCC-------HHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 702 ALFEEVLRQPDPR-----EDLQRLVDPRLGDDYP-------IDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 702 ~~~~~~~~~~~~~-----~~l~~~~d~~l~~~~~-------~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
............. ..+....+.......+ ......+.+++.+||+.+|++|||+.|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1111111111000 0000000000000001 1122568899999999999999999998763
No 359
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=1.3e-30 Score=285.80 Aligned_cols=266 Identities=23% Similarity=0.355 Sum_probs=198.2
Q ss_pred CHHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec
Q 046083 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE 553 (790)
Q Consensus 481 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~ 553 (790)
..+++...+++|.+.+.||+|+||.||++... ++.+|+|+++.. ..+.+.+|++++++++|+||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 34566778899999999999999999999864 789999998632 23567889999999999999999998752
Q ss_pred -------CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEE
Q 046083 554 -------GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAK 626 (790)
Q Consensus 554 -------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~k 626 (790)
...+++++++ +++|.+++... .+++..+..++.|+++||+|||+.++ +||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~i---vH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADI---IHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCe---eecCCChHHEEEcCCCCEE
Confidence 2267788876 77998888643 48999999999999999999999998 9999999999999999999
Q ss_pred EEEeCCCcccccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHH
Q 046083 627 VADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFE 705 (790)
Q Consensus 627 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 705 (790)
|+|||+++..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..+ ....
T Consensus 161 l~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~----~~~-~~~~ 231 (345)
T cd07877 161 ILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI----DQL-KLIL 231 (345)
T ss_pred Eeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHH-HHHH
Confidence 9999998754321 223467889999998866 56889999999999999999999998543221 000 0000
Q ss_pred HHHcCCCChhhh--------hhh---cCCcCCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 706 EVLRQPDPREDL--------QRL---VDPRLGDDY---PIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 706 ~~~~~~~~~~~l--------~~~---~d~~l~~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
...... ..... ... +.......+ .......+.+++.+|++.||.+||++.+++.+-.
T Consensus 232 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 232 RLVGTP-GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred HHhCCC-CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 000000 00000 000 000000000 0113456889999999999999999999988654
No 360
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=5.1e-32 Score=265.14 Aligned_cols=247 Identities=24% Similarity=0.423 Sum_probs=189.9
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcC-CCCCcceEEEEe-cCeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVH-HLNLVRLIGYCV-EGSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~-h~niv~l~g~~~-~~~~~lv~e~ 562 (790)
+.+....||.|..|.|++++.. |...|||.+.. +..+.+...++++..-+ +|+||+.+||+. +.+.++.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 3455789999999999999987 68999999964 34455667777766654 899999999987 5568889998
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
|.. .+..++... +.++++.-+-++...++.||.||.++.. ++|||+||+|||+|+.|.+||||||++-.+-...
T Consensus 173 Ms~-C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~--viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk-- 246 (391)
T KOG0983|consen 173 MST-CAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK-- 246 (391)
T ss_pred HHH-HHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcc--eeecccCccceEEccCCCEEeecccccceeeccc--
Confidence 854 555555543 3468888889999999999999997653 4999999999999999999999999997664332
Q ss_pred cccccccCCCccchhcccC---CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 643 VHTRLVGTFGYMPPEYAQY---GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~---~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
-+++-.|-+.|||||.+.- ..|+-++||||||+.|+||.||+.||...... + .....++...
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td------F-e~ltkvln~e-------- 311 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD------F-EVLTKVLNEE-------- 311 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc------H-HHHHHHHhcC--------
Confidence 2345568889999999853 46889999999999999999999999764322 1 1111222211
Q ss_pred hcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 720 LVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 720 ~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
.|.|... ......+.+++..||+.|+.+||...+++++-
T Consensus 312 --PP~L~~~--~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 312 --PPLLPGH--MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred --CCCCCcc--cCcCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 1222211 22456799999999999999999999998753
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=6e-31 Score=286.23 Aligned_cols=263 Identities=25% Similarity=0.389 Sum_probs=197.3
Q ss_pred HHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec--C
Q 046083 484 ELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE--G 554 (790)
Q Consensus 484 ~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~--~ 554 (790)
++...+++|++.+.||+|+||.||++... ++.+|+|++.. ...+.+.+|++++++++|||++++++++.. .
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 34456789999999999999999999875 78899998753 234668899999999999999999998763 3
Q ss_pred eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
..++++||+ +++|.+++... .+++.....++.|++.||.|||+.++ +|+||+|+||++++++.++|+|||++.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~i---iH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGV---VHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEeECCCCCEEeCcccccc
Confidence 589999998 55898888643 47888889999999999999999998 999999999999999999999999987
Q ss_pred ccccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC-
Q 046083 635 LTEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD- 712 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 712 (790)
..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ............+.
T Consensus 157 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~-----~~~~~~~~~~~~~~~ 227 (328)
T cd07856 157 IQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV-----NQFSIITDLLGTPPD 227 (328)
T ss_pred ccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCCH
Confidence 54321 123456889999998765 56899999999999999999999998543221 01111111111110
Q ss_pred -------ChhhhhhhcCCcCCCCCC-----HHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 713 -------PREDLQRLVDPRLGDDYP-----IDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 713 -------~~~~l~~~~d~~l~~~~~-----~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
......-+..-......+ ......+.+++.+||+.+|++|||+++++.+-
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~ 289 (328)
T cd07856 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289 (328)
T ss_pred HHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 000000000000111111 12346789999999999999999999998863
No 362
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=7.5e-31 Score=286.44 Aligned_cols=261 Identities=26% Similarity=0.330 Sum_probs=192.6
Q ss_pred cCcc-cceeeeecCceEEEEEEEC--CceEEEEEeChhhH-----------------HHHHHHHHHHHhcCCCCCcceEE
Q 046083 490 NDFS-MGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS-----------------KEFLAELKVLTHVHHLNLVRLIG 549 (790)
Q Consensus 490 ~~f~-~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~-----------------~~~~~E~~~l~~l~h~niv~l~g 549 (790)
++|. +.+.||+|+||.||+|... ++.+|||.++.... ..+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4454 4577999999999999875 78999998864221 14678999999999999999999
Q ss_pred EEec-CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEE
Q 046083 550 YCVE-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVA 628 (790)
Q Consensus 550 ~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~ 628 (790)
++.. ...+++|||+. |+|.+++.... .+++.....++.|++.||+|||+.++ +|+||+|+||+++.++.++|+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i---~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWYF---MHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCe---ecccccHHHeEECCCCCEEEC
Confidence 8874 45899999997 59999987543 58999999999999999999999998 999999999999999999999
Q ss_pred EeCCCcccccCC-------------cccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCcccccccccc
Q 046083 629 DFGLAKLTEVGS-------------ASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETI 694 (790)
Q Consensus 629 DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~ 694 (790)
|||++....... ........++..|+|||.+.+. .++.++|+||||+++|||++|..||......
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~- 240 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI- 240 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 999997654110 0111123467889999998764 4689999999999999999999998654321
Q ss_pred ccccchHHHHHHHHcCCCChhhhhhhc------------CCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 695 TESTGLVALFEEVLRQPDPREDLQRLV------------DPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~l~~~~------------d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
+...........+.. ..+.... .+... .........+.+++.+||+.+|++|||++|++.+-
T Consensus 241 ----~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 241 ----DQLGRIFELLGTPNE-DNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred ----HHHHHHHHHhCCCch-hhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 111111111111111 0000000 00000 00112345688999999999999999999999755
Q ss_pred H
Q 046083 763 M 763 (790)
Q Consensus 763 ~ 763 (790)
+
T Consensus 315 ~ 315 (335)
T PTZ00024 315 Y 315 (335)
T ss_pred c
Confidence 4
No 363
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=9.6e-31 Score=277.84 Aligned_cols=238 Identities=24% Similarity=0.323 Sum_probs=182.6
Q ss_pred eeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHH---HHHhcCCCCCcceEEEEec-CeEEEEEEEec
Q 046083 497 KIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELK---VLTHVHHLNLVRLIGYCVE-GSLFLVYEYIE 564 (790)
Q Consensus 497 ~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~---~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~ 564 (790)
.||+|+||.||++... ++.+|+|.+.... ...+..|.. .++...|||++++++++.+ ...++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999874 7899999875321 122334433 4444579999999988774 55899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+++|.+++... ..+++..+..++.|++.||.|||+.++ +||||||+||+++.++.+||+|||++....... .
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i---~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---~ 152 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKK---P 152 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCE---EcCCCCHHHEEECCCCCEEEccCcCccccCccC---C
Confidence 99999988754 359999999999999999999999997 999999999999999999999999987543221 1
Q ss_pred cccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 645 TRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
....|+..|+|||.+.++ .++.++||||||+++|||++|+.||....... ......... ...
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~-----------~~~- 215 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTL-----------TMA- 215 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccc-----hHHHHHHhh-----------ccC-
Confidence 234689999999998754 68999999999999999999999986542211 000000000 001
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCC-----CHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRP-----SMRAIVVAL 762 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP-----t~~evl~~L 762 (790)
...+......+.+++.+|+..+|.+|| ++.+++++-
T Consensus 216 ---~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~ 256 (278)
T cd05606 216 ---VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHP 256 (278)
T ss_pred ---CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCc
Confidence 112223356789999999999999999 999998643
No 364
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=2e-31 Score=292.50 Aligned_cols=263 Identities=22% Similarity=0.402 Sum_probs=198.9
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-------eEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-------SLFL 558 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-------~~~l 558 (790)
+...+.||+|+||.||+|+.+ |+.+|||.++. ...+...+|+++|++++|+|||++++.-.+. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 344678999999999999975 99999999875 4456788999999999999999999876532 3689
Q ss_pred EEEEecCCChhhhhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEe--cCCC--cEEEEEeCCC
Q 046083 559 VYEYIENGNLNQHLRGSG-KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILI--DKNF--RAKVADFGLA 633 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl--~~~~--~~kl~DfGla 633 (790)
+||||.+|+|+..|+... ...|++.+.+.+..+++.||.|||+++| +||||||.||++ .++| ..||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~I---vHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGI---VHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCc---eeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 999999999999998753 3579999999999999999999999998 999999999988 3334 4699999999
Q ss_pred cccccCCcccccccccCCCccchhccc-CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHH-HHHHHHcCC
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVA-LFEEVLRQP 711 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~~ 711 (790)
+.++.+. ....+.||..|++||+.. ...|+.-.|.|||||++||..||..||....... .... .+....+.+
T Consensus 172 rel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk----~~~~~~~~~~tkkp 245 (732)
T KOG4250|consen 172 RELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPK----NNKEIMWHIITKKP 245 (732)
T ss_pred ccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc----ccchhhhhhhccCC
Confidence 9876443 567789999999999998 4889999999999999999999999997644321 1111 122222222
Q ss_pred CChh-----------hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC--CHHHHHHHHHhh
Q 046083 712 DPRE-----------DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRP--SMRAIVVALMTL 765 (790)
Q Consensus 712 ~~~~-----------~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP--t~~evl~~L~~l 765 (790)
..-. .+...+.. .-.........+-..+..++..+|++|. ...+....+..+
T Consensus 246 ~~v~i~~~~~eNgpv~~s~~lP~--p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dI 310 (732)
T KOG4250|consen 246 SGVAIGAQEEENGPVEWSSTLPQ--PNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDI 310 (732)
T ss_pred CceeEeeecccCCceeeeccCCC--cccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHH
Confidence 1100 00000000 0011234455677788888999999998 555555555444
No 365
>PRK06347 autolysin; Reviewed
Probab=99.97 E-value=6.5e-31 Score=295.49 Aligned_cols=241 Identities=17% Similarity=0.143 Sum_probs=172.9
Q ss_pred cceeEEeccCCchHHHHhhhcCCCChHHHHHHccCCCCCCCCCCcEEEEEeeccCCCC----c--------c-cCCceeE
Q 046083 76 HTFTYETQFGDTYEKVASFAFANLTTEDWVRRVNIYEPTRIPDYAFINVTVNCSCGDR----H--------I-SRDYGLF 142 (790)
Q Consensus 76 ~~~~Y~V~~GDTl~~IA~~~~~~~~t~~~l~~~N~~~~~~l~~Gq~l~iP~~~~~~~~----~--------~-~~~~~~~ 142 (790)
....|+|++||||+.|| ++|+. ++++|+++|.+..+.|.+||+|.||........ . . .......
T Consensus 329 ~~~~Y~V~sGDTL~~IA-~rygv--Sv~eL~~~N~l~~d~L~~Gq~L~VP~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~ 405 (592)
T PRK06347 329 NAKIYTVVKGDSLWRIA-NNHKV--TVANLKAWNNLKSDFIYPGQKLKVSAGSTTSDTNTSKPSTGTSTSKPSTGTSTNA 405 (592)
T ss_pred CceEEEeCCCCCHHHHH-HHhCC--CHHHHHHHhCCCccccccCcEEEEeccccccccccccccccccccccccccccCc
Confidence 45689999999999999 78976 999999999888899999999999974211000 0 0 0001123
Q ss_pred EEeecCCCCCHHHHHHHhCCChHHHhhhCCC-CcccCCcceEEeechhhHHHHHHHHHHHHhhhhhccccccccchhhhh
Q 046083 143 TTYPLRPAQNLSSVAAEAGVAPQSLQRYNPG-TNFSAGTGLVFVPARVFELKLALLLVLAFFCARRRVEAVAECSKGCDL 221 (790)
Q Consensus 143 ~~y~v~~gd~l~~ia~~~~~~~~~l~~~N~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (790)
..|+|++||+|+.||++||+++++|+++|+. .+.+..++.+.||....... ... ................ .
T Consensus 406 ~~ytVk~GDTL~sIA~kygVSv~~L~~~N~l~s~~L~~Gq~L~IP~~~~~~~-----~t~-~~s~~~~~~k~~s~~~--~ 477 (592)
T PRK06347 406 KVYTVVKGDSLWRIANNNKVTIANLKSWNNLKSDFIYPGQKLKVSAGSTSNT-----NTS-KPSTNTNTSKPSTNTN--T 477 (592)
T ss_pred eeEEecCCCCHHHHHHHhCCCHHHHHHHhCCCcceeccCcEEEEecCCcccc-----ccc-cccccccccccccccc--c
Confidence 5799999999999999999999999999983 34566777777885321000 000 0000000000000000 1
Q ss_pred hheeeecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEeccccccCCC---------ceeeeeEEEEeccC
Q 046083 222 ALASYYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVPFSCNCIQN---------KFLGHSFSYKVKSG 292 (790)
Q Consensus 222 ~~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip~~~~~~~~---------~~~~~~~~y~V~~g 292 (790)
....|+|++||||+.||++||+++++|+++| ++. .+.|++||.|.||........ ........|+|++|
T Consensus 478 ~~~~YtVk~GDTL~sIAkkygVSv~~L~~~N-~l~-s~~L~~GQ~L~Ip~~~~~s~~~t~~~s~~~~~~~~~~~Y~Vk~G 555 (592)
T PRK06347 478 NAKVYTVAKGDSLWRIANNNKVTIANLKSWN-NLK-SDFIYPGQKLKVSAGSTTNNTNTAKPSTNKPSNSTVKTYTVKKG 555 (592)
T ss_pred cceeeeecCCCCHHHHHHHHCCCHHHHHHhc-CCC-cccccCCcEEEEecCcccccccccCCccCCccCccceeeecCCC
Confidence 2347999999999999999999999999999 674 468999999999985432110 00112357999999
Q ss_pred chHHHHHHHhhcccccHHHHHhcCCCCCCCCCCCCcEEEEe
Q 046083 293 NTYKRIAELIYANLTTLDWLKSSNAYDENHTPDVSSSVNVI 333 (790)
Q Consensus 293 Dtl~~IA~~~~~~l~~~~~l~~~N~~~~~~~~~~Gq~l~ip 333 (790)
||||.|| ++|. +++++|++||++.++.|.+ ||+|.|+
T Consensus 556 DTL~sIA-~Kyg--vSv~~L~~~N~L~~~~L~~-GQ~L~I~ 592 (592)
T PRK06347 556 DSLWAIS-RQYK--TTVDNIKAWNKLTSNMIHV-GQKLTIK 592 (592)
T ss_pred CcHHHHH-HHhC--CCHHHHHHhcCCCcccCCC-CCEEecC
Confidence 9999999 5565 7889999999998887777 9999985
No 366
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=5.6e-31 Score=288.25 Aligned_cols=257 Identities=25% Similarity=0.353 Sum_probs=189.6
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEec-----------
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCVE----------- 553 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~~----------- 553 (790)
.+|.+.+.||.|+||.||+|... +..+++|.+.. ...+.+.+|++++++++||||+++++++..
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 67999999999999999999885 78999998854 334568899999999999999999876542
Q ss_pred ----CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC-CCcEEEE
Q 046083 554 ----GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK-NFRAKVA 628 (790)
Q Consensus 554 ----~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~-~~~~kl~ 628 (790)
...++||||++ ++|.+++... .+++..+..++.|++.||.|||+.++ +||||||+||+++. ++.+||+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~gi---vH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANV---LHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEEEcCCCceEEEC
Confidence 23689999997 4898888642 48899999999999999999999998 99999999999974 5678999
Q ss_pred EeCCCcccccCCcc--cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHH
Q 046083 629 DFGLAKLTEVGSAS--VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFE 705 (790)
Q Consensus 629 DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 705 (790)
|||+++........ ......++..|+|||.+.. ..++.++|||||||++|||++|+.||....... ...
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~--------~~~ 229 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE--------QMQ 229 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHH
Confidence 99999765322111 1122357889999998754 568889999999999999999999996443210 001
Q ss_pred HHHcC-CCChh-hhh-------hhcC-CcCCCCC-----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 706 EVLRQ-PDPRE-DLQ-------RLVD-PRLGDDY-----PIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 706 ~~~~~-~~~~~-~l~-------~~~d-~~l~~~~-----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..... +.... ... .... ....... ......++.+++.+||+.||++|||++|++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 230 LILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 11100 00000 000 0000 0000000 11234568899999999999999999999864
No 367
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=1.1e-30 Score=277.18 Aligned_cols=258 Identities=27% Similarity=0.402 Sum_probs=194.2
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
|+..+.||+|+||.||+|... ++.+++|.+... ..+.+..|++++++++|+|++++++++.+ +..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566789999999999999886 789999988753 23567889999999999999999998775 4589999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~ 643 (790)
. ++|.+++.... ..+++..+.+++.+++.||+|||++++ +|+||+|+||++++++.++|+|||++........ .
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i---~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-~ 154 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRI---LHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-T 154 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCc---ccCCCChheEEEcCCCCEEEecCCcccccCCCcc-c
Confidence 8 49999998653 358999999999999999999999998 9999999999999999999999999986543221 1
Q ss_pred ccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC---------
Q 046083 644 HTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP--------- 713 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 713 (790)
.....++..|+|||.+... .++.++||||||+++|||++|+.||...... ...............
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-----DQLFKIFQILGTPTEESWPGVTKL 229 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-----HHHHHHHHHhCCCcHHHHHhhccc
Confidence 2223457789999998766 7899999999999999999999888553321 000001111111000
Q ss_pred ---hhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 714 ---REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 714 ---~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...+............ ......+.+++.+||+.+|++||++++++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 230 PDYKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 0000000000000001 1225678999999999999999999999864
No 368
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.9e-30 Score=270.33 Aligned_cols=231 Identities=28% Similarity=0.437 Sum_probs=188.2
Q ss_pred eeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCCh
Q 046083 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNL 568 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L 568 (790)
||+|+||.||++... ++.+++|.+... ....+..|++++++++|+|++++++.+.. ...+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999886 789999988643 33478899999999999999999987764 458999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 648 (790)
.+++.... .+++.....++.+++.||.|||+.++ +|+||+|+||+++.++.++|+|||++....... .......
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~---~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGI---IYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFC 154 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCc---eecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCc
Confidence 99998653 58999999999999999999999998 999999999999999999999999998654322 1223456
Q ss_pred cCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCC
Q 046083 649 GTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDD 728 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~ 728 (790)
++..|++||...+...+.++|+||||+++|||++|+.||..... ......... . ...
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~-------------~--~~~ 211 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILK-------------D--PLR 211 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhc-------------C--CCC
Confidence 78899999999988899999999999999999999999854321 111111111 0 112
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHH
Q 046083 729 YPIDSVRKMARLARACTQENPQLRPSMRA 757 (790)
Q Consensus 729 ~~~~~~~~l~~li~~Cl~~dP~~RPt~~e 757 (790)
.+...+..+.+++.+||..||++||++.+
T Consensus 212 ~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 212 FPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 23333567889999999999999999943
No 369
>PRK06347 autolysin; Reviewed
Probab=99.97 E-value=2.1e-30 Score=291.31 Aligned_cols=235 Identities=17% Similarity=0.184 Sum_probs=174.5
Q ss_pred HhhhcccCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCCCeEEeeeecccCC--------C--------CCcccce
Q 046083 15 ALASYYVWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSDTRISIPFSCDCLN--------G--------DFLGHTF 78 (790)
Q Consensus 15 ~~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g~~l~ip~~~~~~~--------~--------~~~~~~~ 78 (790)
....|+|++||||+.||++||+++++|+++| ++.. +.|.+||.|+||....... . .......
T Consensus 329 ~~~~Y~V~sGDTL~~IA~rygvSv~eL~~~N-~l~~-d~L~~Gq~L~VP~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~ 406 (592)
T PRK06347 329 NAKIYTVVKGDSLWRIANNHKVTVANLKAWN-NLKS-DFIYPGQKLKVSAGSTTSDTNTSKPSTGTSTSKPSTGTSTNAK 406 (592)
T ss_pred CceEEEeCCCCCHHHHHHHhCCCHHHHHHHh-CCCc-cccccCcEEEEeccccccccccccccccccccccccccccCce
Confidence 3457999999999999999999999999999 5754 7899999999997421100 0 0012235
Q ss_pred eEEeccCCchHHHHhhhcCCCChHHHHHHccCCCCCCCCCCcEEEEEeeccCCCC---c---------ccCCceeEEEee
Q 046083 79 TYETQFGDTYEKVASFAFANLTTEDWVRRVNIYEPTRIPDYAFINVTVNCSCGDR---H---------ISRDYGLFTTYP 146 (790)
Q Consensus 79 ~Y~V~~GDTl~~IA~~~~~~~~t~~~l~~~N~~~~~~l~~Gq~l~iP~~~~~~~~---~---------~~~~~~~~~~y~ 146 (790)
.|+|++||||+.|| ++|+. ++..|+++|.+..+.|.+||+|.||........ . ..........|+
T Consensus 407 ~ytVk~GDTL~sIA-~kygV--Sv~~L~~~N~l~s~~L~~Gq~L~IP~~~~~~~~t~~~s~~~~~~k~~s~~~~~~~~Yt 483 (592)
T PRK06347 407 VYTVVKGDSLWRIA-NNNKV--TIANLKSWNNLKSDFIYPGQKLKVSAGSTSNTNTSKPSTNTNTSKPSTNTNTNAKVYT 483 (592)
T ss_pred eEEecCCCCHHHHH-HHhCC--CHHHHHHHhCCCcceeccCcEEEEecCCcccccccccccccccccccccccccceeee
Confidence 79999999999999 78976 889999999777789999999999974211000 0 000111235799
Q ss_pred cCCCCCHHHHHHHhCCChHHHhhhCCC-CcccCCcceEEeechhhHHHHHHHHHHHHhhhhhccccccccchhhhhhhee
Q 046083 147 LRPAQNLSSVAAEAGVAPQSLQRYNPG-TNFSAGTGLVFVPARVFELKLALLLVLAFFCARRRVEAVAECSKGCDLALAS 225 (790)
Q Consensus 147 v~~gd~l~~ia~~~~~~~~~l~~~N~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (790)
|++||||+.||++||+++++|+++|+. .+.+..++.+.||...... ....... ...+. .......
T Consensus 484 Vk~GDTL~sIAkkygVSv~~L~~~N~l~s~~L~~GQ~L~Ip~~~~~s-----------~~~t~~~-s~~~~--~~~~~~~ 549 (592)
T PRK06347 484 VAKGDSLWRIANNNKVTIANLKSWNNLKSDFIYPGQKLKVSAGSTTN-----------NTNTAKP-STNKP--SNSTVKT 549 (592)
T ss_pred ecCCCCHHHHHHHHCCCHHHHHHhcCCCcccccCCcEEEEecCcccc-----------cccccCC-ccCCc--cCcccee
Confidence 999999999999999999999999983 3456778888888542100 0000000 00000 0112457
Q ss_pred eecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEec
Q 046083 226 YYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVP 270 (790)
Q Consensus 226 y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip 270 (790)
|+|++|||||.||++|||++++|+++| ++. .+.|++||.|.|+
T Consensus 550 Y~Vk~GDTL~sIA~KygvSv~~L~~~N-~L~-~~~L~~GQ~L~I~ 592 (592)
T PRK06347 550 YTVKKGDSLWAISRQYKTTVDNIKAWN-KLT-SNMIHVGQKLTIK 592 (592)
T ss_pred eecCCCCcHHHHHHHhCCCHHHHHHhc-CCC-cccCCCCCEEecC
Confidence 999999999999999999999999999 784 4679999999985
No 370
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=4.9e-30 Score=303.00 Aligned_cols=140 Identities=29% Similarity=0.472 Sum_probs=126.4
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~ 560 (790)
++|.+.++||+|+||.||+|... ++.||||+++.. ....+..|+.++..++|+||+++++++.. ...|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 67899999999999999999987 889999998642 23568899999999999999999987764 5689999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
||+.+++|.+++...+ .+++..+++++.|++.||.|||.+++ +||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~gI---iHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHGI---IHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCE---EeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997643 48899999999999999999999987 999999999999999999999999986
No 371
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=5.1e-30 Score=279.51 Aligned_cols=261 Identities=28% Similarity=0.374 Sum_probs=191.3
Q ss_pred CcccceeeeecCceEEEEEEEC----CceEEEEEeChh-----hHHHHHHHHHHHHhc-CCCCCcceEEEEec-----Ce
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR----GEKAAIKKMDMQ-----ASKEFLAELKVLTHV-HHLNLVRLIGYCVE-----GS 555 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~----g~~vavK~~~~~-----~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-----~~ 555 (790)
+|++.+.||+|+||.||++... +..+|+|++... ..+.+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4788999999999999999986 458999987632 235678899999999 59999999987532 23
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
.++++||+. ++|.+++... ..+++..+..++.|++.||+|||+.++ +||||||+|||++.++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gi---vH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANV---LHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 688889886 5899988754 358999999999999999999999998 9999999999999999999999999986
Q ss_pred cccCCcc---cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCC
Q 046083 636 TEVGSAS---VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQP 711 (790)
Q Consensus 636 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (790)
....... ......|+..|+|||.+.+ ..++.++|+||||+++|+|++|..||...... ............+
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-----~~~~~~~~~~~~~ 229 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-----DQLNQILQVLGTP 229 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-----HHHHHHHHHhCCC
Confidence 5432211 1223568899999998765 46899999999999999999999998653311 0011011111100
Q ss_pred CChhhhhhhcCC-----------cCCCC---CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 712 DPREDLQRLVDP-----------RLGDD---YPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 712 ~~~~~l~~~~d~-----------~l~~~---~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
..+.+..+..+ .-... ........+.+++.+|++.+|++|||+.+++..=+
T Consensus 230 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~ 294 (332)
T cd07857 230 -DEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPY 294 (332)
T ss_pred -CHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence 00011110000 00000 01123457889999999999999999999986543
No 372
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=4.7e-31 Score=303.19 Aligned_cols=247 Identities=31% Similarity=0.494 Sum_probs=182.6
Q ss_pred HHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-------
Q 046083 487 KATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE------- 553 (790)
Q Consensus 487 ~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~------- 553 (790)
+-.++|+..+.||+||||.||+++.+ |..+|||++... ......+|+..|.+++|||||++|..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 44567888899999999999999876 999999998744 23457889999999999999975421100
Q ss_pred --------------------------------------------------------------------------------
Q 046083 554 -------------------------------------------------------------------------------- 553 (790)
Q Consensus 554 -------------------------------------------------------------------------------- 553 (790)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ---------------------------------CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 046083 554 ---------------------------------GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600 (790)
Q Consensus 554 ---------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH 600 (790)
.-+|+=||||+...|.++++.+.... .....++++++|++||.|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHH
Confidence 00355678888877777776543211 46677999999999999999
Q ss_pred hCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc----------------cCCcc-cccccccCCCccchhcccCC-
Q 046083 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE----------------VGSAS-VHTRLVGTFGYMPPEYAQYG- 662 (790)
Q Consensus 601 ~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~----------------~~~~~-~~~~~~gt~~y~aPE~~~~~- 662 (790)
+.++ |||||||.||+||++..+||+|||+|.... .+... ..+..+||.-|+|||++.+.
T Consensus 715 ~~gi---IHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQGI---IHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCce---eeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 9997 999999999999999999999999998621 00111 23457899999999999765
Q ss_pred --CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCC--CCCHHHHHHHH
Q 046083 663 --EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGD--DYPIDSVRKMA 738 (790)
Q Consensus 663 --~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~--~~~~~~~~~l~ 738 (790)
.|+.|+|+||+||||+||+. ||....+. .. + +..+-++.+.. .+..+....=.
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER-------a~----i---------L~~LR~g~iP~~~~f~~~~~~~e~ 848 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMER-------AS----I---------LTNLRKGSIPEPADFFDPEHPEEA 848 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHH-------HH----H---------HHhcccCCCCCCcccccccchHHH
Confidence 49999999999999999994 45332221 11 1 11111222211 12233344557
Q ss_pred HHHHHccccCCCCCCCHHHHHH
Q 046083 739 RLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 739 ~li~~Cl~~dP~~RPt~~evl~ 760 (790)
.+|++|++.||.+|||+.|++.
T Consensus 849 slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 849 SLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHHHhcCCCccCCCHHHHhh
Confidence 8999999999999999999875
No 373
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-30 Score=290.50 Aligned_cols=257 Identities=25% Similarity=0.418 Sum_probs=208.9
Q ss_pred CHHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--hhHHHHHHHHHHHHhc-CCCCCcceEEEEe---
Q 046083 481 SYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFLAELKVLTHV-HHLNLVRLIGYCV--- 552 (790)
Q Consensus 481 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~--- 552 (790)
.++.+..-++.|++.+.||.|.+|.||+++.. ++..|+|++.. +..++...|.++|+.. .|||++.+||++.
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 34455556778999999999999999999764 78888888875 4457788899999988 6999999999875
Q ss_pred ---cCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEE
Q 046083 553 ---EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVAD 629 (790)
Q Consensus 553 ---~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~D 629 (790)
++.+|||||||.+|+..|++.......+.|..+..|++++++||++||.+.+ +|||||-.|||++.++.+||+|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkv---iHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKV---IHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcce---eeecccCceEEEeccCcEEEee
Confidence 3469999999999999999987666789999999999999999999999998 9999999999999999999999
Q ss_pred eCCCcccccCCcccccccccCCCccchhcccCC-----CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHH
Q 046083 630 FGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG-----EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALF 704 (790)
Q Consensus 630 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 704 (790)
||.+..++..-. ......||+.|||||++... .|+.++|+||||++..||--|.+|+....+.
T Consensus 167 FGvSaQldsT~g-rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm----------- 234 (953)
T KOG0587|consen 167 FGVSAQLDSTVG-RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM----------- 234 (953)
T ss_pred eeeeeeeecccc-cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-----------
Confidence 999987654332 23346899999999999643 4788999999999999999999998765542
Q ss_pred HHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 705 EEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 705 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..++.-+.. -.|.+ .-+..-..++.++|..||..|-++||++.+++++
T Consensus 235 raLF~IpRN-------PPPkL--krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 235 RALFLIPRN-------PPPKL--KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred hhhccCCCC-------CCccc--cchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 111111110 01111 2244556789999999999999999999998764
No 374
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=2.4e-30 Score=283.39 Aligned_cols=259 Identities=24% Similarity=0.380 Sum_probs=194.2
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-C-----
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-G----- 554 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~----- 554 (790)
..++|++.+.||+|+||.||+|... +..+|+|++.. ...+.+.+|+.++++++|+|++++++++.. .
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3578999999999999999999986 78899998763 233557789999999999999999886642 2
Q ss_pred -eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 555 -SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 555 -~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
..++|+||+ +++|.+++.. ..+++..+..++.++++||+|||+.++ +|+||+|+||++++++.++|+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi---~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGI---IHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCCHHHeEECCCCCEEEcccccc
Confidence 279999998 5699998875 358999999999999999999999998 99999999999999999999999999
Q ss_pred cccccCCcccccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 634 KLTEVGSASVHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 634 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
...... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ............+.
T Consensus 166 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-----~~~~~i~~~~~~~~ 236 (343)
T cd07851 166 RHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-----DQLKRIMNLVGTPD 236 (343)
T ss_pred cccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHHhcCCCC
Confidence 865322 223457889999999865 36789999999999999999999998643221 00000001111000
Q ss_pred -------ChhhhhhhcCC---cCCCCC---CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 713 -------PREDLQRLVDP---RLGDDY---PIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 713 -------~~~~l~~~~d~---~l~~~~---~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
.......++.. .....+ .......+.+++.+||+.+|++|||+.||+++-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~ 299 (343)
T cd07851 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHP 299 (343)
T ss_pred HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCC
Confidence 00011111110 000000 012356789999999999999999999998753
No 375
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3e-31 Score=272.01 Aligned_cols=268 Identities=21% Similarity=0.301 Sum_probs=204.7
Q ss_pred ccCHHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--hhHHHHHHHHHHHHhcCC--C----CCcceE
Q 046083 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFLAELKVLTHVHH--L----NLVRLI 548 (790)
Q Consensus 479 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--~~~~~~~~E~~~l~~l~h--~----niv~l~ 548 (790)
.+...|.. +++|.+..++|+|.||.|-...+. +..+|||+++. ...+.-.-|+++|+++.+ | -+|.+.
T Consensus 80 v~~~gD~l--~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~ 157 (415)
T KOG0671|consen 80 VYQVGDIL--TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMR 157 (415)
T ss_pred EEEecccc--ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence 34434443 788999999999999999998776 67899999874 334556779999999932 2 256666
Q ss_pred EEEe-cCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC------
Q 046083 549 GYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK------ 621 (790)
Q Consensus 549 g~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~------ 621 (790)
+|+. .++.++|+|.+ |.+++++|..++..+++...+..++.|++++++|||+.++ +|.||||+|||+.+
T Consensus 158 ~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl---~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 158 DWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKL---THTDLKPENILFVSSEYFKT 233 (415)
T ss_pred hhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcce---eecCCChheEEEeccceEEE
Confidence 7665 67899999998 5599999999888899999999999999999999999998 99999999999932
Q ss_pred --------------CCcEEEEEeCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccc
Q 046083 622 --------------NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAV 687 (790)
Q Consensus 622 --------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~ 687 (790)
+..+|++|||.|....... ...+.|..|+|||++.+..++.++||||+||||.||.+|...|
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LF 309 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLF 309 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceec
Confidence 3468999999998754332 4467799999999999999999999999999999999999888
Q ss_pred cccccccccccchHHHHHHHHcCCCChhhhhhh-------------------------cCCcC----CCCCCHHHHHHHH
Q 046083 688 VKTNETITESTGLVALFEEVLRQPDPREDLQRL-------------------------VDPRL----GDDYPIDSVRKMA 738 (790)
Q Consensus 688 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------------------------~d~~l----~~~~~~~~~~~l~ 738 (790)
...+.. ....+.+.++. +.+...+.+. .++.. .......+..+|.
