BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046084
(363 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 154/284 (54%), Gaps = 21/284 (7%)
Query: 78 RITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTE 137
R + +E+ VA+++F K +G GG+G VY+ +L G VA+K+L + L+ FQTE
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ-FQTE 85
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR-LDWTKRVNIV 196
++S HRN+++L GFC+ L+Y YM GS+ LR E+ LDW KR I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL-HSDSSNRTVVAG 255
A L+YLH C P I+HRD+ + NILL+ + EA V DFG+A+L+ + D V G
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 205
Query: 256 THGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVN-PKIMLID------- 307
T G+IAPE T +EK DV+ +GV+ LE++ G+ DL N +ML+D
Sbjct: 206 TIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 265
Query: 308 ------LLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
L+D + D+ V Q I ++ C +S P RP
Sbjct: 266 EKKLEALVDVDLQGNYKDEEVEQLI----QVALLCTQSSPMERP 305
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/284 (36%), Positives = 154/284 (54%), Gaps = 21/284 (7%)
Query: 78 RITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTE 137
R + +E+ VA+++F K +G GG+G VY+ +L G VA+K+L T+ L+ FQTE
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ-FQTE 77
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR-LDWTKRVNIV 196
++S HRN+++L GFC+ L+Y YM GS+ LR E+ LDW KR I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL-HSDSSNRTVVAG 255
A L+YLH C P I+HRD+ + NILL+ + EA V DFG+A+L+ + D V G
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRG 197
Query: 256 THGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVN-PKIMLID------- 307
G+IAPE T +EK DV+ +GV+ LE++ G+ DL N +ML+D
Sbjct: 198 XIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257
Query: 308 ------LLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
L+D + D+ V Q I ++ C +S P RP
Sbjct: 258 EKKLEALVDVDLQGNYKDEEVEQLI----QVALLCTQSSPMERP 297
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/216 (41%), Positives = 119/216 (55%), Gaps = 8/216 (3%)
Query: 78 RITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTE 137
R+ ++ AT +FD K+ IG G +G VY+ L G KVALK+ ++ +E F+TE
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ--GIEEFETE 85
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDD-EAIRLDWTKRVNIV 196
LS RH ++V L GFC + M LIYKYM G+L L D + + W +R+ I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARL-LHSDSSN-RTVVA 254
A L YLH +I+HRD+ S NILL+ + DFG+++ D ++ VV
Sbjct: 146 IGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK 202
Query: 255 GTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGR 290
GT GYI PE LTEK DVYSFGVV EVL R
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 117/216 (54%), Gaps = 8/216 (3%)
Query: 78 RITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTE 137
R+ ++ AT +FD K+ IG G +G VY+ L G KVALK+ ++ +E F+TE
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQ--GIEEFETE 85
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDD-EAIRLDWTKRVNIV 196
LS RH ++V L GFC + M LIYKYM G+L L D + + W +R+ I
Sbjct: 86 IETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEIC 145
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR--LLHSDSSNRTVVA 254
A L YLH +I+HRD+ S NILL+ + DFG+++ + VV
Sbjct: 146 IGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK 202
Query: 255 GTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGR 290
GT GYI PE LTEK DVYSFGVV EVL R
Sbjct: 203 GTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 139/275 (50%), Gaps = 17/275 (6%)
Query: 75 YDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESF 134
+ G + +M + D +IK IG G +G+V+RA+ G VA+K L + + F
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEF 81
Query: 135 QTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
E ++ ++RH NIV G + ++ +Y+ RGSL+ +L +LD +R++
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+ +A ++YLH + P IVHRD+ S N+L++ K V DFG++RL S A
Sbjct: 142 MAYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAA 200
Query: 255 GTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPK--IMLIDLLDQR 312
GT ++APE+ EK DVYSFGV+ E+ + P ++NP + + +R
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP---WGNLNPAQVVAAVGFKCKR 257
Query: 313 --VPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+P ++ Q V+ I+ C ++P RP
Sbjct: 258 LEIPRNLNPQ--------VAAIIEGCWTNEPWKRP 284
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 140/275 (50%), Gaps = 17/275 (6%)
Query: 75 YDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESF 134
+ G + +M + D +IK IG G +G+V+RA+ G VA+K L + + F
Sbjct: 23 FQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEF 81
Query: 135 QTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
E ++ ++RH NIV G + ++ +Y+ RGSL+ +L +LD +R++
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLS 141
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+ +A ++YLH + P IVHR++ S N+L++ K V DFG++RL S + A
Sbjct: 142 MAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA 200
Query: 255 GTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPK--IMLIDLLDQR 312
GT ++APE+ EK DVYSFGV+ E+ + P ++NP + + +R
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP---WGNLNPAQVVAAVGFKCKR 257
Query: 313 --VPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+P ++ Q V+ I+ C ++P RP
Sbjct: 258 LEIPRNLNPQ--------VAAIIEGCWTNEPWKRP 284
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 136/266 (51%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y RG ++ L+ + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALS 127
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 235
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 236 EGARDLISRL----LKHNPSQRPMLR 257
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 10/208 (4%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 148
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 203
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ EK D++S GV+ E L+G+ P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 233
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 234 EGARDLISRL----LKHNPSQRPMLR 255
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 182
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 235
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 236 EGARDLISRL----LKHNPSQRPMLR 257
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 10/208 (4%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 139
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 194
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ EK D++S GV+ E L+G+ P
Sbjct: 195 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 177
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 234
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 235 D--LISRL----LKHNPSQRPMLR 252
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 126
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 181
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 238
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 239 D--LISRL----LKHNPSQRPMLR 256
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 121
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 176
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 177 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 233
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 234 D--LISRL----LKHNPSQRPMLR 251
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y RG ++ L+ + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQ---KLSKFDEQRTATYITELANALS 127
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLXGTLDYLPPEM 182
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 235
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 236 EGARDLISRL----LKHNPSQRPMLR 257
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 233
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 234 EGARDLISRL----LKHNPSQRPMLR 255
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 123
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + H+ SS RT ++GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--CHAPSSRRTTLSGTLDYLPPEM 178
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 235
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 236 D--LISRL----LKHNPSQRPMLR 253
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTXLCGTLDYLPPEM 177
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 234
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 235 D--LISRL----LKHNPSQRPMLR 252
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 116 bits (291), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 114/206 (55%), Gaps = 10/206 (4%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQIRH 146
EDFDI +G G +G+VY A+ K + ALK L ++ E A +E + E + S +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NI++LYG+ ++LI +Y G+++ R + R D + + +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSRFDEQRTATYITELANALSYC 128
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEMIE 183
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ EK D++S GV+ E L+G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTELCGTLDYLPPEM 177
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 230
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 231 EGARDLISRL----LKHNPSQRPMLR 252
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 140/264 (53%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 119
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEM 174
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 175 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 231
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 232 D--LISRL----LKHNPSQRPMLR 249
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 230
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 231 EGARDLISRL----LKHNPSQRPMLR 252
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 177
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 230
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 231 EGARDLISRL----LKHNPSQRPMLR 252
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 123
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 178
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 231
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 232 EGARDLISRL----LKHNPSQRPMLR 253
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE+
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTDLCGTLDYLPPEM 182
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 235
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 236 EGARDLISRL----LKHNPSQRPMLR 257
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 135/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ + K + ALK L ++ E A +E + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRI-------SRVEFTFPDFVT 230
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 231 EGARDLISRL----LKHNPSQRPMLR 252
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 140/264 (53%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 124
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +A+FG + +H+ SS RT + GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 179
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 236
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 237 D--LISRL----LKHNPSQRPMLR 254
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 140/264 (53%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +A+FG + +H+ SS RT + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFGWS--VHAPSSRRTTLCGTLDYLPPEM 180
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 237
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 238 D--LISRL----LKHNPSQRPMLR 255
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 139/264 (52%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 180
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 237
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 238 D--LISRL----LKHNPSQRPMLR 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 139/264 (52%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRAALCGTLDYLPPEM 177
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 234
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 235 D--LISRL----LKHNPSQRPMLR 252
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 139/264 (52%), Gaps = 19/264 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 124
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 179
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
+ EK D++S GV+ E L+G+ P + ++ I ++ P + + +
Sbjct: 180 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFPDFVTEGA--R 236
Query: 325 DIILVSKIVFACLRSKPTSRPMQR 348
D L+S++ L+ P+ RPM R
Sbjct: 237 D--LISRL----LKHNPSQRPMLR 254
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 123
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEM 178
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 179 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 231
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 232 EGARDLISRL----LKHNPSQRPMLR 253
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 114/208 (54%), Gaps = 10/208 (4%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 127
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS RT + GT Y+ PE
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRTTLCGTLDYLPPEX 182
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
EK D++S GV+ E L+G+ P
Sbjct: 183 IEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 122
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 177
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 178 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 230
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 231 EGARDLISRL----LKHNPSQRPMLR 252
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 115/208 (55%), Gaps = 10/208 (4%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 148
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 203
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ EK D++S GV+ E L+G+ P
Sbjct: 204 IEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRXXLCGTLDYLPPEM 180
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 233
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 234 EGARDLISRL----LKHNPSQRPMLR 255
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 113/206 (54%), Gaps = 10/206 (4%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQIRH 146
EDFDI +G G +G+VY A+ K + ALK L ++ E A +E + E + S +RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NI++LYG+ ++LI +Y G+++ R + R D + + +A+ALSY
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSRFDEQRTATYITELANALSYC 128
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFGWS--VHAPSSRRDTLCGTLDYLPPEMIE 183
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ EK D++S GV+ E L+G P
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPP 209
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 147/302 (48%), Gaps = 35/302 (11%)
Query: 80 TFQEMIVATEDFDIKYC------IGTGGYGSVYRAQLPSGKKVALKKLHH--SETELAFL 131
+F E+ T +FD + +G GG+G VY+ + + VA+KKL T
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 74
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
+ F E ++++ +H N+V+L GF + L+Y YM GSL L D L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251
R I + A+ +++LH + +HRDI S NILL+ A ++DFG+AR S+ +T
Sbjct: 135 RCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQT 189
Query: 252 V----VAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMG-------RHPGDLL---- 296
V + GT Y+APE A +T K D+YSFGVV LE++ G R P LL
Sbjct: 190 VMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248
Query: 297 SSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLVR 356
+ + + D +D+++ D T ++ + V+ CL K RP + Q+ L
Sbjct: 249 EIEDEEKTIEDYIDKKMNDA--DSTSVEAMYSVAS---QCLHEKKNKRPDIKKVQQLLQE 303
Query: 357 KT 358
T
Sbjct: 304 MT 305
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 147/302 (48%), Gaps = 35/302 (11%)
Query: 80 TFQEMIVATEDFDIKYC------IGTGGYGSVYRAQLPSGKKVALKKLHH--SETELAFL 131
+F E+ T +FD + +G GG+G VY+ + + VA+KKL T
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 74
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
+ F E ++++ +H N+V+L GF + L+Y YM GSL L D L W
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251
R I + A+ +++LH + +HRDI S NILL+ A ++DFG+AR S+ +T
Sbjct: 135 RCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQT 189
Query: 252 V----VAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMG-------RHPGDLL---- 296
V + GT Y+APE A +T K D+YSFGVV LE++ G R P LL
Sbjct: 190 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 248
Query: 297 SSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLVR 356
+ + + D +D+++ D T ++ + V+ CL K RP + Q+ L
Sbjct: 249 EIEDEEKTIEDYIDKKMNDA--DSTSVEAMYSVAS---QCLHEKKNKRPDIKKVQQLLQE 303
Query: 357 KT 358
T
Sbjct: 304 MT 305
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 113/213 (53%), Gaps = 17/213 (7%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETE--LAFLESFQTEAHLLSQIRHR 147
+ ++ IG GG+G VYRA G +VA+K H E +E+ + EA L + ++H
Sbjct: 8 ELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
NI+ L G CL + + L+ ++ R G L +L R+ VN +A ++YLH
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLH 122
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAF--------VADFGVARLLHSDSSNRTVVAGTHGY 259
+ I I+HRD+ S+NIL+ K+E + DFG+AR H + + AG + +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH--RTTKMSAAGAYAW 180
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+APE+ + ++ DV+S+GV+ E+L G P
Sbjct: 181 MAPEVIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 134/266 (50%), Gaps = 23/266 (8%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQI 144
A EDF+I +G G +G+VY A+ K + ALK L ++ E A +E + E + S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI++LYG+ ++LI +Y G+++ R + + D + + +A+ALS
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVY---RELQKLSKFDEQRTATYITELANALS 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H ++HRDI N+LL S E +ADFG + +H+ SS R + GT Y+ PE+
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFGWS--VHAPSSRRDDLCGTLDYLPPEM 180
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
+ EK D++S GV+ E L+G+ P + +I RV D
Sbjct: 181 IEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI-------SRVEFTFPDFVT 233
Query: 323 IQDIILVSKIVFACLRSKPTSRPMQR 348
L+S++ L+ P+ RPM R
Sbjct: 234 EGARDLISRL----LKHNPSQRPMLR 255
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 146/302 (48%), Gaps = 35/302 (11%)
Query: 80 TFQEMIVATEDFDIKYC------IGTGGYGSVYRAQLPSGKKVALKKLHH--SETELAFL 131
+F E+ T +FD + +G GG+G VY+ + + VA+KKL T
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 68
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
+ F E ++++ +H N+V+L GF + L+Y YM GSL L D L W
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251
R I + A+ +++LH + +HRDI S NILL+ A ++DFG+AR S+ +
Sbjct: 129 RCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA--SEKFAQX 183
Query: 252 V----VAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMG-------RHPGDLL---- 296
V + GT Y+APE A +T K D+YSFGVV LE++ G R P LL
Sbjct: 184 VMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKE 242
Query: 297 SSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLVR 356
+ + + D +D+++ D T ++ + V+ CL K RP + Q+ L
Sbjct: 243 EIEDEEKTIEDYIDKKMNDA--DSTSVEAMYSVAS---QCLHEKKNKRPDIKKVQQLLQE 297
Query: 357 KT 358
T
Sbjct: 298 MT 299
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 128/259 (49%), Gaps = 23/259 (8%)
Query: 96 CIGTGGYGSVYRAQL--PSGKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
IG G +G VY+ L SGKK VA+K L TE ++ F EA ++ Q H NI+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD-FLGEAGIMGQFSHHNII 109
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
+L G K M +I +YM G+L LR D + + V +++ +A + YL
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMKYL---A 164
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELAYT 267
+ VHRD+++ NIL+NS L V+DFG++R+L D +G + APE
Sbjct: 165 NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISY 224
Query: 268 MVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDI 326
T DV+SFG+V EV+ G P LS N ++M R+P+P+D + I +
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERPYWELS--NHEVMKAINDGFRLPTPMDCPSAIYQL 282
Query: 327 ILVSKIVFACLRSKPTSRP 345
++ C + + RP
Sbjct: 283 MM------QCWQQERARRP 295
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 28/265 (10%)
Query: 93 IKYCIGTGGYGSVYRAQLPS-GKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG G +G V R +L + GKK VA+K L TE E F +EA ++ Q H N
Sbjct: 18 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE-FLSEASIMGQFEHPN 76
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
I++L G + + ++ ++M G+L LR +D + + V +++ +A + YL
Sbjct: 77 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYL-- 132
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPE 263
S VHRD+++ NIL+NS L V+DFG++R L +SS+ T + G + APE
Sbjct: 133 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPE 191
Query: 264 LAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSPIDDQ 320
T D +S+G+V EV+ G P +S+ + +I+ ++Q R+P P D
Sbjct: 192 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD----VINAIEQDYRLPPPPDCP 247
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
T + ++L C + +RP
Sbjct: 248 TSLHQLML------DCWQKDRNARP 266
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 135/265 (50%), Gaps = 28/265 (10%)
Query: 93 IKYCIGTGGYGSVYRAQLPS-GKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG G +G V R +L + GKK VA+K L TE E F +EA ++ Q H N
Sbjct: 20 IEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE-FLSEASIMGQFEHPN 78
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
I++L G + + ++ ++M G+L LR +D + + V +++ +A + YL
Sbjct: 79 IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV--IQLVGMLRGIASGMRYL-- 134
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPE 263
S VHRD+++ NIL+NS L V+DFG++R L +SS+ T + G + APE
Sbjct: 135 -AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPE 193
Query: 264 LAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSPIDDQ 320
T D +S+G+V EV+ G P +S+ + +I+ ++Q R+P P D
Sbjct: 194 AIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD----VINAIEQDYRLPPPPDCP 249
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
T + ++L C + +RP
Sbjct: 250 TSLHQLML------DCWQKDRNARP 268
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 139/271 (51%), Gaps = 20/271 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQIRH 146
+DFDI +G G +G+VY A+ K + ALK L S+ E +E + E + S +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NI+++Y + +K ++L+ ++ RG L+ L+ R D + ++ +A AL Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYC 131
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H ++HRDI N+L+ K E +ADFG + +H+ S R + GT Y+ PE+
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 186
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDI 326
EK D++ GV+ E L+G P D S +++ +D + P + D + +D
Sbjct: 187 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN-VDLKFPPFLSDGS--KD- 242
Query: 327 ILVSKIVFACLRSKPTSR-PMQRVSQEFLVR 356
L+SK+ LR P R P++ V + V+
Sbjct: 243 -LISKL----LRYHPPQRLPLKGVMEHPWVK 268
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 139/271 (51%), Gaps = 20/271 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQIRH 146
+DFDI +G G +G+VY A+ K + ALK L S+ E +E + E + S +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NI+++Y + +K ++L+ ++ RG L+ L+ R D + ++ +A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYC 130
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H ++HRDI N+L+ K E +ADFG + +H+ S R + GT Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDI 326
EK D++ GV+ E L+G P D S +++ +D + P + D + +D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN-VDLKFPPFLSDGS--KD- 241
Query: 327 ILVSKIVFACLRSKPTSR-PMQRVSQEFLVR 356
L+SK+ LR P R P++ V + V+
Sbjct: 242 -LISKL----LRYHPPQRLPLKGVMEHPWVK 267
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 139/271 (51%), Gaps = 20/271 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLE-SFQTEAHLLSQIRH 146
+DFDI +G G +G+VY A+ K + ALK L S+ E +E + E + S +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NI+++Y + +K ++L+ ++ RG L+ L+ R D + ++ +A AL Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYC 130
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H ++HRDI N+L+ K E +ADFG + +H+ S R + GT Y+ PE+
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRRRXMCGTLDYLPPEMIE 185
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDI 326
EK D++ GV+ E L+G P D S +++ +D + P + D + +D
Sbjct: 186 GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN-VDLKFPPFLSDGS--KD- 241
Query: 327 ILVSKIVFACLRSKPTSR-PMQRVSQEFLVR 356
L+SK+ LR P R P++ V + V+
Sbjct: 242 -LISKL----LRYHPPQRLPLKGVMEHPWVK 267
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 138/300 (46%), Gaps = 31/300 (10%)
Query: 80 TFQEMIVATEDFDIKYC------IGTGGYGSVYRAQLPSGKKVALKKLHH--SETELAFL 131
+F E+ T +FD + G GG+G VY+ + + VA+KKL T
Sbjct: 7 SFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 65
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
+ F E + ++ +H N+V+L GF + L+Y Y GSL L D L W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH--SDSSN 249
R I + A+ +++LH + +HRDI S NILL+ A ++DFG+AR +
Sbjct: 126 RCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 250 RTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMG-------RHPGDLL----SS 298
+ + GT Y APE A +T K D+YSFGVV LE++ G R P LL
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI 241
Query: 299 VNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLVRKT 358
+ + + D +D++ D T ++ V+ CL K RP + Q+ L T
Sbjct: 242 EDEEKTIEDYIDKKXNDA--DSTSVEAXYSVAS---QCLHEKKNKRPDIKKVQQLLQEXT 296
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 18/246 (7%)
Query: 93 IKYCIGTGGYGSVYRAQLP-SGKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG G +G V L GK+ VA+K L TE F +EA ++ Q H N
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ-RRDFLSEASIMGQFDHPN 95
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
++ L G + +I ++M GSL LR +D + + V +++ +A + YL
Sbjct: 96 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL-A 152
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPE 263
D + VHRD+++ NIL+NS L V+DFG++R L D+S+ T + G + APE
Sbjct: 153 DM--NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 210
Query: 264 LAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
T DV+S+G+V EV+ G P N ++ D R+P P+D +
Sbjct: 211 AIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVINAIEQDYRLPPPMDCPSA 268
Query: 323 IQDIIL 328
+ ++L
Sbjct: 269 LHQLML 274
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 143/271 (52%), Gaps = 20/271 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLE-SFQTEAHLLSQIRH 146
+DF+I +G G +G+VY A + S VALK L S+ E +E + E + + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NI++LY + ++ ++LI +Y RG L+ L+ ++ D + I++ +A AL Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQ---KSCTFDEQRTATIMEELADALMYC 139
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H ++HRDI N+LL K E +ADFG + +H+ S R + GT Y+ PE+
Sbjct: 140 HGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VHAPSLRRKTMCGTLDYLPPEMIE 194
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDI 326
+ EK D++ GV+ E+L+G P + +S N I +D + P+ + T QD
Sbjct: 195 GRMHNEKVDLWCIGVLCYELLVGNPPFE-SASHNETYRRIVKVDLKFPASVP--TGAQD- 250
Query: 327 ILVSKIVFACLRSKPTSR-PMQRVSQEFLVR 356
L+SK+ LR P+ R P+ +VS VR
Sbjct: 251 -LISKL----LRHNPSERLPLAQVSAHPWVR 276
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 131/268 (48%), Gaps = 29/268 (10%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI 144
++ ++ +++ +G G +G V +A+ K VA+K++ SE+E ++F E LS++
Sbjct: 5 MIDYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIE-SESER---KAFIVELRQLSRV 59