T Consensus 310 qtHen~-----EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf 383 (415)
T KOG0671|consen 310 QTHENL-----EHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF 383 (415)
T ss_pred ccCCcH-----HHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence 654421 22233333333 2211111111 11000 0011235667899
Q ss_pred HHHHHccccCCCCCCCHHHHHHHH
Q 046083 739 RLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 739 ~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
+|+++||..||.+|+|+.|++++-
T Consensus 384 DLl~~mL~fDP~~RiTl~EAL~Hp 407 (415)
T KOG0671|consen 384 DLLRRMLEFDPARRITLREALSHP 407 (415)
T ss_pred HHHHHHHccCccccccHHHHhcCH
Confidence 999999999999999999998753
No 376
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-31 Score=271.66 Aligned_cols=262 Identities=26% Similarity=0.439 Sum_probs=206.8
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh------HHHHHHHHHHHHhc-CCCCCcceEEEEe-cCeEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA------SKEFLAELKVLTHV-HHLNLVRLIGYCV-EGSLFL 558 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~------~~~~~~E~~~l~~l-~h~niv~l~g~~~-~~~~~l 558 (790)
..+|.++..||+|+||.|..|..+ .+.+|||+++... .+--+.|-++|.-. +-|.+++++.++. -+.+|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 347889999999999999999987 4679999987532 23345566676665 5788999988776 456999
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
||||+.||+|--+++.-++ +.++.+..++.+||-||-+||+++| +.||||.+||+||.+|++||+|||+.+.--.
T Consensus 428 VMEyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~kgI---iYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSKGI---IYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcCCe---eeeeccccceEeccCCceEeeeccccccccc
Confidence 9999999999999988764 7788889999999999999999998 9999999999999999999999999985432
Q ss_pred CCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
.. ......+||+.|+|||.+....|+.+.|+|||||+||||+.|++||...++ ..++..+++
T Consensus 503 ~~-~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE--------~elF~aI~e--------- 564 (683)
T KOG0696|consen 503 DG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--------DELFQAIME--------- 564 (683)
T ss_pred CC-cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHH---------
Confidence 22 223458999999999999999999999999999999999999999976443 233444433
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccCCccCCcCCcccccccccccc
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSSSEDWDIGSFYENQGLDSLMS 788 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~~~~~~~~~~~~~~~~~~~~~ 788 (790)
... .+|...+.+...+....+...|.+|.... .....+...+.|+..-+|.+++.
T Consensus 565 ----hnv--syPKslSkEAv~ickg~ltK~P~kRLGcg---------~~ge~di~~H~FFR~iDWek~E~ 619 (683)
T KOG0696|consen 565 ----HNV--SYPKSLSKEAVAICKGLLTKHPGKRLGCG---------PEGERDIREHPFFRRIDWEKLER 619 (683)
T ss_pred ----ccC--cCcccccHHHHHHHHHHhhcCCccccCCC---------CccccchhhCcchhhccHHHHhh
Confidence 222 45666677788899999999999994321 11123445666777777766653
No 377
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-31 Score=301.99 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=207.7
Q ss_pred ccCHHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEE-
Q 046083 479 EFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIG- 549 (790)
Q Consensus 479 ~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g- 549 (790)
.-...++.-..++|.+.+.||+|+||.|..++.+ ++.+|.|+++. ....-|..|-++|..-+.+-|+.++-
T Consensus 64 v~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA 143 (1317)
T KOG0612|consen 64 VKKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA 143 (1317)
T ss_pred HHHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH
Confidence 3455677777889999999999999999999986 78899999875 23345888999999889999999964
Q ss_pred EEecCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEE
Q 046083 550 YCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVAD 629 (790)
Q Consensus 550 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~D 629 (790)
|..+..+|+|||||+||+|-.+|...+ .+++..+..++..++.||.-||+.|+ |||||||+|||||..|++||+|
T Consensus 144 FQD~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgy---VHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 144 FQDERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGY---VHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred hcCccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccc---eeccCCcceeEecccCcEeecc
Confidence 445667999999999999999999876 58889999999999999999999998 9999999999999999999999
Q ss_pred eCCCcccccCCcccccccccCCCccchhccc----C-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHH
Q 046083 630 FGLAKLTEVGSASVHTRLVGTFGYMPPEYAQ----Y-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALF 704 (790)
Q Consensus 630 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 704 (790)
||.+..+...+.-.....+|||-|.+||+++ + +.|+..+|+||+||++|||+.|..||... .++..+
T Consensus 219 FGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad--------slveTY 290 (1317)
T KOG0612|consen 219 FGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD--------SLVETY 290 (1317)
T ss_pred chhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH--------HHHHHH
Confidence 9999888766665666789999999999985 2 57899999999999999999999999542 234444
Q ss_pred HHHHcCCCChhhhhhhcCCcCCCCCC--HHHHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 046083 705 EEVLRQPDPREDLQRLVDPRLGDDYP--IDSVRKMARLARACTQENPQLRPS---MRAIVVA 761 (790)
Q Consensus 705 ~~~~~~~~~~~~l~~~~d~~l~~~~~--~~~~~~l~~li~~Cl~~dP~~RPt---~~evl~~ 761 (790)
..++... -.-.|| .+.+.+..+||++.+. +|+.|-. ++++-.+
T Consensus 291 ~KIm~hk-------------~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 291 GKIMNHK-------------ESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred HHHhchh-------------hhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 4444331 112233 3456777888888775 5777766 6666543
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=9.4e-31 Score=259.48 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=197.5
Q ss_pred HhcCcccc-eeeeecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhc-CCCCCcceEEEEec---C--eEEE
Q 046083 488 ATNDFSMG-NKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHV-HHLNLVRLIGYCVE---G--SLFL 558 (790)
Q Consensus 488 ~~~~f~~~-~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~---~--~~~l 558 (790)
.+++|++. ++||-|-.|.|-.+..+ ++++|+|.+... ....+|+++.-.. .|||||.+++++.+ + -+.+
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi 136 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI 136 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence 35666554 57899999999988776 889999988643 2345677765555 69999999998763 2 2689
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC---CCcEEEEEeCCCcc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFGLAKL 635 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~---~~~~kl~DfGla~~ 635 (790)
|||.|+||.|+..+..++...+++.++..|+.+|+.|+.|||+.+| .||||||+|+|... |-.+||+|||+|+.
T Consensus 137 VmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nI---AHRDlKpENLLyt~t~~na~lKLtDfGFAK~ 213 (400)
T KOG0604|consen 137 VMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNI---AHRDLKPENLLYTTTSPNAPLKLTDFGFAKE 213 (400)
T ss_pred eeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcch---hhccCChhheeeecCCCCcceEecccccccc
Confidence 9999999999999999988899999999999999999999999998 99999999999954 45789999999996
Q ss_pred cccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 636 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
.... ......+.|+.|.|||++-..+|+..+|+||+||++|-|++|-+||....... -..+.
T Consensus 214 t~~~--~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-ispgM--------------- 275 (400)
T KOG0604|consen 214 TQEP--GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-ISPGM--------------- 275 (400)
T ss_pred cCCC--ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-CChhH---------------
Confidence 5432 22345678999999999999999999999999999999999999996543311 00000
Q ss_pred hhhhhcCCcCCCCCCHH----HHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 716 DLQRLVDPRLGDDYPID----SVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~----~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
-.++.... -+||.. .++...++++.+|..+|.+|-|+++++.+-+.
T Consensus 276 -k~rI~~gq--y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi 325 (400)
T KOG0604|consen 276 -KRRIRTGQ--YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWI 325 (400)
T ss_pred -HhHhhccC--ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchh
Confidence 01111111 133433 44566789999999999999999999987664
No 379
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=8.2e-30 Score=293.83 Aligned_cols=263 Identities=20% Similarity=0.280 Sum_probs=172.4
Q ss_pred HhcCcccceeeeecCceEEEEEEEC------CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEE-E------EecC
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR------GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIG-Y------CVEG 554 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~------g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g-~------~~~~ 554 (790)
..++|++.+.||+|+||.||+|.+. +..+|+|++......+...+. .+....+.++..++. + ..+.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e-~l~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE-RVRRACPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH-HHHhhchhhHHHHHHhhhcccccccCC
Confidence 4578999999999999999999875 568999998653322211111 122222222222221 1 1234
Q ss_pred eEEEEEEEecCCChhhhhhcCCCC------------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCC
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKD------------------TLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPAN 616 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~------------------~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~N 616 (790)
..++||||+.+++|.+++...... ......+..++.|++.||.|||++++ +||||||+|
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gI---iHRDLKP~N 285 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGI---VHRDVKPQN 285 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCE---EeCcCCHHH
Confidence 589999999999999998753210 11233456799999999999999997 999999999
Q ss_pred EEecC-CCcEEEEEeCCCcccccCCcccccccccCCCccchhcccCC----------------------CCCchhhHHHH
Q 046083 617 ILIDK-NFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYG----------------------EVSPKIDVYAF 673 (790)
Q Consensus 617 ILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~s~~sDvwS~ 673 (790)
||+++ ++.+||+|||+++.+............+++.|+|||.+... .++.++|||||
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl 365 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA 365 (566)
T ss_pred EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence 99986 57999999999986654444444556789999999965322 23456799999
Q ss_pred HHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCC----C--CHHHHHHHHHHHHHcccc
Q 046083 674 GVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDD----Y--PIDSVRKMARLARACTQE 747 (790)
Q Consensus 674 Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~----~--~~~~~~~l~~li~~Cl~~ 747 (790)
||+||||+++..++... .......+.........+...+.+....+ + .........+|+.+||+.
T Consensus 366 GviL~el~~~~~~~~~~---------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 366 GLIFLQMAFPNLRSDSN---------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred HHHHHHHHhCcCCCchH---------HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 99999999876553211 11111111111111112222222211000 0 001123456899999999
Q ss_pred CCCCCCCHHHHHHHHH
Q 046083 748 NPQLRPSMRAIVVALM 763 (790)
Q Consensus 748 dP~~RPt~~evl~~L~ 763 (790)
||++|||++|++++-.
T Consensus 437 dP~kR~ta~e~L~Hpf 452 (566)
T PLN03225 437 KGRQRISAKAALAHPY 452 (566)
T ss_pred CcccCCCHHHHhCCcC
Confidence 9999999999998644
No 380
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=280.55 Aligned_cols=237 Identities=23% Similarity=0.377 Sum_probs=198.0
Q ss_pred cCcccceeeeecCceEEEEEEECCce--EEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELRGEK--AAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~g~~--vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
.++.....||-|+||.|=.+..+++. +|+|.+++ ...+....|-++|...+.|.||++|..+.+. ..|++|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34556778999999999999988665 78887764 3345688999999999999999999877765 489999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
|-|-||.|+..|+..+ .++..+...++-.+++|++|||++++ |.|||||+|++||.+|-+||.|||+|+....+.
T Consensus 500 EaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~i---IYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKGI---IYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcCc---eeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 9999999999999876 48888899999999999999999998 999999999999999999999999999876443
Q ss_pred cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRL 720 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 720 (790)
....++||+.|.|||.+.+...+.+.|.||||++++||++|.+||...++. ..+..++...
T Consensus 575 --KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm--------ktYn~ILkGi--------- 635 (732)
T KOG0614|consen 575 --KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM--------KTYNLILKGI--------- 635 (732)
T ss_pred --ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH--------HHHHHHHhhh---------
Confidence 344689999999999999999999999999999999999999999876542 2222222211
Q ss_pred cCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 046083 721 VDPRLGDDYPIDSVRKMARLARACTQENPQLRPS 754 (790)
Q Consensus 721 ~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 754 (790)
-...+|........+|+++.+..+|.+|--
T Consensus 636 ----d~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 636 ----DKIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ----hhhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 112456666777889999999999999965
No 381
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-30 Score=282.98 Aligned_cols=242 Identities=24% Similarity=0.386 Sum_probs=195.0
Q ss_pred HhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhc-CCCCCcceEEEEecC-eEEEEEEEe
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHV-HHLNLVRLIGYCVEG-SLFLVYEYI 563 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~-~~~lv~e~~ 563 (790)
.++.|.+...+|.|+|+.|-++... +...++|++... ..+..+|+.++... +|||++++.+.+.++ +.|+|||.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc-ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 3567888889999999999999876 778899998765 33445677666665 799999999998865 689999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEe-cCCCcEEEEEeCCCcccccCCcc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILI-DKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl-~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
.++-|.+.+..... +. ..+..|+.+++.|+.|||++++ |||||||+|||+ ++.++++|+|||.++.....
T Consensus 399 ~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~gv---vhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~--- 469 (612)
T KOG0603|consen 399 DGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQGV---VHRDLKPGNILLDGSAGHLRLTYFGFWSELERS--- 469 (612)
T ss_pred cccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcCe---eecCCChhheeecCCCCcEEEEEechhhhCchh---
Confidence 99988888775432 33 6777899999999999999998 999999999999 58899999999999876543
Q ss_pred cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcC
Q 046083 643 VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVD 722 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d 722 (790)
....+-|..|.|||++....+++++|+||||++||+|++|+.||...... . +....+-
T Consensus 470 -~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-------~-------------ei~~~i~- 527 (612)
T KOG0603|consen 470 -CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-------I-------------EIHTRIQ- 527 (612)
T ss_pred -hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-------H-------------HHHHhhc-
Confidence 22334578999999999999999999999999999999999999764321 0 1111111
Q ss_pred CcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 723 PRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 723 ~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
.+.+....+....+|+.+||+.||.+||+|.++..+-+.
T Consensus 528 ---~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 528 ---MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ---CCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 122234556678899999999999999999999876655
No 382
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=9.8e-30 Score=263.47 Aligned_cols=218 Identities=22% Similarity=0.229 Sum_probs=173.5
Q ss_pred cCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCChhhhhhcCCC
Q 046083 501 GGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRGSGK 577 (790)
Q Consensus 501 G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L~~~l~~~~~ 577 (790)
|.||.||++... ++.+|+|.+.... .+..|...+....|||++++++++.+ ...+++|||+++|+|.+++....
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~- 80 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL- 80 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc-
Confidence 889999999885 7899999987643 33445555666679999999998775 45899999999999999987643
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccccCCCccchh
Q 046083 578 DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPE 657 (790)
Q Consensus 578 ~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE 657 (790)
.+++..+..++.+++.||.|||+.++ +||||||+||+++.++.++++|||.+...... .....++..|+|||
T Consensus 81 -~l~~~~~~~~~~ql~~~l~~lH~~~i---~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~aPE 152 (237)
T cd05576 81 -NIPEECVKRWAAEMVVALDALHREGI---VCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCAPE 152 (237)
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccCCc
Confidence 48999999999999999999999997 99999999999999999999999987654322 12234567899999
Q ss_pred cccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHH
Q 046083 658 YAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKM 737 (790)
Q Consensus 658 ~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l 737 (790)
.+....++.++|+||+|+++|||++|..|+....... . .. .....+......+
T Consensus 153 ~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~--------------~---------~~----~~~~~~~~~~~~~ 205 (237)
T cd05576 153 VGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI--------------N---------TH----TTLNIPEWVSEEA 205 (237)
T ss_pred ccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc--------------c---------cc----cccCCcccCCHHH
Confidence 9988889999999999999999999988764321100 0 00 0001222334578
Q ss_pred HHHHHHccccCCCCCCCHH
Q 046083 738 ARLARACTQENPQLRPSMR 756 (790)
Q Consensus 738 ~~li~~Cl~~dP~~RPt~~ 756 (790)
.+++.+|++.||++||++.
T Consensus 206 ~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 206 RSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred HHHHHHHccCCHHHhcCCC
Confidence 8999999999999999973
No 383
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=3.3e-29 Score=281.71 Aligned_cols=263 Identities=21% Similarity=0.284 Sum_probs=180.2
Q ss_pred HhcCcccceeeeecCceEEEEEEE------------------CCceEEEEEeChhh---HHH--------------HHHH
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAEL------------------RGEKAAIKKMDMQA---SKE--------------FLAE 532 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~------------------~g~~vavK~~~~~~---~~~--------------~~~E 532 (790)
..++|++.++||+|+||.||+|.+ .+..||||+++... .++ +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 367899999999999999999964 24579999986321 122 3447
Q ss_pred HHHHHhcCCCCC-----cceEEEEe---------cCeEEEEEEEecCCChhhhhhcCC----------------------
Q 046083 533 LKVLTHVHHLNL-----VRLIGYCV---------EGSLFLVYEYIENGNLNQHLRGSG---------------------- 576 (790)
Q Consensus 533 ~~~l~~l~h~ni-----v~l~g~~~---------~~~~~lv~e~~~~g~L~~~l~~~~---------------------- 576 (790)
+.++.+++|.++ ++++++|. ++..+|||||+++++|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777788876654 56777664 245799999999999999987421
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccccCCCccch
Q 046083 577 KDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPP 656 (790)
Q Consensus 577 ~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aP 656 (790)
...++|..+..++.+++.+|.|||+.++ +||||||+|||++.++.+||+|||+++..............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~i---vHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGI---VHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCe---ecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1235678889999999999999999997 9999999999999999999999999976543222111223457899999
Q ss_pred hcccCCCC----------------------CchhhHHHHHHHHHHHHhCCc-cccccccccccccchHHHHHHHHcCCCC
Q 046083 657 EYAQYGEV----------------------SPKIDVYAFGVVLYELISAME-AVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 657 E~~~~~~~----------------------s~~sDvwS~Gvvl~elltG~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
|.+..... ..+.||||+||+++||++|.. |+........+ .......
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~----------~~~~~~~ 449 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE----------LRQYDND 449 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH----------Hhhccch
Confidence 98754321 134799999999999999875 55321110000 0000000
Q ss_pred hhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCC---CCCCCHHHHHHHHH
Q 046083 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENP---QLRPSMRAIVVALM 763 (790)
Q Consensus 714 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP---~~RPt~~evl~~L~ 763 (790)
...+.........-...........+++.+|+..+| .+|+|++|++++-+
T Consensus 450 ~~~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~ 502 (507)
T PLN03224 450 LNRWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRF 502 (507)
T ss_pred HHHHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCC
Confidence 001111111111111112334677899999999766 78999999987643
No 384
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-30 Score=238.32 Aligned_cols=261 Identities=29% Similarity=0.421 Sum_probs=192.4
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeChhh-----HHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA-----SKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEY 562 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~-----~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~ 562 (790)
+|.-.++||+|.+|+||+|+.. ++.||+|+++..+ .....+|+.+++.++|.|||++++... +..+-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 3555689999999999999876 7889999986432 345789999999999999999999876 5568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
|+. +|..+...... .++...+..++.|+++||.|+|++++ .|||+||+|.|++.+|+.|++|||+++.+......
T Consensus 83 cdq-dlkkyfdslng-~~d~~~~rsfmlqllrgl~fchshnv---lhrdlkpqnllin~ngelkladfglarafgipvrc 157 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSHNV---LHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC 157 (292)
T ss_pred hhH-HHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhhhh---hhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence 976 88888876543 58888999999999999999999998 99999999999999999999999999976543222
Q ss_pred cccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC--Chhhhhh
Q 046083 643 VHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD--PREDLQR 719 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~ 719 (790)
....+-|..|++|.++.+. -|++..|+||-||++.||.....|....... ...+...+ ..+..+. ....+..
T Consensus 158 -ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv---ddqlkrif-~~lg~p~ed~wps~t~ 232 (292)
T KOG0662|consen 158 -YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV---DDQLKRIF-RLLGTPTEDQWPSMTK 232 (292)
T ss_pred -eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH---HHHHHHHH-HHhCCCccccCCcccc
Confidence 2234568999999999875 5899999999999999998754444322211 11122222 2222111 1112223
Q ss_pred hcCCcCCCCCCH---------HHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 720 LVDPRLGDDYPI---------DSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 720 ~~d~~l~~~~~~---------~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+-|-...+.+|. .....=.+++...+.-+|..|.++++.+++
T Consensus 233 lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 233 LPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 333332222321 122233578888888899999999988764
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1.2e-28 Score=254.34 Aligned_cols=232 Identities=31% Similarity=0.516 Sum_probs=187.7
Q ss_pred CceEEEEEEEC--CceEEEEEeChhh----HHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCChhhhhhc
Q 046083 502 GFGAVFYAELR--GEKAAIKKMDMQA----SKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHLRG 574 (790)
Q Consensus 502 ~fg~Vy~a~~~--g~~vavK~~~~~~----~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L~~~l~~ 574 (790)
+||.||+|... ++.+++|.+.... .+.+.+|++.+++++|+|++++++++.. ...+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999986 5899999987432 5789999999999999999999998875 568999999999999999976
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccccCCCcc
Q 046083 575 SGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYM 654 (790)
Q Consensus 575 ~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~ 654 (790)
... +++..++.++.++++++.|||+.++ +|+||+|+||++++++.++|+|||.+....... ......++..|+
T Consensus 81 ~~~--~~~~~~~~~~~~l~~~l~~lh~~~i---~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~ 153 (244)
T smart00220 81 RGR--LSEDEARFYARQILSALEYLHSNGI---IHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYM 153 (244)
T ss_pred ccC--CCHHHHHHHHHHHHHHHHHHHHcCe---ecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCC
Confidence 543 8999999999999999999999998 999999999999999999999999998765332 223456788999
Q ss_pred chhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCH-HH
Q 046083 655 PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPI-DS 733 (790)
Q Consensus 655 aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~-~~ 733 (790)
+||.+....++.++||||||+++++|++|..||..... ........... ........ ..
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~-------~~~~~~~~~~~-------------~~~~~~~~~~~ 213 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ-------LLELFKKIGKP-------------KPPFPPPEWKI 213 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-------HHHHHHHHhcc-------------CCCCccccccC
Confidence 99999988899999999999999999999999854211 11111111111 00000000 14
Q ss_pred HHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 734 VRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 734 ~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
...+.+++.+|+..+|++||++.++++
T Consensus 214 ~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 214 SPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred CHHHHHHHHHHccCCchhccCHHHHhh
Confidence 467899999999999999999999986
No 386
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=9.9e-30 Score=253.89 Aligned_cols=259 Identities=22% Similarity=0.378 Sum_probs=200.2
Q ss_pred cCHHHHHHHhcCcccceeeeecCceEEEEEEE--CCceEEEEEeCh---hhHHHHHHHHHHHHhc-CCCCCcceEEEEec
Q 046083 480 FSYEELAKATNDFSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDM---QASKEFLAELKVLTHV-HHLNLVRLIGYCVE 553 (790)
Q Consensus 480 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~--~g~~vavK~~~~---~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~ 553 (790)
-+|+|+.+-| .+.||+|.++.|--+.. .|..+|||++.+ .......+|++++.+. .|+||+.|++|+.+
T Consensus 73 g~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 73 GKFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred chHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 3578887777 68999999999998765 388999999874 3456789999999998 59999999999986
Q ss_pred C-eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCc---EEEEE
Q 046083 554 G-SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFR---AKVAD 629 (790)
Q Consensus 554 ~-~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~---~kl~D 629 (790)
+ ..|||||-|.||+|..+++... .+++.++.++.++|+.||.|||.++| .||||||+|||-..... +||+|
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgI---AHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGI---AHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCc---ccccCCccceeecCCCCcCceeeec
Confidence 5 5899999999999999998754 59999999999999999999999998 99999999999966543 79999
Q ss_pred eCCCcccccC------CcccccccccCCCccchhccc-----CCCCCchhhHHHHHHHHHHHHhCCcccccccccc--cc
Q 046083 630 FGLAKLTEVG------SASVHTRLVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETI--TE 696 (790)
Q Consensus 630 fGla~~~~~~------~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~--~~ 696 (790)
|.+..-.... ........+|+..|||||+.. ..-|+.++|.||||||||-|++|-+||....... ++
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 9887643211 112223467899999999763 3458899999999999999999999997655321 11
Q ss_pred ccc-----hHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHH----HHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 697 STG-----LVALFEEVLRQPDPREDLQRLVDPRLGDDYPID----SVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 697 ~~~-----~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~----~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
... ...+|+.+-+ .. -+||.. +..+..+++...+-.|+.+|-++.+++.+-+
T Consensus 303 rGe~Cr~CQ~~LFesIQE-------------Gk--YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 303 RGEVCRVCQNKLFESIQE-------------GK--YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred CCCccHHHHHHHHHHHhc-------------cC--CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcc
Confidence 111 1122222221 11 134443 3455678888899999999999998887443
No 387
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=8.9e-31 Score=255.67 Aligned_cols=247 Identities=25% Similarity=0.370 Sum_probs=186.7
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEEe-cCeEEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYCV-EGSLFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~-~~~~~lv~e~~ 563 (790)
.+-+..||.|.||+|+|-..+ |+..|||+++. .+.+++..|.+...+- +.||||++||.+. +++.|+.||.|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 344679999999999998876 88999999974 3445678888765554 7999999999765 78899999999
Q ss_pred cCCChhhhh---hcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 564 ENGNLNQHL---RGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 564 ~~g~L~~~l---~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
+- +|..+- ..-.+..+++.-..+|..-.+.||.||...-. |||||+||+|||||..|.+||||||++-.+....
T Consensus 146 d~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lk--iIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si 222 (361)
T KOG1006|consen 146 DI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELK--IIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI 222 (361)
T ss_pred hh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhh--hhhccCChhheEEecCCCEeeecccchHhHHHHH
Confidence 65 665433 22234568888888999999999999997643 4999999999999999999999999987553222
Q ss_pred cccccccccCCCccchhcccCC--CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYG--EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~--~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
. .+.-.|-..|||||.+... .|+-+|||||||++|+|+.||..|+..-+. .......+.....+
T Consensus 223 A--kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s-------vfeql~~Vv~gdpp----- 288 (361)
T KOG1006|consen 223 A--KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS-------VFEQLCQVVIGDPP----- 288 (361)
T ss_pred H--hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH-------HHHHHHHHHcCCCC-----
Confidence 1 1234566789999998543 589999999999999999999999854322 22233333332221
Q ss_pred hhcCCcCC-CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 719 RLVDPRLG-DDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 719 ~~~d~~l~-~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
.+. +....+....+..++..|+.+|-..||...++..
T Consensus 289 -----~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 289 -----ILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred -----eecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 111 1111335567899999999999999999999865
No 388
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5e-30 Score=265.12 Aligned_cols=251 Identities=24% Similarity=0.406 Sum_probs=193.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh----------hhHHHHHHHHHHHHhcCCCCCcceEEEEe-c-C
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM----------QASKEFLAELKVLTHVHHLNLVRLIGYCV-E-G 554 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~----------~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~-~ 554 (790)
.++|-++++||+|||+.||+|.+- .+.||||+-.. ...+...+|.+|.+.+.||.||++|+++. + .
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 356888999999999999999864 67899997642 11234678999999999999999999986 4 4
Q ss_pred eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC---CCcEEEEEeC
Q 046083 555 SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK---NFRAKVADFG 631 (790)
Q Consensus 555 ~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~---~~~~kl~DfG 631 (790)
.+|-|+|||+|.+|+-+|.... .++++++..|+.||+.||.||.+.. |||||-||||.||||.+ .|.+||.|||
T Consensus 542 sFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred cceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeecc
Confidence 5899999999999999998653 6899999999999999999999987 78999999999999944 5789999999
Q ss_pred CCcccccCCcc------cccccccCCCccchhcccCC----CCCchhhHHHHHHHHHHHHhCCccccccccccccccchH
Q 046083 632 LAKLTEVGSAS------VHTRLVGTFGYMPPEYAQYG----EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLV 701 (790)
Q Consensus 632 la~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~ 701 (790)
+++.++..... ......||.+|++||++--+ ..+.|.||||+||++|..+.|+.||......
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ-------- 690 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ-------- 690 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--------
Confidence 99988654332 22346799999999988533 5788999999999999999999999654321
Q ss_pred HHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHH
Q 046083 702 ALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIV 759 (790)
Q Consensus 702 ~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl 759 (790)
..++...- +.. ...+.-...+....+...+|++||+.--++|....++.
T Consensus 691 ---QdILqeNT----Ilk--AtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 691 ---QDILQENT----ILK--ATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred ---HHHHhhhc----hhc--ceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 11111100 000 00111111123345677899999999999998777664
No 389
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.1e-30 Score=250.98 Aligned_cols=262 Identities=29% Similarity=0.394 Sum_probs=190.7
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec---------Ce
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE---------GS 555 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~---------~~ 555 (790)
|.-..+||+|.||.||+|+.+ |+.||+|+.-.+ -.....+|+++|..++|+|++.++..|.. ..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 444678999999999999876 677888876432 23456889999999999999999887741 23
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
+|+||.+|+. +|.-+|... ...++...+.+++.++..||.|+|...+ +|||+|+.|+|++.++.+||+|||+++.
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~ki---lHRDmKaaNvLIt~dgilklADFGlar~ 173 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNKI---LHRDMKAANVLITKDGILKLADFGLARA 173 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhhH---HhhcccHhhEEEcCCceEEeeccccccc
Confidence 8999999998 888888754 2468999999999999999999999998 9999999999999999999999999986
Q ss_pred cccCCcc---cccccccCCCccchhcccC-CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHc--
Q 046083 636 TEVGSAS---VHTRLVGTFGYMPPEYAQY-GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLR-- 709 (790)
Q Consensus 636 ~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~-- 709 (790)
+...... ..+..+-|..|++||.+.+ ..++++.|||+-||++.||+|+.+-+....+. . ...+...+..
T Consensus 174 fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq----q-ql~~Is~LcGs~ 248 (376)
T KOG0669|consen 174 FSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ----Q-QLHLISQLCGSI 248 (376)
T ss_pred eecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH----H-HHHHHHHHhccC
Confidence 6433222 2334566999999998876 47999999999999999999998777554321 1 1111111111
Q ss_pred --CCCC----hhhhhhhcCCcCC-CCCC--HHH------HHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 710 --QPDP----REDLQRLVDPRLG-DDYP--IDS------VRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 710 --~~~~----~~~l~~~~d~~l~-~~~~--~~~------~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+-++ .+.++.+-.+.+. +.+. .+. ..+..+|+..++..||.+|++.++++.+-.
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~ 317 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDF 317 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhh
Confidence 0010 0111111001010 0000 011 125678999999999999999999876543
No 390
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=267.52 Aligned_cols=242 Identities=22% Similarity=0.356 Sum_probs=190.9
Q ss_pred ceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCC
Q 046083 495 GNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENG 566 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g 566 (790)
.+.||+|.||+||-|+.+ |+.||||.+.+ .....+.+|+.||+.++||.||.+.-.|.. +..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 579999999999999875 99999998863 344678999999999999999999887774 568999999955
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC---CcEEEEEeCCCcccccCCccc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN---FRAKVADFGLAKLTEVGSASV 643 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~---~~~kl~DfGla~~~~~~~~~~ 643 (790)
+..+.+-...+..+++.....++.||+.||.|||.++| +|+||||+||||... ..+||||||+|+..... ..
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knI---vHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk--sF 722 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNI---VHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK--SF 722 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcce---eeccCCchheeeccCCCCCceeeccccceeecchh--hh
Confidence 66666655556678888888899999999999999998 999999999999543 47999999999987533 33
Q ss_pred ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCC
Q 046083 644 HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDP 723 (790)
Q Consensus 644 ~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~ 723 (790)
...++||+.|+|||+++...|...-|+||.||++|--++|..||....+ +....+.. .++.|
T Consensus 723 RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEd-------IndQIQNA-----------aFMyP 784 (888)
T KOG4236|consen 723 RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDED-------INDQIQNA-----------AFMYP 784 (888)
T ss_pred hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccc-------hhHHhhcc-----------ccccC
Confidence 4568999999999999999999999999999999999999999964322 11111110 11111
Q ss_pred cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 724 RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 724 ~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.-.. .+......+||...|+..-++|-+.+.-+.+.|
T Consensus 785 p~PW---~eis~~AidlIn~LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 785 PNPW---SEISPEAIDLINNLLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred CCch---hhcCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence 1000 133455678999999999999999877655433
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-28 Score=247.04 Aligned_cols=245 Identities=23% Similarity=0.383 Sum_probs=193.4
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhH------HHHHHHHHHHHhc-CCCCCcceEEEEe-cCeEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS------KEFLAELKVLTHV-HHLNLVRLIGYCV-EGSLFL 558 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~------~~~~~E~~~l~~l-~h~niv~l~g~~~-~~~~~l 558 (790)
.++|.+++.||+|+|..|..++++ .+.+|+|+++++-. .=.+.|-....+. +||.+|.+..++. +..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 468999999999999999999886 67899998875322 2245566666655 7999999998776 667999
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
|.||+.||+|--+++... .+++..+..+..+|+.||.|||++|+ +.||||..|+|+|..|++||.|+|+.+.- .
T Consensus 329 vieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rgi---iyrdlkldnvlldaeghikltdygmcke~-l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERGI---IYRDLKLDNVLLDAEGHIKLTDYGMCKEG-L 402 (593)
T ss_pred EEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcCe---eeeeccccceEEccCCceeecccchhhcC-C
Confidence 999999999988887654 48899999999999999999999998 99999999999999999999999999853 2
Q ss_pred CCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
........++||+.|.|||.+.+..|....|+|++||+++||+.|+.||.-.+....+...-.-++..
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqv------------ 470 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQV------------ 470 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHH------------
Confidence 33444566899999999999999999999999999999999999999997655322111111112222
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCC
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPS 754 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt 754 (790)
++++.+ .+|.........+++..|++||.+|..
T Consensus 471 -ilekqi--riprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 471 -ILEKQI--RIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred -Hhhhcc--cccceeehhhHHHHHHhhcCCcHHhcC
Confidence 222222 234445556778999999999999853
No 392
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-29 Score=279.93 Aligned_cols=243 Identities=26% Similarity=0.406 Sum_probs=188.8
Q ss_pred cccceeeeecCceE-EEEEEECCceEEEEEeChhhHHHHHHHHHHHHhc-CCCCCcceEEEEecCe-EEEEEEEecCCCh
Q 046083 492 FSMGNKIGQGGFGA-VFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV-HHLNLVRLIGYCVEGS-LFLVYEYIENGNL 568 (790)
Q Consensus 492 f~~~~~lG~G~fg~-Vy~a~~~g~~vavK~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~-~~lv~e~~~~g~L 568 (790)
|...+.+|.|+.|+ ||+|.+.|+.||||++-.+......+|+..|+.- .|||||++|+...+.+ .|+..|.|.- +|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL 589 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SL 589 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hH
Confidence 45566789999875 8999999999999999888887888999999988 6999999998776544 8999999976 99
Q ss_pred hhhhhcCCC--CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC---C--CcEEEEEeCCCcccccCCc
Q 046083 569 NQHLRGSGK--DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK---N--FRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 569 ~~~l~~~~~--~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~---~--~~~kl~DfGla~~~~~~~~ 641 (790)
.+++...+. ....-...+.+..|++.||++||+.++ |||||||+||||+. + .+++|+|||+++.+..+..
T Consensus 590 ~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~i---VHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s 666 (903)
T KOG1027|consen 590 QDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKI---VHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS 666 (903)
T ss_pred HHHHhccccchhhcccccHHHHHHHHHHHHHHHHhccc---ccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence 999987421 111113446788899999999999998 99999999999965 2 5789999999998876544
Q ss_pred cc--ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhC-CccccccccccccccchHHHHHHHHcCCCChhhhh
Q 046083 642 SV--HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISA-MEAVVKTNETITESTGLVALFEEVLRQPDPREDLQ 718 (790)
Q Consensus 642 ~~--~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 718 (790)
.. .....||.+|+|||.+....-+.+.||||+||++|+.++| ..||...... ...++.... .+.
T Consensus 667 S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R----------~~NIl~~~~---~L~ 733 (903)
T KOG1027|consen 667 SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER----------QANILTGNY---TLV 733 (903)
T ss_pred hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh----------hhhhhcCcc---cee
Confidence 33 3357799999999999998889999999999999999987 7888543221 111111111 010
Q ss_pred hhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 719 RLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 719 ~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
. +.. ..++ +..+||.+|++.+|..||++.+|+.
T Consensus 734 ~-----L~~--~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 H-----LEP--LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred e-----ecc--CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 0 100 0111 6789999999999999999999974
No 393
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=9.2e-28 Score=229.70 Aligned_cols=256 Identities=22% Similarity=0.369 Sum_probs=196.9
Q ss_pred hcCcccceeeeecCceEEEEEEE--CCceEEEEEeChhhHHHHHHHHHHHHhcC-CCCCcceEEEEecC---eEEEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDMQASKEFLAELKVLTHVH-HLNLVRLIGYCVEG---SLFLVYEY 562 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~--~g~~vavK~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~---~~~lv~e~ 562 (790)
.++|++.+++|+|.++.||.|.. ++++++||.+++-..+.+.+|+.+|..++ ||||+++++...+. ...||+||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~ 116 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEY 116 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhh
Confidence 46799999999999999999984 58899999999988899999999999996 99999999988754 36899999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC-CcEEEEEeCCCcccccCCc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN-FRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~-~~~kl~DfGla~~~~~~~~ 641 (790)
+.+.+...+.. .++...+..++.+++.||.|+|+.|+ .|||+||.|+++|.. -.++|+|+|+|.++.++..
T Consensus 117 v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GI---mHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e 188 (338)
T KOG0668|consen 117 VNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGI---MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE 188 (338)
T ss_pred hccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCc---ccccCCcceeeechhhceeeeeecchHhhcCCCce
Confidence 99977766543 47778889999999999999999998 999999999999875 4689999999998865433
Q ss_pred ccccccccCCCccchhccc-CCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHH--------HHHcC--
Q 046083 642 SVHTRLVGTFGYMPPEYAQ-YGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFE--------EVLRQ-- 710 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~-~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~--------~~~~~-- 710 (790)
. .-.+.+..|.-||.+- ...|+-.-|+|||||+|.+|+..+.||........ .+..... ..+.+
T Consensus 189 Y--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D---QLVkIakVLGt~el~~Yl~KY~ 263 (338)
T KOG0668|consen 189 Y--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD---QLVKIAKVLGTDELYAYLNKYQ 263 (338)
T ss_pred e--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH---HHHHHHHHhChHHHHHHHHHHc
Confidence 2 2234567889999885 45688899999999999999999999976554321 1111110 00100
Q ss_pred ------------CCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 711 ------------PDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 711 ------------~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
...+..+..++.+.-+.. ...+..+++...|..|-.+|||++|.+.+
T Consensus 264 i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl----~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 264 IDLDPQFEDILGRHSRKPWSRFINSENQHL----VSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred cCCChhHhhHhhccccccHHHhCCcccccc----CChHHHHHHHHHHhhccccccchHHHhcC
Confidence 001112223332221111 12567899999999999999999998764
No 394
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=241.02 Aligned_cols=260 Identities=25% Similarity=0.401 Sum_probs=194.1
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeC-----hhhHHHHHHHHHHHHhcCCCCCcceEEEEec------CeEEE
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMD-----MQASKEFLAELKVLTHVHHLNLVRLIGYCVE------GSLFL 558 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~------~~~~l 558 (790)
.+..+.||.|.||.||.+.+. |+.|++|++. ....+.+.+|+++|..++|.|++..++.-.. .++|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344689999999999999875 8899999985 2455789999999999999999999886543 24688
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
+.|.|.. +|...+-. .+.++-..+.-+..||++||.|||+.++ .||||||.|.|++.|..+||||||+++..+.
T Consensus 135 ~TELmQS-DLHKIIVS--PQ~Ls~DHvKVFlYQILRGLKYLHsA~I---LHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVS--PQALTPDHVKVFVYQILRGLKYLHTANI---LHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHh-hhhheecc--CCCCCcchhhhhHHHHHhhhHHHhhcch---hhccCCCccEEeccCceEEecccccccccch
Confidence 8898866 78777764 3467777777788999999999999998 9999999999999999999999999998766
Q ss_pred CCcccccccccCCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhh
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDL 717 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 717 (790)
......+..+-|..|+|||.+++. .|+.+.||||.||++.||+..+-.|...++. ....+..+++..+.. +.+
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi-----qQL~lItdLLGTPs~-EaM 282 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI-----EQLQMIIDLLGTPSQ-EAM 282 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH-----HHHHHHHHHhCCCcH-HHH
Confidence 655555556678999999999875 6999999999999999999776666544331 122233333332221 111
Q ss_pred h--------hhcC-----CcCCCCC----CHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 718 Q--------RLVD-----PRLGDDY----PIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 718 ~--------~~~d-----~~l~~~~----~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
+ .++. |.+...+ +..-..+-..+...++..||+.|.+.++.+..+.
T Consensus 283 r~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 283 KYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 1 0111 1111111 1122234567888899999999999998877654
No 395
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=4.3e-27 Score=252.79 Aligned_cols=210 Identities=28% Similarity=0.390 Sum_probs=172.5
Q ss_pred ccCHHHHHHHhc---CcccceeeeecCceEEEEEEEC--CceEEEEEeChh------hHHHHHHHHHHHHhcCCCCCcce
Q 046083 479 EFSYEELAKATN---DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ------ASKEFLAELKVLTHVHHLNLVRL 547 (790)
Q Consensus 479 ~~~~~~l~~~~~---~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~niv~l 547 (790)
+..|-.|.++.- -|...+.||-|.||.|.+++.. ...+|.|.+++. .....+.|-+||.....+-||+|
T Consensus 615 ESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrL 694 (1034)
T KOG0608|consen 615 ESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRL 694 (1034)
T ss_pred hhhHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEE
Confidence 334445555443 4888999999999999999754 557888887643 33457889999999999999999
Q ss_pred EEEEe-cCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEE
Q 046083 548 IGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAK 626 (790)
Q Consensus 548 ~g~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~k 626 (790)
|-.|. ++.+|+||+|++||++-.+|-..+ -|.+..+..++.++..|+++.|..|. |||||||+|||||.+|++|
T Consensus 695 yySFQDkdnLYFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmGF---IHRDiKPDNILIDrdGHIK 769 (1034)
T KOG0608|consen 695 YYSFQDKDNLYFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMGF---IHRDIKPDNILIDRDGHIK 769 (1034)
T ss_pred EEEeccCCceEEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhccc---eecccCccceEEccCCcee
Confidence 86665 456999999999999999888765 58888888999999999999999997 9999999999999999999
Q ss_pred EEEeCCCccccc---------CCcc--------------------------------cccccccCCCccchhcccCCCCC
Q 046083 627 VADFGLAKLTEV---------GSAS--------------------------------VHTRLVGTFGYMPPEYAQYGEVS 665 (790)
Q Consensus 627 l~DfGla~~~~~---------~~~~--------------------------------~~~~~~gt~~y~aPE~~~~~~~s 665 (790)
|.||||+.-+.. ++.. .....+||+.|+|||++....++
T Consensus 770 LTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~ 849 (1034)
T KOG0608|consen 770 LTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYT 849 (1034)
T ss_pred eeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCcc
Confidence 999999853211 0000 00124799999999999999999
Q ss_pred chhhHHHHHHHHHHHHhCCccccccccc
Q 046083 666 PKIDVYAFGVVLYELISAMEAVVKTNET 693 (790)
Q Consensus 666 ~~sDvwS~Gvvl~elltG~~p~~~~~~~ 693 (790)
..+|+||.|||||||+-|+.||......
T Consensus 850 q~cdwws~gvil~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 850 QLCDWWSVGVILYEMLVGQPPFLADTPG 877 (1034)
T ss_pred ccchhhHhhHHHHHHhhCCCCccCCCCC
Confidence 9999999999999999999999765543
No 396
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-26 Score=242.58 Aligned_cols=269 Identities=22% Similarity=0.288 Sum_probs=195.2
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--hhHHHHHHHHHHHHhcC-----C---CCCcceEEEEe----
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFLAELKVLTHVH-----H---LNLVRLIGYCV---- 552 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--~~~~~~~~E~~~l~~l~-----h---~niv~l~g~~~---- 552 (790)
..+|.+.++||+|.|++||++.+. .+.||+|+.+. ...+....|+++|++++ | .+||+|+++|.
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 367999999999999999999886 67899999985 34466789999999993 3 36999999885
Q ss_pred c-CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC---------
Q 046083 553 E-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN--------- 622 (790)
Q Consensus 553 ~-~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~--------- 622 (790)
. .+.+||+|++ |-+|..+|.....+.++...+.+|+.||+.||.|||..+. |||.||||+|||+..+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPENvLl~~~e~~~~~~~~ 233 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPENVLLCSTEIDPAKDAR 233 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCcceeeeeccccchhhhhh
Confidence 2 2589999999 4499999988877789999999999999999999998864 5999999999999311
Q ss_pred --C-----------------------------------------------------------------------------
Q 046083 623 --F----------------------------------------------------------------------------- 623 (790)
Q Consensus 623 --~----------------------------------------------------------------------------- 623 (790)
+
T Consensus 234 ~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~~ 313 (590)
T KOG1290|consen 234 EAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGNE 313 (590)
T ss_pred hhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCccc
Confidence 0
Q ss_pred ------------------------------------------------------------------------------cE
Q 046083 624 ------------------------------------------------------------------------------RA 625 (790)
Q Consensus 624 ------------------------------------------------------------------------------~~ 625 (790)
++
T Consensus 314 ~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~v 393 (590)
T KOG1290|consen 314 STVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIRV 393 (590)
T ss_pred cchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccceeE
Confidence 01
Q ss_pred EEEEeCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccc-cccchHHHH
Q 046083 626 KVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETIT-ESTGLVALF 704 (790)
Q Consensus 626 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~-~~~~~~~~~ 704 (790)
||+|||-|....... +.-..|..|+|||++.+..|++.+|||||+|++|||.||...|........ .+.+.....
T Consensus 394 KIaDlGNACW~~khF----T~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i 469 (590)
T KOG1290|consen 394 KIADLGNACWVHKHF----TEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALI 469 (590)
T ss_pred EEeeccchhhhhhhh----chhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHH
Confidence 111111111110000 001235579999999999999999999999999999999999876554322 233333444
Q ss_pred HHHHcCCCC-----hhhhhhhcCCc--------CC-----------CCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 705 EEVLRQPDP-----REDLQRLVDPR--------LG-----------DDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 705 ~~~~~~~~~-----~~~l~~~~d~~--------l~-----------~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
.+++...+. ....+++++.. |. -.++.+...++.+++.-||+.+|++|||+.+.++
T Consensus 470 ~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~ 549 (590)
T KOG1290|consen 470 MELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK 549 (590)
T ss_pred HHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence 443332110 00111222211 00 1356788999999999999999999999999998
Q ss_pred HHHh
Q 046083 761 ALMT 764 (790)
Q Consensus 761 ~L~~ 764 (790)
+-+.
T Consensus 550 hPwL 553 (590)
T KOG1290|consen 550 HPWL 553 (590)
T ss_pred Cccc
Confidence 7664
No 397
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.94 E-value=2.4e-27 Score=223.81 Aligned_cols=195 Identities=26% Similarity=0.393 Sum_probs=156.1
Q ss_pred cccceeeeecCceEEEEEEE--CCceEEEEEeCh----hhHHHHHHHHHHHHhc-CCCCCcceEEEE-ecCeEEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDM----QASKEFLAELKVLTHV-HHLNLVRLIGYC-VEGSLFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~--~g~~vavK~~~~----~~~~~~~~E~~~l~~l-~h~niv~l~g~~-~~~~~~lv~e~~ 563 (790)
..-...||+|++|.|-+-++ .|...|+|++.. +..+...+|+++..+- .+|.+|.+||.. .+++.++.||.|
T Consensus 48 L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M 127 (282)
T KOG0984|consen 48 LVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM 127 (282)
T ss_pred hhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh
Confidence 34467899999998876665 489999998863 4456677888876554 799999999954 578899999999
Q ss_pred cCCChhhhhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc
Q 046083 564 ENGNLNQHLRG--SGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 564 ~~g~L~~~l~~--~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~ 641 (790)
+- +|+.+-+. .....+++...-+|+..+.+||.|||++-. ++|||+||+|||++.+|++|+||||++-.+...-.
T Consensus 128 ~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiA 204 (282)
T KOG0984|consen 128 DT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGISGYLVDSIA 204 (282)
T ss_pred hh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccceeehhhhH
Confidence 76 78766543 123468899999999999999999999753 59999999999999999999999999986643222
Q ss_pred ccccccccCCCccchhcccC----CCCCchhhHHHHHHHHHHHHhCCccccccc
Q 046083 642 SVHTRLVGTFGYMPPEYAQY----GEVSPKIDVYAFGVVLYELISAMEAVVKTN 691 (790)
Q Consensus 642 ~~~~~~~gt~~y~aPE~~~~----~~~s~~sDvwS~Gvvl~elltG~~p~~~~~ 691 (790)
. +.-.|--.|||||.+.. ..|+-|+||||||+.+.||.+++.|+....
T Consensus 205 k--t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 205 K--TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred H--HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 1 11345568999998853 368999999999999999999999986644
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=6.5e-26 Score=227.96 Aligned_cols=205 Identities=40% Similarity=0.686 Sum_probs=179.9
Q ss_pred eeecCceEEEEEEEC--CceEEEEEeChhhH----HHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCChhh
Q 046083 498 IGQGGFGAVFYAELR--GEKAAIKKMDMQAS----KEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNLNQ 570 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~----~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L~~ 570 (790)
||+|.+|.||++... ++.+++|.+..... +.+.+|++.++.++|++++++++++.. ...+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999997 88999999986543 679999999999999999999998875 56899999999999999
Q ss_pred hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC-CCcEEEEEeCCCcccccCCccccccccc
Q 046083 571 HLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK-NFRAKVADFGLAKLTEVGSASVHTRLVG 649 (790)
Q Consensus 571 ~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~g 649 (790)
++.... ..+++..+..++.++++++.+||+.++ +|+||+|.||+++. ++.++|+|||.+........ ......+
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~---~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~ 155 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNGI---IHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVG 155 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccC
Confidence 998642 358999999999999999999999997 99999999999999 89999999999986643321 1233457
Q ss_pred CCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCC
Q 046083 650 TFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDD 728 (790)
Q Consensus 650 t~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~ 728 (790)
...|++||.+... ..+.+.|+|++|+++++|
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 8899999999877 888999999999999998
Q ss_pred CCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 729 YPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 729 ~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
..+.+++..|++.+|.+||++.+++..
T Consensus 188 ------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 357789999999999999999999865
No 399
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=5.6e-26 Score=228.24 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=189.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh-----hhHHHHHHHHHHHHhcCCCCCcceEEEEec-------Ce
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM-----QASKEFLAELKVLTHVHHLNLVRLIGYCVE-------GS 555 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-------~~ 555 (790)
.+|.-...+|.|.- .|-.+.+. +++|++|++.. ...+...+|...+..++|+|+++++.++.. .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 34555678888887 56666554 88999998753 345677889999999999999999998852 24
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
.|+|||+|+. +|...+.. .++-.....+..|++.|++|||+.++ +||||||+||++..+..+||.|||+|+.
T Consensus 96 ~y~v~e~m~~-nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~I---ihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVILM----ELDHETISYILYQMLCGIKHLHSAGI---IHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHHhhhh-HHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcce---eecccCcccceecchhheeeccchhhcc
Confidence 7999999966 99998873 36777888999999999999999998 9999999999999999999999999986
Q ss_pred cccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHH---cCCC
Q 046083 636 TEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVL---RQPD 712 (790)
Q Consensus 636 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~ 712 (790)
.... -..+..+.+..|+|||++.+..+.+..||||+||++.||++|.-.|..... ...+..+. +.++
T Consensus 168 e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~--------idQ~~ki~~~lgtpd 237 (369)
T KOG0665|consen 168 EDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDH--------IDQWNKIIEQLGTPD 237 (369)
T ss_pred cCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchH--------HHHHHHHHHHhcCCC
Confidence 5432 245567788999999999988899999999999999999999887753221 11111111 1111
Q ss_pred C------------------h---hhhhhhcCCc-CCC--CCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 046083 713 P------------------R---EDLQRLVDPR-LGD--DYPIDSVRKMARLARACTQENPQLRPSMRAIVVAL 762 (790)
Q Consensus 713 ~------------------~---~~l~~~~d~~-l~~--~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L 762 (790)
+ . -.+.+.+... ... +.+.-......+++.+||-.+|++|-+.++++.+-
T Consensus 238 ~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 238 PSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred HHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 0 0 0111111110 000 11122344578899999999999999999998754
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=1.1e-24 Score=222.57 Aligned_cols=194 Identities=35% Similarity=0.591 Sum_probs=167.9
Q ss_pred cccceeeeecCceEEEEEEEC--CceEEEEEeChh----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEec
Q 046083 492 FSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQ----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIE 564 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~ 564 (790)
|.+.+.||+|++|.||++... ++.+++|.+... ..+.+.+|++.+++++|+|++++++++.. ...++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 567889999999999999986 588999999754 45678999999999999999999998875 45899999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVH 644 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 644 (790)
+++|.+++..... .+++.....++.+++.++.+||++++ +|+||+|+||+++.++.++|+|||.+...........
T Consensus 81 ~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i---~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGI---VHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL 156 (225)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCe---ecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence 9999999986532 28899999999999999999999987 9999999999999999999999999987654321122
Q ss_pred cccccCCCccchhcc-cCCCCCchhhHHHHHHHHHHHHhCCccccc
Q 046083 645 TRLVGTFGYMPPEYA-QYGEVSPKIDVYAFGVVLYELISAMEAVVK 689 (790)
Q Consensus 645 ~~~~gt~~y~aPE~~-~~~~~s~~sDvwS~Gvvl~elltG~~p~~~ 689 (790)
....++..|++||.+ ....++.++|+|+||++++||++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 335677889999998 666788899999999999999999999954
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=3.9e-26 Score=248.01 Aligned_cols=247 Identities=26% Similarity=0.431 Sum_probs=194.6
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh---HHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEY 562 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~ 562 (790)
.++|.+...+|.|.+|.|||+++. ++..|+|.++.+. ..-...|+-+++..+||||+.++|-+. ...+++.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 467889999999999999999986 8899999988643 344678999999999999999999776 5568999999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS 642 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~ 642 (790)
+.+|+|.+.-+..+ ++++.++..++++.++||+|||+.+. +|||||-.|||+++.+.+|++|||.+-.+...-.
T Consensus 94 cgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~gk---~hRdiKGanilltd~gDvklaDfgvsaqitati~- 167 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQGK---IHRDIKGANILLTDEGDVKLADFGVSAQITATIA- 167 (829)
T ss_pred cCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcCCc---ccccccccceeecccCceeecccCchhhhhhhhh-
Confidence 99999999877654 69999999999999999999999998 9999999999999999999999999876543222
Q ss_pred cccccccCCCccchhcc---cCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhh
Q 046083 643 VHTRLVGTFGYMPPEYA---QYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQR 719 (790)
Q Consensus 643 ~~~~~~gt~~y~aPE~~---~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 719 (790)
....+.||+.|||||+. ..+.|.+.+|||+.|+...||--=++|.....+ .....+... .
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhp----------mr~l~LmTk-------S 230 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHP----------MRALFLMTK-------S 230 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccch----------HHHHHHhhc-------c
Confidence 22347899999999976 456789999999999999998655566543322 111111110 1
Q ss_pred hcCC-cCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 720 LVDP-RLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 720 ~~d~-~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
..++ .+.+ +..-.+.|.++++.|+..+|.+||+++.+++
T Consensus 231 ~~qpp~lkD--k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 231 GFQPPTLKD--KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCCCcccC--CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1111 1111 2233457899999999999999999887654
No 402
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.92 E-value=2e-25 Score=238.62 Aligned_cols=191 Identities=24% Similarity=0.407 Sum_probs=163.9
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhH-----------HHHHHHHHHHHhcC---CCCCcceEEEEec
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQAS-----------KEFLAELKVLTHVH---HLNLVRLIGYCVE 553 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~-----------~~~~~E~~~l~~l~---h~niv~l~g~~~~ 553 (790)
.+|+..+.+|+|+||.|+.+.++ ...|+||.+.++.. -..-.|+.||..++ |+||+++++|+++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46899999999999999999987 55788998765432 12567999999997 9999999999987
Q ss_pred Ce-EEEEEEEe-cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeC
Q 046083 554 GS-LFLVYEYI-ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFG 631 (790)
Q Consensus 554 ~~-~~lv~e~~-~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfG 631 (790)
++ +||+||-- ++.+|++++..+. .+++.+..-|++|++.|+++||+.++ ||||||-+|+.++.+|-+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~i---vhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGI---VHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCc---eecccccccEEEecCCeEEEeecc
Confidence 65 78888866 4669999998754 59999999999999999999999998 999999999999999999999999
Q ss_pred CCcccccCCcccccccccCCCccchhcccCCCC-CchhhHHHHHHHHHHHHhCCcccc
Q 046083 632 LAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEV-SPKIDVYAFGVVLYELISAMEAVV 688 (790)
Q Consensus 632 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-s~~sDvwS~Gvvl~elltG~~p~~ 688 (790)
.+.+...++. ..++||..|.|||++.+..| ...-|||++|++||-++....||.
T Consensus 716 saa~~ksgpf---d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKSGPF---DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcCCCc---ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9987655443 34689999999999998887 456899999999999987777763
No 403
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=2e-25 Score=235.68 Aligned_cols=271 Identities=25% Similarity=0.326 Sum_probs=201.9
Q ss_pred cccccCHHHHHHHhcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh--HHHHHHHHHHHHhcC------CCCCc
Q 046083 476 KSVEFSYEELAKATNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA--SKEFLAELKVLTHVH------HLNLV 545 (790)
Q Consensus 476 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~--~~~~~~E~~~l~~l~------h~niv 545 (790)
.+..+.+.|++ -.+|.+....|+|-|++|-+|.+. |..||||++.... .+.=..|+++|.+|+ .-|++
T Consensus 420 GYYrv~igE~L--D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 420 GYYRVRIGELL--DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred ceEEEehhhhh--cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHH
Confidence 34455666665 367999999999999999999886 8899999997543 345577999999995 24677
Q ss_pred ceEEEE-ecCeEEEEEEEecCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC-
Q 046083 546 RLIGYC-VEGSLFLVYEYIENGNLNQHLRGSGK-DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN- 622 (790)
Q Consensus 546 ~l~g~~-~~~~~~lv~e~~~~g~L~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~- 622 (790)
+++..| ...++|||||-+.. +|.++|...+. -.|....+..++.|+.-||..|...++ +|.||||.|||+++.
T Consensus 498 rl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~v---lHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGV---LHADIKPDNILVNESK 573 (752)
T ss_pred HHHHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCe---eecccCccceEeccCc
Confidence 877644 57789999998855 99999998764 458889999999999999999999998 999999999999875
Q ss_pred CcEEEEEeCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHH
Q 046083 623 FRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVA 702 (790)
Q Consensus 623 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~ 702 (790)
..+||||||.|....... .+.+.-+..|.|||++.+..|+...|+||.||.||||.||+-.|...... +...
T Consensus 574 ~iLKLCDfGSA~~~~ene---itPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN-----~MLr 645 (752)
T KOG0670|consen 574 NILKLCDFGSASFASENE---ITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN-----QMLR 645 (752)
T ss_pred ceeeeccCcccccccccc---ccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH-----HHHH
Confidence 467999999997654221 22344566899999999999999999999999999999999888654321 1112
Q ss_pred HHHHHHcCCC-----------------------------------------Chhhhhh-hcC-CcCCCCCCHHHHHHHHH
Q 046083 703 LFEEVLRQPD-----------------------------------------PREDLQR-LVD-PRLGDDYPIDSVRKMAR 739 (790)
Q Consensus 703 ~~~~~~~~~~-----------------------------------------~~~~l~~-~~d-~~l~~~~~~~~~~~l~~ 739 (790)
++.++-...+ +..++.. ++. +.+ ..-.......|.+
T Consensus 646 l~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~-~deq~~~~~~~rd 724 (752)
T KOG0670|consen 646 LFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRL-PDEQPKIVQQLRD 724 (752)
T ss_pred HHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCC-CchhHHHHHHHHH
Confidence 2222111100 0000111 110 001 1112346678999
Q ss_pred HHHHccccCCCCCCCHHHHHHH
Q 046083 740 LARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 740 li~~Cl~~dP~~RPt~~evl~~ 761 (790)
|+..|+..||++|.|..+.+.+
T Consensus 725 LLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcC
Confidence 9999999999999999998764
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=4.6e-25 Score=216.31 Aligned_cols=238 Identities=21% Similarity=0.395 Sum_probs=177.7
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeCh--hhHHHHHHHHHHHHhc-CCCCCcceEEEEe--cCeEEEEEEE
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM--QASKEFLAELKVLTHV-HHLNLVRLIGYCV--EGSLFLVYEY 562 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~g~~~--~~~~~lv~e~ 562 (790)
+.|.+.+.||+|.||.+..++.+ ...+++|.+.. ...++|.+|...--.+ .|.||+.-|+... .+-.++++||
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~ 103 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF 103 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence 45888999999999999999987 56899998864 3457899998766666 5899999887544 3457789999
Q ss_pred ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEe-cC-CCcEEEEEeCCCcccccCC
Q 046083 563 IENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILI-DK-NFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 563 ~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl-~~-~~~~kl~DfGla~~~~~~~ 640 (790)
++.|+|.+-+...+ +.+....+++.|++.|+.|||++++ ||||||.+|||+ +. ..++||||||+.+.....
T Consensus 104 aP~gdL~snv~~~G---igE~~~K~v~~ql~SAi~fMHsknl---VHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t- 176 (378)
T KOG1345|consen 104 APRGDLRSNVEAAG---IGEANTKKVFAQLLSAIEFMHSKNL---VHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT- 176 (378)
T ss_pred CccchhhhhcCccc---ccHHHHHHHHHHHHHHHHHhhccch---hhcccccceEEEecCCccEEEeeecccccccCce-
Confidence 99999999988754 7888899999999999999999998 999999999999 33 348999999998854321
Q ss_pred cccccccccCCCccchhcccCC-----CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChh
Q 046083 641 ASVHTRLVGTFGYMPPEYAQYG-----EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRE 715 (790)
Q Consensus 641 ~~~~~~~~gt~~y~aPE~~~~~-----~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (790)
.....-+..|.+||..... ...+.+|+|.||++++.++||..||...... ......+. .+....
T Consensus 177 ---V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~---d~~Y~~~~-~w~~rk---- 245 (378)
T KOG1345|consen 177 ---VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM---DKPYWEWE-QWLKRK---- 245 (378)
T ss_pred ---ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc---CchHHHHH-HHhccc----
Confidence 1223345679999977432 3567899999999999999999999743321 11222222 222111
Q ss_pred hhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC
Q 046083 716 DLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLR 752 (790)
Q Consensus 716 ~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R 752 (790)
.+.+...+. ...+.+.++.++-+..+|++|
T Consensus 246 ------~~~~P~~F~-~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 246 ------NPALPKKFN-PFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred ------CccCchhhc-ccCHHHHHHHHHhcCCccccc
Confidence 112222221 233467788888899999999
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=7.6e-25 Score=228.26 Aligned_cols=269 Identities=23% Similarity=0.331 Sum_probs=195.0
Q ss_pred HHHHhcCcccceeeeecCceEEEEEEEC-----CceEEEEEeCh-hhHHHHHHHHHHHHhc-CCCCCcceEEEEec-CeE
Q 046083 485 LAKATNDFSMGNKIGQGGFGAVFYAELR-----GEKAAIKKMDM-QASKEFLAELKVLTHV-HHLNLVRLIGYCVE-GSL 556 (790)
Q Consensus 485 l~~~~~~f~~~~~lG~G~fg~Vy~a~~~-----g~~vavK~~~~-~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~-~~~ 556 (790)
+....+.|...++||+|.|++||++.+. .+.||+|.+.. .......+|+++|..+ .+.||+++.+++.. +..
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 3345567899999999999999999753 56899999875 4456789999999999 59999999998874 568
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC-CcEEEEEeCCCcc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN-FRAKVADFGLAKL 635 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~-~~~kl~DfGla~~ 635 (790)
.+|+||+++-...++... ++...+..+++.+..||.++|.+|+ |||||||+|+|.+.. +.-.|.|||+|..
T Consensus 111 ~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GI---vHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGI---VHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred EEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCc---cccCCCccccccccccCCceEEechhHHH
Confidence 999999999998888874 6788899999999999999999998 999999999999764 5679999999972
Q ss_pred cccCC--------------c-----------------------------ccccccccCCCccchhcccC-CCCCchhhHH
Q 046083 636 TEVGS--------------A-----------------------------SVHTRLVGTFGYMPPEYAQY-GEVSPKIDVY 671 (790)
Q Consensus 636 ~~~~~--------------~-----------------------------~~~~~~~gt~~y~aPE~~~~-~~~s~~sDvw 671 (790)
.+... . .......||+||+|||++.. ...+++.|||
T Consensus 183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw 262 (418)
T KOG1167|consen 183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW 262 (418)
T ss_pred HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence 21000 0 00012469999999998864 5689999999
Q ss_pred HHHHHHHHHHhCCccccccccccccccchHHHHH------HHH--cC-----CCC----h------hhhh-hhcCCc---
Q 046083 672 AFGVVLYELISAMEAVVKTNETITESTGLVALFE------EVL--RQ-----PDP----R------EDLQ-RLVDPR--- 724 (790)
Q Consensus 672 S~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~------~~~--~~-----~~~----~------~~l~-~~~d~~--- 724 (790)
|.|||++.+++++.||.........-..+...+. ... +. ... . +.+. +.+.+.
T Consensus 263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~ 342 (418)
T KOG1167|consen 263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP 342 (418)
T ss_pred eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence 9999999999999999876543221111111110 000 00 000 0 0010 111110
Q ss_pred -C-CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 725 -L-GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 725 -l-~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
+ ........+..+.+++.+|+..||.+|.|++|.+.+
T Consensus 343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0 001111223467899999999999999999998753
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=1.2e-23 Score=207.24 Aligned_cols=168 Identities=23% Similarity=0.269 Sum_probs=127.7
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|+|.++++..+ ..++|..++.++.|++.||.|||+++ ||+|||++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVRG-RPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeecccc-----
Confidence 68999998643 36999999999999999999999986 999999999999999 99988654321
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
..|++.|+|||++.+..++.++|||||||++|||++|+.||...... ......+....... ++.
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~-------~~~~~~~~~~~~~~-------~~~- 127 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL-------SAILEILLNGMPAD-------DPR- 127 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh-------cHHHHHHHHHhccC-------Ccc-
Confidence 25789999999999999999999999999999999999998543221 11111111110000 000
Q ss_pred CCCCCHHHHH--HHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 726 GDDYPIDSVR--KMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 726 ~~~~~~~~~~--~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
....+..... .+.+++.+||+.+|.+||++.|+++++..+.
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 128 DRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred ccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 0011122222 6899999999999999999999999988764
No 407
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=3.3e-24 Score=259.55 Aligned_cols=197 Identities=17% Similarity=0.251 Sum_probs=138.7
Q ss_pred hcCC-CCCcceEEEEe-------c-CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCcee
Q 046083 538 HVHH-LNLVRLIGYCV-------E-GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYI 608 (790)
Q Consensus 538 ~l~h-~niv~l~g~~~-------~-~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~v 608 (790)
.++| .||+.+++++. + ..++++|||+ +++|.++|... ...+++..++.++.||++||.|||++++ +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gI---v 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGI---V 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCe---e
Confidence 4455 57888888662 1 2357788887 55999999754 2469999999999999999999999998 9
Q ss_pred ecCCCCCCEEecCCC-------------------cEEEEEeCCCcccccCCc---------------ccccccccCCCcc
Q 046083 609 HRDIKPANILIDKNF-------------------RAKVADFGLAKLTEVGSA---------------SVHTRLVGTFGYM 654 (790)
Q Consensus 609 H~dlkp~NILl~~~~-------------------~~kl~DfGla~~~~~~~~---------------~~~~~~~gt~~y~ 654 (790)
||||||+||||+..+ .+|++|||+++....... .......||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 999999999996544 455666666553211000 0011245788999
Q ss_pred chhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHH
Q 046083 655 PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSV 734 (790)
Q Consensus 655 aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~ 734 (790)
|||++.+..++.++|||||||+||||++|.+|+..... ....... ..+.+.. ....
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----------~~~~~~~---------~~~~~~~-----~~~~ 238 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----------TMSSLRH---------RVLPPQI-----LLNW 238 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----------HHHHHHH---------hhcChhh-----hhcC
Confidence 99999999999999999999999999998877542111 0111100 0011110 1112
Q ss_pred HHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 735 RKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 735 ~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
.....++.+||+.+|.+||+|.|++++-.