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKLYG CL+ C L+ +Y GSL+ +L + ++ + ++
Sbjct: 60 NHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
YLH +++HRD+ N+LL + + DFG A + + +N G+ ++APE
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPE 174
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLI------DLLDQRVPSPI 317
+ +EKCDV+S+G++ EV+ R P D + +IM L + +P PI
Sbjct: 175 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 234
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ ++ C P+ RP
Sbjct: 235 ES------------LMTRCWSKDPSQRP 250
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 131/268 (48%), Gaps = 29/268 (10%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI 144
++ ++ +++ +G G +G V +A+ K VA+K++ SE+E ++F E LS++
Sbjct: 4 MIDYKEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIE-SESER---KAFIVELRQLSRV 58
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKLYG CL+ C L+ +Y GSL+ +L + ++ + ++
Sbjct: 59 NHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
YLH +++HRD+ N+LL + + DFG A + + +N G+ ++APE
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---GSAAWMAPE 173
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLI------DLLDQRVPSPI 317
+ +EKCDV+S+G++ EV+ R P D + +IM L + +P PI
Sbjct: 174 VFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ ++ C P+ RP
Sbjct: 234 ES------------LMTRCWSKDPSQRP 249
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 93 IKYCIGTGGYGSVYRAQLP-SGKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG G +G V L GK+ VA+K L TE F +EA ++ Q H N
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ-RRDFLSEASIMGQFDHPN 69
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
++ L G + +I ++M GSL LR +D + + V +++ +A + YL
Sbjct: 70 VIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL-A 126
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPE 263
D + VHR +++ NIL+NS L V+DFG++R L D+S+ T + G + APE
Sbjct: 127 DM--NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 264 LAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTV 322
T DV+S+G+V EV+ G P N ++ D R+P P+D +
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERP--YWDMTNQDVINAIEQDYRLPPPMDCPSA 242
Query: 323 IQDIIL 328
+ ++L
Sbjct: 243 LHQLML 248
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 133/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 95
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 153
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG+AR+L D G
Sbjct: 154 RGIASGMKYL-SDM--GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGG 210
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 266
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 267 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 295
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 129/265 (48%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
+G G +G V+ KVA+K L ESF EA ++ +++H +V+LY
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP---ESFLEEAQIMKKLKHDKLVQLYA-V 72
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
+ ++ ++++ +YM +GSL L+ D E L V++ +A ++Y+ + +H
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLK-DGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIH 128
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIAPELAYTMVLTEKCD 275
RD+ S NIL+ + L +ADFG+ARL+ ++ + R + APE A T K D
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 276 VYSFGVVALE-VLMGRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPIDDQTVIQDIILV 329
V+SFG++ E V GR P P + ++L+Q R+P P D + ++++
Sbjct: 189 VWSFGILLTELVTKGRVP-------YPGMNNREVLEQVERGYRMPCPQDCPISLHELMI- 240
Query: 330 SKIVFACLRSKPTSRPMQRVSQEFL 354
C + P RP Q FL
Sbjct: 241 -----HCWKKDPEERPTFEYLQSFL 260
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 133/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 95
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 153
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 154 RGIASGMKYL-SDM--GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 266
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 267 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 295
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 72 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 128
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+++ NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 129 YVERM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 238
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 239 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 269
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 8 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 64
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 65 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMA 121
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 122 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 178
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 231
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R +P RP Q FL
Sbjct: 232 ECPESLHDLMC------QCWRKEPEERPTFEYLQAFL 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ +IR
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKIR 71
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 72 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 128
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 129 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 238
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 239 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 269
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 133/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 95
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 153
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 154 RGIASGMKYL-SDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 266
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 267 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 295
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 133/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 95
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 153
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 154 RGIASGMKYL-SDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 266
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 267 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 295
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 133/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 95
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 153
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 154 RGIASGMKYL-SDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 266
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 267 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 295
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 26 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 83
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 141
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 142 RGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 199 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 254
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 255 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 283
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 68
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 69 HEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRL--PQLVDMSAQIASGMA 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 126 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPE 182
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 235
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R +P RP Q FL
Sbjct: 236 ECPESLHDLMC------QCWRKEPEERPTFEYLQAFL 266
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 95
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 153
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG+ R+L D G
Sbjct: 154 RGIASGMKYL-SDM--GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 266
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 267 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 295
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 133/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 95
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 153
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 154 RGIASGMKYL-SDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 266
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 267 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 295
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 133/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 36 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 93
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 151
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 152 RGIASGMKYL-SDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 208
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 209 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 264
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 265 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 293
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 66
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ +YM GSL LR D + + V ++
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGML 124
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 125 RGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 237
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 238 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 266
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 107/205 (52%), Gaps = 10/205 (4%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
E FD+ +G G YGSVY+A +G+ VA+K++ L+ E ++ Q
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESD----LQEIIKEISIMQQCDSP 84
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
++VK YG ++++ +Y GS+ I+R ++ + D + I++S L YLH
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLH 142
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
+HRDI + NILLN++ A +ADFGVA L + R V GT ++APE+
Sbjct: 143 ---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQE 199
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
+ D++S G+ A+E+ G+ P
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPP 224
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 68
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 69 HEKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRL--PQLVDMSAQIASGMA 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 126 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 182
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 235
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R +P RP Q FL
Sbjct: 236 ECPESLHDLMC------QCWRKEPEERPTFEYLQAFL 266
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 72 HEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 128
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ ++ + R + APE
Sbjct: 129 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 185
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 238
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 239 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 269
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 136/262 (51%), Gaps = 18/262 (6%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ A KVA+K + + E+F EA+++ ++
Sbjct: 12 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV---EAFLAEANVMKTLQ 68
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
H +VKL+ + K+ +++I ++M +GSL L++D E + K ++ +A +++
Sbjct: 69 HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAF 126
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPEL 264
+ + +HRD+ + NIL+++ L +ADFG+AR++ + + R + APE
Sbjct: 127 IEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 183
Query: 265 AYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVI 323
T K DV+SFG++ +E++ GR P +S NP+++ R+P P + +
Sbjct: 184 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERGYRMPRPENCPEEL 241
Query: 324 QDIILVSKIVFACLRSKPTSRP 345
+I++ C +++P RP
Sbjct: 242 YNIMM------RCWKNRPEERP 257
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 6 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 62
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 63 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 119
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 120 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 176
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 229
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 230 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 260
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 4 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 60
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 61 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 117
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 118 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 174
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 227
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 228 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 258
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 237
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 238 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMA 294
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 295 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 404
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R +P RP Q FL
Sbjct: 405 ECPESLHDLMC------QCWRKEPEERPTFEYLQAFL 435
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 72 HEKLVQLYA-VVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 128
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 129 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 238
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 239 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 269
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 237
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 238 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMA 294
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 295 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 404
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R +P RP Q FL
Sbjct: 405 ECPESLHDLMC------QCWRKEPEERPTFEYLQAFL 435
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 72 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 128
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 129 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 238
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 239 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 269
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 320
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 321 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMA 377
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 378 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 434
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 435 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 487
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R +P RP Q FL
Sbjct: 488 ECPESLHDLMC------QCWRKEPEERPTFEYLQAFL 518
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 237
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 238 HEKLVQLYA-VVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMA 294
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 295 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 351
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 404
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R +P RP Q FL
Sbjct: 405 ECPESLHDLMC------QCWRKEPEERPTFEYLQAFL 435
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 22/261 (8%)
Query: 93 IKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG G +G V R +LP ++ VA+K L TE F EA ++ Q H N
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQ-RRDFLGEASIMGQFDHPN 84
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
I+ L G K + ++ +YM GSL L+ +D + + V +++ ++ + YL
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTV--IQLVGMLRGISAGMKYL-S 141
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELA 265
D VHRD+++ NIL+NS L V+DFG++R+L D G + APE
Sbjct: 142 DM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 199
Query: 266 YTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
T DV+S+G+V EV+ G P N ++ R+PSP+D +
Sbjct: 200 AFRKFTSASDVWSYGIVMWEVVSYGERP--YWEMTNQDVIKAVEEGYRLPSPMDCPAALY 257
Query: 325 DIILVSKIVFACLRSKPTSRP 345
++L C + + SRP
Sbjct: 258 QLML------DCWQKERNSRP 272
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 5 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 61
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ + ++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 62 HEKLVQLYA-VVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMA 118
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ ++ + R + APE
Sbjct: 119 YVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPE 175
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 228
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R +P RP Q FL
Sbjct: 229 ECPESLHDLMC------QCWRKEPEERPTFEYLQAFL 259
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 72 HEKLVQLYA-VVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 128
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 238
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 239 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 269
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 26/263 (9%)
Query: 93 IKYCIGTGGYGSVYRAQLP-SGKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG G +G V +L GK+ VA+K L T+ F +EA ++ Q H N
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPN 91
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
I+ L G K + +I +YM GSL LR +D R + V +++ + + YL
Sbjct: 92 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--RFTVIQLVGMLRGIGSGMKYLS- 148
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELA 265
S VHRD+++ NIL+NS L V+DFG++R+L D G + APE
Sbjct: 149 --DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 206
Query: 266 YTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSPIDDQTV 322
T DV+S+G+V EV+ G P +S+ + +I +++ R+P P+D
Sbjct: 207 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD----VIKAIEEGYRLPPPMDCPIA 262
Query: 323 IQDIILVSKIVFACLRSKPTSRP 345
+ ++L C + + + RP
Sbjct: 263 LHQLML------DCWQKERSDRP 279
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 17/262 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G V++ +KV K+ E +E Q E +LSQ + K YG
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 94
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L +++I +Y+ GS +L E LD T+ I++ + L YLH + +H
Sbjct: 95 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---KKIH 147
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDV 276
RDI + N+LL+ E +ADFGVA L R GT ++APE+ K D+
Sbjct: 148 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 207
Query: 277 YSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFAC 336
+S G+ A+E+ G P S ++P +L L+ + P ++ + + V AC
Sbjct: 208 WSLGITAIELARGEPPH---SELHPMKVLF-LIPKNNPPTLEGNYSKP----LKEFVEAC 259
Query: 337 LRSKPTSRPMQR--VSQEFLVR 356
L +P+ RP + + +F++R
Sbjct: 260 LNKEPSFRPTAKELLKHKFILR 281
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 17/262 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G V++ +KV K+ E +E Q E +LSQ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L +++I +Y+ GS +L E LD T+ I++ + L YLH + +H
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---KKIH 127
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDV 276
RDI + N+LL+ E +ADFGVA L R GT ++APE+ K D+
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 277 YSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFAC 336
+S G+ A+E+ G P S ++P +L L+ + P ++ + + V AC
Sbjct: 188 WSLGITAIELARGEPPH---SELHPMKVLF-LIPKNNPPTLEGNYSKP----LKEFVEAC 239
Query: 337 LRSKPTSRPMQR--VSQEFLVR 356
L +P+ RP + + +F++R
Sbjct: 240 LNKEPSFRPTAKELLKHKFILR 261
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 17/262 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G V++ +KV K+ E +E Q E +LSQ + K YG
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 89
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L +++I +Y+ GS +L E LD T+ I++ + L YLH + +H
Sbjct: 90 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---KKIH 142
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDV 276
RDI + N+LL+ E +ADFGVA L R GT ++APE+ K D+
Sbjct: 143 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 202
Query: 277 YSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFAC 336
+S G+ A+E+ G P S ++P +L L+ + P ++ + + V AC
Sbjct: 203 WSLGITAIELARGEPPH---SELHPMKVLF-LIPKNNPPTLEGNYSKP----LKEFVEAC 254
Query: 337 LRSKPTSRPMQR--VSQEFLVR 356
L +P+ RP + + +F++R
Sbjct: 255 LNKEPSFRPTAKELLKHKFILR 276
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 124/262 (47%), Gaps = 17/262 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G V++ +KV K+ E +E Q E +LSQ + K YG
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY 74
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L +++I +Y+ GS +L E LD T+ I++ + L YLH + +H
Sbjct: 75 LKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHSE---KKIH 127
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDV 276
RDI + N+LL+ E +ADFGVA L R GT ++APE+ K D+
Sbjct: 128 RDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADI 187
Query: 277 YSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFAC 336
+S G+ A+E+ G P S ++P +L L+ + P ++ + + V AC
Sbjct: 188 WSLGITAIELARGEPPH---SELHPMKVLF-LIPKNNPPTLEGNYSKP----LKEFVEAC 239
Query: 337 LRSKPTSRPMQR--VSQEFLVR 356
L +P+ RP + + +F++R
Sbjct: 240 LNKEPSFRPTAKELLKHKFILR 261
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 17/264 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G V++ ++V K+ E +E Q E +LSQ + K YG
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L +++I +Y+ GS +LR A D + ++K + L YLH + +H
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLR----AGPFDEFQIATMLKEILKGLDYLHSE---KKIH 143
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDV 276
RDI + N+LL+ + + +ADFGVA L R GT ++APE+ K D+
Sbjct: 144 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADI 203
Query: 277 YSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFAC 336
+S G+ A+E+ G P S ++P +L + P+ + D T + + AC
Sbjct: 204 WSLGITAIELAKGEPPN---SDMHPMRVLFLIPKNNPPTLVGDFTKS-----FKEFIDAC 255
Query: 337 LRSKPTSRPMQR--VSQEFLVRKT 358
L P+ RP + + +F+V+ +
Sbjct: 256 LNKDPSFRPTAKELLKHKFIVKNS 279
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 26/263 (9%)
Query: 93 IKYCIGTGGYGSVYRAQLP-SGKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG G +G V +L GK+ VA+K L T+ F +EA ++ Q H N
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPN 76
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
I+ L G K + +I +YM GSL LR +D R + V +++ + + YL
Sbjct: 77 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--RFTVIQLVGMLRGIGSGMKYLS- 133
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELA 265
S VHRD+++ NIL+NS L V+DFG++R+L D G + APE
Sbjct: 134 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 191
Query: 266 YTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSPIDDQTV 322
T DV+S+G+V EV+ G P +S+ + +I +++ R+P P+D
Sbjct: 192 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD----VIKAIEEGYRLPPPMDCPIA 247
Query: 323 IQDIILVSKIVFACLRSKPTSRP 345
+ ++L C + + + RP
Sbjct: 248 LHQLML------DCWQKERSDRP 264
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 136/262 (51%), Gaps = 18/262 (6%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ A KVA+K + + E+F EA+++ ++
Sbjct: 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV---EAFLAEANVMKTLQ 241
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
H +VKL+ + K+ +++I ++M +GSL L++D E + K ++ +A +++
Sbjct: 242 HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAF 299
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPEL 264
+ + +HRD+ + NIL+++ L +ADFG+AR++ + + R + APE
Sbjct: 300 IEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEA 356
Query: 265 AYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVI 323
T K DV+SFG++ +E++ GR P +S NP+++ R+P P + +
Sbjct: 357 INFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERGYRMPRPENCPEEL 414
Query: 324 QDIILVSKIVFACLRSKPTSRP 345
+I++ C +++P RP
Sbjct: 415 YNIMM------RCWKNRPEERP 430
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 26/263 (9%)
Query: 93 IKYCIGTGGYGSVYRAQLP-SGKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG G +G V +L GK+ VA+K L T+ F +EA ++ Q H N
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ-RRDFLSEASIMGQFDHPN 70
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
I+ L G K + +I +YM GSL LR +D R + V +++ + + YL
Sbjct: 71 IIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDG--RFTVIQLVGMLRGIGSGMKYLS- 127
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELA 265
S VHRD+++ NIL+NS L V+DFG++R+L D G + APE
Sbjct: 128 --DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 185
Query: 266 YTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSPIDDQTV 322
T DV+S+G+V EV+ G P +S+ + +I +++ R+P P+D
Sbjct: 186 AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD----VIKAIEEGYRLPPPMDCPIA 241
Query: 323 IQDIILVSKIVFACLRSKPTSRP 345
+ ++L C + + + RP
Sbjct: 242 LHQLML------DCWQKERSDRP 258
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 182 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSP---EAFLQEAQVMKKLR 238
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +GSL L+ + + +RL + V++ +A ++
Sbjct: 239 HEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 295
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ RL+ + + R + APE
Sbjct: 296 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPE 352
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 405
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 406 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 436
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +G L L+ + + +RL + V++ +A ++
Sbjct: 72 HEKLVQLYA-VVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 128
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 238
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 239 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 269
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ +VA+K L E+F EA ++ ++R
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP---EAFLQEAQVMKKLR 71
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND-DEAIRLDWTKRVNIVKSMAHALS 204
H +V+LY + ++ ++++ +YM +G L L+ + + +RL + V++ +A ++
Sbjct: 72 HEKLVQLYA-VVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRL--PQLVDMAAQIASGMA 128
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPE 263
Y+ + VHRD+ + NIL+ L VADFG+ARL+ + + R + APE
Sbjct: 129 YVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPE 185
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ-----RVPSPI 317
A T K DV+SFG++ E+ GR P P ++ ++LDQ R+P P
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVP-------YPGMVNREVLDQVERGYRMPCPP 238
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFL 354
+ + D++ C R P RP Q FL
Sbjct: 239 ECPESLHDLMC------QCWRKDPEERPTFEYLQAFL 269
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 95
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ + M GSL LR D + + V ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGML 153
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 154 RGIASGMKYL-SDM--GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 266
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 267 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 295