T Consensus 239 ~~~~~~~~~~L~~~P~~Rps~~eil~h~~ 267 (793)
T PLN00181 239 PKEASFCLWLLHPEPSCRPSMSELLQSEF 267 (793)
T ss_pred HHHHHHHHHhCCCChhhCcChHHHhhchh
Confidence 34568889999999999999999987554
No 408
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.89 E-value=8.9e-24 Score=206.96 Aligned_cols=243 Identities=22% Similarity=0.375 Sum_probs=192.8
Q ss_pred ceeeeecCceEEEEEEECCceEEEEEeChh-----hHHHHHHHHHHHHhcCCCCCcceEEEEec-CeEEEEEEEecCCCh
Q 046083 495 GNKIGQGGFGAVFYAELRGEKAAIKKMDMQ-----ASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSLFLVYEYIENGNL 568 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~-----~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~~lv~e~~~~g~L 568 (790)
..+|.+...|..|+|+++|..++.|+++.. ..++|..|.-.|+-+.||||++++|.|.. ..+.++..||+.|+|
T Consensus 195 ~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 457888899999999999999888888643 34679999999999999999999999975 468999999999999
Q ss_pred hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccc
Q 046083 569 NQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLV 648 (790)
Q Consensus 569 ~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 648 (790)
+..|+....-..+-.+..+++.++++|++|||+.. |.|.---|.+..+++|++.+++|+ .+-+++.. ......
T Consensus 275 ynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris-mad~kfsf-----qe~gr~ 347 (448)
T KOG0195|consen 275 YNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS-MADTKFSF-----QEVGRA 347 (448)
T ss_pred HHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee-cccceeee-----eccccc
Confidence 99999876656788899999999999999999976 333444688999999999988875 11111110 011123
Q ss_pred cCCCccchhcccCCCCC---chhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 649 GTFGYMPPEYAQYGEVS---PKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 649 gt~~y~aPE~~~~~~~s---~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
-.+.||+||.++..+-+ .++|+|||.+++|||.|...||....+. +.--++.-..+
T Consensus 348 y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspm---------------------ecgmkialegl 406 (448)
T KOG0195|consen 348 YSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPM---------------------ECGMKIALEGL 406 (448)
T ss_pred cCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCch---------------------hhhhhhhhccc
Confidence 46899999999876543 5799999999999999999999765432 11112223345
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
+..+|+.....+.+|+.-|+..||.+||.++.|+-.|++.
T Consensus 407 rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 5667778888999999999999999999999999998875
No 409
>PRK10783 mltD membrane-bound lytic murein transglycosylase D; Provisional
Probab=99.89 E-value=3.5e-23 Score=229.45 Aligned_cols=252 Identities=17% Similarity=0.241 Sum_probs=156.9
Q ss_pred CCCcccceeEEeccCCchHHHHhhhcCCCChHHHH----HHccCCCCCCCCCCcEEEEEeeccCCCCcccCCceeEEEee
Q 046083 71 GDFLGHTFTYETQFGDTYEKVASFAFANLTTEDWV----RRVNIYEPTRIPDYAFINVTVNCSCGDRHISRDYGLFTTYP 146 (790)
Q Consensus 71 ~~~~~~~~~Y~V~~GDTl~~IA~~~~~~~~t~~~l----~~~N~~~~~~l~~Gq~l~iP~~~~~~~~~~~~~~~~~~~y~ 146 (790)
++|..+.+.|+..+|-....|.+.+..+..+..|. .+...+.+..|..-..+.-|.......+.. .+...+....
T Consensus 189 g~~~lalAAYNaG~g~v~~~~~~~~~~~~~~d~w~~~lp~ETr~YV~~~la~~~i~~~~~~~~~~~~~~-~~~~~~~~V~ 267 (456)
T PRK10783 189 GDWLLTVAAYNSGEGRVMKAIKANKAKGKPTDFWSLSLPRETKIYVPKMLALSDILKNSKRYGVRLPTT-DESRALARVD 267 (456)
T ss_pred CCHHHHHHHHcCCHhHHHHHHHHhhhcCCCccchhcCccHHHHHHHHHHHHHHHHHhhHHhcCCCCCCc-CCCCceEEEe
Confidence 34445555566666666666653333333333332 222223333333333332232222211111 1234456677
Q ss_pred cCCCCCHHHHHHHhCCChHHHhhhCCCCcc----cCCcceEEeechhhH-HHHHHHHHHHHhhhhhccccccccchhhhh
Q 046083 147 LRPAQNLSSVAAEAGVAPQSLQRYNPGTNF----SAGTGLVFVPARVFE-LKLALLLVLAFFCARRRVEAVAECSKGCDL 221 (790)
Q Consensus 147 v~~gd~l~~ia~~~~~~~~~l~~~N~~~~~----~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (790)
+..+.+|..||+++|+++++|..+||+... +.+...+++|..... +...+...............+.. .
T Consensus 268 v~~~i~L~~iA~~~gvs~~eL~~LNP~~kr~~t~p~g~~~llvP~~~~~~f~~~l~~~~~~~~~p~~~~~~~~------~ 341 (456)
T PRK10783 268 LGQQIELAQAAEMAGMSLTKLKTFNAGYKRSTTAPSGPHYIMVPKKHADQLRESLASGEIAAVQSTLVADNTP------L 341 (456)
T ss_pred cCCCcCHHHHHHHcCCCHHHHHHhCccccCCCcCCCCCeEEEecCchhhHHHHhhhhhhhhhcccccccccCc------C
Confidence 878889999999999999999999996442 234567778864322 21111100000000000000000 1
Q ss_pred hheeeecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEeccccccCCCceeeeeEEEEeccCchHHHHHHH
Q 046083 222 ALASYYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVPFSCNCIQNKFLGHSFSYKVKSGNTYKRIAEL 301 (790)
Q Consensus 222 ~~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip~~~~~~~~~~~~~~~~y~V~~gDtl~~IA~~ 301 (790)
.+..|+|++||||++||++||+++.+|+++| ++.. +.|.+||.|.||.++.+..........+|+|++|||||+|| +
T Consensus 342 ~~~~y~Vk~GDTL~sIA~r~gvs~~~L~~~N-~l~~-~~L~~Gq~L~Ip~~~~~~~~~~~~~~~~Y~Vr~GDTL~sIA-~ 418 (456)
T PRK10783 342 NSRSYKVRSGDTLSGIASRLNVSTKDLQQWN-NLRG-SKLKVGQTLTIGAGSSAQRLANNSDSITYRVRKGDSLSSIA-K 418 (456)
T ss_pred CceEEEECCCCcHHHHHHHHCcCHHHHHHHc-CCCc-ccCCCCCEEEecCCcccccccccccceeEEeCCCCCHHHHH-H
Confidence 3457999999999999999999999999999 6644 78999999999988765422222334679999999999999 5
Q ss_pred hhcccccHHHHHhcCCCCCCCCCCCCcEEEEeEe
Q 046083 302 IYANLTTLDWLKSSNAYDENHTPDVSSSVNVIVN 335 (790)
Q Consensus 302 ~~~~l~~~~~l~~~N~~~~~~~~~~Gq~l~ip~~ 335 (790)
+|. +++++|++||++..+.|.+ ||+|.|++.
T Consensus 419 kyg--Vtv~~L~~~N~l~~~~L~p-Gq~L~l~v~ 449 (456)
T PRK10783 419 RHG--VNIKDVMRWNSDTAKNLQP-GDKLTLFVK 449 (456)
T ss_pred HhC--CCHHHHHHhcCCCCCcCCC-CCEEEEecC
Confidence 565 7889999999976666666 999999875
No 410
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=2e-21 Score=210.02 Aligned_cols=160 Identities=21% Similarity=0.207 Sum_probs=125.9
Q ss_pred HhcCcccceeeeecCceEEEEEEEC---CceEEEEEeChh--------hHHHHHHHHHHHHhcCCCCCcceEEEEecCeE
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELR---GEKAAIKKMDMQ--------ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSL 556 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~---g~~vavK~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~ 556 (790)
..++|.+.+.||+|+||+||+|.+. +..+|||++... ..+.|.+|+++|++++|+|+++.+.. .+..
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~--~~~~ 93 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA--TGKD 93 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE--cCCc
Confidence 3467999999999999999999864 567899986422 24568999999999999999864322 2457
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCC-CCCCEEecCCCcEEEEEeCCCcc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDI-KPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dl-kp~NILl~~~~~~kl~DfGla~~ 635 (790)
|+||||+++++|... ... . ...++.+++++|.|||++++ +|||| ||+|||++.++.+||+|||+++.
T Consensus 94 ~LVmE~~~G~~L~~~-~~~-----~---~~~~~~~i~~aL~~lH~~gI---iHrDL~KP~NILv~~~~~ikLiDFGlA~~ 161 (365)
T PRK09188 94 GLVRGWTEGVPLHLA-RPH-----G---DPAWFRSAHRALRDLHRAGI---THNDLAKPQNWLMGPDGEAAVIDFQLASV 161 (365)
T ss_pred EEEEEccCCCCHHHh-Ccc-----c---hHHHHHHHHHHHHHHHHCCC---eeCCCCCcceEEEcCCCCEEEEECcccee
Confidence 999999999999732 211 1 14577899999999999998 99999 99999999999999999999997
Q ss_pred cccCCccc-------ccccccCCCccchhcccC
Q 046083 636 TEVGSASV-------HTRLVGTFGYMPPEYAQY 661 (790)
Q Consensus 636 ~~~~~~~~-------~~~~~gt~~y~aPE~~~~ 661 (790)
........ .....+++.|+|||++..
T Consensus 162 ~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 162 FRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 65432111 134567888999999854
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=3.6e-20 Score=200.59 Aligned_cols=256 Identities=22% Similarity=0.285 Sum_probs=190.4
Q ss_pred CcccceeeeecCceEEEEEEECC---ceEEEEEeChhh---HHHHHHHHHHHHhcCC----CCCcceEEEEe-c-CeEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELRG---EKAAIKKMDMQA---SKEFLAELKVLTHVHH----LNLVRLIGYCV-E-GSLFL 558 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~g---~~vavK~~~~~~---~~~~~~E~~~l~~l~h----~niv~l~g~~~-~-~~~~l 558 (790)
+|.+.++||+|+||.||.+.... ..+|+|...... ...+..|..++..+.+ +++..+++... . ...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999999864 368888765432 1267888999988863 57888887773 3 34789
Q ss_pred EEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC-----CcEEEEEeCCC
Q 046083 559 VYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN-----FRAKVADFGLA 633 (790)
Q Consensus 559 v~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~-----~~~kl~DfGla 633 (790)
||+.+ |.+|.++........++..+.++++.|++.+|++||+.|. +||||||.|+++... ..+.|.|||++
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~---iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGF---IHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCc---ccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99887 6699998866555679999999999999999999999998 999999999999765 46899999999
Q ss_pred c--ccccCCc-----cc--ccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHH
Q 046083 634 K--LTEVGSA-----SV--HTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALF 704 (790)
Q Consensus 634 ~--~~~~~~~-----~~--~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 704 (790)
+ .+..... .. .....||..|.+++...+...+.+.|+||++.++.|++.|..||........ ...+
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-----~~~~ 249 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-----KSKF 249 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-----HHHH
Confidence 8 3221111 11 1235699999999999999999999999999999999999999865443210 1111
Q ss_pred HHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhccC
Q 046083 705 EEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLSSS 768 (790)
Q Consensus 705 ~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~~~ 768 (790)
...... ..... .....+..+.++...+-..+...+|....+...|......
T Consensus 250 ~~~~~~--------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 250 EKDPRK--------LLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred HHHhhh--------hcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 111100 00000 1112334566666666678999999999999988776443
No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.82 E-value=1.3e-18 Score=186.92 Aligned_cols=256 Identities=30% Similarity=0.523 Sum_probs=193.7
Q ss_pred cccceeeeecCceEEEEEEECCceEEEEEeChh------hHHHHHHHHHHHHhcCCC-CCcceEEEEecCe-EEEEEEEe
Q 046083 492 FSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQ------ASKEFLAELKVLTHVHHL-NLVRLIGYCVEGS-LFLVYEYI 563 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~------~~~~~~~E~~~l~~l~h~-niv~l~g~~~~~~-~~lv~e~~ 563 (790)
|.....||.|+||.||++... ..+++|.+... ....+.+|+.++..+.|+ +++++++++.... .+++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 667889999999999999988 78888888632 356789999999999988 7999999886544 69999999
Q ss_pred cCCChhhhhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC-cEEEEEeCCCcccccCCc
Q 046083 564 ENGNLNQHLRGSGK-DTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEVGSA 641 (790)
Q Consensus 564 ~~g~L~~~l~~~~~-~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~-~~kl~DfGla~~~~~~~~ 641 (790)
.+++|.+++..... ..+.......+..+++.++.|+|+.++ +|||+||+||+++..+ .++++|||+++.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~---~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGI---IHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCe---eccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 99999977765432 258889999999999999999999997 9999999999999988 799999999985543322
Q ss_pred c-----cccccccCCCccchhcccC---CCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC
Q 046083 642 S-----VHTRLVGTFGYMPPEYAQY---GEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 642 ~-----~~~~~~gt~~y~aPE~~~~---~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
. ......|+..|++||.+.. ...+...|+||+|++++++++|..|+...... .........+......
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS----SATSQTLKIILELPTP 233 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc----ccHHHHHHHHHhcCCc
Confidence 1 2345689999999999987 57899999999999999999999996443221 0011111111111110
Q ss_pred hhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 714 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
.................+.+++..|+..+|..|.++.+....
T Consensus 234 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 ------SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ------ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000001223567899999999999999999887764
No 413
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=3.1e-19 Score=180.32 Aligned_cols=255 Identities=22% Similarity=0.280 Sum_probs=192.9
Q ss_pred cCcccceeeeecCceEEEEEEE--CCceEEEEEeCh-hhHHHHHHHHHHHHhcC-CCCCcceEEEEecCe-EEEEEEEec
Q 046083 490 NDFSMGNKIGQGGFGAVFYAEL--RGEKAAIKKMDM-QASKEFLAELKVLTHVH-HLNLVRLIGYCVEGS-LFLVYEYIE 564 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~--~g~~vavK~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~-~~lv~e~~~ 564 (790)
-+|.++++||+|.||..+.|+. .++.||||.-.. ....++..|.+.++.+. .+.|...|-|-.++- -.||+|.+
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL- 106 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL- 106 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-
Confidence 3588999999999999999975 499999997654 45567889999999884 678888776655553 46899988
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC-----cEEEEEeCCCcccccC
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF-----RAKVADFGLAKLTEVG 639 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~-----~~kl~DfGla~~~~~~ 639 (790)
|.+|.|++.-.++ .++.+++..++.|++.-++|+|++.. |.|||||+|+||...+ .+.|+|||+|+.+...
T Consensus 107 GPSLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH~k~L---IYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 107 GPSLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVHEKDL---IYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred CcCHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHHhcce---eecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 6799998887764 69999999999999999999999998 9999999999996543 5899999999987544
Q ss_pred Ccc------cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC
Q 046083 640 SAS------VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 640 ~~~------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
.+. ......||..||+-....+.+.+.+.|+-|+|-++++.|-|..||...... ....-.+.+-+...
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-----tnK~kYeKIGe~Kr- 256 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-----TNKEKYEKIGETKR- 256 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-----chHHHHHHhccccc-
Confidence 332 223467999999999999999999999999999999999999999875432 11112222221111
Q ss_pred hhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 714 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
...+.++. . ..+.++..-++-.-..+-++-|..+-+...+..
T Consensus 257 ~T~i~~Lc-----~----g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~d 298 (449)
T KOG1165|consen 257 STPIEVLC-----E----GFPEEFATYLRYVRRLDFFETPDYDYLRKLFDD 298 (449)
T ss_pred cCCHHHHH-----h----cCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 01122221 1 234566666666667788888997665554443
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=4e-20 Score=212.86 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=181.7
Q ss_pred ccceeeeecCceEEEEEEEC--CceEEEEEe-----ChhhH----HHHHHHHHHHHhcCCCCCcceEEEEecC-eEEEEE
Q 046083 493 SMGNKIGQGGFGAVFYAELR--GEKAAIKKM-----DMQAS----KEFLAELKVLTHVHHLNLVRLIGYCVEG-SLFLVY 560 (790)
Q Consensus 493 ~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~-----~~~~~----~~~~~E~~~l~~l~h~niv~l~g~~~~~-~~~lv~ 560 (790)
...+.+|.|.+|.|+..... .+..+.|.. ..... ..+..|+.+-..++|+|++..+..+.+. ..+-.|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 35789999999988777543 333333322 11111 1255677777888999997776654433 233449
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCC
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~ 640 (790)
||+++ +|+.++...+ .+....+..++.|++.|+.|||+.|+ .|||+|++|+++..++.+||+|||.+.......
T Consensus 401 E~~~~-Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~Gi---ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~ 474 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMGL---AHRDLKLENLLVTENGILKIIDFGAASVFRYPW 474 (601)
T ss_pred hcccH-HHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcCc---eeccCccccEEEecCCceEEeecCcceeeccCc
Confidence 99999 9999998753 47788888999999999999999998 999999999999999999999999998665433
Q ss_pred c---ccccccccCCCccchhcccCCCCCc-hhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhh
Q 046083 641 A---SVHTRLVGTFGYMPPEYAQYGEVSP-KIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPRED 716 (790)
Q Consensus 641 ~---~~~~~~~gt~~y~aPE~~~~~~~s~-~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 716 (790)
. ......+|+..|+|||.+.+.+|++ ..||||.|+++..|++|+.||.......... ... .... .
T Consensus 475 e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-------~~~-~~~~---~ 543 (601)
T KOG0590|consen 475 EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-------KTN-NYSD---Q 543 (601)
T ss_pred chhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-------hhh-cccc---c
Confidence 3 2334578999999999999999986 5899999999999999999997765432111 000 0000 0
Q ss_pred hhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 046083 717 LQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALM 763 (790)
Q Consensus 717 l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~ 763 (790)
...... ........+.+...++.+||+.+|.+|-|+++|++.=|
T Consensus 544 -~~~~~~--~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W 587 (601)
T KOG0590|consen 544 -RNIFEG--PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEW 587 (601)
T ss_pred -cccccC--hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChH
Confidence 000000 00112345667889999999999999999999987443
No 415
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.79 E-value=8e-19 Score=170.00 Aligned_cols=257 Identities=22% Similarity=0.264 Sum_probs=189.5
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeChhh-HHHHHHHHHHHHhcCC-CCCcceEEEEecCe-EEEEEEEe
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQA-SKEFLAELKVLTHVHH-LNLVRLIGYCVEGS-LFLVYEYI 563 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~-~~~~~~E~~~l~~l~h-~niv~l~g~~~~~~-~~lv~e~~ 563 (790)
...|.+.++||+|+||.+|.|..- |+.||||.-+... ...+.-|.++++.++| ..|..+..|..+.+ -.+||+.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL 93 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL 93 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc
Confidence 357999999999999999999864 9999999876433 3457778999999975 45555666665544 58999988
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC---CcEEEEEeCCCcccccCC
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN---FRAKVADFGLAKLTEVGS 640 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~---~~~kl~DfGla~~~~~~~ 640 (790)
|.+|.+++.-..+ .++.++.+-++-|++.-++|+|.++. +||||||+|+|..-+ ..+.|+|||+++.+....
T Consensus 94 -GPsLEdLfnfC~R-~ftmkTvLMLaDQml~RiEyvH~r~f---iHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~ 168 (341)
T KOG1163|consen 94 -GPSLEDLFNFCSR-RFTMKTVLMLADQMLSRIEYVHLRNF---IHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR 168 (341)
T ss_pred -CccHHHHHHHHhh-hhhHHhHHHHHHHHHHHHHHHHhhcc---ccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence 7799998876543 68999999999999999999999997 999999999999643 468999999999764332
Q ss_pred cc------cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 641 AS------VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 641 ~~------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
.. ......||..|.+-....+.+.+.+.|+-|+|.+|..+.-|..||....... ..+-.+.+.+....
T Consensus 169 t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~t-----k~QKyEkI~EkK~s- 242 (341)
T KOG1163|consen 169 TRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAAT-----KKQKYEKISEKKMS- 242 (341)
T ss_pred ccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhh-----HHHHHHHHHHhhcC-
Confidence 22 2234679999999998888889999999999999999999999997654321 11112222221110
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
..+. .+... .+.++...+.-|-..--++-|...-+-+.+..+
T Consensus 243 ~~ie-----~LC~G----~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriL 284 (341)
T KOG1163|consen 243 TPIE-----VLCKG----FPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRIL 284 (341)
T ss_pred CCHH-----HHhCC----CcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHH
Confidence 0011 12222 235677778888888888888876655544443
No 416
>PRK10783 mltD membrane-bound lytic murein transglycosylase D; Provisional
Probab=99.78 E-value=9.4e-19 Score=194.25 Aligned_cols=168 Identities=17% Similarity=0.171 Sum_probs=127.4
Q ss_pred hHhhhcccCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCC-CeEEeeeecccC-----C--------C-----CCc
Q 046083 14 LALASYYVWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSD-TRISIPFSCDCL-----N--------G-----DFL 74 (790)
Q Consensus 14 ~~~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g-~~l~ip~~~~~~-----~--------~-----~~~ 74 (790)
..+..+.|..+.+|..||+++|+++++|+.+||+++.....+.| +.|.||...... . . ...
T Consensus 261 ~~~~~V~v~~~i~L~~iA~~~gvs~~eL~~LNP~~kr~~t~p~g~~~llvP~~~~~~f~~~l~~~~~~~~~p~~~~~~~~ 340 (456)
T PRK10783 261 RALARVDLGQQIELAQAAEMAGMSLTKLKTFNAGYKRSTTAPSGPHYIMVPKKHADQLRESLASGEIAAVQSTLVADNTP 340 (456)
T ss_pred CceEEEecCCCcCHHHHHHHcCCCHHHHHHhCccccCCCcCCCCCeEEEecCchhhHHHHhhhhhhhhhcccccccccCc
Confidence 34556677777899999999999999999999999765555556 778888853210 0 0 001
Q ss_pred ccceeEEeccCCchHHHHhhhcCCCChHHHHHHccCCCCCCCCCCcEEEEEeeccCCCCcccCCceeEEEeecCCCCCHH
Q 046083 75 GHTFTYETQFGDTYEKVASFAFANLTTEDWVRRVNIYEPTRIPDYAFINVTVNCSCGDRHISRDYGLFTTYPLRPAQNLS 154 (790)
Q Consensus 75 ~~~~~Y~V~~GDTl~~IA~~~~~~~~t~~~l~~~N~~~~~~l~~Gq~l~iP~~~~~~~~~~~~~~~~~~~y~v~~gd~l~ 154 (790)
.....|+|++||||++|| ++|+. +...|+++|.+.++.|.+||+|.||..+.+... .......+|+|++||||+
T Consensus 341 ~~~~~y~Vk~GDTL~sIA-~r~gv--s~~~L~~~N~l~~~~L~~Gq~L~Ip~~~~~~~~---~~~~~~~~Y~Vr~GDTL~ 414 (456)
T PRK10783 341 LNSRSYKVRSGDTLSGIA-SRLNV--STKDLQQWNNLRGSKLKVGQTLTIGAGSSAQRL---ANNSDSITYRVRKGDSLS 414 (456)
T ss_pred CCceEEEECCCCcHHHHH-HHHCc--CHHHHHHHcCCCcccCCCCCEEEecCCcccccc---cccccceeEEeCCCCCHH
Confidence 124579999999999999 78865 778899999776688999999999976544211 112224689999999999
Q ss_pred HHHHHhCCChHHHhhhCCCC-cccCCcceEEeec
Q 046083 155 SVAAEAGVAPQSLQRYNPGT-NFSAGTGLVFVPA 187 (790)
Q Consensus 155 ~ia~~~~~~~~~l~~~N~~~-~~~~~~~~~~~p~ 187 (790)
+||++||+++++|+++|+.. +...+++.+.++.
T Consensus 415 sIA~kygVtv~~L~~~N~l~~~~L~pGq~L~l~v 448 (456)
T PRK10783 415 SIAKRHGVNIKDVMRWNSDTAKNLQPGDKLTLFV 448 (456)
T ss_pred HHHHHhCCCHHHHHHhcCCCCCcCCCCCEEEEec
Confidence 99999999999999999843 2566677666653
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=1.2e-18 Score=175.38 Aligned_cols=173 Identities=16% Similarity=0.178 Sum_probs=134.1
Q ss_pred HHHHHH--HhcCcccceeeeecCceEEEEEEECCceEEEEEeChhh--H----HH------HHHHHHHHHhcCCCCCcce
Q 046083 482 YEELAK--ATNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQA--S----KE------FLAELKVLTHVHHLNLVRL 547 (790)
Q Consensus 482 ~~~l~~--~~~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~--~----~~------~~~E~~~l~~l~h~niv~l 547 (790)
|.++.. -.++|+..+.||.|+||.||.+...+..+|||.+..+. . .. +.+|++.+.++.|++|..+
T Consensus 21 ~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~ 100 (232)
T PRK10359 21 YKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASL 100 (232)
T ss_pred HHHHHHHHhhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcc
Confidence 444433 35789999999999999999987778899999996421 1 11 5789999999999999999
Q ss_pred EEEEec---------CeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEE
Q 046083 548 IGYCVE---------GSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANIL 618 (790)
Q Consensus 548 ~g~~~~---------~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NIL 618 (790)
..+... +..+++|||++|.+|.++.. ++. ....+++.+|..||..++ +|||++|+||+
T Consensus 101 ~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi---~H~Dikp~Nil 167 (232)
T PRK10359 101 NDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGM---VSGDPHKGNFI 167 (232)
T ss_pred eEeeeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCC---ccCCCChHHEE
Confidence 887542 24789999999999988742 222 245589999999999998 99999999999
Q ss_pred ecCCCcEEEEEeCCCcccccCCcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHH
Q 046083 619 IDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELI 681 (790)
Q Consensus 619 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ell 681 (790)
++.++ ++|+|||........... ..+.....+..++|+||||+.+.-+.
T Consensus 168 i~~~g-i~liDfg~~~~~~e~~a~-------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 168 VSKNG-LRIIDLSGKRCTAQRKAK-------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EeCCC-EEEEECCCcccccchhhH-------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99988 999999988754211110 11334445667999999999988765
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=5e-18 Score=167.11 Aligned_cols=184 Identities=17% Similarity=0.159 Sum_probs=142.0
Q ss_pred ccceeeeecCceEEEEEEECCceEEEEEeChhhH-------HHHHHHHHHHHhcC-CCCCcceEEEEecCeEEEEEEEec
Q 046083 493 SMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS-------KEFLAELKVLTHVH-HLNLVRLIGYCVEGSLFLVYEYIE 564 (790)
Q Consensus 493 ~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~~-------~~~~~E~~~l~~l~-h~niv~l~g~~~~~~~~lv~e~~~ 564 (790)
.....|++|+||+||.+...+.+++.+.++.... ..+.+|+++|+++. |+++.+++++ ...+++|||+.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---~~~~lvmeyI~ 81 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---DGRHLDRSYLA 81 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---cCEEEEEeeec
Confidence 3467899999999998888888998887764322 24789999999995 5889999886 34699999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCC-CCCCEEecCCCcEEEEEeCCCcccccCCcc-
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDI-KPANILIDKNFRAKVADFGLAKLTEVGSAS- 642 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dl-kp~NILl~~~~~~kl~DfGla~~~~~~~~~- 642 (790)
|.+|...+... ...++.+++++|.++|++++ +|||| ||+|||++.++.++|+|||++.........
T Consensus 82 G~~L~~~~~~~---------~~~~~~qi~~~L~~lH~~GI---vHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 82 GAAMYQRPPRG---------DLAYFRAARRLLQQLHRCGV---AHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred CccHHhhhhhh---------hHHHHHHHHHHHHHHHHCcC---ccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 99987644211 13467889999999999998 99999 799999999999999999999865433311
Q ss_pred ---c--------ccccccCCCccchhcccCC-CCC-chhhHHHHHHHHHHHHhCCccccccc
Q 046083 643 ---V--------HTRLVGTFGYMPPEYAQYG-EVS-PKIDVYAFGVVLYELISAMEAVVKTN 691 (790)
Q Consensus 643 ---~--------~~~~~gt~~y~aPE~~~~~-~~s-~~sDvwS~Gvvl~elltG~~p~~~~~ 691 (790)
. ......++.|++|+...-. ..+ .+.+.++-|.-+|.++|++.+.....
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 0 0112357788888855432 333 57889999999999999988865543
No 419
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.76 E-value=2.9e-18 Score=170.51 Aligned_cols=135 Identities=18% Similarity=0.177 Sum_probs=106.7
Q ss_pred ceeeeecCceEEEEEEEC-CceEEEEEeChhhH------------HH-----------------HHHHHHHHHhcCCCCC
Q 046083 495 GNKIGQGGFGAVFYAELR-GEKAAIKKMDMQAS------------KE-----------------FLAELKVLTHVHHLNL 544 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~~~------------~~-----------------~~~E~~~l~~l~h~ni 544 (790)
.+.||+|+||.||+|... |+.||||+++.... .. ...|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 468999999999999885 89999999864210 11 2349999999988876
Q ss_pred cceEEEEecCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCceeecCCCCCCEEecCCC
Q 046083 545 VRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYI-HEHTVPVYIHRDIKPANILIDKNF 623 (790)
Q Consensus 545 v~l~g~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~~vH~dlkp~NILl~~~~ 623 (790)
.....+... ..++||||+++++|...+... ..+++....+++.|++.+|.+| |+.++ +||||||+|||++ ++
T Consensus 82 ~~p~~~~~~-~~~iVmE~i~g~~l~~~~~~~--~~~~~~~~~~i~~qi~~~L~~l~H~~gi---iHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILLK-SHVLVMEFIGDDGWAAPRLKD--APLSESKARELYLQVIQIMRILYQDCRL---VHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEec-CCEEEEEEeCCCCCcchhhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCc---ccCCCCHHHEEEE-CC
Confidence 544333222 248999999998776553322 3588999999999999999999 68888 9999999999998 47
Q ss_pred cEEEEEeCCCccc
Q 046083 624 RAKVADFGLAKLT 636 (790)
Q Consensus 624 ~~kl~DfGla~~~ 636 (790)
.++|+|||++...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999999754
No 420
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=2.5e-18 Score=189.00 Aligned_cols=218 Identities=25% Similarity=0.421 Sum_probs=162.2
Q ss_pred HHhcCCCCCcceEEEEecC-eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCC
Q 046083 536 LTHVHHLNLVRLIGYCVEG-SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKP 614 (790)
Q Consensus 536 l~~l~h~niv~l~g~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp 614 (790)
|+.+.|.|+.+++|.+.++ ..+.|.+|+..|+|.+.+... ...++|.....++++++.||+|||+-.+ ..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-~~~~d~~F~~s~~rdi~~Gl~ylh~s~i--~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-DIKLDYFFILSFIRDISKGLAYLHNSPI--GYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-ccCccHHHHHHHHHHHHHHHHHHhcCcc--eeeeeecc
Confidence 3568999999999999865 588999999999999999874 3569999999999999999999999876 39999999
Q ss_pred CCEEecCCCcEEEEEeCCCcccccCC-cccccccccCCCccchhcccCC-------CCCchhhHHHHHHHHHHHHhCCcc
Q 046083 615 ANILIDKNFRAKVADFGLAKLTEVGS-ASVHTRLVGTFGYMPPEYAQYG-------EVSPKIDVYAFGVVLYELISAMEA 686 (790)
Q Consensus 615 ~NILl~~~~~~kl~DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-------~~s~~sDvwS~Gvvl~elltG~~p 686 (790)
+|+++|..+.+||+|||+........ ........-..-|.|||.+... ..+.+.||||||++++|+++.+.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 99999999999999999988764210 0111112234579999998753 257789999999999999999999
Q ss_pred ccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhhc
Q 046083 687 VVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTLS 766 (790)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l~ 766 (790)
|......... ......+.... ...+.|.+... .+...++..++..||..+|++||++++|-..+..+.
T Consensus 158 ~~~~~~~~~~----~eii~~~~~~~------~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~ 225 (484)
T KOG1023|consen 158 FDLRNLVEDP----DEIILRVKKGG------SNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTIN 225 (484)
T ss_pred cccccccCCh----HHHHHHHHhcC------CCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhc
Confidence 9765433211 11111111100 01111111111 033347889999999999999999999998888765
Q ss_pred cC
Q 046083 767 SS 768 (790)
Q Consensus 767 ~~ 768 (790)
..
T Consensus 226 ~~ 227 (484)
T KOG1023|consen 226 KG 227 (484)
T ss_pred cc
Confidence 54
No 421
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.75 E-value=1.7e-17 Score=165.45 Aligned_cols=135 Identities=17% Similarity=0.159 Sum_probs=109.2
Q ss_pred ceeeeecCceEEEEEEEC-CceEEEEEeChhh-----------------------------HHHHHHHHHHHHhcCCCCC
Q 046083 495 GNKIGQGGFGAVFYAELR-GEKAAIKKMDMQA-----------------------------SKEFLAELKVLTHVHHLNL 544 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~~-----------------------------~~~~~~E~~~l~~l~h~ni 544 (790)
.+.||+|+||.||+|... |+.||||.++... ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 578999999999999986 9999999986421 1123578999999999988
Q ss_pred cceEEEEecCeEEEEEEEecCCChhhh-hhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCC
Q 046083 545 VRLIGYCVEGSLFLVYEYIENGNLNQH-LRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKN 622 (790)
Q Consensus 545 v~l~g~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~ 622 (790)
.....+... ..++||||++++++... +.. ..++.....+++.+++.++.+||+ .++ +||||||+|||++ +
T Consensus 82 ~~p~~~~~~-~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~gi---vHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLK-KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAGL---VHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEec-CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCCE---ecCCCChhhEEEE-C
Confidence 655544333 24899999998865443 432 247788899999999999999999 897 9999999999999 7
Q ss_pred CcEEEEEeCCCcccc
Q 046083 623 FRAKVADFGLAKLTE 637 (790)
Q Consensus 623 ~~~kl~DfGla~~~~ 637 (790)
+.++|+|||++....
T Consensus 154 ~~~~liDFG~a~~~~ 168 (190)
T cd05145 154 GKPYIIDVSQAVELD 168 (190)
T ss_pred CCEEEEEcccceecC
Confidence 899999999998654
No 422
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.73 E-value=2.3e-17 Score=170.97 Aligned_cols=227 Identities=22% Similarity=0.317 Sum_probs=146.5
Q ss_pred CcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCC----------CCCcceEEE--
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHH----------LNLVRLIGY-- 550 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h----------~niv~l~g~-- 550 (790)
.+...+.||.|+++.||.+++. ++.+|+|.+-. ...+++++|.-....+.+ -.++..++.