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 38 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 95
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ + M GSL LR D + + V ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGML 153
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL D VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 154 RGIASGMKYL-SDM--GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 210
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 211 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 266
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 267 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 295
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 27/275 (9%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSV--YRAQLPSGKK--VALKKLHHSETELAFLESFQT 136
F + + AT + I +G G +G V R +LPS K+ VA+K L TE F
Sbjct: 9 FAKELDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQ-RRDFLG 66
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
EA ++ Q H NI++L G K + ++ + M GSL LR D + + V ++
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGML 124
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL VHRD+++ NIL+NS L V+DFG++R+L D G
Sbjct: 125 RGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 257 H---GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ- 311
+ +PE T DV+S+G+V EV+ G P +S+ + +I +D+
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD----VIKAVDEG 237
Query: 312 -RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+P P+D + ++L C + +RP
Sbjct: 238 YRLPPPMDCPAALYQLML------DCWQKDRNNRP 266
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 133/275 (48%), Gaps = 30/275 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKK---LHHSETELAFLESFQT---EAH 139
+A + + + IG GG+G V++ +L K V K L SE E +E FQ E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
++S + H NIVKLYG + M + +++ G L+ L D+A + W+ ++ ++ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDI 131
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLE-----AFVADFGVARL-LHSDSSNRTVV 253
A + Y+ P IVHRD+ S NI L S E A VADFG+++ +HS S +
Sbjct: 132 ALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG----L 186
Query: 254 AGTHGYIAPEL--AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQ 311
G ++APE A TEK D YSF ++ +L G P D S KI I+++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG--KIKFINMIRE 244
Query: 312 RVPSPIDDQTVIQDI-ILVSKIVFACLRSKPTSRP 345
P T+ +D + ++ C P RP
Sbjct: 245 EGLRP----TIPEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 132/275 (48%), Gaps = 30/275 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKK---LHHSETELAFLESFQT---EAH 139
+A + + + IG GG+G V++ +L K V K L SE E +E FQ E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
++S + H NIVKLYG + M + +++ G L+ L D+A + W+ ++ ++ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDI 131
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLE-----AFVADFGVARL-LHSDSSNRTVV 253
A + Y+ P IVHRD+ S NI L S E A VADFG ++ +HS S +
Sbjct: 132 ALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG----L 186
Query: 254 AGTHGYIAPEL--AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQ 311
G ++APE A TEK D YSF ++ +L G P D S KI I+++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG--KIKFINMIRE 244
Query: 312 RVPSPIDDQTVIQDI-ILVSKIVFACLRSKPTSRP 345
P T+ +D + ++ C P RP
Sbjct: 245 EGLRP----TIPEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 6/205 (2%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
ED+++ Y IGTG YG + + S GK + K+L + A + +E +LL +++H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 147 RNIVKLYGFCLHKK--CMFLIYKYMRRGSLFCIL-RNDDEAIRLDWTKRVNIVKSMAHAL 203
NIV+ Y + + ++++ +Y G L ++ + E LD + ++ + AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 204 SYLH--CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
H D +++HRD+ N+ L+ K + DFG+AR+L+ D+S GT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMS 184
Query: 262 PELAYTMVLTEKCDVYSFGVVALEV 286
PE M EK D++S G + E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 105/205 (51%), Gaps = 6/205 (2%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
ED+++ Y IGTG YG + + S GK + K+L + A + +E +LL +++H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 147 RNIVKLYGFCLHKK--CMFLIYKYMRRGSLFCIL-RNDDEAIRLDWTKRVNIVKSMAHAL 203
NIV+ Y + + ++++ +Y G L ++ + E LD + ++ + AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 204 SYLH--CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
H D +++HRD+ N+ L+ K + DFG+AR+L+ D+S GT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMS 184
Query: 262 PELAYTMVLTEKCDVYSFGVVALEV 286
PE M EK D++S G + E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 72
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 73 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 130
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ ++ + R + A
Sbjct: 131 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 187
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR P ++ NP+++
Sbjct: 188 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVI 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 69
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 70 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 127
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ ++ + R + A
Sbjct: 128 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 184
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR P ++ NP+++
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVI 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 71
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 72 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 129
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ ++ + R + A
Sbjct: 130 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 186
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR P ++ NP+++
Sbjct: 187 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVI 228
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 26/208 (12%)
Query: 97 IGTGGYGSVYR-AQLPSGKKVALKKL--HHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G G +G + +G+ + +K+L ET+ FL+ E ++ + H N++K
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK----EVKVMRCLEHPNVLKFI 73
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
G K + I +Y++ G+L I+++ D + W++RV+ K +A ++YLH +
Sbjct: 74 GVLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHS---MN 128
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLL--------------HSDSSNRTVVAGTHGY 259
I+HRD++S+N L+ VADFG+ARL+ D R V G +
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVL 287
+APE+ EK DV+SFG+V E++
Sbjct: 189 MAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 63
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 121
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ ++ + R + A
Sbjct: 122 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 178
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR P ++ NP+++
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVI 220
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 117/224 (52%), Gaps = 12/224 (5%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 65
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 66 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 123
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ ++ + R + A
Sbjct: 124 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 180
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR P ++ NP+++
Sbjct: 181 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVI 222
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 69
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 70 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 127
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ + + R + A
Sbjct: 128 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 184
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR P ++ NP+++
Sbjct: 185 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVI 226
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 26/263 (9%)
Query: 93 IKYCIGTGGYGSV--YRAQLPSGKKVA--LKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG G +G V R +LP + VA +K L TE F EA ++ Q H N
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ-RRDFLCEASIMGQFDHPN 105
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V L G K + ++ ++M G+L LR D + + V +++ +A + YL
Sbjct: 106 VVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV--IQLVGMLRGIAAGMRYL-- 161
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELA 265
VHRD+++ NIL+NS L V+DFG++R++ D G + APE
Sbjct: 162 -ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAI 220
Query: 266 YTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSPIDDQTV 322
T DV+S+G+V EV+ G P +S+ + +I +++ R+P+P+D
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD----VIKAIEEGYRLPAPMDCPAG 276
Query: 323 IQDIILVSKIVFACLRSKPTSRP 345
+ ++L C + + RP
Sbjct: 277 LHQLML------DCWQKERAERP 293
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 16/226 (7%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 64
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 65 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 122
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ ++ + R + A
Sbjct: 123 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 179
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GR--HPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR +PG NP+++
Sbjct: 180 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG----MTNPEVI 221
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 73
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 74 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 131
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ + + R + A
Sbjct: 132 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 188
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR P ++ NP+++
Sbjct: 189 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVI 230
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 68
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 69 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 126
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ + + R + A
Sbjct: 127 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 183
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR P ++ NP+++
Sbjct: 184 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVI 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 132/275 (48%), Gaps = 30/275 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKK---LHHSETELAFLESFQT---EAH 139
+A + + + IG GG+G V++ +L K V K L SE E +E FQ E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
++S + H NIVKLYG + M + +++ G L+ L D+A + W+ ++ ++ +
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRM--VMEFVPCGDLYHRLL--DKAHPIKWSVKLRLMLDI 131
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLE-----AFVADFGVARL-LHSDSSNRTVV 253
A + Y+ P IVHRD+ S NI L S E A VADF +++ +HS S +
Sbjct: 132 ALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG----L 186
Query: 254 AGTHGYIAPEL--AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQ 311
G ++APE A TEK D YSF ++ +L G P D S KI I+++ +
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG--KIKFINMIRE 244
Query: 312 RVPSPIDDQTVIQDI-ILVSKIVFACLRSKPTSRP 345
P T+ +D + ++ C P RP
Sbjct: 245 EGLRP----TIPEDCPPRLRNVIELCWSGDPKKRP 275
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 113/213 (53%), Gaps = 17/213 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETEL-AFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G G +G V+ + KVA+K L + AFLE EA+L+ ++H +V+LY
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLVRLYAV 76
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
++ +++I +YM +GSL L++ DE ++ K ++ +A ++Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKS-DEGGKVLLPKLIDFSAQIAEGMAYIERK---NYI 132
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPELAYTMVLTEKC 274
HRD+ + N+L++ L +ADFG+AR++ + + R + APE T K
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 275 DVYSFGVVALEVLM-------GRHPGDLLSSVN 300
DV+SFG++ E++ GR D++++++
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNADVMTALS 225
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
K + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 74 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 124
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVA--RLLHSDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 242 MKRLMAECLKKKRDERPL 259
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 117/226 (51%), Gaps = 16/226 (7%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 63
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 121
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ ++ + R + A
Sbjct: 122 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTA 178
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GR--HPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR +PG NP+++
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG----MTNPEVI 220
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 130/254 (51%), Gaps = 16/254 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
K + ++ ++ SL+ L + + + K ++I + A + YLH SI+H
Sbjct: 90 T-KPQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIH 143
Query: 217 RDISSNNILLNSKLEAFVADFGVA--RLLHSDSSNRTVVAGTHGYIAPE---LAYTMVLT 271
RD+ SNNI L+ + DFG+A + S S ++G+ ++APE + + +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 272 EKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSK 331
+ DVY+FG+V E++ G+ P S++N + +I+++ + SP + + +
Sbjct: 204 FQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR 260
Query: 332 IVFACLRSKPTSRP 345
++ CL+ K RP
Sbjct: 261 LMAECLKKKRDERP 274
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 17/264 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G VY+ K+V K+ E +E Q E +LSQ I + +G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L +++I +Y+ GS +L+ L+ T I++ + L YLH + +H
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLLKPGP----LEETYIATILREILKGLDYLHSE---RKIH 139
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDV 276
RDI + N+LL+ + + +ADFGVA L R GT ++APE+ K D+
Sbjct: 140 RDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADI 199
Query: 277 YSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFAC 336
+S G+ A+E+ G P S ++P +L L+ + P ++ Q + V AC
Sbjct: 200 WSLGITAIELAKGEPPN---SDLHPMRVLF-LIPKNSPPTLEGQHSKP----FKEFVEAC 251
Query: 337 LRSKPTSRPMQR--VSQEFLVRKT 358
L P RP + + +F+ R T
Sbjct: 252 LNKDPRFRPTAKELLKHKFITRYT 275
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 130/254 (51%), Gaps = 16/254 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
K + ++ ++ SL+ L + + + K ++I + A + YLH SI+H
Sbjct: 78 T-KPQLAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIH 131
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLH--SDSSNRTVVAGTHGYIAPE---LAYTMVLT 271
RD+ SNNI L+ + DFG+A + S S ++G+ ++APE + + +
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 272 EKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSK 331
+ DVY+FG+V E++ G+ P S++N + +I+++ + SP + + +
Sbjct: 192 FQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR 248
Query: 332 IVFACLRSKPTSRP 345
++ CL+ K RP
Sbjct: 249 LMAECLKKKRDERP 262
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
K + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 152
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVA--RLLHSDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 269
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 270 MKRLMAECLKKKRDERPL 287
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
K + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 152
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLH--SDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 269
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 270 MKRLMAECLKKKRDERPL 287
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
K + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 101 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 151
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARL--LHSDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 268
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 269 MKRLMAECLKKKRDERPL 286
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
K + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 94 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 144
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVA--RLLHSDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 261
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 262 MKRLMAECLKKKRDERPL 279
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 16/226 (7%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 63
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 64 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 121
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ + + R + A
Sbjct: 122 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 178
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GR--HPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR +PG NP+++
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG----MTNPEVI 220
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
K + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 79 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 129
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARL--LHSDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 246
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 247 MKRLMAECLKKKRDERPL 264
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
K + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 76 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 126
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARL--LHSDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 243
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 244 MKRLMAECLKKKRDERPL 261
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
K + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 74 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 124
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARL--LHSDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 242 MKRLMAECLKKKRDERPL 259
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
K + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 79 T-KPQLAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 129
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARL--LHSDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 246
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 247 MKRLMAECLKKKRDERPL 264
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 28/250 (11%)
Query: 93 IKYCIGTGGYGSV--YRAQLPSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG+G G V R ++P + V A+K L TE F +EA ++ Q H N
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPN 111
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
I++L G + ++ +YM GSL LR D + + V +++ + + YL
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL-S 168
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELA 265
D VHRD+++ N+L++S L V+DFG++R+L D G + APE
Sbjct: 169 DL--GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAI 226
Query: 266 YTMVLTEKCDVYSFGVVALEVLM-GRHP------GDLLSSVNPKIMLIDLLDQRVPSPID 318
+ DV+SFGVV EVL G P D++SSV R+P+P+
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY--------RLPAPMG 278
Query: 319 DQTVIQDIIL 328
+ ++L
Sbjct: 279 CPHALHQLML 288
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
ED+++ Y IGTG YG + + S GK + K+L + A + +E +LL +++H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 147 RNIVKLYGFCLHKK--CMFLIYKYMRRGSLFCIL-RNDDEAIRLDWTKRVNIVKSMAHAL 203
NIV+ Y + + ++++ +Y G L ++ + E LD + ++ + AL
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 204 SYLH--CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
H D +++HRD+ N+ L+ K + DFG+AR+L+ D GT Y++
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMS 184
Query: 262 PELAYTMVLTEKCDVYSFGVVALEV 286
PE M EK D++S G + E+
Sbjct: 185 PEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+D++++ IG+G V A P +KVA+K+++ + + + ++ E +SQ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS-MDELLKEIQAMSQCHHP 73
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRN-----DDEAIRLDWTKRVNIVKSMAHA 202
NIV Y + K ++L+ K + GS+ I+++ + ++ LD + I++ +
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD-----SSNRTVVAGTH 257
L YLH + +HRD+ + NILL +ADFGV+ L + + R GT
Sbjct: 134 LEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 258 GYIAPELAYTMVLTE-KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++APE+ + + K D++SFG+ A+E+ G P P +L+ L PS
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP---YHKYPPMKVLMLTLQNDPPSL 247
Query: 317 IDDQTVIQDIILVS-------KIVFACLRSKPTSRP 345
+T +QD ++ K++ CL+ P RP
Sbjct: 248 ---ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 280
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 134/276 (48%), Gaps = 29/276 (10%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+D++++ IG+G V A P +KVA+K+++ + + + ++ E +SQ H
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTS-MDELLKEIQAMSQCHHP 68
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRN-----DDEAIRLDWTKRVNIVKSMAHA 202
NIV Y + K ++L+ K + GS+ I+++ + ++ LD + I++ +
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD-----SSNRTVVAGTH 257
L YLH + +HRD+ + NILL +ADFGV+ L + + R GT
Sbjct: 129 LEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 258 GYIAPELAYTMVLTE-KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++APE+ + + K D++SFG+ A+E+ G P P +L+ L PS
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP---YHKYPPMKVLMLTLQNDPPSL 242
Query: 317 IDDQTVIQDIILVS-------KIVFACLRSKPTSRP 345
+T +QD ++ K++ CL+ P RP
Sbjct: 243 ---ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP 275
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 16/226 (7%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 58
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 59 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 116
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIA 261
++++ + +HRD+ + NIL++ L +ADFG+ARL+ + + R + A
Sbjct: 117 MAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 173
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GR--HPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR +PG NP+++
Sbjct: 174 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG----MTNPEVI 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 134/261 (51%), Gaps = 26/261 (9%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+ E ++ +G G +G V+ A KVA+K + + E+F EA+++ ++
Sbjct: 179 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSV---EAFLAEANVMKTLQ 235
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
H +VKL+ + K+ +++I ++M +GSL L++D E + K ++ +A +++
Sbjct: 236 HDKLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSD-EGSKQPLPKLIDFSAQIAEGMAF 293
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELA 265
+ + +HRD+ + NIL+++ L +ADFG+AR+ + + T APE
Sbjct: 294 IEQR---NYIHRDLRAANILVSASLVCKIADFGLARV-----GAKFPIKWT----APEAI 341
Query: 266 YTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQ 324
T K DV+SFG++ +E++ GR P +S NP+++ R+P P + +
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERGYRMPRPENCPEELY 399
Query: 325 DIILVSKIVFACLRSKPTSRP 345
+I++ C +++P RP
Sbjct: 400 NIMM------RCWKNRPEERP 414
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 130/254 (51%), Gaps = 16/254 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
+ + ++ ++ SL+ L + + + K ++I + A + YLH SI+H
Sbjct: 90 TAPQ-LAIVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIH 143
Query: 217 RDISSNNILLNSKLEAFVADFGVA--RLLHSDSSNRTVVAGTHGYIAPE---LAYTMVLT 271
RD+ SNNI L+ + DFG+A + S S ++G+ ++APE + + +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 272 EKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSK 331
+ DVY+FG+V E++ G+ P S++N + +I+++ + SP + + +
Sbjct: 204 FQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKR 260
Query: 332 IVFACLRSKPTSRP 345
++ CL+ K RP
Sbjct: 261 LMAECLKKKRDERP 274
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 28/250 (11%)
Query: 93 IKYCIGTGGYGSV--YRAQLPSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
I+ IG+G G V R ++P + V A+K L TE F +EA ++ Q H N
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ-RRDFLSEASIMGQFDHPN 111
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
I++L G + ++ +YM GSL LR D + + V +++ + + YL
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL-S 168
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELA 265
D VHRD+++ N+L++S L V+DFG++R+L D G + APE
Sbjct: 169 DL--GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAI 226
Query: 266 YTMVLTEKCDVYSFGVVALEVLM-GRHP------GDLLSSVNPKIMLIDLLDQRVPSPID 318
+ DV+SFGVV EVL G P D++SSV R+P+P+
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGY--------RLPAPMG 278
Query: 319 DQTVIQDIIL 328
+ ++L
Sbjct: 279 CPHALHQLML 288
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 112/210 (53%), Gaps = 12/210 (5%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
+G G G V+ KVA+K L ++F EA+L+ Q++H+ +V+LY
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMKQLQHQRLVRLYA-V 76
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
+ ++ +++I +YM GSL L+ I+L K +++ +A ++++ + +H
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGYIAPELAYTMVLTEKCD 275
RD+ + NIL++ L +ADFG+ARL+ ++ + R + APE T K D
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 276 VYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
V+SFG++ E++ GR P ++ NP+++
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMT--NPEVI 220
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 131/258 (50%), Gaps = 22/258 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L+ + L++F+ E +L + RH NI+ G+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 157 LHKKCMFLIYKYMRRGSLFC---ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
+ + ++ ++ SL+ I+ E I+L ++I + A + YLH S
Sbjct: 74 TAPQ-LAIVTQWCEGSSLYHHLHIIETKFEMIKL-----IDIARQTAQGMDYLHAK---S 124
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARL--LHSDSSNRTVVAGTHGYIAPELAYTM--- 268
I+HRD+ SNNI L+ L + DFG+A + S S ++G+ ++APE+
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 269 VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIIL 328
+ + DVY+FG+V E++ G+ P S++N + +I ++ + SP +
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKA 241
Query: 329 VSKIVFACLRSKPTSRPM 346
+ +++ CL+ K RP+
Sbjct: 242 MKRLMAECLKKKRDERPL 259
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 71
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 130
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 131 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESL 185
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 186 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 238
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 239 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 272
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 141/298 (47%), Gaps = 36/298 (12%)
Query: 75 YDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLES 133
+ G + + + D +K+ +G G YG VY VA+K L E+ E
Sbjct: 12 FQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EE 68
Query: 134 FQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRV 193
F EA ++ +I+H N+V+L G C + ++I ++M G+L LR + ++ +
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLL 127
Query: 194 NIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+ ++ A+ YL + +HRD+++ N L+ VADFG++RL+ D+ T
Sbjct: 128 YMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAH 182
Query: 254 AGTH---GYIAPE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLI 306