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3456789999999999999997 69999998742 234566666655554332 122221111
Q ss_pred -------Ee---cC------eEEEEEEEecCCChhhhhhc---CC--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCceee
Q 046083 551 -------CV---EG------SLFLVYEYIENGNLNQHLRG---SG--KDTLTWSARMQIALDSARGLEYIHEHTVPVYIH 609 (790)
Q Consensus 551 -------~~---~~------~~~lv~e~~~~g~L~~~l~~---~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH 609 (790)
.. +. ..+++|+-+. ++|.+++.. .. ...+....++.+..|+++.+++||+.|+ +|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl---VH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL---VH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE---EE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce---Ee
Confidence 11 11 1367888774 488887542 21 1235566778888999999999999998 99
Q ss_pred cCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccccCCCccchhcccC--------CCCCchhhHHHHHHHHHHHH
Q 046083 610 RDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQY--------GEVSPKIDVYAFGVVLYELI 681 (790)
Q Consensus 610 ~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~s~~sDvwS~Gvvl~ell 681 (790)
+||+|+|++++++|.+.|+||+......... .. ...+..|.+||.... -.++.+.|.|++|+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~---~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRY---RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEE---EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCcee---ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 9999999999999999999998776443211 11 234578999997743 24788999999999999999
Q ss_pred hCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCC
Q 046083 682 SAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLR 752 (790)
Q Consensus 682 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~R 752 (790)
+|..||........... .. ..+. +.++.+..||..+|+.+|++|
T Consensus 245 C~~lPf~~~~~~~~~~~-------------------------~f-~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADPEW-------------------------DF-SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTSGG-------------------------GG-TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccccc-------------------------cc-hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999865433211000 01 1233 667789999999999999988
No 423
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.72 E-value=5.5e-18 Score=194.12 Aligned_cols=242 Identities=23% Similarity=0.254 Sum_probs=171.0
Q ss_pred CcccceeeeecCceEEEEEEECCceEEEEEeChh----hHHHHHHHHHH--HHhcCCCCCcceEEEEec-CeEEEEEEEe
Q 046083 491 DFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQ----ASKEFLAELKV--LTHVHHLNLVRLIGYCVE-GSLFLVYEYI 563 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~----~~~~~~~E~~~--l~~l~h~niv~l~g~~~~-~~~~lv~e~~ 563 (790)
++...+.||++.|=.|.+|+.+...++||++-.. ..+.|.++++- ...++|||.+++.-+-.. .-.|||=+|+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv 103 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV 103 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence 5777899999999999999998777999987432 22344433333 455589999988655432 2357888888
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccc--cCCc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE--VGSA 641 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~--~~~~ 641 (790)
.+ +|+|.|..+ +-+...+...|+.|++.||.-+|..++ +|||||.+|||++.-.-+.|+||..-+... ..+.
T Consensus 104 kh-nLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~gV---cHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 104 KH-NLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKLGV---CHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred hh-hhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHcCc---cccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 77 899888754 347778888999999999999999999 999999999999998889999998665321 1111
Q ss_pred cccc----ccccCCCccchhcccCC-----------CCCchhhHHHHHHHHHHHHhC-CccccccccccccccchHHHHH
Q 046083 642 SVHT----RLVGTFGYMPPEYAQYG-----------EVSPKIDVYAFGVVLYELISA-MEAVVKTNETITESTGLVALFE 705 (790)
Q Consensus 642 ~~~~----~~~gt~~y~aPE~~~~~-----------~~s~~sDvwS~Gvvl~elltG-~~p~~~~~~~~~~~~~~~~~~~ 705 (790)
.... .-..-.+|+|||.+-.. ..+++.||||+||++.||++- +++|.. .+++.
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L-----------SQL~a 246 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL-----------SQLLA 246 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH-----------HHHHh
Confidence 1111 11223589999977431 267899999999999999984 666532 11111
Q ss_pred HHHc-CCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 046083 706 EVLR-QPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVA 761 (790)
Q Consensus 706 ~~~~-~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~ 761 (790)
---. .......++++-|+ .+++|+..|++.||++|-++++.++.
T Consensus 247 Yr~~~~~~~e~~Le~Ied~------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 247 YRSGNADDPEQLLEKIEDV------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HhccCccCHHHHHHhCcCc------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 1111 11111122222222 46789999999999999999999876
No 424
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=2.4e-18 Score=188.71 Aligned_cols=237 Identities=24% Similarity=0.345 Sum_probs=181.8
Q ss_pred eeecCceEEEEEEE-----CCceEEEEEeChh-----hHHHHHHHHHHHHhcC-CCCCcceEEEE-ecCeEEEEEEEecC
Q 046083 498 IGQGGFGAVFYAEL-----RGEKAAIKKMDMQ-----ASKEFLAELKVLTHVH-HLNLVRLIGYC-VEGSLFLVYEYIEN 565 (790)
Q Consensus 498 lG~G~fg~Vy~a~~-----~g~~vavK~~~~~-----~~~~~~~E~~~l~~l~-h~niv~l~g~~-~~~~~~lv~e~~~~ 565 (790)
+|+|.||.|+.++. .+..+|.|.++.. .......|..++..++ ||.++++.-.+ .++..+++++|..+
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 68999999996542 3666777766532 1124556788888886 99999997654 47789999999999
Q ss_pred CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCccccc
Q 046083 566 GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHT 645 (790)
Q Consensus 566 g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 645 (790)
|.|...+.... .++......+...++-+++++|+.++ +|||+|++||+++.+|.+++.|||+++..-...
T Consensus 82 g~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~i---iyrd~k~enilld~~Ghi~~tdfglske~v~~~----- 151 (612)
T KOG0603|consen 82 GDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLGI---AYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK----- 151 (612)
T ss_pred chhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhHH---HHhcccccceeecccCccccCCchhhhHhHhhh-----
Confidence 99998887654 46667777788889999999999998 999999999999999999999999998643222
Q ss_pred ccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcC
Q 046083 646 RLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRL 725 (790)
Q Consensus 646 ~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l 725 (790)
..+||..|||||++. ......|.||||++++||+||..||.. +....++..+
T Consensus 152 ~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-------------------------~~~~~Il~~~- 203 (612)
T KOG0603|consen 152 IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-------------------------DTMKRILKAE- 203 (612)
T ss_pred hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-------------------------HHHHHHhhhc-
Confidence 128899999999998 567789999999999999999998854 0111222111
Q ss_pred CCCCCHHHHHHHHHHHHHccccCCCCCCCH--HHHHHHHHhhccCCccCC
Q 046083 726 GDDYPIDSVRKMARLARACTQENPQLRPSM--RAIVVALMTLSSSSEDWD 773 (790)
Q Consensus 726 ~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~--~evl~~L~~l~~~~~~~~ 773 (790)
...|........+++..++..+|.+|--. ..+.+.++--...+.+|.
T Consensus 204 -~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 204 -LEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred -cCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 24466677778889999999999999654 455555555555666664
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.68 E-value=4.3e-16 Score=156.47 Aligned_cols=132 Identities=17% Similarity=0.255 Sum_probs=102.6
Q ss_pred ccceeeeecCceEEEEEEECCceEEEEEeChh---hHHHHHHHHHHHHhc-----CCCCCcceEEEEecC----eEE-EE
Q 046083 493 SMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQ---ASKEFLAELKVLTHV-----HHLNLVRLIGYCVEG----SLF-LV 559 (790)
Q Consensus 493 ~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~---~~~~~~~E~~~l~~l-----~h~niv~l~g~~~~~----~~~-lv 559 (790)
.-.+.||+|+||.||. .-.....+||++... ..+++.+|+++++++ .||||++++|++..+ ..+ +|
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 4467999999999996 222333468887653 456799999999999 579999999998754 333 78
Q ss_pred EEE--ecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHH-HHHHhCCCCceeecCCCCCCEEecC----CCcEEEEEeCC
Q 046083 560 YEY--IENGNLNQHLRGSGKDTLTWSARMQIALDSARGL-EYIHEHTVPVYIHRDIKPANILIDK----NFRAKVADFGL 632 (790)
Q Consensus 560 ~e~--~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L-~~LH~~~~~~~vH~dlkp~NILl~~----~~~~kl~DfGl 632 (790)
+|| +.+++|.+++... .+++. ..++.+++.++ +|||++++ +||||||+|||++. ++.++|+||+.
T Consensus 84 ~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~I---vhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRI---VTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred ecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCE---eecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 999 5579999999753 25554 35577888777 99999998 99999999999974 34899999544
Q ss_pred C
Q 046083 633 A 633 (790)
Q Consensus 633 a 633 (790)
+
T Consensus 156 ~ 156 (210)
T PRK10345 156 E 156 (210)
T ss_pred C
Confidence 4
No 426
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=5.5e-16 Score=181.87 Aligned_cols=196 Identities=20% Similarity=0.265 Sum_probs=155.8
Q ss_pred HHHHHhcCcccceeeeecCceEEEEEEEC-CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcc----eEE-EEecCeEE
Q 046083 484 ELAKATNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVR----LIG-YCVEGSLF 557 (790)
Q Consensus 484 ~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~----l~g-~~~~~~~~ 557 (790)
+.....+.|.+.+.||+|+||+||+|... |+.+|+|.-++...-+|.-=.+++.+|+ +-+.. +.. +...+..+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk-~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLK-PQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhc-hhhhcchHHHHHHHccCCcce
Confidence 33445567999999999999999999875 8899999988765555443345555665 32222 221 12244568
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEec-------CCCcEEEEEe
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILID-------KNFRAKVADF 630 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~-------~~~~~kl~Df 630 (790)
||+||.+-|+|.+++... ..++|...+.++.++++.+++||..+| ||+||||+|+||. ++..++|+||
T Consensus 771 lv~ey~~~Gtlld~~N~~--~~m~e~lv~~~~~qml~ive~lH~~~I---IHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLINTN--KVMDEYLVMFFSCQMLRIVEHLHAMGI---IHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred eeeeccccccHHHhhccC--CCCCchhhhHHHHHHHHHHHHHHhcce---ecccCCcceeEeecccCCCCcccceEEEec
Confidence 999999999999999843 468999999999999999999999998 9999999999993 2346899999
Q ss_pred CCCcccccCCc-ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCc
Q 046083 631 GLAKLTEVGSA-SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAME 685 (790)
Q Consensus 631 Gla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~ 685 (790)
|.+..+..-.. ......++|-.+-.+|+..+..++...|-|.|.-+++-||.|+.
T Consensus 846 G~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 846 GRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99986643322 23455778999999999999999999999999999999998853
No 427
>smart00090 RIO RIO-like kinase.
Probab=99.65 E-value=7.3e-16 Score=158.59 Aligned_cols=146 Identities=16% Similarity=0.158 Sum_probs=113.3
Q ss_pred HHHHHHHhcCcccceeeeecCceEEEEEE-E--CCceEEEEEeChhh---------------------------HHHHHH
Q 046083 482 YEELAKATNDFSMGNKIGQGGFGAVFYAE-L--RGEKAAIKKMDMQA---------------------------SKEFLA 531 (790)
Q Consensus 482 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~a~-~--~g~~vavK~~~~~~---------------------------~~~~~~ 531 (790)
...+.+...-|.+.+.||+|+||.||+|. . .|..||+|.++... ...+..
T Consensus 20 ~~~~~~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (237)
T smart00090 20 LYSLLNRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEK 99 (237)
T ss_pred HHHHHhcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHH
Confidence 34444445568899999999999999998 3 38999999876321 122568
Q ss_pred HHHHHHhcCCCC--CcceEEEEecCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-CCcee
Q 046083 532 ELKVLTHVHHLN--LVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT-VPVYI 608 (790)
Q Consensus 532 E~~~l~~l~h~n--iv~l~g~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~-~~~~v 608 (790)
|++.+.++.+.. +.+.+++ ...++||||+++++|...+... ..+.......++.+++.++.+||+++ + +
T Consensus 100 E~~~L~~L~~~~i~~p~~~~~---~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~i---i 171 (237)
T smart00090 100 EFRNLQRLYEAGVPVPKPIAW---RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGEL---V 171 (237)
T ss_pred HHHHHHHHHhcCCCCCeeeEe---cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCE---E
Confidence 999999997533 3344443 3458999999998887765332 23556667889999999999999999 8 9
Q ss_pred ecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 609 HRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 609 H~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
||||||+||+++ ++.++|+|||.+...
T Consensus 172 H~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 172 HGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred eCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 999999999999 889999999998754
No 428
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.64 E-value=1.9e-15 Score=153.45 Aligned_cols=130 Identities=22% Similarity=0.379 Sum_probs=110.7
Q ss_pred eeeeecCceEEEEEEECCceEEEEEeChh-----------hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEEe
Q 046083 496 NKIGQGGFGAVFYAELRGEKAAIKKMDMQ-----------ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYI 563 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~g~~vavK~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~~ 563 (790)
+.||+|++|.||+|.+.+..+++|..... ....+.+|++++..++|+++.....++. ....+++|||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 57999999999999999999999976421 1235778999999999999877766654 45679999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
+|++|.+++.... + .+..++.+++.+|.+||+.++ +|+|++|.|||++ ++.++|+|||++..
T Consensus 82 ~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i---~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGI---IHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCc---ccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 9999999986432 2 788999999999999999998 9999999999999 78899999999874
No 429
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.63 E-value=1.5e-15 Score=157.05 Aligned_cols=181 Identities=25% Similarity=0.303 Sum_probs=128.9
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEe--cCCC--cEEEEEeC
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILI--DKNF--RAKVADFG 631 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl--~~~~--~~kl~DfG 631 (790)
+|+||.-.+. +|.+++... ..+.....-++.|+++|+.|||.+++ .|||+|++|||+ |+|. ...|+|||
T Consensus 318 lylvMkrY~~-tLr~yl~~~---~~s~r~~~~~laQlLEav~hL~~hgv---AhRDlKSDNiL~ElddD~~P~LVvaDFG 390 (598)
T KOG4158|consen 318 LYLVMKRYRQ-TLREYLWTR---HRSYRTGRVILAQLLEAVTHLHKHGV---AHRDLKSDNILLELDDDEIPQLVVADFG 390 (598)
T ss_pred EEEehhcchh-hHHHHHhcC---CCchHHHHHHHHHHHHHHHHHHHccc---hhhcccccceEEEecCCCCcEEEEcccc
Confidence 6889988866 899999854 35556667788999999999999998 999999999999 3333 57899999
Q ss_pred CCcccccCCc-----ccccccccCCCccchhcccCCC------CCchhhHHHHHHHHHHHHhCCccccccccccccccch
Q 046083 632 LAKLTEVGSA-----SVHTRLVGTFGYMPPEYAQYGE------VSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGL 700 (790)
Q Consensus 632 la~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~------~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~ 700 (790)
++-..+...- .......|...-||||+..... --.|+|.|+.|-+.||+++...||...++..-+..
T Consensus 391 CcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r-- 468 (598)
T KOG4158|consen 391 CCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTR-- 468 (598)
T ss_pred eeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechh--
Confidence 8864433211 1112345777899999885432 23589999999999999999999976443211111
Q ss_pred HHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHh
Q 046083 701 VALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMT 764 (790)
Q Consensus 701 ~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~ 764 (790)
..++---|.+ |..++..+.+++...|+.||++||+..-....|.-
T Consensus 469 ---------------~Yqe~qLPal----p~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~L 513 (598)
T KOG4158|consen 469 ---------------TYQESQLPAL----PSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNL 513 (598)
T ss_pred ---------------hhhhhhCCCC----cccCChHHHHHHHHHhcCCccccCCccHHHhHHHH
Confidence 1122222333 34455678889999999999999997665555544
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.63 E-value=3.1e-15 Score=150.33 Aligned_cols=141 Identities=22% Similarity=0.217 Sum_probs=111.3
Q ss_pred HHHHHHhcCcccceeeeecCceEEEEEEEC-CceEEEEEeChhh-------------------------HHHHHHHHHHH
Q 046083 483 EELAKATNDFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQA-------------------------SKEFLAELKVL 536 (790)
Q Consensus 483 ~~l~~~~~~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~~-------------------------~~~~~~E~~~l 536 (790)
+++......|.+.+.||+|+||.||++... |+.+|||++.... ...+..|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 455555555888899999999999999885 8899999764311 11356788899
Q ss_pred HhcCCCC--CcceEEEEecCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCC
Q 046083 537 THVHHLN--LVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKP 614 (790)
Q Consensus 537 ~~l~h~n--iv~l~g~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp 614 (790)
..+.|++ +...++ .+..+++|||+++++|...... .....++.+++.++.++|+.++ +|+||+|
T Consensus 88 ~~l~~~~i~v~~~~~---~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi---~H~Dl~p 153 (198)
T cd05144 88 KALYEEGFPVPKPID---WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGI---IHGDLSE 153 (198)
T ss_pred HHHHHcCCCCCceee---cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCC---CcCCCCc
Confidence 9998774 444443 2346899999999999775431 2345788899999999999998 9999999
Q ss_pred CCEEecCCCcEEEEEeCCCcccc
Q 046083 615 ANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 615 ~NILl~~~~~~kl~DfGla~~~~ 637 (790)
+||++++++.++|+|||++....
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999997554
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.62 E-value=2.7e-15 Score=173.64 Aligned_cols=134 Identities=22% Similarity=0.320 Sum_probs=111.0
Q ss_pred hcCcccceeeeecCceEEEEEEECCceEEEEEeCh-----------hhHHHHHHHHHHHHhcCCCCCcceEEEEec-CeE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----------QASKEFLAELKVLTHVHHLNLVRLIGYCVE-GSL 556 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~-----------~~~~~~~~E~~~l~~l~h~niv~l~g~~~~-~~~ 556 (790)
...|...+.||+|+||.||+|.+.+..+++|+... ...+.+.+|++++..++|++++....++.+ ...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 44556789999999999999998876666654311 112458899999999999999887776654 457
Q ss_pred EEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 557 FLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 557 ~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
++||||+++++|.+++. ....++.+++++|.+||+.++ +||||||+|||+ .++.++|+|||+++..
T Consensus 412 ~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~gi---iHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGI---VHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred EEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCC---ccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 89999999999999886 346789999999999999998 999999999999 6779999999999753
No 432
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.61 E-value=3.9e-15 Score=149.73 Aligned_cols=126 Identities=22% Similarity=0.370 Sum_probs=104.1
Q ss_pred eeeecCceEEEEEEECCceEEEEEeChh-----------hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEEec
Q 046083 497 KIGQGGFGAVFYAELRGEKAAIKKMDMQ-----------ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIE 564 (790)
Q Consensus 497 ~lG~G~fg~Vy~a~~~g~~vavK~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~~~ 564 (790)
.||+|+||.||+|.+.+..+++|..... ..+++.+|++++..++|+++.....++. +...+++|||++
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 4899999999999988999999985421 1245778999999999887554444433 445789999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
+++|.+++..... .++.+++.+|.+||+.++ +|+|++|.||+++ ++.+++.|||++..
T Consensus 81 g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~gi---~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEGND---------ELLREIGRLVGKLHKAGI---VHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhcHH---------HHHHHHHHHHHHHHHCCe---ecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999998764321 788999999999999998 9999999999999 78999999999875
No 433
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.58 E-value=2e-15 Score=173.43 Aligned_cols=206 Identities=26% Similarity=0.421 Sum_probs=142.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecCCC
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGN 567 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~g~ 567 (790)
++|...+.|-.|.+|.||..+++ .+++|.| ++.+.. +.+ .++.....|.+| |+
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l--ilR--nilt~a~npfvv--------------------gD 137 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL--ILR--NILTFAGNPFVV--------------------GD 137 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccch--hhh--ccccccCCccee--------------------ch
Confidence 57888999999999999999877 6778884 332211 000 022222333333 34
Q ss_pred hhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc-----
Q 046083 568 LNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS----- 642 (790)
Q Consensus 568 L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~----- 642 (790)
-...+...+..+. +++.+++|||+.++ +|||+||+|.|+..-|++|+.|||+.+..-.....
T Consensus 138 c~tllk~~g~lPv----------dmvla~Eylh~ygi---vhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg 204 (1205)
T KOG0606|consen 138 CATLLKNIGPLPV----------DMVLAVEYLHSYGI---VHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEG 204 (1205)
T ss_pred hhhhcccCCCCcc----------hhhHHhHhhccCCe---ecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhc
Confidence 4444444333222 22679999999998 99999999999999999999999998743211110
Q ss_pred ---------cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCC
Q 046083 643 ---------VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDP 713 (790)
Q Consensus 643 ---------~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 713 (790)
....++||+.|+|||++....|....|+|++|+++||.+-|..||...... +++..++...
T Consensus 205 ~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe--------elfg~visd~-- 274 (1205)
T KOG0606|consen 205 HIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE--------ELFGQVISDD-- 274 (1205)
T ss_pred chHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH--------HHHhhhhhhh--
Confidence 112368999999999999999999999999999999999999999765432 2233333211
Q ss_pred hhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCC
Q 046083 714 REDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRP 753 (790)
Q Consensus 714 ~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RP 753 (790)
..+.+ .....+.+.++++.+.|+.+|..|-
T Consensus 275 ----i~wpE------~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 275 ----IEWPE------EDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred ----ccccc------cCcCCCHHHHHHHHHHHHhChHhhc
Confidence 01111 1123345688999999999999994
No 434
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.58 E-value=6e-16 Score=166.96 Aligned_cols=121 Identities=35% Similarity=0.566 Sum_probs=106.9
Q ss_pred EEEEEEEecCCChhhhhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 556 LFLVYEYIENGNLNQHLRGS-GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~-~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
+|+.|++++..+|.+||.+. .....+|...+.++.|++.|+.| ++. +|+|+||.||+...+..+||.|||+..
T Consensus 331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~---ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 331 LYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGL---IHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred hhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccc---hhhhccccccccccchhhhhhhhhhee
Confidence 68999999999999999753 34568899999999999999999 666 999999999999999999999999998
Q ss_pred ccccCC-----cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHh
Q 046083 635 LTEVGS-----ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELIS 682 (790)
Q Consensus 635 ~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~ellt 682 (790)
...... ...++...||..||+||.+.+..|+.|+||||||++|+||+.
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 765444 224456789999999999999999999999999999999995
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.51 E-value=1.6e-13 Score=130.52 Aligned_cols=133 Identities=21% Similarity=0.272 Sum_probs=112.6
Q ss_pred cceeeeecCceEEEEEEECCceEEEEEeChhh-HHHHHHHHHHHHhcCC--CCCcceEEEEec-CeEEEEEEEecCCChh
Q 046083 494 MGNKIGQGGFGAVFYAELRGEKAAIKKMDMQA-SKEFLAELKVLTHVHH--LNLVRLIGYCVE-GSLFLVYEYIENGNLN 569 (790)
Q Consensus 494 ~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~-~~~~~~E~~~l~~l~h--~niv~l~g~~~~-~~~~lv~e~~~~g~L~ 569 (790)
+.+.||+|.++.||++...+..+++|...... ...+..|+.++..++| .++.+++++... +..+++|||++++.+.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~ 81 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLD 81 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecc
Confidence 45789999999999999988899999987543 3578899999999976 588888887764 4589999999987776
Q ss_pred hhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 570 QHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 570 ~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
.+ +......++.++++++++||......++|+|++|+||++++.+.+++.|||.+..
T Consensus 82 ~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 82 EV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred cC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 54 5566778899999999999997644569999999999999989999999999874
No 436
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.48 E-value=4.5e-13 Score=138.20 Aligned_cols=131 Identities=22% Similarity=0.306 Sum_probs=104.7
Q ss_pred ceeee-ecCceEEEEEEECCceEEEEEeChh----------------hHHHHHHHHHHHHhcCCCCC--cceEEEEec--
Q 046083 495 GNKIG-QGGFGAVFYAELRGEKAAIKKMDMQ----------------ASKEFLAELKVLTHVHHLNL--VRLIGYCVE-- 553 (790)
Q Consensus 495 ~~~lG-~G~fg~Vy~a~~~g~~vavK~~~~~----------------~~~~~~~E~~~l~~l~h~ni--v~l~g~~~~-- 553 (790)
...|| .|+.|+||.+...+..++||.+... ....+.+|++++.+++|+++ +..+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 45787 8999999999999999999977421 12357789999999998775 667766432
Q ss_pred C---eEEEEEEEecC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEE
Q 046083 554 G---SLFLVYEYIEN-GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVAD 629 (790)
Q Consensus 554 ~---~~~lv~e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~D 629 (790)
+ ..++|||++++ .+|.+++... .++.. .+.+++.+|.+||+.++ +|+||||.|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~GI---~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDAGV---YHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHCCC---CCCCCCchhEEEcCCCCEEEEE
Confidence 1 13599999997 6999888642 34443 35688999999999998 9999999999999999999999
Q ss_pred eCCCcc
Q 046083 630 FGLAKL 635 (790)
Q Consensus 630 fGla~~ 635 (790)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 999875
No 437
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.46 E-value=4.3e-13 Score=133.37 Aligned_cols=132 Identities=21% Similarity=0.258 Sum_probs=96.5
Q ss_pred ceeeeecCceEEEEEEEC-CceEEEEEeChhh-----HHH----------------------HHHHHHHHHhcCCCC--C
Q 046083 495 GNKIGQGGFGAVFYAELR-GEKAAIKKMDMQA-----SKE----------------------FLAELKVLTHVHHLN--L 544 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~~-----~~~----------------------~~~E~~~l~~l~h~n--i 544 (790)
.+.||+|+||.||+|... ++.+|||.++... ... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 568999999999999987 8899999876321 111 134566666664432 4
Q ss_pred cceEEEEecCeEEEEEEEecCCChhh-hhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCCCceeecCCCCCCEEecCC
Q 046083 545 VRLIGYCVEGSLFLVYEYIENGNLNQ-HLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTVPVYIHRDIKPANILIDKN 622 (790)
Q Consensus 545 v~l~g~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~~~~vH~dlkp~NILl~~~ 622 (790)
.+.+++ ...+++|||++++.+.. .+.... .. .....++.+++.++.++|. .++ +|+||||+||+++ +
T Consensus 82 ~~~~~~---~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~i---vH~Dl~p~Nili~-~ 150 (187)
T cd05119 82 PKPIDL---NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAGL---VHGDLSEYNILVD-D 150 (187)
T ss_pred CceEec---CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccCc---CcCCCChhhEEEE-C
Confidence 444443 24589999999955432 121111 11 5677899999999999999 887 9999999999999 8
Q ss_pred CcEEEEEeCCCcccc
Q 046083 623 FRAKVADFGLAKLTE 637 (790)
Q Consensus 623 ~~~kl~DfGla~~~~ 637 (790)
+.++|+|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 899999999997543
No 438
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=99.42 E-value=5.6e-13 Score=144.93 Aligned_cols=218 Identities=16% Similarity=0.122 Sum_probs=115.5
Q ss_pred hhhcccCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCCCeEEeeeecccCCCCCcccceeEEeccCCchHHHHhhh
Q 046083 16 LASYYVWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSDTRISIPFSCDCLNGDFLGHTFTYETQFGDTYEKVASFA 95 (790)
Q Consensus 16 ~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g~~l~ip~~~~~~~~~~~~~~~~Y~V~~GDTl~~IA~~~ 95 (790)
...|+|++|||||.||++||+++++|+++| ++. ++.|.+||.|.||-..........-....-.|+.|=.. .
T Consensus 27 a~tytVq~GDTLw~IA~~ygvtv~~I~~~N-~l~-~~~I~~Gq~L~Ip~~~~~~~~~~~Vta~~LNVRsgps~------s 98 (481)
T PRK13914 27 ASTVVVEAGDTLWGIAQSKGTTVDAIKKAN-NLT-TDKIVPGQKLQVNEVAAAEKTEKSVSATWLNVRSGAGV------D 98 (481)
T ss_pred CceEEECCCCCHHHHHHHHCCCHHHHHHHh-CCC-cccccCCCEEEeCCCCcccccceeEecceEEEecCCCC------C
Confidence 367999999999999999999999999999 785 57899999999996532110000000111222222110 0
Q ss_pred cCCCChHHHHHHccCCCCCCCCCCcEEEEEeeccCCCCcc---cCCceeEEEeecCCCCCHHHHHHHhCCChHHHhhhCC
Q 046083 96 FANLTTEDWVRRVNIYEPTRIPDYAFINVTVNCSCGDRHI---SRDYGLFTTYPLRPAQNLSSVAAEAGVAPQSLQRYNP 172 (790)
Q Consensus 96 ~~~~~t~~~l~~~N~~~~~~l~~Gq~l~iP~~~~~~~~~~---~~~~~~~~~y~v~~gd~l~~ia~~~~~~~~~l~~~N~ 172 (790)
| -.-..|..|+++.|-...+.+=..+ .+..|+....-+..-.++..+++ .++++. |-
T Consensus 99 ~--------------~IIgsl~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~~~~~~~~~~-----~~~~~~-~~ 158 (481)
T PRK13914 99 N--------------SIITSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDKVTSTPVAP-----TQEVKK-ET 158 (481)
T ss_pred c--------------ceeeeecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccCCCccCcccc-----chhhhh-cc
Confidence 0 0112477888888842111000011 12234433333444444444442 122222 10
Q ss_pred CCcccCCcceEEeechhhHHHHHHHHHHHHhhhhhccccccccchhhhhhheeeecCCCCCHHHHHHHcCCChhhHhhcC
Q 046083 173 GTNFSAGTGLVFVPARVFELKLALLLVLAFFCARRRVEAVAECSKGCDLALASYYLWKGANLTFISKVFDTSIKYILSFN 252 (790)
Q Consensus 173 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~N 252 (790)
-. + .-.|............ .+... .+.... .+..+.-......|+|++|||||.||++||+++++|+++|
T Consensus 159 ~~------~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~-~~~~~~~~~~a~tytVq~GDTL~sIAkrYgVtv~eI~~~N 228 (481)
T PRK13914 159 TT------Q-QAAPAAETKTEVKQTT-QATTP-APKVAE-TKETPVVDQNATTHAVKSGDTIWALSVKYGVSVQDIMSWN 228 (481)
T ss_pred cc------c-cccchhcccchhccCC-cccCC-cccccc-cccCccccCCCeEEEECCCCCHHHHHHHHCCCHHHHHHhc
Confidence 00 0 0001000000000000 00000 000000 0000111123558999999999999999999999999999
Q ss_pred CCCCCcccccCCceEEecccc
Q 046083 253 PQITNKDKILAGTRINVPFSC 273 (790)
Q Consensus 253 ~~~~~~~~l~~gq~l~ip~~~ 273 (790)
++.. ..|++||.|.||...
T Consensus 229 -~l~s-~~L~pGQ~L~Ip~sa 247 (481)
T PRK13914 229 -NLSS-SSIYVGQKLAIKQTA 247 (481)
T ss_pred -CCCc-cccCCCCEEEecCCC
Confidence 7844 579999999999653
No 439
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=3.9e-14 Score=163.53 Aligned_cols=249 Identities=23% Similarity=0.314 Sum_probs=180.8
Q ss_pred CcccceeeeecCceEEEEEEEC---CceEEEEEeChh-----hHHHHHHHHHHHHhcC-CCCCcceEEEEecCe-EEEEE
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR---GEKAAIKKMDMQ-----ASKEFLAELKVLTHVH-HLNLVRLIGYCVEGS-LFLVY 560 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~---g~~vavK~~~~~-----~~~~~~~E~~~l~~l~-h~niv~l~g~~~~~~-~~lv~ 560 (790)
.|.+.+.||+|.|+.|-..... ...+|+|.+... ..+....|..+-..+. |+|++.+++...+.+ .++..
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4566777999999999887664 345666665432 1233444667767776 999999999887654 78999
Q ss_pred EEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-hCCCCceeecCCCCCCEEecCCC-cEEEEEeCCCccccc
Q 046083 561 EYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH-EHTVPVYIHRDIKPANILIDKNF-RAKVADFGLAKLTEV 638 (790)
Q Consensus 561 e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH-~~~~~~~vH~dlkp~NILl~~~~-~~kl~DfGla~~~~~ 638 (790)
+|.+++++.+-+........+....-.++.|+..++.|+| ..++ .|+||||+|.+++..+ ..+++|||+|..+..
T Consensus 101 ~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~---~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGV---THRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred CcccccccccccccCCccCCCCcchhhhhhhhccCccccCccccc---ccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999999883222223555666788999999999999 8888 9999999999999999 999999999987765
Q ss_pred --CCccccccccc-CCCccchhcccCC-CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCCh
Q 046083 639 --GSASVHTRLVG-TFGYMPPEYAQYG-EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPR 714 (790)
Q Consensus 639 --~~~~~~~~~~g-t~~y~aPE~~~~~-~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 714 (790)
+.........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+........... .+.....
T Consensus 178 ~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~-------~~~~~~~-- 248 (601)
T KOG0590|consen 178 KNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYS-------SWKSNKG-- 248 (601)
T ss_pred cCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccce-------eeccccc--
Confidence 22333344677 9999999999874 557789999999999999999999876554321110 1111100
Q ss_pred hhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 715 EDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 715 ~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
...............++...++..+|..|.+.+++..
T Consensus 249 ---------~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 249 ---------RFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ---------ccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 0000011123345678889999999999999988754
No 440
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=99.33 E-value=4.7e-12 Score=137.80 Aligned_cols=107 Identities=19% Similarity=0.207 Sum_probs=85.3
Q ss_pred heeeecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEeccccccC--------------------------
Q 046083 223 LASYYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVPFSCNCI-------------------------- 276 (790)
Q Consensus 223 ~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip~~~~~~-------------------------- 276 (790)
+..|+|++|||||.||++||+++++|+++| ++ +++.|++||.|.||-.....
T Consensus 27 a~tytVq~GDTLw~IA~~ygvtv~~I~~~N-~l-~~~~I~~Gq~L~Ip~~~~~~~~~~~Vta~~LNVRsgps~s~~IIgs 104 (481)
T PRK13914 27 ASTVVVEAGDTLWGIAQSKGTTVDAIKKAN-NL-TTDKIVPGQKLQVNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITS 104 (481)
T ss_pred CceEEECCCCCHHHHHHHHCCCHHHHHHHh-CC-CcccccCCCEEEeCCCCcccccceeEecceEEEecCCCCCcceeee
Confidence 347999999999999999999999999999 88 45789999999999542100
Q ss_pred -------------CCcee--------------------------------------------------------------
Q 046083 277 -------------QNKFL-------------------------------------------------------------- 281 (790)
Q Consensus 277 -------------~~~~~-------------------------------------------------------------- 281 (790)
.+..+
T Consensus 105 l~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (481)
T PRK13914 105 IKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDKVTSTPVAPTQEVKKETTTQQAAPAAETKTEVKQTTQATTPAP 184 (481)
T ss_pred ecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccCCCccCccccchhhhhccccccccchhcccchhccCCcccCCcc
Confidence 00000
Q ss_pred ------------eeeEEEEeccCchHHHHHHHhhcccccHHHHHhcCCCCCCCCCCCCcEEEEeEe
Q 046083 282 ------------GHSFSYKVKSGNTYKRIAELIYANLTTLDWLKSSNAYDENHTPDVSSSVNVIVN 335 (790)
Q Consensus 282 ------------~~~~~y~V~~gDtl~~IA~~~~~~l~~~~~l~~~N~~~~~~~~~~Gq~l~ip~~ 335 (790)
.....|+|++|||||.|| +.|. +++++|++||++..+.+.+ ||+|.||..