AG + APE LAY + K DV++FGV+ E+ M +PG LS V
Sbjct: 183 AGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------Y 235
Query: 307 DLL--DQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+LL D R+ P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 236 ELLEKDYRMERPEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 284
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 72
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 131
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAPAGAKFPIKWTAPESL 186
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 187 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 239
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 240 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 273
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 15 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 71
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 130
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 131 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESL 185
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 186 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 238
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 239 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 272
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
E V E + +G G +G V+ KVA+K L ++F EA+L+
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP---DAFLAEANLMK 59
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q++H+ +V+LY + ++ +++I +YM GSL L+ I+L K +++ +A
Sbjct: 60 QLQHQRLVRLYA-VVTQEPIYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEG 117
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIA 261
++++ + +HR++ + NIL++ L +ADFG+ARL+ + + R + A
Sbjct: 118 MAFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 174
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIM 304
PE T K DV+SFG++ E++ GR P ++ NP+++
Sbjct: 175 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--NPEVI 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 33/240 (13%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQL----PSGKK--VALKKLHHSETELAFLESFQTEAH 139
+ D +K +G G +G V+ A+ P+ K VA+K L + LA + FQ EA
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL--KDPTLAARKDFQREAE 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDEAIRLDWTKR----- 192
LL+ ++H +IVK YG C + ++++YM+ G L LR D I +D R
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 193 ------VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246
++I +A + YL VHRD+++ N L+ + L + DFG++R ++S
Sbjct: 130 LGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 247 SSNRTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVN 300
R G H ++ PE T + DV+SFGV+ E+ G+ P LS+
Sbjct: 187 DYYRV---GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE 243
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 75
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 134
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPESL 189
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 190 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 242
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 243 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 276
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 75
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 134
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 189
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 190 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 242
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 243 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 276
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 70
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 129
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 184
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 185 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 237
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 238 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 271
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 113/213 (53%), Gaps = 17/213 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETEL-AFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G G +G V+ + KVA+K L + AFLE EA+L+ ++H +V+LY
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE----EANLMKTLQHDKLVRLYAV 75
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
++ +++I ++M +GSL L++ DE ++ K ++ +A ++Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKS-DEGGKVLLPKLIDFSAQIAEGMAYIERK---NYI 131
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPELAYTMVLTEKC 274
HRD+ + N+L++ L +ADFG+AR++ + + R + APE T K
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 275 DVYSFGVVALEVLM-------GRHPGDLLSSVN 300
+V+SFG++ E++ GR D++S+++
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALS 224
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 75
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 134
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 189
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 190 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 242
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 243 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 276
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 75
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 134
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 135 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 189
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 190 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 242
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 243 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 276
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 18 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 74
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 133
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 134 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 188
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 189 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 241
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 242 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 275
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 44/287 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 70
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDE--AIRLDWTKRVNIVKSMAHALS 204
+V+L G C + ++I ++M G+L LR N E A+ L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIA 261
YL + +HRD+++ N L+ VADFG++RL+ D+ T AG + A
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 180
Query: 262 PE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPS 315
PE LAY + K DV++FGV+ E+ M +PG LS V +LL D R+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMER 233
Query: 316 PIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 234 PEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 271
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 72
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 131
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 186
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 187 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 239
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 240 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 273
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 44/287 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 19 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 75
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDE--AIRLDWTKRVNIVKSMAHALS 204
+V+L G C + ++I ++M G+L LR N E A+ L + + ++ A+
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 130
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIA 261
YL + +HRD+++ N L+ VADFG++RL+ D+ T AG + A
Sbjct: 131 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 185
Query: 262 PE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPS 315
PE LAY + K DV++FGV+ E+ M +PG LS V +LL D R+
Sbjct: 186 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMER 238
Query: 316 PIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 239 PEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 276
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 44/287 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 70
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDE--AIRLDWTKRVNIVKSMAHALS 204
+V+L G C + ++I ++M G+L LR N E A+ L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIA 261
YL + +HRD+++ N L+ VADFG++RL+ D+ T AG + A
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 180
Query: 262 PE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPS 315
PE LAY + K DV++FGV+ E+ M +PG LS V +LL D R+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMER 233
Query: 316 PIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 234 PEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 16 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 72
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 131
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 132 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 186
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 187 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 239
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 240 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 273
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 44/287 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 70
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDE--AIRLDWTKRVNIVKSMAHALS 204
+V+L G C + ++I ++M G+L LR N E A+ L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIA 261
YL + +HRD+++ N L+ VADFG++RL+ D+ T AG + A
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 180
Query: 262 PE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPS 315
PE LAY + K DV++FGV+ E+ M +PG LS V +LL D R+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMER 233
Query: 316 PIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 234 PEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 271
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 129/268 (48%), Gaps = 36/268 (13%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 89
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDEAIRLDWTKRVNIVKSMAHALSYL 206
+V+L G C + +++ +YM G+L LR N +E + + + ++ A+ YL
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV---VLLYMATQISSAMEYL 146
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE 263
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE
Sbjct: 147 EKK---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE 201
Query: 264 -LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSPI 317
LAY + K DV++FGV+ E+ M +PG LS V DLL++ R+ P
Sbjct: 202 SLAYN-TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YDLLEKGYRMEQPE 254
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ +++ AC + P RP
Sbjct: 255 GCPPKVYELMR------ACWKWSPADRP 276
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 138/287 (48%), Gaps = 44/287 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 70
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDE--AIRLDWTKRVNIVKSMAHALS 204
+V+L G C + ++I ++M G+L LR N E A+ L + + ++ A+
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 125
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIA 261
YL + +HRD+++ N L+ VADFG++RL+ D+ T AG + A
Sbjct: 126 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 180
Query: 262 PE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPS 315
PE LAY + K DV++FGV+ E+ M +PG LS V +LL D R+
Sbjct: 181 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMER 233
Query: 316 PIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 234 PEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 128/266 (48%), Gaps = 32/266 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 70
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 129
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HRD+++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 130 K---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 184
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 185 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 237
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP 345
+ +++ AC + P+ RP
Sbjct: 238 PEKVYELMR------ACWQWNPSDRP 257
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 139/287 (48%), Gaps = 44/287 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 68
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDE--AIRLDWTKRVNIVKSMAHALS 204
+V+L G C + ++I ++M G+L LR N E A+ L + + ++ A+
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 123
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIA 261
YL + +HRD+++ N L+ VADFG++RL+ D+ T AG + A
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 178
Query: 262 PE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPS 315
PE LAY + K DV++FGV+ E+ M +PG ++P + +LL D R+
Sbjct: 179 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPG-----IDPS-QVYELLEKDYRMER 231
Query: 316 PIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 232 PEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 269
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 16/258 (6%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
EDF + +G G + VYRA+ + +G +VA+K + + ++ Q E + Q++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+I++LY + ++L+ + G + L+N + + + + + + + YL
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIITGMLYL 128
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H I+HRD++ +N+LL + +ADFG+A L + GT YI+PE+A
Sbjct: 129 HSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIAT 185
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDI 326
+ DV+S G + +L+GR P D +V + + L D +PS +
Sbjct: 186 RSAHGLESDVWSLGCMFYTLLIGRPPFD-TDTVKNTLNKVVLADYEMPSFLS-------- 236
Query: 327 ILVSKIVFACLRSKPTSR 344
I ++ LR P R
Sbjct: 237 IEAKDLIHQLLRRNPADR 254
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 30/238 (12%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQ----LPSGKK--VALKKLHHSETELAFLESFQTEAH 139
+ D +K+ +G G +G V+ A+ LP K VA+K L E + + FQ EA
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAE 72
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR------------L 187
LL+ ++H++IV+ +G C + + ++++YMR G L LR+ + L
Sbjct: 73 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 132
Query: 188 DWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247
+ + + +A + YL VHRD+++ N L+ L + DFG++R ++S
Sbjct: 133 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Query: 248 ----SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVN 300
RT++ ++ PE T + DV+SFGVV E+ G+ P LS+
Sbjct: 190 YYRVGGRTMLPIR--WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 245
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 113/234 (48%), Gaps = 30/234 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQ----LPSGKK--VALKKLHHSETELAFLESFQTEAHLLSQ 143
D +K+ +G G +G V+ A+ LP K VA+K L E + + FQ EA LL+
Sbjct: 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAELLTM 99
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR------------LDWTK 191
++H++IV+ +G C + + ++++YMR G L LR+ + L +
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQ 159
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS---- 247
+ + +A + YL VHRD+++ N L+ L + DFG++R ++S
Sbjct: 160 LLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV 216
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVN 300
RT++ ++ PE T + DV+SFGVV E+ G+ P LS+
Sbjct: 217 GGRTMLPIR--WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 268
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 139/287 (48%), Gaps = 44/287 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 68
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDE--AIRLDWTKRVNIVKSMAHALS 204
+V+L G C + ++I ++M G+L LR N E A+ L + + ++ A+
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 123
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIA 261
YL + +HRD+++ N L+ VADFG++RL+ D+ T AG + A
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTF--TAHAGAKFPIKWTA 178
Query: 262 PE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPS 315
PE LAY + K DV++FGV+ E+ M +PG ++P + +LL D R+
Sbjct: 179 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPG-----IDPS-QVYELLEKDYRMER 231
Query: 316 PIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 232 PEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 269
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 30/238 (12%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQ----LPSGKK--VALKKLHHSETELAFLESFQTEAH 139
+ D +K+ +G G +G V+ A+ LP K VA+K L E + + FQ EA
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAE 66
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR------------L 187
LL+ ++H++IV+ +G C + + ++++YMR G L LR+ + L
Sbjct: 67 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 126
Query: 188 DWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247
+ + + +A + YL VHRD+++ N L+ L + DFG++R ++S
Sbjct: 127 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Query: 248 ----SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVN 300
RT++ ++ PE T + DV+SFGVV E+ G+ P LS+
Sbjct: 184 YYRVGGRTMLPIR--WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE 239
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 138/287 (48%), Gaps = 44/287 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 277
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDE--AIRLDWTKRVNIVKSMAHALS 204
+V+L G C + ++I ++M G+L LR N E A+ L + + ++ A+
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 332
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIA 261
YL + +HR++++ N L+ VADFG++RL+ D+ T AG + A
Sbjct: 333 YLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTA 387
Query: 262 PE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPS 315
PE LAY + K DV++FGV+ E+ M +PG LS V +LL D R+
Sbjct: 388 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMER 440
Query: 316 PIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 441 PEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 478
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 44/287 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G +G VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 68
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILR--NDDE--AIRLDWTKRVNIVKSMAHALS 204
+V+L G C + ++I ++M G+L LR N E A+ L + + ++ A+
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL-----LYMATQISSAME 123
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIA 261
YL + +HRD+++ N L+ VADFG++RL+ D+ T AG + A
Sbjct: 124 YLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTA 178
Query: 262 PE-LAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPS 315
PE LAY + K DV++FGV+ E+ M +PG ++P + +LL D R+
Sbjct: 179 PESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPG-----IDPS-QVYELLEKDYRMER 231
Query: 316 PIDDQTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
P + +++ AC + P+ RP + Q F +T++Q
Sbjct: 232 PEGCPEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 269
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 218 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 274
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 333
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HR++++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 334 K---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 388
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 389 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 441
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 442 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 475
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 36/283 (12%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPS-GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
D +K+ +G G YG VY VA+K L E+ E F EA ++ +I+H N
Sbjct: 260 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKHPN 316
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+V+L G C + ++I ++M G+L LR + ++ + + ++ A+ YL
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK 375
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPE-L 264
+ +HR++++ N L+ VADFG++RL+ D+ T AG + APE L
Sbjct: 376 K---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPESL 430
Query: 265 AYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLL--DQRVPSPIDD 319
AY + K DV++FGV+ E+ M +PG LS V +LL D R+ P
Sbjct: 431 AYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV------YELLEKDYRMERPEGC 483
Query: 320 QTVIQDIILVSKIVFACLRSKPTSRP-MQRVSQEFLVRKTLYQ 361
+ +++ AC + P+ RP + Q F +T++Q
Sbjct: 484 PEKVYELMR------ACWQWNPSDRPSFAEIHQAF---ETMFQ 517
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNI 149
D + C+G G YG V+R G+ VA+K + + F E TE + +RH NI
Sbjct: 9 DITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE---TELYNTVMLRHENI 64
Query: 150 VKLYGFCLHKK----CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
+ + + ++LI Y GSL+ L + LD + IV S+A L++
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAH 120
Query: 206 LHCDCI-----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----G 255
LH + P+I HRD+ S NIL+ + +AD G+A ++HS S+N+ V G
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVG 179
Query: 256 THGYIAPELAYTMVLTE------KCDVYSFGVVALEV 286
T Y+APE+ + + + D+++FG+V EV
Sbjct: 180 TKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 126/255 (49%), Gaps = 16/255 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G+VY+ + VA+K L + ++F+ E +L + RH NI+ G+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY- 100
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
+ K + ++ ++ SL+ L + ++ + ++I + A + YLH +I+H
Sbjct: 101 MTKDNLAIVTQWCEGSSLYKHLHVQETKFQM--FQLIDIARQTAQGMDYLHAK---NIIH 155
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV--AGTHGYIAPE---LAYTMVLT 271
RD+ SNNI L+ L + DFG+A + S ++ V G+ ++APE + +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 272 EKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSK 331
+ DVYS+G+V E++ G P S +N + +I ++ + SP + + +
Sbjct: 216 FQSDVYSYGIVLYELMTGELP---YSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKR 272
Query: 332 IVFACLRSKPTSRPM 346
+V C++ RP+
Sbjct: 273 LVADCVKKVKEERPL 287
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 29/211 (13%)
Query: 96 CIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
C+G G YG V+R G+ VA+K + + F E TE + +RH NI+
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE---TELYNTVMLRHENILGFIAS 70
Query: 156 CLHKK----CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + ++LI Y GSL+ L + LD + IV S+A L++LH +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 126
Query: 212 -----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----GTHGYIA 261
P+I HRD+ S NIL+ + +AD G+A ++HS S+N+ V GT Y+A
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 262 PELAYTMVLTE------KCDVYSFGVVALEV 286
PE+ + + + D+++FG+V EV
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 104/211 (49%), Gaps = 29/211 (13%)
Query: 96 CIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
C+G G YG V+R G+ VA+K + + F E TE + +RH NI+
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE---TELYNTVMLRHENILGFIAS 99
Query: 156 CLHKK----CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + ++LI Y GSL+ L + LD + IV S+A L++LH +
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIF 155
Query: 212 -----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----GTHGYIA 261
P+I HRD+ S NIL+ + +AD G+A ++HS S+N+ V GT Y+A
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA-VMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 262 PELAYTMVLTE------KCDVYSFGVVALEV 286
PE+ + + + D+++FG+V EV
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 97 IGTGGYGSVYRAQLPSG---------KKVALKKLHHSETEL---AFLESFQTEAHLLSQI 144
+G+G YG V + +G KK K +S+ F E E LL +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NI+KL+ KK +L+ ++ G LF + N + D NI+K + +
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGIC 160
Query: 205 YLHCDCIPSIVHRDISSNNILL---NSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
YLH +IVHRDI NILL NS L + DFG++ D R + GT YIA
Sbjct: 161 YLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL-GTAYYIA 216
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ EKCDV+S GV+ +L G P
Sbjct: 217 PEVL-KKKYNEKCDVWSCGVIMYILLCGYPP 246
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 20/256 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHH-SETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+GTG +G V + VA+K + S +E F+E EA ++ + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
C ++ +F+I +YM G L LR + R + + + K + A+ YL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 142
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-GYIAPELAYTMVLTEKC 274
HRD+++ N L+N + V+DFG++R + D +V + + PE+ + K
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 275 DVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIV 333
D+++FGV+ E+ +G+ P + ++ + L P ++ V I+
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK--------VYTIM 254
Query: 334 FACLRSKPTSRPMQRV 349
++C K RP ++
Sbjct: 255 YSCWHEKADERPTFKI 270
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 79
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYLGTK 137
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 138 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 195 ESKFSVASDVWSFGVVLYELF 215
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 78
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 133
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 194 ESKFSVASDVWSFGVVLYELF 214
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 126/254 (49%), Gaps = 24/254 (9%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
+G+G +G V + VA+K + E ++ E FQ EA + ++ H +VK YG C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMI--KEGSMSEDEFFQ-EAQTMMKLSHPKLVKFYGVC 72
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
+ ++++ +Y+ G L LR+ + L+ ++ + + + +++L +H
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESH---QFIH 127
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELAYTMVLTEK 273
RD+++ N L++ L V+DFG+ R + D +V GT + APE+ + + K
Sbjct: 128 RDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV--GTKFPVKWSAPEVFHYFKYSSK 185
Query: 274 CDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP-IDDQTVIQDIILVSK 331
DV++FG++ EV +G+ P DL + N +++L R+ P + T+ Q
Sbjct: 186 SDVWAFGILMWEVFSLGKMPYDLYT--NSEVVLKVSQGHRLYRPHLASDTIYQ------- 236
Query: 332 IVFACLRSKPTSRP 345
I+++C P RP
Sbjct: 237 IMYSCWHELPEKRP 250
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 73
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 128
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 129 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 189 ESKFSVASDVWSFGVVLYELF 209
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 74
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 129
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 130 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 190 ESKFSVASDVWSFGVVLYELF 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 75
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 130
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 191 ESKFSVASDVWSFGVVLYELF 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 106
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 161
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 162 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 222 ESKFSVASDVWSFGVVLYELF 242
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 80
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 135
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 136 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 196 ESKFSVASDVWSFGVVLYELF 216
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 75
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 130
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 191 ESKFSVASDVWSFGVVLYELF 211
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 20/256 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHH-SETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+GTG +G V + VA+K + S +E F+E EA ++ + H +V+LYG
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 71
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
C ++ +F+I +YM G L LR + R + + + K + A+ YL +
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 126
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-GYIAPELAYTMVLTEKC 274
HRD+++ N L+N + V+DFG++R + D +V + + PE+ + K
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 275 DVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIV 333
D+++FGV+ E+ +G+ P + ++ + L P ++ V I+
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK--------VYTIM 238
Query: 334 FACLRSKPTSRPMQRV 349
++C K RP ++
Sbjct: 239 YSCWHEKADERPTFKI 254
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 81
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 136
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 137 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 197 ESKFSVASDVWSFGVVLYELF 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 82
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 137
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 138 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 198 ESKFSVASDVWSFGVVLYELF 218
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 20/256 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHH-SETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+GTG +G V + VA+K + S +E F+E EA ++ + H +V+LYG
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 87
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
C ++ +F+I +YM G L LR + R + + + K + A+ YL +
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 142
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-GYIAPELAYTMVLTEKC 274
HRD+++ N L+N + V+DFG++R + D +V + + PE+ + K
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 275 DVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIV 333
D+++FGV+ E+ +G+ P + ++ + L P ++ V I+
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK--------VYTIM 254
Query: 334 FACLRSKPTSRPMQRV 349
++C K RP ++
Sbjct: 255 YSCWHEKADERPTFKI 270
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 20/256 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHH-SETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+GTG +G V + VA+K + S +E F+E EA ++ + H +V+LYG
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 67
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
C ++ +F+I +YM G L LR + R + + + K + A+ YL +
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 122
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-GYIAPELAYTMVLTEKC 274
HRD+++ N L+N + V+DFG++R + D +V + + PE+ + K
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 275 DVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIV 333
D+++FGV+ E+ +G+ P + ++ + L P ++ V I+
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK--------VYTIM 234
Query: 334 FACLRSKPTSRPMQRV 349
++C K RP ++
Sbjct: 235 YSCWHEKADERPTFKI 250
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 14/198 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G V G KVA+K + + T AFL EA +++Q+RH N+V+L G
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFL----AEASVMTQLRHSNLVQLLGVI 74
Query: 157 LHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
+ +K ++++ +YM +GSL LR+ ++ L + + A+ YL + + V
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFV 130
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCD 275
HRD+++ N+L++ A V+DFG+ + SS + + APE + K D
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREAAFSTKSD 187
Query: 276 VYSFGVVALEVL-MGRHP 292
V+SFG++ E+ GR P
Sbjct: 188 VWSFGILLWEIYSFGRVP 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 20/256 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHH-SETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+GTG +G V + VA+K + S +E F+E EA ++ + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 72
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
C ++ +F+I +YM G L LR + R + + + K + A+ YL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 127
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-GYIAPELAYTMVLTEKC 274
HRD+++ N L+N + V+DFG++R + D +V + + PE+ + K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 275 DVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIV 333
D+++FGV+ E+ +G+ P + ++ + L P ++ V I+
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK--------VYTIM 239
Query: 334 FACLRSKPTSRPMQRV 349
++C K RP ++
Sbjct: 240 YSCWHEKADERPTFKI 255
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 93
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 148
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 209 ESKFSVASDVWSFGVVLYELF 229
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 93
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 148
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 149 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 209 ESKFSVASDVWSFGVVLYELF 229
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 120/256 (46%), Gaps = 20/256 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHH-SETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+GTG +G V + VA+K + S +E F+E EA ++ + H +V+LYG
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 78
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
C ++ +F+I +YM G L LR + R + + + K + A+ YL +
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 133
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-GYIAPELAYTMVLTEKC 274
HRD+++ N L+N + V+DFG++R + D +V + + PE+ + K
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 275 DVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIV 333
D+++FGV+ E+ +G+ P + ++ + L P ++ V I+
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK--------VYTIM 245
Query: 334 FACLRSKPTSRPMQRV 349
++C K RP ++
Sbjct: 246 YSCWHEKADERPTFKI 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 107/228 (46%), Gaps = 30/228 (13%)
Query: 93 IKYCIGTGGYGSVYRAQL----PSGKK--VALKKLHHSETELAFLESFQTEAHLLSQIRH 146
+K +G G +G V+ A+ P K VA+K L + + F EA LL+ ++H
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR--KDFHREAELLTNLQH 74
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR----------NDDEAIRLDWTKRVNIV 196
+IVK YG C+ + ++++YM+ G L LR + L ++ ++I
Sbjct: 75 EHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA 134
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ +A + YL VHRD+++ N L+ L + DFG++R ++S R G
Sbjct: 135 QQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV---GG 188
Query: 257 HG-----YIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSS 298
H ++ PE T + DV+S GVV E+ G+ P LS+
Sbjct: 189 HTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN 236
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 85 IVATEDFDIKYC----IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAH 139
IV+ D KY IG G G+VY A + +G++VA+++++ + E E
Sbjct: 12 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEIL 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
++ + ++ NIV L ++++ +Y+ GSL ++ +D + + +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCREC 125
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259
AL +LH + ++HRDI S+NILL + DFG + + S R+ + GT +
Sbjct: 126 LQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+APE+ K D++S G++A+E++ G P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 44/274 (16%)
Query: 97 IGTGGYGSVYRA-QLPSGK-----KVALKKLH---HSETELAFLESFQTEAHLLSQIRHR 147
+G G +G V A GK KVA+K L H++ + A + + +HL +H
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL---GQHE 102
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI-------RLDWTKRVNIVKSMA 200
NIV L G C H + +I +Y G L LR EA L+ ++ +A
Sbjct: 103 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 162
Query: 201 HALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
+++L +CI HRD+++ N+LL + A + DFG+AR + +DS+ +V G
Sbjct: 163 QGMAFLASKNCI----HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARL 216
Query: 258 --GYIAPELAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDL-LDQ 311
++APE + V T + DV+S+G++ E+ + +PG L++S K++ + Q
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ 276
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+P + +++Q AC +PT RP
Sbjct: 277 PAFAPKNIYSIMQ----------ACWALEPTHRP 300
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 78
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ A R+D K + + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQA--HAERIDHIKLLQYTSQICKGMEYL--- 133
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 194 ESKFSVASDVWSFGVVLYELF 214
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 44/274 (16%)
Query: 97 IGTGGYGSVYRA-QLPSGK-----KVALKKLH---HSETELAFLESFQTEAHLLSQIRHR 147
+G G +G V A GK KVA+K L H++ + A + + +HL +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL---GQHE 110
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR-------LDWTKRVNIVKSMA 200
NIV L G C H + +I +Y G L LR EA L+ ++ +A
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 201 HALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
+++L +CI HRD+++ N+LL + A + DFG+AR + +DS+ +V G
Sbjct: 171 QGMAFLASKNCI----HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNARL 224
Query: 258 --GYIAPELAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDL-LDQ 311
++APE + V T + DV+S+G++ E+ + +PG L++S K++ + Q
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQ 284
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+P + +++Q AC +PT RP
Sbjct: 285 PAFAPKNIYSIMQ----------ACWALEPTHRP 308
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 85 IVATEDFDIKYC----IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAH 139
IV+ D KY IG G G+VY A + +G++VA+++++ + E E
Sbjct: 12 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEIL 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
++ + ++ NIV L ++++ +Y+ GSL ++ +D + + +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCREC 125
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259
AL +LH + ++HRDI S+NILL + DFG + + S R+ + GT +
Sbjct: 126 LQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 182
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+APE+ K D++S G++A+E++ G P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 21/215 (9%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G V G KVA+K + + T AFL EA +++Q+RH N+V+L G
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFL----AEASVMTQLRHSNLVQLLGVI 255
Query: 157 LHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
+ +K ++++ +YM +GSL LR+ ++ L + + A+ YL + + V
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFV 311
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCD 275
HRD+++ N+L++ A V+DFG+ + SS + + APE + K D
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSD 368
Query: 276 VYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLL 309
V+SFG++ E+ GR P P+I L D++
Sbjct: 369 VWSFGILLWEIYSFGRVP-------YPRIPLKDVV 396
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 85 IVATEDFDIKYC----IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAH 139
IV+ D KY IG G G+VY A + +G++VA+++++ + E E
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEIL 70
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
++ + ++ NIV L ++++ +Y+ GSL ++ +D + + +
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCREC 126
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259
AL +LH + ++HRDI S+NILL + DFG + + S R+ + GT +
Sbjct: 127 LQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 183
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+APE+ K D++S G++A+E++ G P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 14/198 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G V G KVA+K + + T AFL EA +++Q+RH N+V+L G
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFL----AEASVMTQLRHSNLVQLLGVI 68
Query: 157 LHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
+ +K ++++ +YM +GSL LR+ ++ L + + A+ YL + + V
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFV 124
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCD 275
HRD+++ N+L++ A V+DFG+ + SS + + APE + K D
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSD 181
Query: 276 VYSFGVVALEVL-MGRHP 292
V+SFG++ E+ GR P
Sbjct: 182 VWSFGILLWEIYSFGRVP 199
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHS-ETELAFLESFQTEAHLLSQI 144
+ +DF I +GTG +G V+ + +G+ A+K L L +E E +LS +
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H I++++G + +F+I Y+ G LF +LR ++ R + AL
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLR---KSQRFPNPVAKFYAAEVCLALE 120
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
YLH I++RD+ NILL+ + DFG A+ + + + GT YIAPE+
Sbjct: 121 YLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT---YXLCGTPDYIAPEV 174
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
T + D +SFG++ E+L G P
Sbjct: 175 VSTKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 14/198 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G +G V G KVA+K + + T AFL EA +++Q+RH N+V+L G
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQAFL----AEASVMTQLRHSNLVQLLGVI 83
Query: 157 LHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
+ +K ++++ +YM +GSL LR+ ++ L + + A+ YL + + V
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSV-LGGDCLLKFSLDVCEAMEYLEGN---NFV 139
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCD 275
HRD+++ N+L++ A V+DFG+ + SS + + APE + K D
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSD 196
Query: 276 VYSFGVVALEVL-MGRHP 292
V+SFG++ E+ GR P
Sbjct: 197 VWSFGILLWEIYSFGRVP 214
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 78
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +++ GSL L+ E R+D K + + + YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 133
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 194 ESKFSVASDVWSFGVVLYELF 214
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 125/276 (45%), Gaps = 44/276 (15%)
Query: 97 IGTGGYGSVYRA-QLPSGK-----KVALKKLH---HSETELAFLESFQTEAHLLSQIRHR 147
+G G +G V A GK KVA+K L H++ + A + + +HL +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG---QHE 110
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
NIV L G C H + +I +Y G L LR + D I S A LH
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETD--PAFAIANSTASTRDLLH 168
Query: 208 CD----------CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+ +HRD+++ N+LL + A + DFG+AR + +DS+ +V G
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKGNA 226
Query: 258 ----GYIAPELAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDL-L 309
++APE + V T + DV+S+G++ E+ + +PG L++S K++ +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM 286
Query: 310 DQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
Q +P + +++Q AC +PT RP
Sbjct: 287 AQPAFAPKNIYSIMQ----------ACWALEPTHRP 312
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 85 IVATEDFDIKYC----IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAH 139
IV+ D KY IG G G+VY A + +G++VA+++++ + E E
Sbjct: 12 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEIL 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
++ + ++ NIV L ++++ +Y+ GSL ++ +D + + +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCREC 125
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259
AL +LH + ++HRDI S+NILL + DFG + + S R+ + GT +
Sbjct: 126 LQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYW 182
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+APE+ K D++S G++A+E++ G P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 104/200 (52%), Gaps = 16/200 (8%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G G V A + SG++VA+K + EL F E ++ +H N+V++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-----NEVVIMRDYQHFNVVEM 107
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
Y L + ++++ ++++ G+L I+ +RL+ + + +++ AL+YLH
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHAQ--- 160
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
++HRDI S++ILL ++DFG + D R + GT ++APE+ +
Sbjct: 161 GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYAT 220
Query: 273 KCDVYSFGVVALEVLMGRHP 292
+ D++S G++ +E++ G P
Sbjct: 221 EVDIWSLGIMVIEMVDGEPP 240
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
DF+ +G G +G V +A+ + A+KK+ H+E +L+ + +E LL+ + H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQY 63
Query: 149 IVKLYGFCLH-------------KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI 195
+V+ Y L K +F+ +Y G+L+ ++ +++ + D R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR--L 121
Query: 196 VKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH----------- 244
+ + ALSY+H I+HRD+ NI ++ + DFG+A+ +H
Sbjct: 122 FRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 245 ---SDSSNRTVVAGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVN 300
S N T GT Y+A E L T EK D+YS G++ E++ G ++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL 238
Query: 301 PKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQR 348
K+ + + P DD + + KI+ + P RP R
Sbjct: 239 KKLRSVSI---EFPPDFDDNKMKVE----KKIIRLLIDHDPNKRPGAR 279
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 75
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 130
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HRD+++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 131 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 191 ESKFSVASDVWSFGVVLYELF 211
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 121/257 (47%), Gaps = 22/257 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHH-SETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+GTG +G V + VA+K + S +E F+E EA ++ + H +V+LYG
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIE----EAKVMMNLSHEKLVQLYGV 72
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
C ++ +F+I +YM G L LR + R + + + K + A+ YL +
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLR--EMRHRFQTQQLLEMCKDVCEAMEYLES---KQFL 127
Query: 216 HRDISSNNILLNSKLEAFVADFGVARLLHSD--SSNRTVVAGTHGYIAPELAYTMVLTEK 273
HRD+++ N L+N + V+DFG++R + D +S+R + PE+ + K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR-WSPPEVLMYSKFSSK 186
Query: 274 CDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKI 332
D+++FGV+ E+ +G+ P + ++ + L P ++ V I
Sbjct: 187 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK--------VYTI 238
Query: 333 VFACLRSKPTSRPMQRV 349
+++C K RP ++
Sbjct: 239 MYSCWHEKADERPTFKI 255
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 26/271 (9%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
+ ++ ED + IG G +G V+ +L + + K F EA +L
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H NIV+L G C K+ ++++ + ++ G LR E RL + +V A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAG 225
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---- 258
+ YL C +HRD+++ N L+ K ++DFG++R V A + G
Sbjct: 226 MEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-----EEADGVXAASGGLRQV 277
Query: 259 ---YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVP 314
+ APE + + DV+SFG++ E +G P LS+ + + R+P
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK--GGRLP 335
Query: 315 SPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
P + D + +++ C +P RP
Sbjct: 336 CP----ELCPDAVF--RLMEQCWAYEPGQRP 360
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 17/214 (7%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKL-----HHSETELAFLESFQTEAH 139
+ E + I +G GG +VY A+ KVA+K + ET L+ F+ E H
Sbjct: 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEET----LKRFEREVH 63
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
SQ+ H+NIV + C +L+ +Y+ +L + + L +N +
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQI 120
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV-VAGTHG 258
+ + H IVHRDI NIL++S + DFG+A+ L S +T V GT
Sbjct: 121 LDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ 177
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y +PE A E D+YS G+V E+L+G P
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 14/214 (6%)
Query: 84 MIVATEDFDIKYC----IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEA 138
+IV+ D KY IG G G+VY A + +G++VA+++++ + E E
Sbjct: 12 IIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEI 69
Query: 139 HLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS 198
++ + ++ NIV L ++++ +Y+ GSL ++ +D + + +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRE 125
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258
AL +LH + ++HR+I S+NILL + DFG + + S R+ + GT
Sbjct: 126 CLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPY 182
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
++APE+ K D++S G++A+E++ G P
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 26/271 (9%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
+ ++ ED + IG G +G V+ +L + + K F EA +L
Sbjct: 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILK 167
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H NIV+L G C K+ ++++ + ++ G LR E RL + +V A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT--EGARLRVKTLLQMVGDAAAG 225
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---- 258
+ YL C +HRD+++ N L+ K ++DFG++R V A + G
Sbjct: 226 MEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-----EEADGVYAASGGLRQV 277
Query: 259 ---YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVP 314
+ APE + + DV+SFG++ E +G P LS+ + + R+P
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEK--GGRLP 335
Query: 315 SPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
P + D + +++ C +P RP
Sbjct: 336 CP----ELCPDAVF--RLMEQCWAYEPGQRP 360
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 97 IGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +GSV Q +G+ VA+KKL HS E L F+ E +L ++H NIVK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE--HLRDFEREIEILKSLQHDNIVK 76
Query: 152 LYGFCLH--KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C ++ + LI +Y+ GSL L+ E R+D K + + + YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE--RIDHIKLLQYTSQICKGMEYL--- 131
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAY 266
+HR++++ NIL+ ++ + DFG+ ++L D V + APE
Sbjct: 132 GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 267 TMVLTEKCDVYSFGVVALEVL 287
+ DV+SFGVV E+
Sbjct: 192 ESKFSVASDVWSFGVVLYELF 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 29/234 (12%)
Query: 97 IGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G+G +G+VY+ +P G+ V A+K L+ + A +E F EA +++ + H ++V+
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDHPHLVR 104
Query: 152 LYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR----LDWTKRVNIVKSMAHALSYLH 207
L G CL + L+ + M G L + + I L+W V I K M +
Sbjct: 105 LLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMMYLEER-- 159
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYIAPELA 265
+VHRD+++ N+L+ S + DFG+ARLL D G ++A E
Sbjct: 160 -----RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 214
Query: 266 YTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLD--QRVPSP 316
+ T + DV+S+GV E++ G P D + P + DLL+ +R+P P
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI----PTREIPDLLEKGERLPQP 264
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 129/278 (46%), Gaps = 48/278 (17%)
Query: 97 IGTGGYGSVYRA-QLPSGK-----KVALKKLH---HSETELAFLESFQTEAHLLSQIRHR 147
+G G +G V A GK KVA+K L H++ + A + + +HL +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG---QHE 110
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRV-----------NIV 196
NIV L G C H + +I +Y G L LR + D + +
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFS 170
Query: 197 KSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG 255
+A +++L +CI HRD+++ N+LL + A + DFG+AR + +DS+ +V G
Sbjct: 171 SQVAQGMAFLASKNCI----HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--YIVKG 224
Query: 256 TH----GYIAPELAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDL 308
++APE + V T + DV+S+G++ E+ + +PG L++S K++
Sbjct: 225 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 284
Query: 309 -LDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ Q +P + +++Q AC +PT RP
Sbjct: 285 QMAQPAFAPKNIYSIMQ----------ACWALEPTHRP 312
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 114/234 (48%), Gaps = 29/234 (12%)
Query: 97 IGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G+G +G+VY+ +P G+ V A+K L+ + A +E F EA +++ + H ++V+
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVE-FMDEALIMASMDHPHLVR 81
Query: 152 LYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR----LDWTKRVNIVKSMAHALSYLH 207
L G CL + L+ + M G L + + I L+W V I K M +
Sbjct: 82 LLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC--VQIAKGMMYLEER-- 136
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYIAPELA 265
+VHRD+++ N+L+ S + DFG+ARLL D G ++A E
Sbjct: 137 -----RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 266 YTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLD--QRVPSP 316
+ T + DV+S+GV E++ G P D + P + DLL+ +R+P P
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI----PTREIPDLLEKGERLPQP 241
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 21/218 (9%)
Query: 89 EDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELA------FLESFQTEAHLL 141
+ +D K IG G V R +G + A+K + + L+ E+ + E H+L
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 142 SQIR-HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMA 200
Q+ H +I+ L MFL++ MR+G LF L E + L + +I++S+
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL---TEKVALSEKETRSIMRSLL 210
Query: 201 HALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYI 260
A+S+LH + +IVHRD+ NILL+ ++ ++DFG + L R + GT GY+
Sbjct: 211 EAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRE-LCGTPGYL 266
Query: 261 APE-LAYTMVLT-----EKCDVYSFGVVALEVLMGRHP 292
APE L +M T ++ D+++ GV+ +L G P
Sbjct: 267 APEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 18/261 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
+G G YG VY+A+ G+ VALK++ + + E LL ++ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK--RVNIVKSMAHALSYLHCDCIPSI 214
++C+ L++++M + L +L + ++ K +++ +AH + I
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-------RI 140
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAYTMVLTEK 273
+HRD+ N+L+NS +ADFG+AR + T T Y AP+ L + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 274 CDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSK 331
D++S G + E++ G+ PG PKI I P+P + +Q++ L +
Sbjct: 201 VDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI----LGTPNP-REWPQVQELPLWKQ 255
Query: 332 IVFACLRSKPTSRPMQRVSQE 352
F KP S + QE
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQE 276
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 18/261 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
+G G YG VY+A+ G+ VALK++ + + E LL ++ H NIV L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK--RVNIVKSMAHALSYLHCDCIPSI 214
++C+ L++++M + L +L + ++ K +++ +AH + I
Sbjct: 89 HSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH-------RI 140
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAYTMVLTEK 273
+HRD+ N+L+NS +ADFG+AR + T T Y AP+ L + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 274 CDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSK 331
D++S G + E++ G+ PG PKI I P+P + +Q++ L +
Sbjct: 201 VDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI----LGTPNP-REWPQVQELPLWKQ 255
Query: 332 IVFACLRSKPTSRPMQRVSQE 352
F KP S + QE
Sbjct: 256 RTFQVFEKKPWSSIIPGFCQE 276
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 27/240 (11%)