T Consensus 185 ~~~~~~~~~~~~~~a~tytVq~GDTL~sIA-krYg--Vtv~eI~~~N~l~s~~L~p-GQ~L~Ip~s 246 (481)
T PRK13914 185 KVAETKETPVVDQNATTHAVKSGDTIWALS-VKYG--VSVQDIMSWNNLSSSSIYV-GQKLAIKQT 246 (481)
T ss_pred cccccccCccccCCCeEEEECCCCCHHHHH-HHHC--CCHHHHHHhcCCCccccCC-CCEEEecCC
Confidence 001359999999999999 5565 7889999999998877777 999999964
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.28 E-value=1.8e-11 Score=119.53 Aligned_cols=129 Identities=18% Similarity=0.155 Sum_probs=99.4
Q ss_pred ceeeeecCceEEEEEEECCceEEEEEeChhh--HHHHHHHHHHHHhcCCCCCcc-eEEEEecCeEEEEEEEecCCChhhh
Q 046083 495 GNKIGQGGFGAVFYAELRGEKAAIKKMDMQA--SKEFLAELKVLTHVHHLNLVR-LIGYCVEGSLFLVYEYIENGNLNQH 571 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~--~~~~~~E~~~l~~l~h~niv~-l~g~~~~~~~~lv~e~~~~g~L~~~ 571 (790)
.+.|+.|.++.||++...+..+++|...... ...+..|++++..+.+.++++ ++.+ .....++||||+++.++.+.
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~-~~~~~~lv~e~i~G~~l~~~ 81 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYF-DPETGVLITEFIEGSELLTE 81 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEE-eCCCCeEEEEecCCCccccc
Confidence 4678899999999999999999999976543 345778999999987666554 4444 33345899999999887643
Q ss_pred hhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCC--CceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 572 LRGSGKDTLTWSARMQIALDSARGLEYIHEHTV--PVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 572 l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~--~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
. . ....+..+++++|+.||..+. ..++|+|++|.||+++ ++.++++||+.+..
T Consensus 82 ~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 82 D-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred c-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 0 1 112356789999999999873 2369999999999999 66899999999763
No 442
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.27 E-value=2.8e-11 Score=135.68 Aligned_cols=136 Identities=21% Similarity=0.219 Sum_probs=96.9
Q ss_pred ceeeeecCceEEEEEEEC-CceEEEEEeChhhHHH-------------------------------------------HH
Q 046083 495 GNKIGQGGFGAVFYAELR-GEKAAIKKMDMQASKE-------------------------------------------FL 530 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~~~~~-------------------------------------------~~ 530 (790)
.+.||.|++|.||+|++. |+.||||+.++...+. |.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 468999999999999986 8999999986532222 33
Q ss_pred HHHHHHHhc----CCCCCcceEEEEe--cCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHH-HHHHHHhCC
Q 046083 531 AELKVLTHV----HHLNLVRLIGYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR-GLEYIHEHT 603 (790)
Q Consensus 531 ~E~~~l~~l----~h~niv~l~g~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~-~L~~LH~~~ 603 (790)
+|.+.+.++ +|.+-+.+-.++. .+..+|||||++|++|.++...... ..+ +.+++..++. .+..+|..+
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHHhCC
Confidence 344444444 2222233222222 3347999999999999987753211 122 3456666665 478899999
Q ss_pred CCceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 604 VPVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 604 ~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
+ +|+|++|.||+++.+++++++|||++..+.
T Consensus 278 ~---~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 278 F---FHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred c---eeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8 999999999999999999999999997654
No 443
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=4.9e-12 Score=128.58 Aligned_cols=203 Identities=20% Similarity=0.308 Sum_probs=139.1
Q ss_pred HHHHHhcCCCCCcceEEEEec------CeEEEEEEEecCCChhhhhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCC
Q 046083 533 LKVLTHVHHLNLVRLIGYCVE------GSLFLVYEYIENGNLNQHLRGSG--KDTLTWSARMQIALDSARGLEYIHEHTV 604 (790)
Q Consensus 533 ~~~l~~l~h~niv~l~g~~~~------~~~~lv~e~~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~ia~~L~~LH~~~~ 604 (790)
+.-|-++-|.|||+++.|+.+ .+..++.|||..|+|..+|++.. ...+......+++-||..||.|||+..
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~- 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCD- 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccC-
Confidence 344555679999999988763 23688999999999999998643 345777888899999999999999987
Q ss_pred CceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCc----ccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHH
Q 046083 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSA----SVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYEL 680 (790)
Q Consensus 605 ~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~el 680 (790)
|+++|+++..+-|++..++-+|+.--. ......... .......+-++|.+||+-.....+..+|||+||+..+||
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~a-p~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVA-PDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CccccCCcchhheeecCCceEEecccC-ccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 889999999999999999888875321 111111100 011123467899999998888888999999999999999
Q ss_pred HhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 681 ISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 681 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
--+.--...... ... ..+.+...+-. +... .=+.++..|++..|..||+|++++.
T Consensus 276 ailEiq~tnseS-----~~~------------~ee~ia~~i~~-len~-------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 276 AILEIQSTNSES-----KVE------------VEENIANVIIG-LENG-------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HHheeccCCCcc-----eee------------hhhhhhhheee-ccCc-------cccCcCcccccCCCCCCcchhhhhc
Confidence 755322111100 000 00111111100 0000 1135788999999999999999865
Q ss_pred HH
Q 046083 761 AL 762 (790)
Q Consensus 761 ~L 762 (790)
+.
T Consensus 331 Hp 332 (458)
T KOG1266|consen 331 HP 332 (458)
T ss_pred Cc
Confidence 43
No 444
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.09 E-value=8.8e-11 Score=129.84 Aligned_cols=242 Identities=23% Similarity=0.298 Sum_probs=171.5
Q ss_pred Ccccceeeee--cCceEEEEEEE--C--CceEEEEEeCh-----hhHHHHHHHHHHHHhc-CCCCCcceEEEEecCe-EE
Q 046083 491 DFSMGNKIGQ--GGFGAVFYAEL--R--GEKAAIKKMDM-----QASKEFLAELKVLTHV-HHLNLVRLIGYCVEGS-LF 557 (790)
Q Consensus 491 ~f~~~~~lG~--G~fg~Vy~a~~--~--g~~vavK~~~~-----~~~~~~~~E~~~l~~l-~h~niv~l~g~~~~~~-~~ 557 (790)
.|.+.+.+|. |.+|.||.+.. . +..+|+|+-+. .....-.+|+...+.+ .|+|.++.+..+.++. .+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4667889999 99999999877 3 77888887431 2223344566666666 4999999777776655 56
Q ss_pred EEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHH----HHHHHHhCCCCceeecCCCCCCEEecCC-CcEEEEEeCC
Q 046083 558 LVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSAR----GLEYIHEHTVPVYIHRDIKPANILIDKN-FRAKVADFGL 632 (790)
Q Consensus 558 lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~----~L~~LH~~~~~~~vH~dlkp~NILl~~~-~~~kl~DfGl 632 (790)
+=.|++ +.+|..+.+... ..++....+.+..+... ||.++|+..+ +|-|+||.||+...+ ...+++|||+
T Consensus 195 iqtE~~-~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~---~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNI---VHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeeccc-cchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcc---cccccchhheecccccceeecCCcce
Confidence 666666 568888887643 23566666777777777 9999999998 999999999999999 7889999999
Q ss_pred CcccccCCcc----cccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHH
Q 046083 633 AKLTEVGSAS----VHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVL 708 (790)
Q Consensus 633 a~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 708 (790)
...+...... ...+..|...|++||... +.++..+|+|++|.+++|..+|...........+.
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~------------ 336 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS------------ 336 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcc------------
Confidence 9877544321 112346788999999887 57888999999999999999887665432111000
Q ss_pred cCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHH
Q 046083 709 RQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 709 ~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~ 760 (790)
.++.+. ++.++-.....++...+.+|++.+|..|++.+++..
T Consensus 337 -------~~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 337 -------QLRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -------cccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 000111 111222222344556899999999999998877643
No 445
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.00 E-value=1.8e-08 Score=114.43 Aligned_cols=139 Identities=16% Similarity=0.274 Sum_probs=90.0
Q ss_pred cCcccceeeeecCceEEEEEEEC--CceEEEEEeChhhHH----------------------------------------
Q 046083 490 NDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDMQASK---------------------------------------- 527 (790)
Q Consensus 490 ~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~~~~~---------------------------------------- 527 (790)
..|+. +.||+|++|.||+|+++ |+.||||+.++...+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35665 78999999999999985 799999998643111
Q ss_pred ---HHHHHHHHHHhcC----CCCCcceEEEEe--cCeEEEEEEEecCCChhhh--hhcCCCCCCCHHHHHHHHHHHHHHH
Q 046083 528 ---EFLAELKVLTHVH----HLNLVRLIGYCV--EGSLFLVYEYIENGNLNQH--LRGSGKDTLTWSARMQIALDSARGL 596 (790)
Q Consensus 528 ---~~~~E~~~l~~l~----h~niv~l~g~~~--~~~~~lv~e~~~~g~L~~~--l~~~~~~~l~~~~~~~i~~~ia~~L 596 (790)
+|.+|...+.+++ +.+.+.+-.++. ....+|||||++|++|.++ +...+ .+....... .+..-+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g---~d~~~la~~--~v~~~~ 273 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG---TDMKLLAER--GVEVFF 273 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC---CCHHHHHHH--HHHHHH
Confidence 1333444444442 333333333333 2456899999999999874 33222 222211111 111113
Q ss_pred HHHHhCCCCceeecCCCCCCEEecCCC----cEEEEEeCCCcccc
Q 046083 597 EYIHEHTVPVYIHRDIKPANILIDKNF----RAKVADFGLAKLTE 637 (790)
Q Consensus 597 ~~LH~~~~~~~vH~dlkp~NILl~~~~----~~kl~DfGla~~~~ 637 (790)
.-++..|+ +|+|++|.||+++.++ ++++.|||+...++
T Consensus 274 ~Qif~~Gf---fHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 274 TQVFRDGF---FHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHhCCe---eeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 33456776 9999999999999988 99999999987553
No 446
>PF01476 LysM: LysM domain; InterPro: IPR018392 This domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation []. This domain may have a general peptidoglycan binding function.; GO: 0016998 cell wall macromolecule catabolic process; PDB: 2DJP_A 3ZQD_A 1Y7M_B 4A52_A 2L9Y_A 1E0G_A.
Probab=99.00 E-value=2.1e-10 Score=84.80 Aligned_cols=44 Identities=27% Similarity=0.536 Sum_probs=37.8
Q ss_pred cccCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCCCeEEee
Q 046083 19 YYVWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSDTRISIP 63 (790)
Q Consensus 19 y~v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g~~l~ip 63 (790)
|+|++|||++.||++||++.++|+++||++.... |.+||.|.||
T Consensus 1 y~V~~gDtl~~IA~~~~~~~~~l~~~N~~~~~~~-l~~G~~l~iP 44 (44)
T PF01476_consen 1 YTVQPGDTLWSIAKRYGISVDELMELNPNIDSDN-LQPGQKLCIP 44 (44)
T ss_dssp EEE-TT--HHHHHHHTTS-HHHHHHHCCTTHGGC-GGTTEEEEEC
T ss_pred CEECcCCcHHHHHhhhhhhHhHHHHhcCCCCccc-CCCCCEEEeC
Confidence 8999999999999999999999999999997655 9999999998
No 447
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=98.98 E-value=8.8e-09 Score=101.84 Aligned_cols=133 Identities=16% Similarity=0.169 Sum_probs=96.9
Q ss_pred ceeeeecCceEEEEEEEC--------CceEEEEEeChh-------------------------hHHHH----HHHHHHHH
Q 046083 495 GNKIGQGGFGAVFYAELR--------GEKAAIKKMDMQ-------------------------ASKEF----LAELKVLT 537 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~--------g~~vavK~~~~~-------------------------~~~~~----~~E~~~l~ 537 (790)
...||.|.-+.||.|... +..+|||..+.. ..+.+ .+|.+.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 357899999999999754 368999976310 01122 37999999
Q ss_pred hcCC--CCCcceEEEEecCeEEEEEEEecCCChhh-hhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HhCCCCceeecCCC
Q 046083 538 HVHH--LNLVRLIGYCVEGSLFLVYEYIENGNLNQ-HLRGSGKDTLTWSARMQIALDSARGLEYI-HEHTVPVYIHRDIK 613 (790)
Q Consensus 538 ~l~h--~niv~l~g~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~l~~~~~~~i~~~ia~~L~~L-H~~~~~~~vH~dlk 613 (790)
++.. -++...+++ .+.+|||||+.+..+.. .+.. ..++......+..+++.+|..| |..++ ||+||+
T Consensus 82 rl~~~Gv~vP~pi~~---~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~gl---VHGDLs 152 (197)
T cd05146 82 RMQKAGIPCPEVVVL---KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECNL---VHADLS 152 (197)
T ss_pred HHHHcCCCCCeEEEe---cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCCe---ecCCCC
Confidence 9853 466666655 35689999998754432 2222 1244456677889999999999 88888 999999
Q ss_pred CCCEEecCCCcEEEEEeCCCcccc
Q 046083 614 PANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 614 p~NILl~~~~~~kl~DfGla~~~~ 637 (790)
+.|||+++ +.+.|+|||.+....
T Consensus 153 ~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEEC-CcEEEEECCCceeCC
Confidence 99999974 679999999887554
No 448
>PF01476 LysM: LysM domain; InterPro: IPR018392 This domain is about 40 residues long and is found in a variety of enzymes involved in bacterial cell wall degradation []. This domain may have a general peptidoglycan binding function.; GO: 0016998 cell wall macromolecule catabolic process; PDB: 2DJP_A 3ZQD_A 1Y7M_B 4A52_A 2L9Y_A 1E0G_A.
Probab=98.98 E-value=4.3e-10 Score=83.11 Aligned_cols=44 Identities=25% Similarity=0.542 Sum_probs=37.0
Q ss_pred eecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEec
Q 046083 226 YYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVP 270 (790)
Q Consensus 226 y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip 270 (790)
|+|++|||++.||++||++.++|+++|+++... .|.+||.|.||
T Consensus 1 y~V~~gDtl~~IA~~~~~~~~~l~~~N~~~~~~-~l~~G~~l~iP 44 (44)
T PF01476_consen 1 YTVQPGDTLWSIAKRYGISVDELMELNPNIDSD-NLQPGQKLCIP 44 (44)
T ss_dssp EEE-TT--HHHHHHHTTS-HHHHHHHCCTTHGG-CGGTTEEEEEC
T ss_pred CEECcCCcHHHHHhhhhhhHhHHHHhcCCCCcc-cCCCCCEEEeC
Confidence 899999999999999999999999999888544 49999999998
No 449
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.96 E-value=1.1e-08 Score=114.26 Aligned_cols=159 Identities=18% Similarity=0.232 Sum_probs=115.8
Q ss_pred CceEEEEEeChhh---HHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHH
Q 046083 513 GEKAAIKKMDMQA---SKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQI 588 (790)
Q Consensus 513 g~~vavK~~~~~~---~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i 588 (790)
+.++.|...+... .+...+-++.|+.++||||++++.... ++..|+|.|-+ ..|..++...+ .......
T Consensus 37 ~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~-----~~~v~~G 109 (690)
T KOG1243|consen 37 GGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG-----KEEVCLG 109 (690)
T ss_pred CCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH-----HHHHHHH
Confidence 6677776665432 344677788999999999999998766 56799999987 35777776533 4445557
Q ss_pred HHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccccccCCCccchhcccCCCCCchh
Q 046083 589 ALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSPKI 668 (790)
Q Consensus 589 ~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~~s 668 (790)
+.||+.||.|||+.+. ++|++|.-..|++++.|+.||++|.+......... ......---.|..|+.+.... -..
T Consensus 110 l~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~--~s~ 184 (690)
T KOG1243|consen 110 LFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE--WSI 184 (690)
T ss_pred HHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc--cch
Confidence 7899999999986654 59999999999999999999999998764432221 001111122466666554322 346
Q ss_pred hHHHHHHHHHHHHhC
Q 046083 669 DVYAFGVVLYELISA 683 (790)
Q Consensus 669 DvwS~Gvvl~elltG 683 (790)
|.|.||++++|++.|
T Consensus 185 D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 185 DSWGLGCLIEELFNG 199 (690)
T ss_pred hhhhHHHHHHHHhCc
Confidence 999999999999998
No 450
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.95 E-value=9.4e-09 Score=104.86 Aligned_cols=137 Identities=20% Similarity=0.313 Sum_probs=108.7
Q ss_pred eeeeecCceEEEEEEECC-ceEEEEEeChh----hHHHHHHHHHHHHhcCC--CCCcceEEEEecC----eEEEEEEEec
Q 046083 496 NKIGQGGFGAVFYAELRG-EKAAIKKMDMQ----ASKEFLAELKVLTHVHH--LNLVRLIGYCVEG----SLFLVYEYIE 564 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~g-~~vavK~~~~~----~~~~~~~E~~~l~~l~h--~niv~l~g~~~~~----~~~lv~e~~~ 564 (790)
+.|+.|.++.||++...+ +.+++|..... ....+..|.+++..+++ .++.+++.+..+. ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 578999999999998875 89999987643 24578899999999976 4467778777642 4689999999
Q ss_pred CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----------------------------------------
Q 046083 565 NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHT----------------------------------------- 603 (790)
Q Consensus 565 ~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~----------------------------------------- 603 (790)
+.+|.+.+.. ..++...+..++.+++++|..||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9988876542 24677778888888889998888531
Q ss_pred ------------CCceeecCCCCCCEEecC--CCcEEEEEeCCCcc
Q 046083 604 ------------VPVYIHRDIKPANILIDK--NFRAKVADFGLAKL 635 (790)
Q Consensus 604 ------------~~~~vH~dlkp~NILl~~--~~~~kl~DfGla~~ 635 (790)
...++|+|+.+.||++++ ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 134799999999999998 56789999998864
No 451
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.94 E-value=1.3e-08 Score=96.48 Aligned_cols=139 Identities=20% Similarity=0.242 Sum_probs=104.3
Q ss_pred cceeeeecCceEEEEEEECCceEEEEEeCh-----------hhHHHHHHHHHHHHhcCCCCCcce-EEEEecCeEEEEEE
Q 046083 494 MGNKIGQGGFGAVFYAELRGEKAAIKKMDM-----------QASKEFLAELKVLTHVHHLNLVRL-IGYCVEGSLFLVYE 561 (790)
Q Consensus 494 ~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~-----------~~~~~~~~E~~~l~~l~h~niv~l-~g~~~~~~~~lv~e 561 (790)
....|-+|.-+.|+++.+.|+.+.||.--. -......+|.+.|.+++--.|.-. +-++....-.++||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 467899999999999999999999985321 123457889999998865444333 22333344578999
Q ss_pred EecC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC---cEEEEEeCCCcc
Q 046083 562 YIEN-GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF---RAKVADFGLAKL 635 (790)
Q Consensus 562 ~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~---~~kl~DfGla~~ 635 (790)
|+++ .++.+++................+..+-+.+.-||.+++ +|+||..+||+|..++ .+.++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndi---iHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDI---IHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCe---ecccccccceEEecCCCcCceEEEeecchhc
Confidence 9987 578888876544333334446788888899999999998 9999999999996554 468999999864
No 452
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.91 E-value=1.6e-08 Score=96.53 Aligned_cols=127 Identities=23% Similarity=0.354 Sum_probs=96.8
Q ss_pred eeeeecCceEEEEEEECCceEEEEEeChh-----------hHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEEEEEe
Q 046083 496 NKIGQGGFGAVFYAELRGEKAAIKKMDMQ-----------ASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLVYEYI 563 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~g~~vavK~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv~e~~ 563 (790)
..+++|+-+.+|.+.+.|..+++|.--++ ..+...+|.+++.+++--.|...+=|.. .....++|||+
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 35789999999999888888777753211 1244678999999986554433333333 34468999999
Q ss_pred cCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 564 ENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 564 ~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
+|-.|.+++... ...++..+-+-+.-||..++ +|+||.++||++..+. +.++||||+..
T Consensus 82 ~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~gi---vHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA---------RPDLLREVGRLVGKLHKAGI---VHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCe---ecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999988754 24566777777888999998 9999999999998765 99999999874
No 453
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.90 E-value=5.7e-08 Score=102.59 Aligned_cols=270 Identities=15% Similarity=0.191 Sum_probs=161.3
Q ss_pred ccceeeeecCceEEEEEEECCceEEEEEeChhhHHHHHHHHHHHHhc-CCCCCcceEEE--------EecCeEEEEEEEe
Q 046083 493 SMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHV-HHLNLVRLIGY--------CVEGSLFLVYEYI 563 (790)
Q Consensus 493 ~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~~~~~~~E~~~l~~l-~h~niv~l~g~--------~~~~~~~lv~e~~ 563 (790)
...+.||+|+.+.+|-.-.-+..|| |+...-....-...+..|... .||-+-.-+.| -.....-++|..+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d~VA-KIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~v 92 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRDQVA-KIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPKV 92 (637)
T ss_pred CCCccccCCccceeeecchhhchhh-eeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecccC
Confidence 4578899999999996544344444 444321111111223344443 46544331221 1111256777777
Q ss_pred cCC-Chhhhhhc----CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 564 ENG-NLNQHLRG----SGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 564 ~~g-~L~~~l~~----~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
.+. ...+++.. .......|...++.++.++.+.+.||.+|. +-+|+.++|+|+.+++.+.|.|-..-....
T Consensus 93 ~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh---~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~- 168 (637)
T COG4248 93 SGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGH---VVGDVNQNSFLVSDDSKVVLVDSDSFQINA- 168 (637)
T ss_pred CCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCC---cccccCccceeeecCceEEEEcccceeecc-
Confidence 653 23333321 223568999999999999999999999998 889999999999999999999855433321
Q ss_pred CCcccccccccCCCccchhccc-----CCCCCchhhHHHHHHHHHHHHhC-CccccccccccccccchHHHH-HHHHcCC
Q 046083 639 GSASVHTRLVGTFGYMPPEYAQ-----YGEVSPKIDVYAFGVVLYELISA-MEAVVKTNETITESTGLVALF-EEVLRQP 711 (790)
Q Consensus 639 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~s~~sDvwS~Gvvl~elltG-~~p~~~~~~~~~~~~~~~~~~-~~~~~~~ 711 (790)
........+|.+.|.+||.-. +-.-+...|-|.+||++++|+.| ++||...........-+...+ ...+..
T Consensus 169 -ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~y- 246 (637)
T COG4248 169 -NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAY- 246 (637)
T ss_pred -CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeee-
Confidence 222333467899999999764 33567789999999999999887 899876432211111111000 000000
Q ss_pred CChhhhhhhcCCcCCCCCCH-HHHHHHHHHHHHccccC--CCCCCCHHHHHHHHHhhccCCccC
Q 046083 712 DPREDLQRLVDPRLGDDYPI-DSVRKMARLARACTQEN--PQLRPSMRAIVVALMTLSSSSEDW 772 (790)
Q Consensus 712 ~~~~~l~~~~d~~l~~~~~~-~~~~~l~~li~~Cl~~d--P~~RPt~~evl~~L~~l~~~~~~~ 772 (790)
....-..... -....|- -.+..+..|..+|+... +.-|||.+..+..|..+.++-..+
T Consensus 247 -a~~~~~g~~p--~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C 307 (637)
T COG4248 247 -ASDQRRGLKP--PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKC 307 (637)
T ss_pred -chhccCCCCC--CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 0000000000 0111221 23456677778887654 578999999999988876554433
No 454
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.84 E-value=9.7e-08 Score=99.76 Aligned_cols=137 Identities=14% Similarity=0.132 Sum_probs=101.1
Q ss_pred eeeeecCceEEEEEEECCceEEEEEeChhh----HH----------HHHHHHHHHHhcCCC--CCcceEEEEec------
Q 046083 496 NKIGQGGFGAVFYAELRGEKAAIKKMDMQA----SK----------EFLAELKVLTHVHHL--NLVRLIGYCVE------ 553 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~----~~----------~~~~E~~~l~~l~h~--niv~l~g~~~~------ 553 (790)
+.+-.-....|.+..+.|+.+.||...... .+ .+.+|.+.+.++... .....+++...
T Consensus 28 e~v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 28 EVFRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred cEEecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 344444445577888889999999775322 11 377888888888433 33444555431
Q ss_pred CeEEEEEEEecCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC-------CCcE
Q 046083 554 GSLFLVYEYIENG-NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK-------NFRA 625 (790)
Q Consensus 554 ~~~~lv~e~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~-------~~~~ 625 (790)
...+||+|++++. +|.+++........+...+..++.+++..+.-||..|+ +|+|++++|||++. +..+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi---~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGI---NHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcC---ccCCCChhhEEEeccccCCCCCceE
Confidence 2468999999986 89998864322345667778899999999999999998 99999999999975 4689
Q ss_pred EEEEeCCCcc
Q 046083 626 KVADFGLAKL 635 (790)
Q Consensus 626 kl~DfGla~~ 635 (790)
.|+||+.++.
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998863
No 455
>COG1388 LytE FOG: LysM repeat [Cell envelope biogenesis, outer membrane]
Probab=98.83 E-value=5.9e-09 Score=96.18 Aligned_cols=93 Identities=19% Similarity=0.251 Sum_probs=73.9
Q ss_pred HHHHhCCCHHHHHhhCCCCCC-CCCcCCCCeEEeeee--cccCCCC--Ccc--------------cceeEEeccCCchHH
Q 046083 30 ISNIFGEDIAQILLYNPNIPN-QNTIPSDTRISIPFS--CDCLNGD--FLG--------------HTFTYETQFGDTYEK 90 (790)
Q Consensus 30 Ia~~~~~~~~~l~~~Np~~~~-~~~~~~g~~l~ip~~--~~~~~~~--~~~--------------~~~~Y~V~~GDTl~~ 90 (790)
||.+|++++.+|+.+| .+.. .+.+.+||+|.+|.. .....+. +.. ....|+|++||||+.
T Consensus 1 ia~~~~~~v~~l~~~n-~~~~~s~~i~~gq~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~gdtL~~ 79 (124)
T COG1388 1 IASKYGVSVKALKKAN-ALTGKSDAIKPGQVLKIPGDISSTVNAGQTLSSLSNKVSDSSSASKAPPVVTYTVKKGDTLSK 79 (124)
T ss_pred CcccccccHHHHHHHh-cccCCCCccccCceEEccCCcccccccccccccccceeeccccccccCCCceEEEecCCCHHH
Confidence 6889999999999999 5543 789999999999953 1111110 111 125799999999999
Q ss_pred HHhhhcCCCChHHHHHHccCCCCCCCCCCcEEEEEe
Q 046083 91 VASFAFANLTTEDWVRRVNIYEPTRIPDYAFINVTV 126 (790)
Q Consensus 91 IA~~~~~~~~t~~~l~~~N~~~~~~l~~Gq~l~iP~ 126 (790)
|| ++|+. ++..|+++|.+..+.+++||.|.+|.
T Consensus 80 Ia-~~~~~--tv~~l~~~n~l~~~~i~~gq~l~~~~ 112 (124)
T COG1388 80 IA-RKYGV--TVAELKQLNNLSSDKIKVGQKLKLPV 112 (124)
T ss_pred HH-HHhCC--CHHHHHHHhccCCCceecCcEEEEec
Confidence 99 77877 99999999988777999999999997
No 456
>COG1388 LytE FOG: LysM repeat [Cell envelope biogenesis, outer membrane]
Probab=98.79 E-value=8.2e-09 Score=95.21 Aligned_cols=94 Identities=24% Similarity=0.366 Sum_probs=72.5
Q ss_pred HHHHcCCChhhHhhcCCCCCC-cccccCCceEEecccccc--CCCce---eee-------------eEEEEeccCchHHH
Q 046083 237 ISKVFDTSIKYILSFNPQITN-KDKILAGTRINVPFSCNC--IQNKF---LGH-------------SFSYKVKSGNTYKR 297 (790)
Q Consensus 237 Ia~~~~~~~~~l~~~N~~~~~-~~~l~~gq~l~ip~~~~~--~~~~~---~~~-------------~~~y~V~~gDtl~~ 297 (790)
||.+|++++.+|+++| .+.. .+.+.+||+|.+|..-.- ..+.. ... ..+|+|++||||+.
T Consensus 1 ia~~~~~~v~~l~~~n-~~~~~s~~i~~gq~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~gdtL~~ 79 (124)
T COG1388 1 IASKYGVSVKALKKAN-ALTGKSDAIKPGQVLKIPGDISSTVNAGQTLSSLSNKVSDSSSASKAPPVVTYTVKKGDTLSK 79 (124)
T ss_pred CcccccccHHHHHHHh-cccCCCCccccCceEEccCCcccccccccccccccceeeccccccccCCCceEEEecCCCHHH
Confidence 6889999999999999 7742 788999999999963111 10000 000 14799999999999
Q ss_pred HHHHhhcccccHHHHHhcCCCCCCCCCCCCcEEEEeEe
Q 046083 298 IAELIYANLTTLDWLKSSNAYDENHTPDVSSSVNVIVN 335 (790)
Q Consensus 298 IA~~~~~~l~~~~~l~~~N~~~~~~~~~~Gq~l~ip~~ 335 (790)
||++ |. +++.+|+++|.+..+.+.. ||.|.+|..
T Consensus 80 Ia~~-~~--~tv~~l~~~n~l~~~~i~~-gq~l~~~~~ 113 (124)
T COG1388 80 IARK-YG--VTVAELKQLNNLSSDKIKV-GQKLKLPVS 113 (124)
T ss_pred HHHH-hC--CCHHHHHHHhccCCCceec-CcEEEEecc
Confidence 9954 44 6779999999998887777 999999873
No 457
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.78 E-value=1e-09 Score=127.22 Aligned_cols=243 Identities=22% Similarity=0.317 Sum_probs=161.1
Q ss_pred hcCcccceeeeecCceEEEEEEEC--CceEEEEEeCh------hhHHHHHHHHHHHHhcCCCCCcceEEEEe-cCeEEEE
Q 046083 489 TNDFSMGNKIGQGGFGAVFYAELR--GEKAAIKKMDM------QASKEFLAELKVLTHVHHLNLVRLIGYCV-EGSLFLV 559 (790)
Q Consensus 489 ~~~f~~~~~lG~G~fg~Vy~a~~~--g~~vavK~~~~------~~~~~~~~E~~~l~~l~h~niv~l~g~~~-~~~~~lv 559 (790)
.+.|.+.+-+-+|.++.++.+.-. |...+.|.... ...+....+-.++-..+||-++...--+. ....+|+
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 455677778889999999877654 43334333221 11222223333333334455444332222 2347999
Q ss_pred EEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 560 YEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 560 ~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
++|+.+++|...|+..+ ..+..........+...++|||...+ .|+|++|.|.|...++..++.|||.......-
T Consensus 883 ~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r---~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLR---KHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred hHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchh---hcccccccchhhcccCCcccCccccccccccc
Confidence 99999999999999865 24444445566677889999999876 99999999999999999999999844321100
Q ss_pred --------C----------------------cccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccccc
Q 046083 640 --------S----------------------ASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVK 689 (790)
Q Consensus 640 --------~----------------------~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~ 689 (790)
. ........||+.|.+||.+.+......+|+|++|++++|.++|.+||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 0 0011235689999999999999999999999999999999999999865
Q ss_pred cccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHH
Q 046083 690 TNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMR 756 (790)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~ 756 (790)
.... ..++.+..... + -...+.....+..+++...+..+|.+|-.+.
T Consensus 1038 ~tpq--------~~f~ni~~~~~----------~--~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ETPQ--------QIFENILNRDI----------P--WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cchh--------hhhhccccCCC----------C--CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 4331 11111111100 0 0122344555677888888899999997665
No 458
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.76 E-value=1.3e-07 Score=102.53 Aligned_cols=163 Identities=17% Similarity=0.227 Sum_probs=125.2
Q ss_pred eEEEEEEEC--CceEEEEEeCh---hhHHHHHHHHHHHHhcCCCCCcceEEEEe-----cCeEEEEEEEecC-CChhhhh
Q 046083 504 GAVFYAELR--GEKAAIKKMDM---QASKEFLAELKVLTHVHHLNLVRLIGYCV-----EGSLFLVYEYIEN-GNLNQHL 572 (790)
Q Consensus 504 g~Vy~a~~~--g~~vavK~~~~---~~~~~~~~E~~~l~~l~h~niv~l~g~~~-----~~~~~lv~e~~~~-g~L~~~l 572 (790)
.+.|++... |..+++|+++. ........-+++++++.|.|+|++..++. +..+++||+|.++ ++|.++-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 578999765 88999999942 22233445688999999999999988654 4458999999986 5777643
Q ss_pred hcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccC
Q 046083 573 RGS-------------GKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVG 639 (790)
Q Consensus 573 ~~~-------------~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~ 639 (790)
-.. .....++...|.++.|+..||.++|+.|. ..+-|.+++||++.+.+++|+..|........
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGL---Ack~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGL---ACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCc---eeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 221 11246788999999999999999999998 88999999999999999999999987765443
Q ss_pred CcccccccccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccc
Q 046083 640 SASVHTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAV 687 (790)
Q Consensus 640 ~~~~~~~~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~ 687 (790)
... -+ +--.+-|.=-||.+++.|.||...-
T Consensus 447 ~~~---------------~l---e~~Qq~D~~~lG~ll~aLAt~~~ns 476 (655)
T KOG3741|consen 447 PTE---------------PL---ESQQQNDLRDLGLLLLALATGTENS 476 (655)
T ss_pred CCc---------------ch---hHHhhhhHHHHHHHHHHHhhccccc
Confidence 311 11 1123679999999999999996553
No 459
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.70 E-value=1.1e-08 Score=113.39 Aligned_cols=245 Identities=20% Similarity=0.228 Sum_probs=165.7
Q ss_pred HHHhcCcccceeeeecCceEEEEEEEC---CceEEEEEeChhhH----HH-HHHHHHHHHhc-CCCCCcceEE-EEecCe
Q 046083 486 AKATNDFSMGNKIGQGGFGAVFYAELR---GEKAAIKKMDMQAS----KE-FLAELKVLTHV-HHLNLVRLIG-YCVEGS 555 (790)
Q Consensus 486 ~~~~~~f~~~~~lG~G~fg~Vy~a~~~---g~~vavK~~~~~~~----~~-~~~E~~~l~~l-~h~niv~l~g-~~~~~~ 555 (790)
..-+.+|..+..||.|.|+.|+....+ +..+++|.+..... +. -..|+-+...+ .|.++++.+. |.....
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 344568999999999999999988754 55778776643211 11 12344444444 5888887765 444556
Q ss_pred EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCC-CcEEEEEeCCCc
Q 046083 556 LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKN-FRAKVADFGLAK 634 (790)
Q Consensus 556 ~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~-~~~kl~DfGla~ 634 (790)
.|+=-||++++++...+.- ...++...++++..+++.++.++|+... +|+|+||+||++..+ +..++.|||.+.