Query: 91 FDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI-RHRN 148
F++ +G G YG VY+ + + +G+ A+K + + E E + E ++L + HRN
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSHHRN 82
Query: 149 IVKLYGFCLHKKC------MFLIYKYMRRGSLFCILRN-DDEAIRLDWTKRVNIVKSMAH 201
I YG + K ++L+ ++ GS+ +++N ++ +W I + +
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWI--AYICREILR 140
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
LS+LH ++HRDI N+LL E + DFGV+ L R GT ++A
Sbjct: 141 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 197
Query: 262 PELAY-----TMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
PE+ K D++S G+ A+E+ G P L ++P L L R P+P
Sbjct: 198 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP---LCDMHPMRAL--FLIPRNPAP 252
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 29/211 (13%)
Query: 96 CIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
C+G G YG V+R L G+ VA+K + + F E TE + +RH NI+
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE---TEIYNTVLLRHDNILGFIAS 70
Query: 156 CLHKKC----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + ++LI Y GSL+ L+ L + + S A L++LH +
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHL----ALRLAVSAACGLAHLHVEIF 126
Query: 212 -----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----GTHGYIA 261
P+I HRD S N+L+ S L+ +AD G+A ++HS S+ + GT Y+A
Sbjct: 127 GTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-VMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 262 PELAYTMVLTE------KCDVYSFGVVALEV 286
PE+ + T+ D+++FG+V E+
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 22/253 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G V+ + KVA+K + E F EA ++ ++ H +V+LYG C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L + + L++++M G L LR + + + + ++YL C ++H
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELAYTMVLTEK 273
RD+++ N L+ V+DFG+ R + D T GT + +PE+ + K
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSK 187
Query: 274 CDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKI 332
DV+SFGV+ EV G+ P + S N +++ R+ P T V +I
Sbjct: 188 SDVWSFGVLMWEVFSEGKIPYENRS--NSEVVEDISTGFRLYKPRLAST------HVYQI 239
Query: 333 VFACLRSKPTSRP 345
+ C R +P RP
Sbjct: 240 MNHCWRERPEDRP 252
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G G V A + SGK VA+KK+ EL F E ++ +H N+V++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 213
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
Y L ++++ +++ G+L I+ + R++ + + ++ ALS LH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ--- 266
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 267 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 273 KCDVYSFGVVALEVLMGRHP 292
+ D++S G++ +E++ G P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 57/287 (19%)
Query: 97 IGTGGYGSVYRA-QLPSGK-----KVALKKLH---HSETELAFLESFQTEAHLLSQIRHR 147
+G G +G V A GK KVA+K L H++ + A + + +HL +H
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL---GQHE 95
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI--------------------RL 187
NIV L G C H + +I +Y G L LR EA+ L
Sbjct: 96 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 188 DWTKRVNIVKSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246
+ ++ +A +++L +CI HRD+++ N+LL + A + DFG+AR + +D
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASKNCI----HRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 247 SSNRTVVAGTH----GYIAPELAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSV 299
S+ +V G ++APE + V T + DV+S+G++ E+ + +PG L++S
Sbjct: 212 SN--YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 269
Query: 300 NPKIMLIDL-LDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
K++ + Q +P + +++Q AC +PT RP
Sbjct: 270 FYKLVKDGYQMAQPAFAPKNIYSIMQ----------ACWALEPTHRP 306
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 153 YGFCLHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 151
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS----NRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ N+T ++A E T
Sbjct: 152 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 82 QEMIVATEDFDIKY--CIGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQ 135
Q +++ + + IG G +G VY L GKK+ A+K L+ T++ + F
Sbjct: 13 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFL 71
Query: 136 TEAHLLSQIRHRNIVKLYGFCLHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
TE ++ H N++ L G CL + ++ YM+ G L +RN+ + +
Sbjct: 72 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIG 129
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS----SNR 250
+A + YL VHRD+++ N +L+ K VADFG+AR ++ N+
Sbjct: 130 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 186
Query: 251 TVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
T ++A E T T K DV+SFGV+ E++ P
Sbjct: 187 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 16/200 (8%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G G V A + +GK+VA+KK+ EL F E ++ H N+V +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-----NEVVIMRDYHHDNVVDM 107
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
Y L ++++ +++ G+L I+ + R++ + + S+ ALSYLH
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQ--- 160
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
++HRDI S++ILL S ++DFG + + R + GT ++APE+ +
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 273 KCDVYSFGVVALEVLMGRHP 292
+ D++S G++ +E++ G P
Sbjct: 221 EVDIWSLGIMVIEMIDGEPP 240
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G G V A + SGK VA+KK+ EL F E ++ +H N+V++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 91
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
Y L ++++ +++ G+L I+ + R++ + + ++ ALS LH
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ--- 144
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 145 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 273 KCDVYSFGVVALEVLMGRHP 292
+ D++S G++ +E++ G P
Sbjct: 205 EVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G G V A + SGK VA+KK+ EL F E ++ +H N+V++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 93
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
Y L ++++ +++ G+L I+ + R++ + + ++ ALS LH
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ--- 146
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 147 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 273 KCDVYSFGVVALEVLMGRHP 292
+ D++S G++ +E++ G P
Sbjct: 207 EVDIWSLGIMVIEMVDGEPP 226
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 153 YGFCLHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 152
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS----SNRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ N+T ++A E T
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 153 YGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 170
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS----SNRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ N+T ++A E T
Sbjct: 171 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 82 QEMIVATEDFDIKY--CIGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQ 135
Q +++ + + IG G +G VY L GKK+ A+K L+ T++ + F
Sbjct: 40 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFL 98
Query: 136 TEAHLLSQIRHRNIVKLYGFCLHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
TE ++ H N++ L G CL + ++ YM+ G L +RN+ + +
Sbjct: 99 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIG 156
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS----SNR 250
+A + YL VHRD+++ N +L+ K VADFG+AR ++ N+
Sbjct: 157 FGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNK 213
Query: 251 TVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
T ++A E T T K DV+SFGV+ E++ P
Sbjct: 214 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 122
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 153 YGFCLHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 149
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS----SNRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ N+T ++A E T
Sbjct: 150 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 153 YGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 150
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS----SNRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ N+T ++A E T
Sbjct: 151 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G G V A + SGK VA+KK+ EL F E ++ +H N+V++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 136
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
Y L ++++ +++ G+L I+ + R++ + + ++ ALS LH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ--- 189
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 190 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 273 KCDVYSFGVVALEVLMGRHP 292
+ D++S G++ +E++ G P
Sbjct: 250 EVDIWSLGIMVIEMVDGEPP 269
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 153 YGFCLHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYLASK-- 151
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS----SNRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ N+T ++A E T
Sbjct: 152 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 126/288 (43%), Gaps = 44/288 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
DF+ +G G +G V +A+ + A+KK+ H+E +L+ + +E LL+ + H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVMLLASLNHQY 63
Query: 149 IVKLYGFCLH-------------KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI 195
+V+ Y L K +F+ +Y +L+ ++ +++ + D R +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR--L 121
Query: 196 VKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH----------- 244
+ + ALSY+H I+HRD+ NI ++ + DFG+A+ +H
Sbjct: 122 FRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 245 ---SDSSNRTVVAGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVN 300
S N T GT Y+A E L T EK D+YS G++ E++ G ++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL 238
Query: 301 PKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQR 348
K+ + + P DD + + KI+ + P RP R
Sbjct: 239 KKLRSVSI---EFPPDFDDNKMKVE----KKIIRLLIDHDPNKRPGAR 279
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G G V A + SGK VA+KK+ EL F E ++ +H N+V++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 82
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
Y L ++++ +++ G+L I+ + R++ + + ++ ALS LH
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ--- 135
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 136 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 273 KCDVYSFGVVALEVLMGRHP 292
+ D++S G++ +E++ G P
Sbjct: 196 EVDIWSLGIMVIEMVDGEPP 215
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 153 YGFCLHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYLASK-- 152
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS----SNRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ N+T ++A E T
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 54/282 (19%)
Query: 97 IGTGGYGSVYRA-QLPSGK-----KVALKKLH---HSETELAFLESFQTEAHLLSQIRHR 147
+G G +G V A GK KVA+K L H++ + A + + +HL +H
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL---GQHE 110
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR---------------NDDEAIRLDWTKR 192
NIV L G C H + +I +Y G L LR N +E +L
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE--QLSSRDL 168
Query: 193 VNIVKSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251
++ +A +++L +CI HRD+++ N+LL + A + DFG+AR + +DS+
Sbjct: 169 LHFSSQVAQGMAFLASKNCI----HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN--Y 222
Query: 252 VVAGTH----GYIAPELAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIM 304
+V G ++APE + V T + DV+S+G++ E+ + +PG L++S K++
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV 282
Query: 305 LIDL-LDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ Q +P + +++Q AC +PT RP
Sbjct: 283 KDGYQMAQPAFAPKNIYSIMQ----------ACWALEPTHRP 314
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 97/205 (47%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 153 YGFCLHKK-CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYLASK-- 147
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS----SNRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ N+T ++A E T
Sbjct: 148 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 15/208 (7%)
Query: 84 MIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHH-SETELAFLESFQTEAHLLS 142
M++ + IG+G +G V+ + KVA+K + S +E F+E EA ++
Sbjct: 22 MVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE----EAEVMM 77
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
++ H +V+LYG CL + + L++++M G L LR + + + +
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEG 135
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GY 259
++YL C ++HRD+++ N L+ V+DFG+ R + D T GT +
Sbjct: 136 MAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKW 190
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVL 287
+PE+ + K DV+SFGV+ EV
Sbjct: 191 ASPEVFSFSRYSSKSDVWSFGVLMWEVF 218
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G V+ + KVA+K + E F EA ++ ++ H +V+LYG C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L + + L++++M G L LR + + + + ++YL C ++H
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VIH 124
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELAYTMVLTEK 273
RD+++ N L+ V+DFG+ R + D T GT + +PE+ + K
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSK 182
Query: 274 CDVYSFGVVALEVL 287
DV+SFGV+ EV
Sbjct: 183 SDVWSFGVLMWEVF 196
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 37/222 (16%)
Query: 97 IGTGGYGSVYRAQLPS------GKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
IG G +G V++A+ P VA+K L E FQ EA L+++ + NIV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKE-EASADMQADFQREAALMAEFDNPNIV 113
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSL-----------FCILRNDDEAIR----------LDW 189
KL G C K M L+++YM G L C L + D + R L
Sbjct: 114 KLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSC 173
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+++ I + +A ++YL VHRD+++ N L+ + +ADFG++R ++ S++
Sbjct: 174 AEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIY--SAD 228
Query: 250 RTVVAGTHG----YIAPELAYTMVLTEKCDVYSFGVVALEVL 287
G ++ PE + T + DV+++GVV E+
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G V+ + KVA+K + E F EA ++ ++ H +V+LYG C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L + + L++++M G L LR + + + + ++YL C ++H
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELAYTMVLTEK 273
RD+++ N L+ V+DFG+ R + D T GT + +PE+ + K
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 274 CDVYSFGVVALEVL 287
DV+SFGV+ EV
Sbjct: 185 SDVWSFGVLMWEVF 198
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 114/237 (48%), Gaps = 12/237 (5%)
Query: 84 MIVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
M + +DF+ +G G G V++ + PSG +A +KL H E + A E +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLH 59
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
+ IV YG + + ++M GSL +L+ +A R+ + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
L+YL I+HRD+ +NIL+NS+ E + DFGV+ L +N V GT Y++P
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSP 172
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRH---PGDLLSSVNPKIMLIDLLDQRVPSP 316
E + + D++S G+ +E+ +GR+ P D P + + +LLD V P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEP 229
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G G V A + SGK VA+KK+ EL F E ++ +H N+V++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-----NEVVIMRDYQHENVVEM 86
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
Y L ++++ +++ G+L I+ + R++ + + ++ ALS LH
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHAQ--- 139
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
++HRDI S++ILL ++DFG + + R + GT ++APEL +
Sbjct: 140 GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 273 KCDVYSFGVVALEVLMGRHP 292
+ D++S G++ +E++ G P
Sbjct: 200 EVDIWSLGIMVIEMVDGEPP 219
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 122
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 30/284 (10%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQL--PSGKKVA-----LKKLHHSETELAFLESFQTE 137
++ +D + +G G +G V R + PSGK V+ LK S+ E ++ F E
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIRE 65
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
+ + + HRN+++LYG L M ++ + GSL LR L R +
Sbjct: 66 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 122
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + YL +HRD+++ N+LL ++ + DFG+ R L + + V H
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--YVMQEH 177
Query: 258 -----GYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ 311
+ APE T + D + FGV E+ G+ P L+ + + ID +
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILHKIDKEGE 236
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLV 355
R+P P D QDI ++ C KP RP ++FL+
Sbjct: 237 RLPRPED---CPQDIY---NVMVQCWAHKPEDRPTFVALRDFLL 274
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQL--PSGKKVA-----LKKLHHSETELAFLESFQTE 137
++ +D + +G G +G V R + PSGK V+ LK S+ E ++ F E
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIRE 71
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
+ + + HRN+++LYG L M ++ + GSL LR L R +
Sbjct: 72 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 128
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + YL +HRD+++ N+LL ++ + DFG+ R L + + V H
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--XVMQEH 183
Query: 258 -----GYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIML--IDLL 309
+ APE T + D + FGV E+ G+ P +N +L ID
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKE 240
Query: 310 DQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLV 355
+R+P P D QDI ++ C KP RP ++FL+
Sbjct: 241 GERLPRPED---CPQDIY---NVMVQCWAHKPEDRPTFVALRDFLL 280
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 75 YDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETE-LAFLE 132
+DGR+ I+ +G G +G V + +G KVA+K L+ + L +
Sbjct: 9 HDGRVKIGHYILGD-------TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVG 61
Query: 133 SFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLF-CILRNDDEAIRLDWTK 191
+ E L RH +I+KLY +F++ +Y+ G LF I +N RLD +
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG----RLDEKE 117
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251
+ + + + Y H + VHRD+ N+LL++ + A +ADFG++ ++ SD
Sbjct: 118 SRRLFQQILSGVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLR 173
Query: 252 VVAGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGRHPGD 294
G+ Y APE ++ + + D++S GV+ +L G P D
Sbjct: 174 XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQL--PSGKKVA-----LKKLHHSETELAFLESFQTE 137
++ +D + +G G +G V R + PSGK V+ LK S+ E ++ F E
Sbjct: 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIRE 71
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
+ + + HRN+++LYG L M ++ + GSL LR L R +
Sbjct: 72 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 128
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + YL +HRD+++ N+LL ++ + DFG+ R L + + V H
Sbjct: 129 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--YVMQEH 183
Query: 258 -----GYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIML--IDLL 309
+ APE T + D + FGV E+ G+ P +N +L ID
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP---WIGLNGSQILHKIDKE 240
Query: 310 DQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLV 355
+R+P P D QDI ++ C KP RP ++FL+
Sbjct: 241 GERLPRPED---CPQDIY---NVMVQCWAHKPEDRPTFVALRDFLL 280
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 122
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 120
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 121 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 207
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 30/284 (10%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQL--PSGKKVA-----LKKLHHSETELAFLESFQTE 137
++ +D + +G G +G V R + PSGK V+ LK S+ E ++ F E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIRE 61
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
+ + + HRN+++LYG L M ++ + GSL LR L R +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + YL +HRD+++ N+LL ++ + DFG+ R L + + V H
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--XVMQEH 173
Query: 258 -----GYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ 311
+ APE T + D + FGV E+ G+ P L+ + + ID +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILHKIDKEGE 232
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLV 355
R+P P D QDI ++ C KP RP ++FL+
Sbjct: 233 RLPRPED---CPQDIY---NVMVQCWAHKPEDRPTFVALRDFLL 270
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 22/253 (8%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G V+ + KVA+K + E F EA ++ ++ H +V+LYG C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L + + L+ ++M G L LR + + + + ++YL C ++H
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLEEAC---VIH 127
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELAYTMVLTEK 273
RD+++ N L+ V+DFG+ R + D T GT + +PE+ + K
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSK 185
Query: 274 CDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKI 332
DV+SFGV+ EV G+ P + S N +++ R+ P T V +I
Sbjct: 186 SDVWSFGVLMWEVFSEGKIPYENRS--NSEVVEDISTGFRLYKPRLAST------HVYQI 237
Query: 333 VFACLRSKPTSRP 345
+ C R +P RP
Sbjct: 238 MNHCWRERPEDRP 250
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 16/229 (6%)
Query: 89 EDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+DF+ +G G G V++ + PSG +A +KL H E + A E +L +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSP 67
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
IV YG + + ++M GSL +L+ +A R+ + ++ L+YL
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NIL+NS+ E + DFGV+ L + +N V GT Y++PE
Sbjct: 125 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV--GTRSYMSPERLQG 180
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
+ + D++S G+ +E+ +GR+P P + + +LLD V P
Sbjct: 181 THYSVQSDIWSMGLSLVEMAVGRYP-------RPPMAIFELLDYIVNEP 222
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 30/284 (10%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQL--PSGKKVA-----LKKLHHSETELAFLESFQTE 137
++ +D + +G G +G V R + PSGK V+ LK S+ E ++ F E
Sbjct: 8 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIRE 65
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
+ + + HRN+++LYG L M ++ + GSL LR L R +
Sbjct: 66 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 122
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + YL +HRD+++ N+LL ++ + DFG+ R L + + V H
Sbjct: 123 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--YVMQEH 177
Query: 258 -----GYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ 311
+ APE T + D + FGV E+ G+ P L+ + + ID +
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILHKIDKEGE 236
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLV 355
R+P P D QDI ++ C KP RP ++FL+
Sbjct: 237 RLPRPED---CPQDIY---NVMVQCWAHKPEDRPTFVALRDFLL 274
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 122
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 123 GI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 122
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 123 GI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 122
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 123 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 122
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 123 GI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 30/284 (10%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQL--PSGKKVA-----LKKLHHSETELAFLESFQTE 137
++ +D + +G G +G V R + PSGK V+ LK S+ E ++ F E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIRE 61
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
+ + + HRN+++LYG L M ++ + GSL LR L R +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + YL +HRD+++ N+LL ++ + DFG+ R L + + V H
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--YVMQEH 173
Query: 258 -----GYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ 311
+ APE T + D + FGV E+ G+ P L+ + + ID +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILHKIDKEGE 232
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLV 355
R+P P D QDI ++ C KP RP ++FL+
Sbjct: 233 RLPRPED---CPQDIY---NVMVQCWAHKPEDRPTFVALRDFLL 270
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 92/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 82 QEMIVATEDFDIKY--CIGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQ 135
Q +++ + + IG G +G VY L GKK+ A+K L+ T++ + F
Sbjct: 80 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFL 138
Query: 136 TEAHLLSQIRHRNIVKLYGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
TE ++ H N++ L G CL + ++ YM+ G L +RN+ + +
Sbjct: 139 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIG 196
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS---DS-SNR 250
+A + +L VHRD+++ N +L+ K VADFG+AR ++ DS N+
Sbjct: 197 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 253
Query: 251 TVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
T ++A E T T K DV+SFGV+ E++ P
Sbjct: 254 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H N
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 66
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 67 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELAY 266
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 124 I---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 267 TMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 9/209 (4%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
ED+D+ +G G YG V A ++ K+ + + E+ + E + + H N
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN 65
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 66 VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELAY 266
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 123 I---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 267 TMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
E ++I +G G +G VY+A+ +A K+ +++E LE + E +L+ H
Sbjct: 10 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE-EELEDYIVEIEILATCDHP 68
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV-KSMAHALSYL 206
IVKL G H ++++ ++ G++ I+ D + ++ +V + M AL++L
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFL 125
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H I+HRD+ + N+L+ + + +ADFGV+ R GT ++APE+
Sbjct: 126 HSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVM 182
Query: 267 TMVLTE-----KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPS 315
+ + K D++S G+ +E+ P +NP +L+ + P+
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMAQIEPPH---HELNPMRVLLKIAKSDPPT 233
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 82 QEMIVATEDFDIKY--CIGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQ 135
Q +++ + + IG G +G VY L GKK+ A+K L+ T++ + F
Sbjct: 21 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFL 79
Query: 136 TEAHLLSQIRHRNIVKLYGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
TE ++ H N++ L G CL + ++ YM+ G L +RN+ + +
Sbjct: 80 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIG 137
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS---DS-SNR 250
+A + +L VHRD+++ N +L+ K VADFG+AR ++ DS N+
Sbjct: 138 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 194
Query: 251 TVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
T ++A E T T K DV+SFGV+ E++ P
Sbjct: 195 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 125/284 (44%), Gaps = 30/284 (10%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQL--PSGKKVA-----LKKLHHSETELAFLESFQTE 137
++ +D + +G G +G V R + PSGK V+ LK S+ E ++ F E
Sbjct: 4 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA--MDDFIRE 61
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
+ + + HRN+++LYG L M ++ + GSL LR L R +
Sbjct: 62 VNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAV-- 118
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + YL +HRD+++ N+LL ++ + DFG+ R L + + V H
Sbjct: 119 QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--YVMQEH 173
Query: 258 -----GYIAPELAYTMVLTEKCDVYSFGVVALEVLM-GRHPGDLLSSVNPKIMLIDLLDQ 311
+ APE T + D + FGV E+ G+ P L+ + + ID +
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-SQILHKIDKEGE 232
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLV 355
R+P P D QDI ++ C KP RP ++FL+
Sbjct: 233 RLPRPED---CPQDIY---NVMVQCWAHKPEDRPTFVALRDFLL 270
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 112/234 (47%), Gaps = 16/234 (6%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
E ++I +G G +G VY+A+ +A K+ +++E LE + E +L+ H
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE-EELEDYIVEIEILATCDHP 76
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV-KSMAHALSYL 206
IVKL G H ++++ ++ G++ I+ D + ++ +V + M AL++L
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFL 133
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H I+HRD+ + N+L+ + + +ADFGV+ R GT ++APE+
Sbjct: 134 HSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVM 190
Query: 267 TMVLTE-----KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPS 315
+ + K D++S G+ +E+ P +NP +L+ + P+
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEPPH---HELNPMRVLLKIAKSDPPT 241
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
DF+ +G G +G V +A+ + A+KK+ H+E +L+ + +E LL+ + H+
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS---TILSEVXLLASLNHQY 63
Query: 149 IVKLYGFCLH-------------KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI 195
+V+ Y L K +F+ +Y +L+ ++ +++ + D R +
Sbjct: 64 VVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR--L 121
Query: 196 VKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH----------- 244
+ + ALSY+H I+HR++ NI ++ + DFG+A+ +H
Sbjct: 122 FRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 245 ---SDSSNRTVVAGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVN 300
S N T GT Y+A E L T EK D YS G++ E + G ++
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNIL 238
Query: 301 PKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRV 349
K+ + + P DD + KI+ + P RP R
Sbjct: 239 KKLRSVSI---EFPPDFDDNKXKVE----KKIIRLLIDHDPNKRPGART 280
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 153 YGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + +L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK-- 150
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHS---DS-SNRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ DS N+T ++A E T
Sbjct: 151 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 105/222 (47%), Gaps = 17/222 (7%)
Query: 82 QEMIVATEDFDIKY--CIGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQ 135
Q +++ + + IG G +G VY L GKK+ A+K L+ T++ + F
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFL 80
Query: 136 TEAHLLSQIRHRNIVKLYGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
TE ++ H N++ L G CL + ++ YM+ G L +RN+ + +
Sbjct: 81 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIG 138
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS---DS-SNR 250
+A + +L VHRD+++ N +L+ K VADFG+AR ++ DS N+
Sbjct: 139 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 195
Query: 251 TVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
T ++A E T T K DV+SFGV+ E++ P
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Query: 82 QEMIVATEDFDIKY--CIGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQ 135
Q +++ + + IG G +G VY L GKK+ A+K L+ T++ + F
Sbjct: 26 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFL 84
Query: 136 TEAHLLSQIRHRNIVKLYGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
TE ++ H N++ L G CL + ++ YM+ G L +RN+ + +
Sbjct: 85 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVK--DLIG 142
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHS---DS-SNR 250
+A + +L VHRD+++ N +L+ K VADFG+AR ++ DS N+
Sbjct: 143 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK 199
Query: 251 TVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
T ++A E T T K DV+SFGV+ E++
Sbjct: 200 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 97 IGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY L GKK+ A+K L+ T++ + F TE ++ H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 153 YGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G CL + ++ YM+ G L +RN+ + + +A + +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFLASK-- 152
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHS---DS-SNRTVVAGTHGYIAPELAYT 267
VHRD+++ N +L+ K VADFG+AR ++ DS N+T ++A E T
Sbjct: 153 -KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
T K DV+SFGV+ E++ P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 13/194 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG+G +G V+ + KVA+K + E F EA ++ ++ H +V+LYG C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE---EDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 157 LHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVH 216
L + + L++++M G L LR + + + + ++YL S++H
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLE---EASVIH 126
Query: 217 RDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH---GYIAPELAYTMVLTEK 273
RD+++ N L+ V+DFG+ R + D T GT + +PE+ + K
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSK 184
Query: 274 CDVYSFGVVALEVL 287
DV+SFGV+ EV
Sbjct: 185 SDVWSFGVLMWEVF 198
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 113/229 (49%), Gaps = 12/229 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+DF+ +G G G V++ + PSG +A +KL H E + A E +L +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSP 83
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
IV YG + + ++M GSL +L+ +A R+ + ++ L+YL
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLR 140
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NIL+NS+ E + DFGV+ L +N V GT Y++PE
Sbjct: 141 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQG 196
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
+ + D++S G+ +E+ +GR+P + S + + + +LLD V P
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYP---IGSGSGSMAIFELLDYIVNEP 242
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 9/205 (4%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+DF+ +G G G V + Q PSG +A +KL H E + A E +L +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMA-RKLIHLEIKPAIRNQIIRELQVLHECNSP 74
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
IV YG + + ++M GSL +L+ EA R+ + ++ L+YL
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---EAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NIL+NS+ E + DFGV+ L +N V GT Y+APE
Sbjct: 132 EKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMAPERLQG 187
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D++S G+ +E+ +GR+P
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 13/219 (5%)
Query: 91 FDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNI 149
F K +G+G +G V+ + SG + +K ++ +++ +E + E +L + H NI
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP-MEQIEAEIEVLKSLDHPNI 82
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFC-ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
+K++ M+++ + G L I+ L ++K M +AL+Y H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 209 DCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPELA 265
+VH+D+ NIL + DFG+A L SD + T AGT Y+APE+
Sbjct: 143 Q---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD-EHSTNAAGTALYMAPEV- 197
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPK 302
+ +T KCD++S GVV +L G P G L V K
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK 236
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 73
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 130
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 187
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 245
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 20/223 (8%)
Query: 79 ITFQEMIVATEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTE 137
+ FQ M E ++ +G G YG V + + +G+ VA+KK S+ + + E
Sbjct: 19 LYFQSM----EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMRE 74
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVN 194
LL Q+RH N+V L C KK +L+++++ L DD + LD+
Sbjct: 75 IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTIL------DDLELFPNGLDYQVVQK 128
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+ + + + + H +I+HRDI NIL++ + DFG AR L +
Sbjct: 129 YLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV 185
Query: 255 GTHGYIAPELAYTMVLTEKC-DVYSFGVVALEVLMGR--HPGD 294
T Y APEL V K DV++ G + E+ MG PGD
Sbjct: 186 ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 96 CIGTGGYGSVYRAQLP-SGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G G +G V + +G++ A+K + + + ES E LL Q+ H NI+KLY
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHALSYLHCDC 210
F K +L+ + G LF DE I R I++ + ++Y+H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELF------DEIISRKRFSEVDAARIIRQVLSGITYMHKN- 145
Query: 211 IPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
IVHRD+ N+LL SK + + DFG++ + + + GT YIAPE+ +
Sbjct: 146 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHG 202
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
EKCDV+S GV+ +L G P
Sbjct: 203 -TYDEKCDVWSTGVILYILLSGCPP 226
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 96 CIGTGGYGSVYRAQLP-SGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G G +G V + +G++ A+K + + + ES E LL Q+ H NI+KLY
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHALSYLHCDC 210
F K +L+ + G LF DE I R I++ + ++Y+H +
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELF------DEIISRKRFSEVDAARIIRQVLSGITYMHKN- 151
Query: 211 IPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
IVHRD+ N+LL SK + + DFG++ + + + GT YIAPE+ +
Sbjct: 152 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHG 208
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
EKCDV+S GV+ +L G P
Sbjct: 209 -TYDEKCDVWSTGVILYILLSGCPP 232
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELD-FLMEALIISKFNHQNIV 111
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRN----DDEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 286
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 287 GP------VYRIMTQCWQHQPEDRP 305
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S++ H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKLNHQNIV 111
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRN----DDEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 112 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 286
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 287 GP------VYRIMTQCWQHQPEDRP 305
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 21 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 79
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 136
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 137 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 193
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 194 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 251
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 70
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYL--LNWCVQI 127
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 242
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 18/248 (7%)
Query: 77 GRITFQEMIVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFL 131
G + ++ TE IK +G+G +G+VY+ +P G+KV A+K+L + + A
Sbjct: 1 GAMALLRILKETEFKKIK-VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 59
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E EA++++ + + ++ +L G CL LI + M G L +R + I +
Sbjct: 60 EILD-EAYVMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL- 116
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251
+N +A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++
Sbjct: 117 -LNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 172
Query: 252 VVAGTH--GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDL 308
G ++A E + T + DV+S+GV E++ G P D + + +I I
Sbjct: 173 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILE 230
Query: 309 LDQRVPSP 316
+R+P P
Sbjct: 231 KGERLPQP 238
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 12 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 70
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 127
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 128 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 184
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 185 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 242
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 71
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 243
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 72
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 129
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 244
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 72
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 129
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 244
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 241
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 17/222 (7%)
Query: 82 QEMIVATEDFDIKY--CIGTGGYGSVYRAQL--PSGKKV--ALKKLHHSETELAFLESFQ 135
Q +++ + + IG G +G VY L GKK+ A+K L+ T++ + F
Sbjct: 22 QHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFL 80
Query: 136 TEAHLLSQIRHRNIVKLYGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
TE ++ H N++ L G CL + ++ YM+ G L +RN+ + +
Sbjct: 81 TEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIG 138
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL---HSDS-SNR 250
+A + +L VHRD+++ N +L+ K VADFG+AR + DS N+
Sbjct: 139 FGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNK 195
Query: 251 TVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
T ++A E T T K DV+SFGV+ E++ P
Sbjct: 196 TGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 241
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S++ H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKLNHQNIV 97
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 272
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 273 GP------VYRIMTQCWQHQPEDRP 291
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 241
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 76
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 133
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 248
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 36 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 94
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 151
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 152 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 208
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 209 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 266
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 72
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 129
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 244
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 14 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 72
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 129
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 130 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 186
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 187 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 244
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 71
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 185
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 243
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 17/234 (7%)
Query: 89 EDF-DIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
EDF +I +G G +G VY+AQ +A K+ +++E LE + E +L+ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHP 94
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV-KSMAHALSYL 206
NIVKL ++ ++++ ++ G++ ++ + + ++ +V K AL+YL
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYL 151
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H + I+HRD+ + NIL + +ADFGV+ R GT ++APE+
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVM 208
Query: 267 TMVLTE-----KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPS 315
+ K DV+S G+ +E+ P +NP +L+ + P+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPH---HELNPMRVLLKIAKSEPPT 259
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 96 CIGTGGYGSVYRAQLP-SGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G G +G V + +G++ A+K + + + ES E LL Q+ H NI+KLY
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHALSYLHCDC 210
F K +L+ + G LF DE I R I++ + ++Y+H +
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELF------DEIISRKRFSEVDAARIIRQVLSGITYMHKN- 168
Query: 211 IPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
IVHRD+ N+LL SK + + DFG++ + + + GT YIAPE+ +
Sbjct: 169 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHG 225
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
EKCDV+S GV+ +L G P
Sbjct: 226 -TYDEKCDVWSTGVILYILLSGCPP 249
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 96 CIGTGGYGSVYRAQLP-SGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G G +G V + +G++ A+K + + + ES E LL Q+ H NI+KLY
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHALSYLHCDC 210
F K +L+ + G LF DE I R I++ + ++Y+H +
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELF------DEIISRKRFSEVDAARIIRQVLSGITYMHKN- 169
Query: 211 IPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
IVHRD+ N+LL SK + + DFG++ + + + GT YIAPE+ +
Sbjct: 170 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI-GTAYYIAPEVLHG 226
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
EKCDV+S GV+ +L G P
Sbjct: 227 -TYDEKCDVWSTGVILYILLSGCPP 250
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 111
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRN----DDEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 112 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 228
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 229 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 286
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 287 GP------VYRIMTQCWQHQPEDRP 305
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 88
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRN----DDEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 89 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 205
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 206 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 263
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 264 GP------VYRIMTQCWQHQPEDRP 282
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 41/255 (16%)
Query: 69 EFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK-----KLHH 123
+F + YD + F E+ + +G+G +G V A K + K+
Sbjct: 30 DFREYEYDLKWEF-----PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK 84
Query: 124 SETELAFLESFQTEAHLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDD 182
+ + + E+ +E +++Q+ H NIV L G C ++LI++Y G L LR+
Sbjct: 85 EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKR 144
Query: 183 EAI-----------RLDWTKRVNIVK---------SMAHALSYLHCDCIPSIVHRDISSN 222
E RL+ + +N++ +A + +L S VHRD+++
Sbjct: 145 EKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAAR 201
Query: 223 NILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH----GYIAPELAYTMVLTEKCDVYS 278
N+L+ + DFG+AR + SDS+ VV G ++APE + + T K DV+S
Sbjct: 202 NVLVTHGKVVKICDFGLARDIMSDSN--YVVRGNARLPVKWMAPESLFEGIYTIKSDVWS 259
Query: 279 FGVVALEVL-MGRHP 292
+G++ E+ +G +P
Sbjct: 260 YGILLWEIFSLGVNP 274
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 96
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRN----DDEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 97 RCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 271
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 272 GP------VYRIMTQCWQHQPEDRP 290
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 113
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 114 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 230
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 231 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 288
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 289 GP------VYRIMTQCWQHQPEDRP 307
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 195 IVKSMAHALSYLHCD-CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A + YL CI HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 162 CTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 254 AG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 17 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 75
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 132
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 133 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 189
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 190 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 247
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 103
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 104 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 220
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 221 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 278
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 279 GP------VYRIMTQCWQHQPEDRP 297
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 96
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRN----DDEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 97 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 213
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 271
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 272 GP------VYRIMTQCWQHQPEDRP 290
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 123
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 124 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 240
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 241 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 298
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 299 GP------VYRIMTQCWQHQPEDRP 317
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 97
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ S R ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMP 214
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 272
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 273 GP------VYRIMTQCWQHQPEDRP 291
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 5 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 63
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 120
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 121 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 177
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 178 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 235
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 17/234 (7%)
Query: 89 EDF-DIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
EDF +I +G G +G VY+AQ +A K+ +++E LE + E +L+ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHP 94
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV-KSMAHALSYL 206
NIVKL ++ ++++ ++ G++ ++ + + ++ +V K AL+YL
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYL 151
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H + I+HRD+ + NIL + +ADFGV+ R GT ++APE+
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVM 208
Query: 267 TMVLTE-----KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPS 315
+ K DV+S G+ +E+ P +NP +L+ + P+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPH---HELNPMRVLLKIAKSEPPT 259
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 25/280 (8%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSVYRAQLP----SGKKVALKKLHHSETELAFLESFQT 136
+++++ + F + +G G +GSV AQL S KVA+K L + +E F
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCM------FLIYKYMRRGSLFCIL---RNDDEAIRL 187
EA + + H ++ KL G L + +I +M+ G L L R + L
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNL 134
Query: 188 DWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247
V + +A + YL + +HRD+++ N +L + VADFG++R ++S
Sbjct: 135 PLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 248 SNRTVVAGTH--GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIML 305
R A ++A E + T DV++FGV E+ M R N +I
Sbjct: 192 YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI-MTRGQTPYAGIENAEIYN 250
Query: 306 IDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ R+ P + + D++ + C + P RP
Sbjct: 251 YLIGGNRLKQPPECMEEVYDLM------YQCWSADPKQRP 284
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 195 IVKSMAHALSYLHCD-CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A + YL CI HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 162 CTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 254 AG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 111/234 (47%), Gaps = 17/234 (7%)
Query: 89 EDF-DIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
EDF +I +G G +G VY+AQ +A K+ +++E LE + E +L+ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHP 94
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV-KSMAHALSYL 206
NIVKL ++ ++++ ++ G++ ++ + + ++ +V K AL+YL
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYL 151
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H + I+HRD+ + NIL + +ADFGV+ R GT ++APE+
Sbjct: 152 HDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM 208
Query: 267 TMVLTE-----KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPS 315
+ K DV+S G+ +E+ P +NP +L+ + P+
Sbjct: 209 CETSKDRPYDYKADVWSLGITLIEMAEIEPPH---HELNPMRVLLKIAKSEPPT 259
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 112/230 (48%), Gaps = 21/230 (9%)
Query: 97 IGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G+G +G+VY+ +P G+ V A+K L + + A E EA++++ + + +
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILD-EAYVMAGVGSPYVSR 83
Query: 152 LYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
L G CL L+ + M G L +R + RL +N +A +SYL D
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVRENRG--RLGSQDLLNWCMQIAKGMSYLE-DV- 138
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYIAPELAYTMV 269
+VHRD+++ N+L+ S + DFG+ARLL D + G ++A E
Sbjct: 139 -RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR 197
Query: 270 LTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLD--QRVPSP 316
T + DV+S+GV E++ G P D + P + DLL+ +R+P P
Sbjct: 198 FTHQSDVWSYGVTVWELMTFGAKPYDGI----PAREIPDLLEKGERLPQP 243
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 91/210 (43%), Gaps = 9/210 (4%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
ED+D+ +G G G V A ++ K+ + + E+ + E + + H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
N+VK YG +L +Y G LF + D I + + + YLH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLH 121
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV--VAGTHGYIAPELA 265
I HRDI N+LL+ + ++DFG+A + ++ R + + GT Y+APEL
Sbjct: 122 G---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 266 YTMVL-TEKCDVYSFGVVALEVLMGRHPGD 294
E DV+S G+V +L G P D
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 71
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++ G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 243
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 15 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 73
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 130
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++ G
Sbjct: 131 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 187
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 188 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 245
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 96 CIGTGGYGSVYRAQLP-SGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G G +G V + +G++ A+K + + + ES E LL Q+ H NI KLY
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHALSYLHCDC 210