T Consensus 341 ~~ip~e~~~~~s~~l~~~~--~~~~d~~~~~~~~~q~~~~l~~i~s~~~---~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSVT--SQMLDEDPRLRLTAQILTALNVIHSKLF---VHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred ccCchhhhcCcchhhhhHH--HHhcCcchhhhhHHHHHhccccccchhh---hcccccccceeeccchhhhhcccccccc
Confidence 7788999999988766522 2347777888999999999999999887 999999999999886 788999999986
Q ss_pred ccccCCcccccccccCCCcc--chhcccCCCCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCC
Q 046083 635 LTEVGSASVHTRLVGTFGYM--PPEYAQYGEVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPD 712 (790)
Q Consensus 635 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 712 (790)
.+..... ......++. +++......+-.+.|+||||.-+.|.++|..--.....
T Consensus 416 ~~~~~~~----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-------------------- 471 (524)
T KOG0601|consen 416 RLAFSSG----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-------------------- 471 (524)
T ss_pred ccceecc----cccccccccccchhhccccccccccccccccccccccccCcccCccccc--------------------
Confidence 4221111 112233344 55566667788899999999999999987433221110
Q ss_pred ChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCHHHHHHHHHhh
Q 046083 713 PREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSMRAIVVALMTL 765 (790)
Q Consensus 713 ~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~~evl~~L~~l 765 (790)
+..+....+ ...+ .....+..+..-+...++..||...++..+....
T Consensus 472 ----~~~i~~~~~-p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 472 ----SLTIRSGDT-PNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ----ceeeecccc-cCCC-chHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 000000000 0111 1225667788889999999999998877665543
No 460
>PRK09902 hypothetical protein; Provisional
Probab=98.64 E-value=4.9e-07 Score=89.61 Aligned_cols=135 Identities=14% Similarity=0.171 Sum_probs=106.5
Q ss_pred eeeecCceEEEEEEECCceEEEEEeC---------hhhHHHHHHHHHHHHhcCC--CCCcceEEEEe---cC---eEEEE
Q 046083 497 KIGQGGFGAVFYAELRGEKAAIKKMD---------MQASKEFLAELKVLTHVHH--LNLVRLIGYCV---EG---SLFLV 559 (790)
Q Consensus 497 ~lG~G~fg~Vy~a~~~g~~vavK~~~---------~~~~~~~~~E~~~l~~l~h--~niv~l~g~~~---~~---~~~lv 559 (790)
--|+||.+-|++..+.|..+-+|+-. +.....|.+|+..|.++.. -.+.+.. ++. .+ ..+||
T Consensus 25 N~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 25 NYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred CcCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 34678999999999988889999765 3345679999999999853 2344444 332 11 26899
Q ss_pred EEEecC-CChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCc--EEEEEeCCCcc
Q 046083 560 YEYIEN-GNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFR--AKVADFGLAKL 635 (790)
Q Consensus 560 ~e~~~~-g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~--~kl~DfGla~~ 635 (790)
+|-+++ -+|.+++......+.+...+..++.+++..++-||+.++ .|+|+.+.|||++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv---~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNR---QHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCC---cCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998864 489999876554567788888999999999999999999 99999999999986666 99999987763
No 461
>PRK14125 cell division suppressor protein YneA; Provisional
Probab=98.59 E-value=6.8e-08 Score=84.48 Aligned_cols=50 Identities=24% Similarity=0.250 Sum_probs=41.3
Q ss_pred ceeEEeccCCchHHHHhhhcCC---CCh---HHHHHHccCCCCCCCCCCcEEEEEee
Q 046083 77 TFTYETQFGDTYEKVASFAFAN---LTT---EDWVRRVNIYEPTRIPDYAFINVTVN 127 (790)
Q Consensus 77 ~~~Y~V~~GDTl~~IA~~~~~~---~~t---~~~l~~~N~~~~~~l~~Gq~l~iP~~ 127 (790)
..+|+|++|||||+|| ++|.. ++. .++|++.|.++++.|++||+|.||..
T Consensus 36 ~~~~tV~~GDTLW~IA-~~y~~~~~l~~~~~v~~I~~~N~l~~~~I~~Gq~L~IP~~ 91 (103)
T PRK14125 36 YVEITVQEGDTLWALA-DQYAGKHHMAKNEFIEWVEDVNNLPSGHIKAGDKLVIPVL 91 (103)
T ss_pred cEEEEECCCCCHHHHH-HHhCCCcCCCHHHHHHHHHHhcCCCCCcCCCCCEEEEecC
Confidence 4689999999999999 67753 122 56788999888889999999999974
No 462
>TIGR02899 spore_safA spore coat assembly protein SafA. in which one of which is found in most examples of endospore-forming bacteria. Lysin motifs are repeated in many proteins.
Probab=98.59 E-value=6.5e-08 Score=71.24 Aligned_cols=44 Identities=30% Similarity=0.470 Sum_probs=40.2
Q ss_pred cCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCCCeEEeee
Q 046083 21 VWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSDTRISIPF 64 (790)
Q Consensus 21 v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g~~l~ip~ 64 (790)
|++||||++||++|+++.++|+++||.+.++..+.+||.|.||.
T Consensus 1 v~~gdtl~~IA~~~~~~~~~l~~~N~~~~~~~~~~~g~~l~ip~ 44 (44)
T TIGR02899 1 VQKGDTLWKIAKKYGVDFDELIQANPQLSNPNLIYPGMKIKIPS 44 (44)
T ss_pred CCCCCCHHHHHHHHCcCHHHHHHHhhcCCCCCCcCCCCEEecCC
Confidence 68999999999999999999999998776667899999999983
No 463
>PRK14125 cell division suppressor protein YneA; Provisional
Probab=98.54 E-value=1e-07 Score=83.41 Aligned_cols=52 Identities=15% Similarity=0.297 Sum_probs=44.4
Q ss_pred hheeeecCCCCCHHHHHHHcCCC--------hhhHhhcCCCCCCcccccCCceEEecccccc
Q 046083 222 ALASYYLWKGANLTFISKVFDTS--------IKYILSFNPQITNKDKILAGTRINVPFSCNC 275 (790)
Q Consensus 222 ~~~~y~v~~gdtl~~Ia~~~~~~--------~~~l~~~N~~~~~~~~l~~gq~l~ip~~~~~ 275 (790)
.+..|+|++|||||+||++|+++ ++.|++.| ++. ++.|++||.|.||...+.
T Consensus 35 ~~~~~tV~~GDTLW~IA~~y~~~~~l~~~~~v~~I~~~N-~l~-~~~I~~Gq~L~IP~~~~~ 94 (103)
T PRK14125 35 QYVEITVQEGDTLWALADQYAGKHHMAKNEFIEWVEDVN-NLP-SGHIKAGDKLVIPVLKSK 94 (103)
T ss_pred CcEEEEECCCCCHHHHHHHhCCCcCCCHHHHHHHHHHhc-CCC-CCcCCCCCEEEEecCCCC
Confidence 56689999999999999999875 57788889 885 457999999999987654
No 464
>TIGR02899 spore_safA spore coat assembly protein SafA. in which one of which is found in most examples of endospore-forming bacteria. Lysin motifs are repeated in many proteins.
Probab=98.50 E-value=1.3e-07 Score=69.64 Aligned_cols=44 Identities=30% Similarity=0.518 Sum_probs=39.0
Q ss_pred cCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEecc
Q 046083 228 LWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVPF 271 (790)
Q Consensus 228 v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip~ 271 (790)
|++||||++||++|++++.+|.++|+.+.+++.+.+||.|.||.
T Consensus 1 v~~gdtl~~IA~~~~~~~~~l~~~N~~~~~~~~~~~g~~l~ip~ 44 (44)
T TIGR02899 1 VQKGDTLWKIAKKYGVDFDELIQANPQLSNPNLIYPGMKIKIPS 44 (44)
T ss_pred CCCCCCHHHHHHHHCcCHHHHHHHhhcCCCCCCcCCCCEEecCC
Confidence 57899999999999999999999996565556799999999983
No 465
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.48 E-value=1.2e-06 Score=86.45 Aligned_cols=121 Identities=21% Similarity=0.256 Sum_probs=79.3
Q ss_pred EEEEEEEC-CceEEEEEeChh-----------------------------hHHHHHHHHHHHHhcCCC--CCcceEEEEe
Q 046083 505 AVFYAELR-GEKAAIKKMDMQ-----------------------------ASKEFLAELKVLTHVHHL--NLVRLIGYCV 552 (790)
Q Consensus 505 ~Vy~a~~~-g~~vavK~~~~~-----------------------------~~~~~~~E~~~l~~l~h~--niv~l~g~~~ 552 (790)
.||.|... |..+|||..+.. ......+|.+.|.++... ++.+.+.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999875 889999976310 012367899999999765 456666542
Q ss_pred cCeEEEEEEEec--CCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH-HHhCCCCceeecCCCCCCEEecCCCcEEEEE
Q 046083 553 EGSLFLVYEYIE--NGNLNQHLRGSGKDTLTWSARMQIALDSARGLEY-IHEHTVPVYIHRDIKPANILIDKNFRAKVAD 629 (790)
Q Consensus 553 ~~~~~lv~e~~~--~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~-LH~~~~~~~vH~dlkp~NILl~~~~~~kl~D 629 (790)
.-.|||||++ +..+..+.... ++......++.+++..+.. +|..++ +|+||.+.|||++++ .+.|+|
T Consensus 80 --~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~gi---vHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 80 --RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAGI---VHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp --TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTTE---EESS-STTSEEEETT-CEEE--
T ss_pred --CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcCc---eecCCChhhEEeecc-eEEEEe
Confidence 3479999999 65555443321 1123345667777775555 578887 999999999999988 999999
Q ss_pred eCCCccc
Q 046083 630 FGLAKLT 636 (790)
Q Consensus 630 fGla~~~ 636 (790)
||.+...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9988754
No 466
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.40 E-value=1.1e-07 Score=107.06 Aligned_cols=150 Identities=19% Similarity=0.353 Sum_probs=102.4
Q ss_pred HHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcc--------cccccccCCCccchhcccCC
Q 046083 591 DSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSAS--------VHTRLVGTFGYMPPEYAQYG 662 (790)
Q Consensus 591 ~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~ 662 (790)
+++.|+.|+|..-. +||++|.|++|.++.++..||+.|+.+......... ..--..-...|.|||++.+.
T Consensus 107 ~v~dgl~flh~sAk--~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSAK--VVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCcc--eeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 44589999998754 699999999999999999999999987644321110 11112345689999999998
Q ss_pred CCCchhhHHHHHHHHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHH
Q 046083 663 EVSPKIDVYAFGVVLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLAR 742 (790)
Q Consensus 663 ~~s~~sDvwS~Gvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~ 742 (790)
..+.++|+||+|++++-+..|..+........ +. .......+..-...++.+.+.++.+=+.
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~-----~~-------------~~~~~~~~~~~~~~~s~~~p~el~~~l~ 246 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGL-----LS-------------YSFSRNLLNAGAFGYSNNLPSELRESLK 246 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCc-----ch-------------hhhhhcccccccccccccCcHHHHHHHH
Confidence 89999999999999999996655543322110 00 0000111111111223455677888888
Q ss_pred HccccCCCCCCCHHHHHH
Q 046083 743 ACTQENPQLRPSMRAIVV 760 (790)
Q Consensus 743 ~Cl~~dP~~RPt~~evl~ 760 (790)
+++..++.-||++.++..
T Consensus 247 k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 247 KLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HHhcCCcccCcchhhhhc
Confidence 899999999998877643
No 467
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.37 E-value=3.4e-06 Score=85.14 Aligned_cols=105 Identities=21% Similarity=0.293 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhcC--CCCCcceEEEEec-----CeEEEEEEEecCC-ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHH
Q 046083 527 KEFLAELKVLTHVH--HLNLVRLIGYCVE-----GSLFLVYEYIENG-NLNQHLRGSGKDTLTWSARMQIALDSARGLEY 598 (790)
Q Consensus 527 ~~~~~E~~~l~~l~--h~niv~l~g~~~~-----~~~~lv~e~~~~g-~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~ 598 (790)
....+|.+.+..+. .-...+.+++... ...++|+|++++. +|.+++..... ++......++.++++.++-
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIAK 133 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHHH
Confidence 35677888887774 3445566666543 1358999999984 89999886332 5566778899999999999
Q ss_pred HHhCCCCceeecCCCCCCEEecCCC---cEEEEEeCCCccc
Q 046083 599 IHEHTVPVYIHRDIKPANILIDKNF---RAKVADFGLAKLT 636 (790)
Q Consensus 599 LH~~~~~~~vH~dlkp~NILl~~~~---~~kl~DfGla~~~ 636 (790)
||..++ +|+|+++.|||++.+. .+.++||+-++..
T Consensus 134 lH~~gi---~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 LHDAGI---YHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHCcC---CCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999998 9999999999999887 8999999987753
No 468
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.35 E-value=3.3e-06 Score=85.63 Aligned_cols=131 Identities=22% Similarity=0.219 Sum_probs=96.0
Q ss_pred cccceeeeecCceEEEEEEEC-CceEEEEEeChh-------------------------hHHHHHHHHHHHHhcCCC--C
Q 046083 492 FSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQ-------------------------ASKEFLAELKVLTHVHHL--N 543 (790)
Q Consensus 492 f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~-------------------------~~~~~~~E~~~l~~l~h~--n 543 (790)
..++.+||-|.-+.||.|... |.++|||.-+.. ......+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 566789999999999999987 999999954210 112357899999998654 5
Q ss_pred CcceEEEEecCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCC
Q 046083 544 LVRLIGYCVEGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNF 623 (790)
Q Consensus 544 iv~l~g~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~ 623 (790)
+.+.+++ +...+||||+++-.|...-- +....-.++..|++-+.-+-..|+ ||+|+++-||+++++|
T Consensus 173 VP~P~~~---nRHaVvMe~ieG~eL~~~r~-------~~en~~~il~~il~~~~~~~~~Gi---VHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIAW---NRHAVVMEYIEGVELYRLRL-------DVENPDEILDKILEEVRKAYRRGI---VHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCcccc---ccceeeeehcccceeecccC-------cccCHHHHHHHHHHHHHHHHHcCc---cccCCchheEEEecCC
Confidence 6665554 24579999999977765431 122223444555555555557887 9999999999999999
Q ss_pred cEEEEEeCCCcc
Q 046083 624 RAKVADFGLAKL 635 (790)
Q Consensus 624 ~~kl~DfGla~~ 635 (790)
.+.++||--+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999987654
No 469
>TIGR02907 spore_VI_D stage VI sporulation protein D. SpoVID, the stage VI sporulation protein D, is restricted to endospore-forming members of the bacteria, all of which are found among the Firmicutes. It is widely distributed but not quite universal in this group. Between well-conserved N-terminal and C-terminal domains is a poorly conserved, low-complexity region of variable length, rich enough in glutamic acid to cause spurious BLAST search results unless a filter is used. The seed alignment for this model was trimmed, in effect, by choosing member sequences in which these regions are relatively short. SpoVID is involved in spore coat assembly by the mother cell compartment late in the process of sporulation.
Probab=98.25 E-value=8.8e-07 Score=91.63 Aligned_cols=48 Identities=17% Similarity=0.349 Sum_probs=44.5
Q ss_pred hhheeeecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEec
Q 046083 221 LALASYYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVP 270 (790)
Q Consensus 221 ~~~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip 270 (790)
..|..|+|++||||+.||++||++++.|+++| ++. ++.|++||.|+||
T Consensus 291 ~~~~~YiVq~GDTL~sIAkRYGVSV~~L~r~N-~L~-~~~L~~GQ~L~IP 338 (338)
T TIGR02907 291 TKLRMCIVQEGDTIETIAERYEISVSQLIRHN-QLE-DFEVNEGQILYIP 338 (338)
T ss_pred cccEEEEECCCCCHHHHHHHHCcCHHHHHHHh-CCC-ccccCCCCEEEeC
Confidence 35789999999999999999999999999999 785 6789999999998
No 470
>COG3858 Predicted glycosyl hydrolase [General function prediction only]
Probab=98.25 E-value=1.4e-06 Score=92.61 Aligned_cols=94 Identities=19% Similarity=0.170 Sum_probs=81.3
Q ss_pred hcccCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCCCeEEeeeecccCCCCCcccceeEEeccCCchHHHHhhhcC
Q 046083 18 SYYVWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSDTRISIPFSCDCLNGDFLGHTFTYETQFGDTYEKVASFAFA 97 (790)
Q Consensus 18 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g~~l~ip~~~~~~~~~~~~~~~~Y~V~~GDTl~~IA~~~~~ 97 (790)
.|-|++||++..||..|+.+.++|...| .+.+ +.+++||++.||... ..|.|++|||+++|| .+++
T Consensus 3 i~~~~pg~~~~~i~~~~~~~~~~i~~~~-~~~~-d~~~~~q~~~v~~~~-----------~~y~~~~~d~~~Sia-~~~~ 68 (423)
T COG3858 3 IHLVGPGDSRLIIAVYFPYTNNRIVNGN-DYTN-DDLVDGQTFVVPPSG-----------HFYDVGPGDTLTSIA-RTVG 68 (423)
T ss_pred EEEccCCceeeeehhhcccccccccccc-cccc-ccccCceeEEECCcc-----------eEEEecCCcchhhhh-hhhc
Confidence 4789999999999999999999998888 7777 889999999999743 579999999999999 6775
Q ss_pred CCChHHHHHHcc-CCCCCCCCCCcEEEEEee
Q 046083 98 NLTTEDWVRRVN-IYEPTRIPDYAFINVTVN 127 (790)
Q Consensus 98 ~~~t~~~l~~~N-~~~~~~l~~Gq~l~iP~~ 127 (790)
. |.+.+...| ...|.-+.+|-.|.+|..
T Consensus 69 v--t~~~~~~m~~~~~~~~l~~~~~l~~P~~ 97 (423)
T COG3858 69 V--TQDSAAIMNFVICPGYLQYGLNLYIPSA 97 (423)
T ss_pred C--CHHHHHhhcccccccceeeeeEEeccCC
Confidence 4 666666666 778889999999999974
No 471
>cd00118 LysM Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function.
Probab=98.24 E-value=1.4e-06 Score=63.96 Aligned_cols=45 Identities=20% Similarity=0.438 Sum_probs=40.8
Q ss_pred hcccCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCCCeEEee
Q 046083 18 SYYVWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSDTRISIP 63 (790)
Q Consensus 18 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g~~l~ip 63 (790)
.|+|++|||++.||++|+++..+|+++|+. .....+.+|+.|.||
T Consensus 2 ~~~v~~gdt~~~ia~~~~~~~~~~~~~N~~-~~~~~~~~g~~l~ip 46 (46)
T cd00118 2 TYTVKKGDTLSSIAQRYGISVEELLKLNGL-SDPDNLQVGQKLKIP 46 (46)
T ss_pred EEEECCCCCHHHHHHHHCcCHHHHHHHcCC-CCccccCCCCEEecC
Confidence 689999999999999999999999999965 455789999999987
No 472
>cd00118 LysM Lysin domain, found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function.
Probab=98.24 E-value=1.6e-06 Score=63.69 Aligned_cols=45 Identities=24% Similarity=0.584 Sum_probs=40.5
Q ss_pred eeecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEec
Q 046083 225 SYYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVP 270 (790)
Q Consensus 225 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip 270 (790)
.|++++|||++.||++|+++..+|.++|+ ......+.+|+.|.||
T Consensus 2 ~~~v~~gdt~~~ia~~~~~~~~~~~~~N~-~~~~~~~~~g~~l~ip 46 (46)
T cd00118 2 TYTVKKGDTLSSIAQRYGISVEELLKLNG-LSDPDNLQVGQKLKIP 46 (46)
T ss_pred EEEECCCCCHHHHHHHHCcCHHHHHHHcC-CCCccccCCCCEEecC
Confidence 59999999999999999999999999995 4355689999999987
No 473
>PRK10871 nlpD lipoprotein NlpD; Provisional
Probab=98.18 E-value=1.3e-06 Score=91.57 Aligned_cols=48 Identities=23% Similarity=0.347 Sum_probs=45.2
Q ss_pred hhcccCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCCCeEEeeee
Q 046083 17 ASYYVWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSDTRISIPFS 65 (790)
Q Consensus 17 ~~y~v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g~~l~ip~~ 65 (790)
.+|+|++||||+.||.+||+++.+|+++| ++.++..|.+||.|.||.+
T Consensus 61 ~~y~Vk~GDTL~~IA~~~g~~~~~La~~N-~l~~p~~I~~GQ~L~i~~~ 108 (319)
T PRK10871 61 STYTVKKGDTLFYIAWITGNDFRDLAQRN-NIQAPYSLNVGQTLQVGNA 108 (319)
T ss_pred CceEECCCCHHHHHHHHHCcCHHHHHHhc-CCCCCccccCCCEEEeCCC
Confidence 36999999999999999999999999999 8888999999999999864
No 474
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.12 E-value=5.9e-05 Score=77.28 Aligned_cols=141 Identities=21% Similarity=0.249 Sum_probs=87.1
Q ss_pred ceeeeecCceEEEEEEECCceEEEEEeChh-hHHHHHHHHHHHHhcCCC--CCcceEEEEec----CeEEEEEEEecCCC
Q 046083 495 GNKIGQGGFGAVFYAELRGEKAAIKKMDMQ-ASKEFLAELKVLTHVHHL--NLVRLIGYCVE----GSLFLVYEYIENGN 567 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~-~~~~~~~E~~~l~~l~h~--niv~l~g~~~~----~~~~lv~e~~~~g~ 567 (790)
.+.|+.|..+.||+....++.+++|..... ....+..|..+++.+... .+.+++.++.. +..+++|+++++..
T Consensus 2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~ 81 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRP 81 (239)
T ss_dssp EEEEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEE
T ss_pred CccCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecccc
Confidence 468899999999999998889999998765 556788899999888533 35566765542 23689999999988
Q ss_pred hhh----------------hh---hcC--CCCCCCHHH---------HHHH------------HHHHHH-HHHHHHh---
Q 046083 568 LNQ----------------HL---RGS--GKDTLTWSA---------RMQI------------ALDSAR-GLEYIHE--- 601 (790)
Q Consensus 568 L~~----------------~l---~~~--~~~~l~~~~---------~~~i------------~~~ia~-~L~~LH~--- 601 (790)
+.. .+ +.. ....+.+.. .... ...+.+ .++.++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (239)
T PF01636_consen 82 LDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALLP 161 (239)
T ss_dssp HHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhhc
Confidence 777 11 111 111111111 0000 111222 3334442
Q ss_pred -CCCCceeecCCCCCCEEec-CCCcEEEEEeCCCcc
Q 046083 602 -HTVPVYIHRDIKPANILID-KNFRAKVADFGLAKL 635 (790)
Q Consensus 602 -~~~~~~vH~dlkp~NILl~-~~~~~kl~DfGla~~ 635 (790)
..-..++|+|+.|.|||++ +++.+.|+||+.+..
T Consensus 162 ~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 162 KPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp CCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred cCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 1334579999999999999 666678999998763
No 475
>PRK10871 nlpD lipoprotein NlpD; Provisional
Probab=98.11 E-value=2.4e-06 Score=89.66 Aligned_cols=48 Identities=19% Similarity=0.288 Sum_probs=45.0
Q ss_pred eeeecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEeccc
Q 046083 224 ASYYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVPFS 272 (790)
Q Consensus 224 ~~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip~~ 272 (790)
..|+|++||||+.||.+||+++.+|+++| +|.++..|++||.|.||.+
T Consensus 61 ~~y~Vk~GDTL~~IA~~~g~~~~~La~~N-~l~~p~~I~~GQ~L~i~~~ 108 (319)
T PRK10871 61 STYTVKKGDTLFYIAWITGNDFRDLAQRN-NIQAPYSLNVGQTLQVGNA 108 (319)
T ss_pred CceEECCCCHHHHHHHHHCcCHHHHHHhc-CCCCCccccCCCEEEeCCC
Confidence 36999999999999999999999999999 8988899999999999864
No 476
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.10 E-value=8.2e-05 Score=74.23 Aligned_cols=133 Identities=19% Similarity=0.228 Sum_probs=93.2
Q ss_pred HhcCcccceeeeecCceEEEEEEECCceEEEEEeChhhH------------HHHHHHHHHHHhcC---CCCCcceEEEEe
Q 046083 488 ATNDFSMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQAS------------KEFLAELKVLTHVH---HLNLVRLIGYCV 552 (790)
Q Consensus 488 ~~~~f~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~~------------~~~~~E~~~l~~l~---h~niv~l~g~~~ 552 (790)
...+|...+.+-......|.+...+++.+++|..+.+.. ....+++..+.+++ --....++-...
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 346788888888888888999999999999998864322 11233444444442 233333333322
Q ss_pred ------cCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEE
Q 046083 553 ------EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAK 626 (790)
Q Consensus 553 ------~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~k 626 (790)
....+++|||++|-.|.++.. ++. .+...+.+++.-||..|. .|+|..|.|+++++++ ++
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~---~HGD~hpgNFlv~~~~-i~ 174 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGF---YHGDPHPGNFLVSNNG-IR 174 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCC---ccCCCCcCcEEEECCc-EE
Confidence 233578999999988876543 222 244567788999999998 9999999999998654 99
Q ss_pred EEEeCCCc
Q 046083 627 VADFGLAK 634 (790)
Q Consensus 627 l~DfGla~ 634 (790)
+.||+..+
T Consensus 175 iID~~~k~ 182 (229)
T PF06176_consen 175 IIDTQGKR 182 (229)
T ss_pred EEECcccc
Confidence 99998765
No 477
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.10 E-value=5.2e-05 Score=77.58 Aligned_cols=137 Identities=20% Similarity=0.271 Sum_probs=84.2
Q ss_pred eeeeecCceEEEEEEECCceEEEEEeChh-hHHHHHHHHHHHHhcCCCC--CcceEEEEec-CeEEEEEEEecCCC-hhh
Q 046083 496 NKIGQGGFGAVFYAELRGEKAAIKKMDMQ-ASKEFLAELKVLTHVHHLN--LVRLIGYCVE-GSLFLVYEYIENGN-LNQ 570 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~g~~vavK~~~~~-~~~~~~~E~~~l~~l~h~n--iv~l~g~~~~-~~~~lv~e~~~~g~-L~~ 570 (790)
..||+|..+.||+. .+..+++|..... ......+|.++++.+..-. +.+.+++..+ +...+|||+++|.+ +..
T Consensus 7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~ 84 (226)
T TIGR02172 7 TQTGEGGNGESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSR 84 (226)
T ss_pred eeecCCCCcceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhh
Confidence 68899999999984 3667788887653 3456788999999986443 4566777654 34688999999963 211
Q ss_pred h---------------------hhcCCCCCCCHHHHHH-HHH----------HHHH-HHHHHHhC-CCCceeecCCCCCC
Q 046083 571 H---------------------LRGSGKDTLTWSARMQ-IAL----------DSAR-GLEYIHEH-TVPVYIHRDIKPAN 616 (790)
Q Consensus 571 ~---------------------l~~~~~~~l~~~~~~~-i~~----------~ia~-~L~~LH~~-~~~~~vH~dlkp~N 616 (790)
. ||.-............ +.. .+.+ ...+|... ..+.++|+|+.|.|
T Consensus 85 ~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~N 164 (226)
T TIGR02172 85 IISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIGN 164 (226)
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCCc
Confidence 1 1111001111111110 000 0111 12222221 12346999999999
Q ss_pred EEecCCCcEEEEEeCCCcc
Q 046083 617 ILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 617 ILl~~~~~~kl~DfGla~~ 635 (790)
|++++++ +.++||+.+..
T Consensus 165 ii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 165 LITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred EEEcCCC-cEEEechhcCc
Confidence 9999888 99999998753
No 478
>COG3858 Predicted glycosyl hydrolase [General function prediction only]
Probab=98.09 E-value=3.3e-06 Score=89.80 Aligned_cols=94 Identities=22% Similarity=0.171 Sum_probs=77.7
Q ss_pred eeecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEeccccccCCCceeeeeEEEEeccCchHHHHHHHhhc
Q 046083 225 SYYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINVPFSCNCIQNKFLGHSFSYKVKSGNTYKRIAELIYA 304 (790)
Q Consensus 225 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~ip~~~~~~~~~~~~~~~~y~V~~gDtl~~IA~~~~~ 304 (790)
.|-+++||++..|+++|+++...|...| .+++ +.+.+||++.||... ..|.|++|||+++||++ +.
T Consensus 3 i~~~~pg~~~~~i~~~~~~~~~~i~~~~-~~~~-d~~~~~q~~~v~~~~-----------~~y~~~~~d~~~Sia~~-~~ 68 (423)
T COG3858 3 IHLVGPGDSRLIIAVYFPYTNNRIVNGN-DYTN-DDLVDGQTFVVPPSG-----------HFYDVGPGDTLTSIART-VG 68 (423)
T ss_pred EEEccCCceeeeehhhcccccccccccc-cccc-ccccCceeEEECCcc-----------eEEEecCCcchhhhhhh-hc
Confidence 5889999999999999999999998777 7766 889999999999542 25999999999999955 44
Q ss_pred ccccHHHHHhcCC-CCCCCCCCCCcEEEEeEe
Q 046083 305 NLTTLDWLKSSNA-YDENHTPDVSSSVNVIVN 335 (790)
Q Consensus 305 ~l~~~~~l~~~N~-~~~~~~~~~Gq~l~ip~~ 335 (790)
||.+.+...|. ..+.-+.. |-.|.+|..
T Consensus 69 --vt~~~~~~m~~~~~~~~l~~-~~~l~~P~~ 97 (423)
T COG3858 69 --VTQDSAAIMNFVICPGYLQY-GLNLYIPSA 97 (423)
T ss_pred --CCHHHHHhhcccccccceee-eeEEeccCC
Confidence 77799999987 44445555 888888853
No 479
>TIGR02907 spore_VI_D stage VI sporulation protein D. SpoVID, the stage VI sporulation protein D, is restricted to endospore-forming members of the bacteria, all of which are found among the Firmicutes. It is widely distributed but not quite universal in this group. Between well-conserved N-terminal and C-terminal domains is a poorly conserved, low-complexity region of variable length, rich enough in glutamic acid to cause spurious BLAST search results unless a filter is used. The seed alignment for this model was trimmed, in effect, by choosing member sequences in which these regions are relatively short. SpoVID is involved in spore coat assembly by the mother cell compartment late in the process of sporulation.
Probab=98.04 E-value=3.6e-06 Score=87.13 Aligned_cols=46 Identities=20% Similarity=0.284 Sum_probs=42.7
Q ss_pred hhhcccCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCCCeEEee
Q 046083 16 LASYYVWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSDTRISIP 63 (790)
Q Consensus 16 ~~~y~v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g~~l~ip 63 (790)
...|+|++||||+.||++||+++..|+++| ++. ++.|.+||.|+||
T Consensus 293 ~~~YiVq~GDTL~sIAkRYGVSV~~L~r~N-~L~-~~~L~~GQ~L~IP 338 (338)
T TIGR02907 293 LRMCIVQEGDTIETIAERYEISVSQLIRHN-QLE-DFEVNEGQILYIP 338 (338)
T ss_pred cEEEEECCCCCHHHHHHHHCcCHHHHHHHh-CCC-ccccCCCCEEEeC
Confidence 457999999999999999999999999999 776 6899999999998
No 480
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.00 E-value=7.6e-05 Score=77.49 Aligned_cols=138 Identities=15% Similarity=0.147 Sum_probs=85.7
Q ss_pred eeeecCc-eEEEEEEECCceEEEEEeChhhHHHHHHHHHHHHhcC-CCCCcceEEEEec-CeEEEEEEEecCCChhhhh-
Q 046083 497 KIGQGGF-GAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVH-HLNLVRLIGYCVE-GSLFLVYEYIENGNLNQHL- 572 (790)
Q Consensus 497 ~lG~G~f-g~Vy~a~~~g~~vavK~~~~~~~~~~~~E~~~l~~l~-h~niv~l~g~~~~-~~~~lv~e~~~~g~L~~~l- 572 (790)
.|-.|.. ..||+....+..+.+|........++.+|++++..+. +--+.+++++... +..++|||+++|.+|....
T Consensus 5 ~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~ 84 (244)
T cd05150 5 RVTEGQSGATVYRLDGKNPGLYLKIAPSGPTYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWE 84 (244)
T ss_pred ecCCCCCcCeEEEEcCCCCcEEEEecCCCcccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhc
Confidence 4555555 7899998777888899887654456778999998884 4345566766654 3478999999998776432
Q ss_pred ------------------hcCCC--CCCC--HHHHHHHHH--------------------HHHHHHHHHHh----CCCCc
Q 046083 573 ------------------RGSGK--DTLT--WSARMQIAL--------------------DSARGLEYIHE----HTVPV 606 (790)
Q Consensus 573 ------------------~~~~~--~~l~--~~~~~~i~~--------------------~ia~~L~~LH~----~~~~~ 606 (790)
+.... .++. ......... .+...+..|-. ..-+.
T Consensus 85 ~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 164 (244)
T cd05150 85 ELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLV 164 (244)
T ss_pred ccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceE
Confidence 11100 0111 001110000 01111222211 12245
Q ss_pred eeecCCCCCCEEecCCCcEEEEEeCCCc
Q 046083 607 YIHRDIKPANILIDKNFRAKVADFGLAK 634 (790)
Q Consensus 607 ~vH~dlkp~NILl~~~~~~kl~DfGla~ 634 (790)
++|+|+.|.|||++++....|+||+.+.
T Consensus 165 l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 165 VTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred EECCCCCCccEEEeCCcEEEEEEccccc
Confidence 8999999999999998778899999875
No 481
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.92 E-value=5.7e-05 Score=85.66 Aligned_cols=136 Identities=19% Similarity=0.202 Sum_probs=89.5
Q ss_pred eeeeecCceEEEEEEEC-CceEEEEEeChhhHHH-------------------------------------------HHH
Q 046083 496 NKIGQGGFGAVFYAELR-GEKAAIKKMDMQASKE-------------------------------------------FLA 531 (790)
Q Consensus 496 ~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~~~~~-------------------------------------------~~~ 531 (790)
+-|+.++-|.||+|+++ |+.||||+.++.-.+. +..
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 78999999999999998 9999999876432221 333
Q ss_pred HHHHHHhcC----CCCCcceEEEEe--cCeEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHH-HHHHHhCCC
Q 046083 532 ELKVLTHVH----HLNLVRLIGYCV--EGSLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARG-LEYIHEHTV 604 (790)
Q Consensus 532 E~~~l~~l~----h~niv~l~g~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~-L~~LH~~~~ 604 (790)
|..-+.+++ +..-+.+=.++. .+...|+|||++|-.+.+...... ..++.+. ++..++++ +..+-..+.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~k~---ia~~~~~~f~~q~~~dgf 286 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS-AGIDRKE---LAELLVRAFLRQLLRDGF 286 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh-cCCCHHH---HHHHHHHHHHHHHHhcCc
Confidence 444444442 111122222332 355789999999999998743221 2344333 33333332 333334565
Q ss_pred CceeecCCCCCCEEecCCCcEEEEEeCCCccccc
Q 046083 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTEV 638 (790)
Q Consensus 605 ~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~ 638 (790)
.|.|..|.||+++.++++.+.|||+....+.
T Consensus 287 ---fHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 287 ---FHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---cccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 9999999999999999999999999876543
No 482
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.89 E-value=9.8e-05 Score=70.42 Aligned_cols=128 Identities=17% Similarity=0.247 Sum_probs=93.5
Q ss_pred cceeeeecCceEEEEEEECCceEEEEEeChh-hHHHHHHHHHHHHhcCCCCCcceEEEEecCeEEEEEEEecCCChhhhh
Q 046083 494 MGNKIGQGGFGAVFYAELRGEKAAIKKMDMQ-ASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLNQHL 572 (790)
Q Consensus 494 ~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~-~~~~~~~E~~~l~~l~h~niv~l~g~~~~~~~~lv~e~~~~g~L~~~l 572 (790)
..+.|++|++|.||.+.+.|..+|+|.-..+ ....+..|.++|..+.-.++-+=+-++. ..++.|||++|-+|.++-
T Consensus 26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg--~~~i~me~i~G~~L~~~~ 103 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYG--EDFIRMEYIDGRPLGKLE 103 (201)
T ss_pred hhhhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEec--hhhhhhhhhcCcchhhhh
Confidence 4678999999999999999999999987654 4567999999999998777765433332 234559999998887655
Q ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCC-CCCEEecCCCcEEEEEeCCCcc
Q 046083 573 RGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIK-PANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 573 ~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlk-p~NILl~~~~~~kl~DfGla~~ 635 (790)
... + .+-...+++.-.-|...|+ -|+.|+ |...+|..+..+.|+||..|..
T Consensus 104 ~~~-----~----rk~l~~vlE~a~~LD~~GI---~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 104 IGG-----D----RKHLLRVLEKAYKLDRLGI---EHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hcc-----c----HHHHHHHHHHHHHHHHhcc---chhhhcCCceeEEecCCcEEEEEccchhh
Confidence 432 1 2334556666666777787 888887 4444444555899999999873
No 483
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.87 E-value=7.1e-05 Score=74.10 Aligned_cols=102 Identities=25% Similarity=0.328 Sum_probs=82.6
Q ss_pred HHHHHHHHhcCC-CCCcceEEEEecCeEEEEEEEecCCChhhh---hhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Q 046083 530 LAELKVLTHVHH-LNLVRLIGYCVEGSLFLVYEYIENGNLNQH---LRGSGKDTLTWSARMQIALDSARGLEYIHEHTVP 605 (790)
Q Consensus 530 ~~E~~~l~~l~h-~niv~l~g~~~~~~~~lv~e~~~~g~L~~~---l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~ 605 (790)
..|.-+++.+++ +++.+++|+|. .+++.||...+++... +.. -...+|..|.+|+.++++.+.+|++....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG---~~~v~E~~~~~~~~~~~~~l~~--~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG---RFYVVEYVGAGSLYGIYRPLSQ--FLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC---CEEEEEeecCcccccccccccc--ccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 357888888876 69999999994 3679999987766432 111 12368999999999999999999997665
Q ss_pred ceeecCCCCCCEEecCCCcEEEEEeCCCccc
Q 046083 606 VYIHRDIKPANILIDKNFRAKVADFGLAKLT 636 (790)
Q Consensus 606 ~~vH~dlkp~NILl~~~~~~kl~DfGla~~~ 636 (790)
.+.-.|++++|+-+++++++|+.|.......
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 6788999999999999999999999887644
No 484
>PRK11198 LysM domain/BON superfamily protein; Provisional
Probab=97.86 E-value=1.7e-05 Score=75.01 Aligned_cols=49 Identities=18% Similarity=0.285 Sum_probs=39.2
Q ss_pred ceeEEeccCCchHHHHhhhcCCCChHHHHHHcc---CCCCCCCCCCcEEEEE
Q 046083 77 TFTYETQFGDTYEKVASFAFANLTTEDWVRRVN---IYEPTRIPDYAFINVT 125 (790)
Q Consensus 77 ~~~Y~V~~GDTl~~IA~~~~~~~~t~~~l~~~N---~~~~~~l~~Gq~l~iP 125 (790)
...|+|++|||||+||.++|+.-.....|.+.| +.+++.|++||+|.||
T Consensus 95 ~~~y~Vk~GDTL~~IA~~~~g~~~~~~~I~~~N~~~l~~~~~I~pGq~L~IP 146 (147)
T PRK11198 95 SQFYTVKSGDTLSAIAKKVYGNANKYNKIFEANKPMLKSPDKIYPGQVLRIP 146 (147)
T ss_pred CeEEEECCCCCHHHHHHHHcCChhhHHHHHHhhhhcCCCcCCcCcCCEEecC
Confidence 357999999999999955455434566788888 3578899999999998
No 485
>PRK11198 LysM domain/BON superfamily protein; Provisional
Probab=97.84 E-value=2e-05 Score=74.44 Aligned_cols=48 Identities=23% Similarity=0.319 Sum_probs=38.7
Q ss_pred EEEEeccCchHHHHHHHhhcccccHHHHHhcCC--CC-CCCCCCCCcEEEEe
Q 046083 285 FSYKVKSGNTYKRIAELIYANLTTLDWLKSSNA--YD-ENHTPDVSSSVNVI 333 (790)
Q Consensus 285 ~~y~V~~gDtl~~IA~~~~~~l~~~~~l~~~N~--~~-~~~~~~~Gq~l~ip 333 (790)
..|+|++|||||+||++++..-..++.|.++|+ +. ++.+.+ ||+|.||
T Consensus 96 ~~y~Vk~GDTL~~IA~~~~g~~~~~~~I~~~N~~~l~~~~~I~p-Gq~L~IP 146 (147)
T PRK11198 96 QFYTVKSGDTLSAIAKKVYGNANKYNKIFEANKPMLKSPDKIYP-GQVLRIP 146 (147)
T ss_pred eEEEECCCCCHHHHHHHHcCChhhHHHHHHhhhhcCCCcCCcCc-CCEEecC
Confidence 369999999999999776665456789999997 44 455666 9999998
No 486
>smart00257 LysM Lysin motif.
Probab=97.79 E-value=3.3e-05 Score=55.80 Aligned_cols=44 Identities=23% Similarity=0.520 Sum_probs=38.1
Q ss_pred eeecCCCCCHHHHHHHcCCChhhHhhcCCCCCCcccccCCceEEe
Q 046083 225 SYYLWKGANLTFISKVFDTSIKYILSFNPQITNKDKILAGTRINV 269 (790)
Q Consensus 225 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~N~~~~~~~~l~~gq~l~i 269 (790)
.|++++|||++.||++|+++..+|.++|+.. ....+.+|+.|.|
T Consensus 1 ~~~v~~gdt~~~ia~~~~~~~~~~~~~N~~~-~~~~~~~g~~l~i 44 (44)
T smart00257 1 TYTVKKGDTLSSIARRYGISVSDLLELNNIL-DPDNLQVGQKLKI 44 (44)
T ss_pred CeEeCCCCCHHHHHHHhCCCHHHHHHHcCCC-CccccCCCCEEeC
Confidence 3889999999999999999999999999533 5567999998864
No 487
>smart00257 LysM Lysin motif.
Probab=97.78 E-value=3.8e-05 Score=55.49 Aligned_cols=44 Identities=18% Similarity=0.410 Sum_probs=38.2
Q ss_pred hcccCCCCCHHHHHHHhCCCHHHHHhhCCCCCCCCCcCCCCeEEe
Q 046083 18 SYYVWEGSNPTYISNIFGEDIAQILLYNPNIPNQNTIPSDTRISI 62 (790)
Q Consensus 18 ~y~v~~gdtl~~Ia~~~~~~~~~l~~~Np~~~~~~~~~~g~~l~i 62 (790)
.|+|++|||++.||++|+++..+|+++|+.. ....+.+|+.|.|
T Consensus 1 ~~~v~~gdt~~~ia~~~~~~~~~~~~~N~~~-~~~~~~~g~~l~i 44 (44)
T smart00257 1 TYTVKKGDTLSSIARRYGISVSDLLELNNIL-DPDNLQVGQKLKI 44 (44)
T ss_pred CeEeCCCCCHHHHHHHhCCCHHHHHHHcCCC-CccccCCCCEEeC
Confidence 4899999999999999999999999999744 4467889988864
No 488
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.73 E-value=4.1e-06 Score=93.36 Aligned_cols=184 Identities=16% Similarity=0.106 Sum_probs=128.2
Q ss_pred CcccceeeeecCceEEEEEEEC-CceEEEEEeChhhHHHHHHHHHHHHhcCCCC-CcceEEEEe-cCeEEEEEEEecCC-
Q 046083 491 DFSMGNKIGQGGFGAVFYAELR-GEKAAIKKMDMQASKEFLAELKVLTHVHHLN-LVRLIGYCV-EGSLFLVYEYIENG- 566 (790)
Q Consensus 491 ~f~~~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~g~~~-~~~~~lv~e~~~~g- 566 (790)
-+..-+..++++++.+||.+-. .+...++.+... ....-++++|.+++||| .+..++-+. +...++.++++..+
T Consensus 243 ws~~fh~fvK~altknpKkRptaeklL~h~fvs~~--l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~r 320 (829)
T KOG0576|consen 243 WSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT--LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGR 320 (829)
T ss_pred chHHHHHHHHHHhcCCCccCCChhhheeceeeccc--hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCc
Confidence 3444567789999999998765 233335554433 44556899999999999 444444333 34478899999876
Q ss_pred ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecCCCcEEEEEeCCCcccccCCcccccc
Q 046083 567 NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRAKVADFGLAKLTEVGSASVHTR 646 (790)
Q Consensus 567 ~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 646 (790)
+-....... ...+...+...+.+.-.+++++||+.-. +|+| |||..+ +..|..||+.+..+.... ....
T Consensus 321 s~~~~~~~s-e~~~~~~~~~~~~r~et~~l~~l~~~~~---~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~t 389 (829)
T KOG0576|consen 321 SSALEMTVS-EIALEQYQFAYPLRKETRPLAELHSSYK---VHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPRT 389 (829)
T ss_pred cccccCChh-hHhhhhhhhhhhhhhhcccccccccccc---cCcc----cccccc-cccccccccCCcccCccc--cccc
Confidence 222211111 1123444455666777889999999865 8999 777665 578999999987665332 2344
Q ss_pred cccCCCccchhcccCCCCCchhhHHHHHHHHHHHHhCCccc
Q 046083 647 LVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAMEAV 687 (790)
Q Consensus 647 ~~gt~~y~aPE~~~~~~~s~~sDvwS~Gvvl~elltG~~p~ 687 (790)
..+++.|+|||+.....+..+.|+|+.|+--.+|--|-+|-
T Consensus 390 ~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 390 AIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred CCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 67899999999999999999999999998777776665554
No 489
>PLN02876 acyl-CoA dehydrogenase
Probab=97.73 E-value=0.00048 Score=84.14 Aligned_cols=74 Identities=20% Similarity=0.427 Sum_probs=56.3
Q ss_pred ceeeeecCceEEEEEEECC----ceEEEEEeChh----hHHHHHHHHHHHHhcC-CCCC--cceEEEEec----CeEEEE
Q 046083 495 GNKIGQGGFGAVFYAELRG----EKAAIKKMDMQ----ASKEFLAELKVLTHVH-HLNL--VRLIGYCVE----GSLFLV 559 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~g----~~vavK~~~~~----~~~~~~~E~~~l~~l~-h~ni--v~l~g~~~~----~~~~lv 559 (790)
.+.++.|.+..+|+....+ ..+++|+.... ....+.+|.++|+.+. |.++ .+++.+|.+ +..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 5788999999999987763 46788876432 3356889999999995 6654 777888765 357999
Q ss_pred EEEecCCCh
Q 046083 560 YEYIENGNL 568 (790)
Q Consensus 560 ~e~~~~g~L 568 (790)
|||++|..+
T Consensus 123 ME~v~G~~~ 131 (822)
T PLN02876 123 MEYLEGRIF 131 (822)
T ss_pred EEecCCccc
Confidence 999998653
No 490
>PRK10593 hypothetical protein; Provisional
Probab=97.72 E-value=0.00058 Score=73.04 Aligned_cols=76 Identities=12% Similarity=0.042 Sum_probs=59.4
Q ss_pred ccceeeeecCceEEEEEEECCceEEEEEeChh-hHHHHHHHHHHHHhcCC---CCCcceEEEEec----CeEEEEEEEec
Q 046083 493 SMGNKIGQGGFGAVFYAELRGEKAAIKKMDMQ-ASKEFLAELKVLTHVHH---LNLVRLIGYCVE----GSLFLVYEYIE 564 (790)
Q Consensus 493 ~~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~-~~~~~~~E~~~l~~l~h---~niv~l~g~~~~----~~~~lv~e~~~ 564 (790)
.-.+.||.|..+.||+....+..+.+|..+.. ....+..|.+.|+.+.. ..+.+.+++|.. +..++|||+++
T Consensus 17 ~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~ 96 (297)
T PRK10593 17 SRVECISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR 96 (297)
T ss_pred heeeecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence 34678999999999999877667777876542 45689999999999853 467888888753 44899999999
Q ss_pred CCCh
Q 046083 565 NGNL 568 (790)
Q Consensus 565 ~g~L 568 (790)
++++
T Consensus 97 G~~~ 100 (297)
T PRK10593 97 GVSV 100 (297)
T ss_pred CEec
Confidence 8765
No 491
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.71 E-value=0.00087 Score=67.75 Aligned_cols=148 Identities=19% Similarity=0.242 Sum_probs=96.4
Q ss_pred cCHHHHHHHhcCcccceee---eecCceEEEEEEEC-CceEEEEEeChhhH----------------------HH-----
Q 046083 480 FSYEELAKATNDFSMGNKI---GQGGFGAVFYAELR-GEKAAIKKMDMQAS----------------------KE----- 528 (790)
Q Consensus 480 ~~~~~l~~~~~~f~~~~~l---G~G~fg~Vy~a~~~-g~~vavK~~~~~~~----------------------~~----- 528 (790)
.+.+.+....++..+.... ..|.-+.||+|... +..+|+|+.+.... ++
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 3455555555555555554 46777789999875 88999998753111 00
Q ss_pred HHHHHHHHHhcC--CCCCcceEEEEecCeEEEEEEEecCCCh-hhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHh-CCC
Q 046083 529 FLAELKVLTHVH--HLNLVRLIGYCVEGSLFLVYEYIENGNL-NQHLRGSGKDTLTWSARMQIALDSARGLEYIHE-HTV 604 (790)
Q Consensus 529 ~~~E~~~l~~l~--h~niv~l~g~~~~~~~~lv~e~~~~g~L-~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~-~~~ 604 (790)
...|..-|.++. +-.+.+.+++. +-.|||||+....+ .-.|..- ++.......+..++++.+.-|-. .+.
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~~---~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a~L 188 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAFR---NNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEAGL 188 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceeec---CCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhcCc
Confidence 245677777763 44444555443 23789999965311 1111111 12222466677788888888877 676
Q ss_pred CceeecCCCCCCEEecCCCcEEEEEeCCCcccc
Q 046083 605 PVYIHRDIKPANILIDKNFRAKVADFGLAKLTE 637 (790)
Q Consensus 605 ~~~vH~dlkp~NILl~~~~~~kl~DfGla~~~~ 637 (790)
||+||+.=|||+. ++.+.|+|||-|....
T Consensus 189 ---VHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 189 ---VHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred ---ccccchhhheEEE-CCeEEEEECccccccC
Confidence 9999999999999 7899999999887544
No 492
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.58 E-value=0.00057 Score=70.49 Aligned_cols=71 Identities=15% Similarity=0.236 Sum_probs=46.6
Q ss_pred eeeeecCce-EEEEEEECCceEEEEEeChh-hHHHHHHHHHHHHhcCCC---CCcceEEEEec----CeEEEEEEEecCC
Q 046083 496 NKIGQGGFG-AVFYAELRGEKAAIKKMDMQ-ASKEFLAELKVLTHVHHL---NLVRLIGYCVE----GSLFLVYEYIENG 566 (790)
Q Consensus 496 ~~lG~G~fg-~Vy~a~~~g~~vavK~~~~~-~~~~~~~E~~~l~~l~h~---niv~l~g~~~~----~~~~lv~e~~~~g 566 (790)
+.|+.|+.. .||+. +..+++|..+.. ....+.+|.+++..+... -+...++.... +..+++||+++|.
T Consensus 3 ~~~~~gG~~n~vy~~---~~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~ 79 (235)
T cd05155 3 EPVDSGGTDNATFRL---GDDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGE 79 (235)
T ss_pred eeccCCCcccceEEc---CCceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCC
Confidence 567777776 58875 346777876543 345788999999888532 33444444332 1248899999997
Q ss_pred Chh
Q 046083 567 NLN 569 (790)
Q Consensus 567 ~L~ 569 (790)
++.
T Consensus 80 ~l~ 82 (235)
T cd05155 80 TAT 82 (235)
T ss_pred CCC
Confidence 764
No 493
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.58 E-value=0.00066 Score=67.05 Aligned_cols=121 Identities=24% Similarity=0.421 Sum_probs=90.1
Q ss_pred cCcccceeeeecCc-eEEEEEEECCceEEEEEeCh------------------------hhHHHHHHHHHHHHhcC---C
Q 046083 490 NDFSMGNKIGQGGF-GAVFYAELRGEKAAIKKMDM------------------------QASKEFLAELKVLTHVH---H 541 (790)
Q Consensus 490 ~~f~~~~~lG~G~f-g~Vy~a~~~g~~vavK~~~~------------------------~~~~~~~~E~~~l~~l~---h 541 (790)
.+++..+.||.|.. |.||+++..|..+|+|.+.. .....|..|.+.+.+++ +
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~ 116 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR 116 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence 78899999999999 99999999999999999321 01124788998888884 4
Q ss_pred CCC--cceEEEEe-c--C----------------eEEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 046083 542 LNL--VRLIGYCV-E--G----------------SLFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIH 600 (790)
Q Consensus 542 ~ni--v~l~g~~~-~--~----------------~~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH 600 (790)
.++ |+.+||.. . . ..-+|.||++... .+. .+-+.++.+-+..+|
T Consensus 117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~----~~~~~~~~~dl~~~~ 181 (207)
T PF13095_consen 117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQ----IRDIPQMLRDLKILH 181 (207)
T ss_pred cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccc----hhHHHHHHHHHHHHH
Confidence 466 89999863 1 0 0356777776532 122 233456777888999
Q ss_pred hCCCCceeecCCCCCCEEecCCCcEEEEEeCCC
Q 046083 601 EHTVPVYIHRDIKPANILIDKNFRAKVADFGLA 633 (790)
Q Consensus 601 ~~~~~~~vH~dlkp~NILl~~~~~~kl~DfGla 633 (790)
..++ +-+|+++.|.. .-||+|||.+
T Consensus 182 k~gI---~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 182 KLGI---VPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HCCe---eeccCcccccc-----CCEEEecccC
Confidence 9998 99999999986 3589999964
No 494
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.47 E-value=0.0009 Score=69.99 Aligned_cols=134 Identities=18% Similarity=0.174 Sum_probs=79.5
Q ss_pred eeecCceEEEEEEECCceEEEEEeChhhH---HHHHHHHHHHHhcCCCCCc-ceEEEEecCeEEEEEEEecCCChhhh--
Q 046083 498 IGQGGFGAVFYAELRGEKAAIKKMDMQAS---KEFLAELKVLTHVHHLNLV-RLIGYCVEGSLFLVYEYIENGNLNQH-- 571 (790)
Q Consensus 498 lG~G~fg~Vy~a~~~g~~vavK~~~~~~~---~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~lv~e~~~~g~L~~~-- 571 (790)
+..|-...+|+....+..+++|....... -+..+|.++++.+....++ +++.++ + -++||||++|..+...
T Consensus 4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~-~--~~~v~e~i~G~~~~~~~~ 80 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN-E--HWLLVEWLEGEVITLDQF 80 (256)
T ss_pred CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe-C--CEEEEEeccCcccccccc
Confidence 44577788999987788899987653321 1457899999988654443 334433 2 3689999998765421
Q ss_pred ---------------hhcCC--CCCCCHHHH-HHHHHH---------HHHHHHHHHhCC-----CCceeecCCCCCCEEe
Q 046083 572 ---------------LRGSG--KDTLTWSAR-MQIALD---------SARGLEYIHEHT-----VPVYIHRDIKPANILI 619 (790)
Q Consensus 572 ---------------l~~~~--~~~l~~~~~-~~i~~~---------ia~~L~~LH~~~-----~~~~vH~dlkp~NILl 619 (790)
||... ..+++.... .+...+ +...+..+-... -+.++|+|+.|.||++
T Consensus 81 ~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~ 160 (256)
T TIGR02721 81 VALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVV 160 (256)
T ss_pred cCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEE
Confidence 11111 112222211 111111 111122222211 1247999999999999
Q ss_pred cCCCcEEEEEeCCCcc
Q 046083 620 DKNFRAKVADFGLAKL 635 (790)
Q Consensus 620 ~~~~~~kl~DfGla~~ 635 (790)
++++ +.|+||..+..
T Consensus 161 ~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 161 TPQG-LKLIDWEYASD 175 (256)
T ss_pred eCCC-CEEEeccccCc
Confidence 9877 78999998864
No 495
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.43 E-value=0.0042 Score=61.84 Aligned_cols=129 Identities=23% Similarity=0.307 Sum_probs=90.2
Q ss_pred cceeeeecCceEEEEEEECCceEEEEEeChhh-------------------HHHHHHHHHHHHhcC------CCCCcceE
Q 046083 494 MGNKIGQGGFGAVFYAELRGEKAAIKKMDMQA-------------------SKEFLAELKVLTHVH------HLNLVRLI 548 (790)
Q Consensus 494 ~~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~-------------------~~~~~~E~~~l~~l~------h~niv~l~ 548 (790)
-...||+|+.=.||.--. +....||+..... .++..+|+..+..+. +.+|.+++
T Consensus 5 ~~~~i~~G~~R~cy~HP~-dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQHPD-DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CCcccccCCCceEEECCC-CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 356899999998985322 3445677776554 567888888877776 78899999
Q ss_pred EEEec-CeEEEEEEEecCC------ChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCCCCCEEecC
Q 046083 549 GYCVE-GSLFLVYEYIENG------NLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDK 621 (790)
Q Consensus 549 g~~~~-~~~~lv~e~~~~g------~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~~~~~~vH~dlkp~NILl~~ 621 (790)
|+... ...-+|+|.+.+. +|.+++... .++. .. ...+-+-..||-++++ +.+|++|+||++..
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~---~~~~-~~---~~~L~~f~~~l~~~~I---v~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEG---GLTE-EL---RQALDEFKRYLLDHHI---VIRDLNPHNIVVQR 153 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcC---CccH-HH---HHHHHHHHHHHHHcCC---eecCCCcccEEEEe
Confidence 99874 4578899888642 577788543 2444 32 3334455678888898 99999999999954
Q ss_pred CC----cEEEEE-eCCC
Q 046083 622 NF----RAKVAD-FGLA 633 (790)
Q Consensus 622 ~~----~~kl~D-fGla 633 (790)
+. .+.|+| ||..
T Consensus 154 ~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 154 RDSGEFRLVLIDGLGEK 170 (199)
T ss_pred cCCCceEEEEEeCCCCc
Confidence 32 566776 4543
No 496
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.35 E-value=0.0032 Score=64.81 Aligned_cols=72 Identities=14% Similarity=0.183 Sum_probs=48.0
Q ss_pred ceeeeecCceEEEEEEEC---CceEEEEEeChhhH--HHHHHHHHHHHhcCCCCCc-ceEEEEecCeEEEEEEEecCCCh
Q 046083 495 GNKIGQGGFGAVFYAELR---GEKAAIKKMDMQAS--KEFLAELKVLTHVHHLNLV-RLIGYCVEGSLFLVYEYIENGNL 568 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~---g~~vavK~~~~~~~--~~~~~E~~~l~~l~h~niv-~l~g~~~~~~~~lv~e~~~~g~L 568 (790)
.+.|..|-...+|+.... ++.+++|....... -+..+|+.++..+....++ ++++.+. + .++|||++|.++
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~-~--~~l~e~i~G~~l 79 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ-N--GLIYEFIPGRTL 79 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC-C--cEEEEeeCCCcC
Confidence 356777888899998876 46788887754322 2335788889888544444 4444332 2 479999998776
Q ss_pred h
Q 046083 569 N 569 (790)
Q Consensus 569 ~ 569 (790)
.
T Consensus 80 ~ 80 (235)
T cd05157 80 E 80 (235)
T ss_pred C
Confidence 3
No 497
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.33 E-value=0.00069 Score=81.08 Aligned_cols=198 Identities=18% Similarity=0.171 Sum_probs=138.0
Q ss_pred HHHHHHHHHHhcCCCCCcceEEEEecCe-----EEEEEEEecCCChhhhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 046083 528 EFLAELKVLTHVHHLNLVRLIGYCVEGS-----LFLVYEYIENGNLNQHLRGSGKDTLTWSARMQIALDSARGLEYIHEH 602 (790)
Q Consensus 528 ~~~~E~~~l~~l~h~niv~l~g~~~~~~-----~~lv~e~~~~g~L~~~l~~~~~~~l~~~~~~~i~~~ia~~L~~LH~~ 602 (790)
...-|.+.+.++.|+|++.++.|..+.. ..+..|++..-++...+...+ ..+....+.+..++.+||.|+|+.
T Consensus 228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~--~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG--SIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc--ccCHHHHHHHHHHHhhhHHHHHHh
Confidence 3456778888999999999999876431 345678888888888887654 477788888899999999999998
Q ss_pred CCCceeecCCCCC---CEEecCCCcEEEE--EeCCCcccccCCcccccccccCCCccchhcccCCCCCc--hhhHHHHHH
Q 046083 603 TVPVYIHRDIKPA---NILIDKNFRAKVA--DFGLAKLTEVGSASVHTRLVGTFGYMPPEYAQYGEVSP--KIDVYAFGV 675 (790)
Q Consensus 603 ~~~~~vH~dlkp~---NILl~~~~~~kl~--DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~s~--~sDvwS~Gv 675 (790)
.. .|.-+..+ +...+..+...++ ||+..+........ ....-+..+-++|.......+. ..|+|.+|.
T Consensus 306 ~l---~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~--~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgl 380 (1351)
T KOG1035|consen 306 SL---EHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS--FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGL 380 (1351)
T ss_pred cc---ceeEEecccccccccCccceeecchhhhcccccCCCcccc--hhhcCccccccccccccccchhhhhhHHHHHHH
Confidence 76 66666655 4455666677777 88888765433222 1223455678888877655544 479999999
Q ss_pred HHHHHHhCCccccccccccccccchHHHHHHHHcCCCChhhhhhhcCCcCCCCCCHHHHHHHHHHHHHccccCCCCCCCH
Q 046083 676 VLYELISAMEAVVKTNETITESTGLVALFEEVLRQPDPREDLQRLVDPRLGDDYPIDSVRKMARLARACTQENPQLRPSM 755 (790)
Q Consensus 676 vl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~l~~~~~~~~~~~l~~li~~Cl~~dP~~RPt~ 755 (790)
.+..+..|..+-..... ...+++. .+. ..+.+....|+..++++|++.
T Consensus 381 l~~~~~~~~~i~~~~~~------------------------~~~~l~~----~~~----~~~~d~~~~~~~~~~~~Rl~~ 428 (1351)
T KOG1035|consen 381 LLLQLSQGEDISEKSAV------------------------PVSLLDV----LST----SELLDALPKCLDEDSEERLSA 428 (1351)
T ss_pred HHhhhhhcCcccccccc------------------------hhhhhcc----ccc----hhhhhhhhhhcchhhhhccch
Confidence 99999987544321110 0011110 001 146678899999999999999
Q ss_pred HHHHHHHHh
Q 046083 756 RAIVVALMT 764 (790)
Q Consensus 756 ~evl~~L~~ 764 (790)
.+++.+...
T Consensus 429 ~~ll~~~f~ 437 (1351)
T KOG1035|consen 429 LELLTHPFL 437 (1351)
T ss_pred hhhhhchhc
Confidence 999887654
No 498
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.23 E-value=0.0022 Score=68.66 Aligned_cols=141 Identities=19% Similarity=0.215 Sum_probs=88.5
Q ss_pred ceeeeecCceEEEEEEECCceEEEEEeChhhHHHHHHHHHHHHhcCCCC--CcceEEE-------EecCeEEEEEEEecC
Q 046083 495 GNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVHHLN--LVRLIGY-------CVEGSLFLVYEYIEN 565 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~g~-------~~~~~~~lv~e~~~~ 565 (790)
.+.|..|....+|+....+..+++|.......+....|++++..+.+.. +.+.+.. ..++..++|++|++|
T Consensus 19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G 98 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSGRYVLTLFEKVSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLAG 98 (296)
T ss_pred eecccCccccceEEEEeCCCcEEEEEcCCCChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCCC
Confidence 5567777778999998887889999887655566778888888885332 4444431 123456899999998
Q ss_pred CChhh----h----------hhcC--C--C-----CCCCHHHHHH----------HHHHHHHHHHHHHhC---CC-Ccee
Q 046083 566 GNLNQ----H----------LRGS--G--K-----DTLTWSARMQ----------IALDSARGLEYIHEH---TV-PVYI 608 (790)
Q Consensus 566 g~L~~----~----------l~~~--~--~-----~~l~~~~~~~----------i~~~ia~~L~~LH~~---~~-~~~v 608 (790)
..+.. . +|.. . . ....|..... ....+..++.++... .. ..++
T Consensus 99 ~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 178 (296)
T cd05153 99 EHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRGVI 178 (296)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCcCC
Confidence 76532 0 1110 0 0 1123322210 111233445555531 11 2369
Q ss_pred ecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 609 HRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 609 H~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
|+|+.|.|+|++++..+.|.||+.+..
T Consensus 179 HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 179 HADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred ccCcCcccEEEeCCceEEEeehhhhcC
Confidence 999999999999987778999998763
No 499
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.23 E-value=0.0022 Score=72.74 Aligned_cols=134 Identities=22% Similarity=0.290 Sum_probs=85.8
Q ss_pred ceeeeecCceEEEEEEEC-CceEEEEEeChhhH----------------------------------H------HHHHHH
Q 046083 495 GNKIGQGGFGAVFYAELR-GEKAAIKKMDMQAS----------------------------------K------EFLAEL 533 (790)
Q Consensus 495 ~~~lG~G~fg~Vy~a~~~-g~~vavK~~~~~~~----------------------------------~------~~~~E~ 533 (790)
.+.||.-+.|.||+|+++ |+.||||+-++.-. + +|..|.
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 468999999999999998 88899998653211 1 134444
Q ss_pred HHHHhc----CCCCCcc---eEEEEe--cCeEEEEEEEecCCChhhh--hhcCCCCCCCHHHHHHHHHHHHHHHHH-HHh
Q 046083 534 KVLTHV----HHLNLVR---LIGYCV--EGSLFLVYEYIENGNLNQH--LRGSGKDTLTWSARMQIALDSARGLEY-IHE 601 (790)
Q Consensus 534 ~~l~~l----~h~niv~---l~g~~~--~~~~~lv~e~~~~g~L~~~--l~~~~~~~l~~~~~~~i~~~ia~~L~~-LH~ 601 (790)
+-..++ +|-++.. +=.++. .....|+||||+|..+.+. |.+.+ ++-. .++..+.++... +=.
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~---~i~~~l~~~~~~qIf~ 319 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKRG---ISPH---DILNKLVEAYLEQIFK 319 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHcC---CCHH---HHHHHHHHHHHHHHHh
Confidence 433333 3444211 212222 3457999999999887764 44433 3333 334444443222 223
Q ss_pred CCCCceeecCCCCCCEEecC----CCcEEEEEeCCCcccc
Q 046083 602 HTVPVYIHRDIKPANILIDK----NFRAKVADFGLAKLTE 637 (790)
Q Consensus 602 ~~~~~~vH~dlkp~NILl~~----~~~~kl~DfGla~~~~ 637 (790)
.|. +|+|=.|.||+++. ++++.+-|||+.....
T Consensus 320 ~Gf---fHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 320 TGF---FHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred cCC---ccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 444 99999999999983 6789999999987654
No 500
>PRK05231 homoserine kinase; Provisional
Probab=97.00 E-value=0.015 Score=62.92 Aligned_cols=155 Identities=16% Similarity=0.172 Sum_probs=84.7
Q ss_pred CHHHHHHHhcCccc-----ceeeeecCceEEEEEEECCceEEEEEeChhhHHHHHHHHHHHHhcCCC--CCcceEEE---
Q 046083 481 SYEELAKATNDFSM-----GNKIGQGGFGAVFYAELRGEKAAIKKMDMQASKEFLAELKVLTHVHHL--NLVRLIGY--- 550 (790)
Q Consensus 481 ~~~~l~~~~~~f~~-----~~~lG~G~fg~Vy~a~~~g~~vavK~~~~~~~~~~~~E~~~l~~l~h~--niv~l~g~--- 550 (790)
+.+++......|.+ .+.|+.|....+|+....+..+++|+......+....|+.++..+... .+.+.+..
T Consensus 8 s~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G 87 (319)
T PRK05231 8 SDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQGEYVLTLFERLTAEDLPFFLGLMQHLAARGVPVPAPVARRDG 87 (319)
T ss_pred CHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCCcEEEEEeccCChHHhHHHHHHHHHHHHCCCCCCcceeCCCC
Confidence 34444443344433 345666777789999887778999988633344555566666666322 23333321
Q ss_pred ----EecCeEEEEEEEecCCChhh-----------hh---hcCC---------CCCCCH-HHHHHHH------------H
Q 046083 551 ----CVEGSLFLVYEYIENGNLNQ-----------HL---RGSG---------KDTLTW-SARMQIA------------L 590 (790)
Q Consensus 551 ----~~~~~~~lv~e~~~~g~L~~-----------~l---~~~~---------~~~l~~-~~~~~i~------------~ 590 (790)
...+..++++||++|..+.. .| |... ...+.| .....-. .
T Consensus 88 ~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 167 (319)
T PRK05231 88 AALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLE 167 (319)
T ss_pred CEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHH
Confidence 12455789999999875421 11 1100 001112 2211111 1
Q ss_pred H-HHHHHHHHHhC----CCCceeecCCCCCCEEecCCCcEEEEEeCCCcc
Q 046083 591 D-SARGLEYIHEH----TVPVYIHRDIKPANILIDKNFRAKVADFGLAKL 635 (790)
Q Consensus 591 ~-ia~~L~~LH~~----~~~~~vH~dlkp~NILl~~~~~~kl~DfGla~~ 635 (790)
+ +...+..+... --..+||+|+.+.|||++.+...-|+||+.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 168 AELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred HHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 1 11122333211 112369999999999999776568999998763
Done!