F K +L+ + G LF DE I R I++ + ++Y H +
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELF------DEIISRKRFSEVDAARIIRQVLSGITYXHKN- 145
Query: 211 IPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
IVHRD+ N+LL SK + + DFG++ + + + GT YIAPE+ +
Sbjct: 146 --KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKI-GTAYYIAPEVLHG 202
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
EKCDV+S GV+ +L G P
Sbjct: 203 -TYDEKCDVWSTGVILYILLSGCPP 226
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 71
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++ G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 243
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 13 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 71
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 128
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++ G
Sbjct: 129 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 185
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 186 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 243
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 89 EDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+DF+ +G G G V++ + PSG +A +KL H E + A E +L +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSP 126
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
IV YG + + ++M GSL +L+ +A R+ + ++ L+YL
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLR 183
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NIL+NS+ E + DFGV+ L +N V GT Y++PE
Sbjct: 184 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQG 239
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D++S G+ +E+ +GR+P
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 17/251 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELA--FLESFQTEAHLLSQIRHRNIVKLYG 154
+G GG+ + K+V K+ L E E + + H+++V +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F +F++ + RR SL + + L + ++ + YLH + +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRN---RV 136
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKC 274
+HRD+ N+ LN LE + DFG+A + D + V+ GT YIAPE+ + +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 196
Query: 275 DVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVF 334
DV+S G + +L+G+ P + S + + I + +P I+ + + ++
Sbjct: 197 DVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSIPKHINP--------VAASLIQ 247
Query: 335 ACLRSKPTSRP 345
L++ PT+RP
Sbjct: 248 KMLQTDPTARP 258
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQ---LPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ L K KVA+K L TE L +E ++ I +H+
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 79
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSL-------------FCILRNDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L +C + + +L V+
Sbjct: 80 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +H +
Sbjct: 140 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 196
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++ G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 241
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 97 IGTGGYGSVY--RAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
+G+G YG V R ++ ++ A+K + + + E +L + H NI+KLY
Sbjct: 45 LGSGAYGEVLLCRDKVTHVER-AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHALSYLHCDCI 211
F K+ +L+ + + G LF DE I + + I+K + ++YLH
Sbjct: 104 FFEDKRNYYLVMECYKGGELF------DEIIHRMKFNEVDAAVIIKQVLSGVTYLHK--- 154
Query: 212 PSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTM 268
+IVHRD+ N+LL SK + + DFG++ + + + + GT YIAPE+
Sbjct: 155 HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL-GTAYYIAPEVLRKK 213
Query: 269 VLTEKCDVYSFGVVALEVLMGRHP 292
EKCDV+S GV+ +L G P
Sbjct: 214 -YDEKCDVWSIGVILFILLAGYPP 236
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELA--FLESFQTEAHLLSQIRHRNIVKLYG 154
+G GG+ + K+V K+ L E E + + H+++V +G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F +F++ + RR SL + + L + ++ + YLH + +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRN---RV 160
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKC 274
+HRD+ N+ LN LE + DFG+A + D + V+ GT YIAPE+ + +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 220
Query: 275 DVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVF 334
DV+S G + +L+G+ P + S + + I + +P I+ + + ++
Sbjct: 221 DVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSIPKHINP--------VAASLIQ 271
Query: 335 ACLRSKPTSRPM--QRVSQEFLV 355
L++ PT+RP + ++ EF
Sbjct: 272 KMLQTDPTARPTINELLNDEFFT 294
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 18 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 76
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 133
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG A+LL ++ G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPI 190
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 248
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQ---LPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ L K KVA+K L TE L +E ++ I +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 94
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSL-------------FCILRNDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L +C + + +L V+
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +H +
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN 211
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELA--FLESFQTEAHLLSQIRHRNIVKLYG 154
+G GG+ + K+V K+ L E E + + H+++V +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F +F++ + RR SL + + L + ++ + YLH + +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRN---RV 162
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKC 274
+HRD+ N+ LN LE + DFG+A + D + V+ GT YIAPE+ + +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEV 222
Query: 275 DVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVF 334
DV+S G + +L+G+ P + S + + I + +P I+ + + ++
Sbjct: 223 DVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSIPKHINP--------VAASLIQ 273
Query: 335 ACLRSKPTSRPM--QRVSQEFLV 355
L++ PT+RP + ++ EF
Sbjct: 274 KMLQTDPTARPTINELLNDEFFT 296
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN 218
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 28/230 (12%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSE-TELAFLESFQTEAHLLSQ 143
V + F+I IG G +G V Q KK+ A+K ++ + E + + E ++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSM 199
+ H +V L+ ++ MF++ + G L L+ + +E ++L + +
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL-------FICEL 124
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259
AL YL I+HRD+ +NILL+ + DF +A +L ++ T +AGT Y
Sbjct: 125 VMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPY 180
Query: 260 IAPEL-------AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPK 302
+APE+ Y+ + D +S GV A E+L GR P + SS + K
Sbjct: 181 MAPEMFSSRKGAGYSFAV----DWWSLGVTAYELLRGRRPYHIRSSTSSK 226
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQI 144
+AT ++ IG G YG+VY+A+ P SG VALK + E S E LL ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 145 R---HRNIVKLYGFCLHKKC-----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
H N+V+L C + + L+++++ + + + + + K +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLM 118
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ L +LH +CI VHRD+ NIL+ S +ADFG+AR+ + VV T
Sbjct: 119 RQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV-T 174
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
Y APE+ D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQI 144
+AT ++ IG G YG+VY+A+ P SG VALK + E S E LL ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 145 R---HRNIVKLYGFCLHKKC-----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
H N+V+L C + + L+++++ + + + + + K +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLM 118
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ L +LH +CI VHRD+ NIL+ S +ADFG+AR+ + VV T
Sbjct: 119 RQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV-T 174
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
Y APE+ D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 30/207 (14%)
Query: 100 GGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS--QIRHRNIVKLYGFCL 157
G +G V++AQL + + VA+K + + S+Q E + S ++H NI++ G
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQDKQ-----SWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 158 HKKC----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC--- 210
++LI + +GSL L+ A + W + +I ++MA L+YLH D
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLK----ANVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 211 ----IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA--GTHGYIAPEL 264
P+I HRDI S N+LL + L A +ADFG+A + S GT Y+APE+
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 265 AYTMVLTE-----KCDVYSFGVVALEV 286
+ + + D+Y+ G+V E+
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 9/210 (4%)
Query: 84 MIVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
M + +DF+ +G G G V++ + PSG +A +KL H E + A E +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLH 59
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
+ IV YG + + ++M GSL +L+ +A R+ + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
L+YL I+HRD+ +NIL+NS+ E + DFGV+ L +N V GT Y++P
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSP 172
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E + + D++S G+ +E+ +GR+P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G YG VY+AQ G+ ALKK+ + + + E +L +++H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 157 LHKKCMFLIYKYMRRG--SLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
KK + L+++++ + L + E++ + + + + ++Y H +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCHDR---RV 121
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAYTMVLTEK 273
+HRD+ N+L+N + E +ADFG+AR T T Y AP+ L + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 274 CDVYSFGVVALEVLMG 289
D++S G + E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 9/205 (4%)
Query: 89 EDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+DF+ +G G G V++ + PSG +A +KL H E + A E +L +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLHECNSP 91
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
IV YG + + ++M GSL +L+ +A R+ + ++ L+YL
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKGLTYLR 148
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NIL+NS+ E + DFGV+ L +N V GT Y++PE
Sbjct: 149 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSPERLQG 204
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D++S G+ +E+ +GR+P
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 114
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 115 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ R ++
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 231
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 232 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 289
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 290 GP------VYRIMTQCWQHQPEDRP 308
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 137
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 138 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+AR ++ R ++
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMP 254
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 255 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 312
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 313 GP------VYRIMTQCWQHQPEDRP 331
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 9/210 (4%)
Query: 84 MIVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
M + +DF+ +G G G V++ + PSG +A +KL H E + A E +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLH 59
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
+ IV YG + + ++M GSL +L+ +A R+ + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
L+YL I+HRD+ +NIL+NS+ E + DFGV+ L +N V GT Y++P
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSP 172
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E + + D++S G+ +E+ +GR+P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 97 IGTGGYGSVYRAQ---LPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ L K KVA+K L TE L +E ++ I +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 94
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSL-------------FCILRNDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L F + + +L V+
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 195 IVKSMAHALSYLHCD-CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A + YL CI HRD+++ N+L+ +ADFG+AR +H +
Sbjct: 155 CAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 254 AG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN 218
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G YG VY+AQ G+ ALKK+ + + + E +L +++H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 157 LHKKCMFLIYKYMRRG--SLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
KK + L+++++ + L + E++ + + + + ++Y H +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCHDR---RV 121
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAYTMVLTEK 273
+HRD+ N+L+N + E +ADFG+AR T T Y AP+ L + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTT 181
Query: 274 CDVYSFGVVALEVLMG 289
D++S G + E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 9/210 (4%)
Query: 84 MIVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
M + +DF+ +G G G V++ + PSG +A +KL H E + A E +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLH 59
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
+ IV YG + + ++M GSL +L+ +A R+ + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
L+YL I+HRD+ +NIL+NS+ E + DFGV+ L +N V GT Y++P
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSP 172
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E + + D++S G+ +E+ +GR+P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 9/210 (4%)
Query: 84 MIVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
M + +DF+ +G G G V++ + PSG +A +KL H E + A E +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLEIKPAIRNQIIRELQVLH 59
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
+ IV YG + + ++M GSL +L+ +A R+ + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK---KAGRIPEQILGKVSIAVIKG 116
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
L+YL I+HRD+ +NIL+NS+ E + DFGV+ L +N V GT Y++P
Sbjct: 117 LTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--GTRSYMSP 172
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E + + D++S G+ +E+ +GR+P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-EDLSDLVSEMEMMKMIGKHK 101
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 102 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 104/237 (43%), Gaps = 23/237 (9%)
Query: 69 EFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSET- 126
E+ W ++M + EDF+I IG G +G V +L + KV A+K L+ E
Sbjct: 54 EYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML 113
Query: 127 ELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCIL-----RND 181
+ A F+ E +L + I L+ ++L+ Y G L +L R
Sbjct: 114 KRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP 173
Query: 182 DEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVA- 240
+E R + V + S+ H L Y VHRDI +NIL++ +ADFG
Sbjct: 174 EEMARFYLAEMVIAIDSV-HQLHY---------VHRDIKPDNILMDMNGHIRLADFGSCL 223
Query: 241 RLLHSDSSNRTVVAGTHGYIAPELAYTMV-----LTEKCDVYSFGVVALEVLMGRHP 292
+L+ + +V GT YI+PE+ M +CD +S GV E+L G P
Sbjct: 224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G C+L+ + D T + AL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNG---CLLKYIRKIGSFDETCTRFYTAEIVSAL 145
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL ++ D+++ G + +++ G P
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVAGLPP 233
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F +G+G +G+VY+ +P G+KV A+ +L + + A E EA+
Sbjct: 45 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILD-EAY 103
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 160
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 161 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 275
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 28/265 (10%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G VY Q+ PS +VA+K L +E L+ F EA ++S+ H+NIV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD-FLMEALIISKFNHQNIV 97
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYL 206
+ G L F++ + M G L LR + L +++ + +A YL
Sbjct: 98 RCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVA---DFGVARLLHSDSSNRTVVAGTHG--YIA 261
+ +HRDI++ N LL VA DFG+A+ ++ S R ++
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMP 214
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQ 320
PE + T K D +SFGV+ E+ +G P S N +++ R+ P +
Sbjct: 215 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP--YPSKSNQEVLEFVTSGGRMDPPKNCP 272
Query: 321 TVIQDIILVSKIVFACLRSKPTSRP 345
V +I+ C + +P RP
Sbjct: 273 GP------VYRIMTQCWQHQPEDRP 291
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 24/239 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPS-----GKKVALKKLHHSETELAFLESFQTEAHL 140
+ +DFD+ IG G Y V +L KV K+L + + ++ ++ QTE H+
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWV---QTEKHV 62
Query: 141 LSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNI 195
Q H +V L+ + +F + +Y+ G L ++ +E R ++ +++
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISL 121
Query: 196 VKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG 255
AL+YLH I++RD+ +N+LL+S+ + D+G+ + + G
Sbjct: 122 ------ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 172
Query: 256 THGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLL-SSVNPKIMLIDLLDQRV 313
T YIAPE+ D ++ GV+ E++ GR P D++ SS NP D L Q +
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 231
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G YG VY+AQ G+ ALKK+ + + + E +L +++H NIVKLY
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 157 LHKKCMFLIYKYMRRG--SLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
KK + L+++++ + L + E++ + + + + ++Y H +
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-----SFLLQLLNGIAYCHDR---RV 121
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAYTMVLTEK 273
+HRD+ N+L+N + E +ADFG+AR T T Y AP+ L + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTT 181
Query: 274 CDVYSFGVVALEVLMG 289
D++S G + E++ G
Sbjct: 182 IDIWSVGCIFAEMVNG 197
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLP-SGKKVALKKLHHSE-TELAFLESFQTEAHLLSQIRHRNIVKLYG 154
+G+G YG V + +G + A+K + S T + + E +L Q+ H NI+KLY
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 155 FCLHKKCMFLIYKYMRRGSLF--CILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
F K+ +L+ + R G LF ILR + I+K + +YLH
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQ-----KFSEVDAAVIMKQVLSGTTYLHKH--- 140
Query: 213 SIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMV 269
+IVHRD+ N+LL SK + DFG++ + + GT YIAPE+
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVLRKK- 198
Query: 270 LTEKCDVYSFGVVALEVLMGRHP 292
EKCDV+S GV+ +L G P
Sbjct: 199 YDEKCDVWSCGVILYILLCGYPP 221
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 24/239 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPS-----GKKVALKKLHHSETELAFLESFQTEAHL 140
+ +DFD+ IG G Y V +L KV K+L + + ++ ++ QTE H+
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWV---QTEKHV 58
Query: 141 LSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNI 195
Q H +V L+ + +F + +Y+ G L ++ +E R ++ +++
Sbjct: 59 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISL 117
Query: 196 VKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG 255
AL+YLH I++RD+ +N+LL+S+ + D+G+ + + G
Sbjct: 118 ------ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 168
Query: 256 THGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLL-SSVNPKIMLIDLLDQRV 313
T YIAPE+ D ++ GV+ E++ GR P D++ SS NP D L Q +
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 227
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLP-SGKKVALKKLHHSE-TELAFLESFQTEAHLLSQIRHRNIVKLYG 154
+G+G YG V + +G + A+K + S T + + E +L Q+ H NI+KLY
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 155 FCLHKKCMFLIYKYMRRGSLF--CILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
F K+ +L+ + R G LF ILR + I+K + +YLH
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQ-----KFSEVDAAVIMKQVLSGTTYLHK---H 123
Query: 213 SIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMV 269
+IVHRD+ N+LL SK + DFG++ + + GT YIAPE+
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL-GTAYYIAPEVLRKK- 181
Query: 270 LTEKCDVYSFGVVALEVLMGRHP 292
EKCDV+S GV+ +L G P
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPP 204
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 31/222 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 102 NIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 195 IVKSMAHALSYLHCD-CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A + YL CI HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 162 CTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 254 AG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQI 144
+AT ++ IG G YG+VY+A+ P SG VALK + E S E LL ++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 145 R---HRNIVKLYGFCLHKKC-----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
H N+V+L C + + L+++++ + + + + + K +++
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK--DLM 118
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ L +LH +CI VHRD+ NIL+ S +ADFG+AR+ + VV T
Sbjct: 119 RQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV-T 174
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
Y APE+ D++S G + E+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 24/237 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPS-----GKKVALKKLHHSETELAFLESFQTEAHL 140
+ +DFD+ IG G Y V +L KV K+L + + ++ ++ QTE H+
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWV---QTEKHV 73
Query: 141 LSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNI 195
Q H +V L+ + +F + +Y+ G L ++ +E R ++ +++
Sbjct: 74 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISL 132
Query: 196 VKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG 255
AL+YLH I++RD+ +N+LL+S+ + D+G+ + + G
Sbjct: 133 ------ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCG 183
Query: 256 THGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLL-SSVNPKIMLIDLLDQ 311
T YIAPE+ D ++ GV+ E++ GR P D++ SS NP D L Q
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 240
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 18/212 (8%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 93
Query: 144 IRHRNIVKLYGFCLHK-KCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
+ H VKLY FC + ++ Y + G L +R D T + A
Sbjct: 94 LDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSA 149
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYI 260
L YLH I+HRD+ NILLN + + DFG A++L +S + GT Y+
Sbjct: 150 LEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYV 206
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+PEL + D+++ G + +++ G P
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAGLPP 238
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 102 NIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 66
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 123
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 124 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 211
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F + +G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 76
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 133
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 248
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F + +G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 11 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 69
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 126
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 127 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 241
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 31/222 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I Y +G+L LR N ++ + V+
Sbjct: 102 NIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 195 IVKSMAHALSYLHCD-CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A + YL CI HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 162 CTYQLARGMEYLASQKCI----HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 254 AG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 19/263 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELA--FLESFQTEAHLLSQIRHRNIVKLYG 154
+G GG+ + K+V K+ L E E + + H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F +F++ + RR SL + + L + ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKC 274
+HRD+ N+ LN LE + DFG+A + D + + GT YIAPE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 275 DVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVF 334
DV+S G + +L+G+ P + S + + I + +P I+ + + ++
Sbjct: 199 DVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSIPKHINP--------VAASLIQ 249
Query: 335 ACLRSKPTSRPM--QRVSQEFLV 355
L++ PT+RP + ++ EF
Sbjct: 250 KMLQTDPTARPTINELLNDEFFT 272
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 117/240 (48%), Gaps = 17/240 (7%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKV----ALKKLHHSETELAFLESFQTEAH 139
I+ +F + +G +G+VY+ +P G+KV A+K+L + + A E EA+
Sbjct: 18 ILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILD-EAY 76
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+++ + + ++ +L G CL LI + M G L +R + I + +N +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYL--LNWCVQI 133
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH-- 257
A ++YL +VHRD+++ N+L+ + + DFG+A+LL ++ G
Sbjct: 134 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 190
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++A E + T + DV+S+GV E++ G P D + + +I I +R+P P
Sbjct: 191 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQP 248
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 147
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 148 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 208 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 264
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 265 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 110/251 (43%), Gaps = 17/251 (6%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELA--FLESFQTEAHLLSQIRHRNIVKLYG 154
+G GG+ + K+V K+ L E E + + H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F +F++ + RR SL + + L + ++ + YLH + +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRN---RV 138
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKC 274
+HRD+ N+ LN LE + DFG+A + D + + GT YIAPE+ + +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 198
Query: 275 DVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVF 334
DV+S G + +L+G+ P + S + + I + +P I+ + + ++
Sbjct: 199 DVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSIPKHINP--------VAASLIQ 249
Query: 335 ACLRSKPTSRP 345
L++ PT+RP
Sbjct: 250 KMLQTDPTARP 260
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I Y +G+L LR N ++ + V+
Sbjct: 102 NIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 65
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 122
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 123 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 210
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 112/239 (46%), Gaps = 24/239 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPS-----GKKVALKKLHHSETELAFLESFQTEAHL 140
+ +DFD+ IG G Y V +L +V K+L + + ++ ++ QTE H+
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWV---QTEKHV 105
Query: 141 LSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNI 195
Q H +V L+ + +F + +Y+ G L ++ +E R ++ +++
Sbjct: 106 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISL 164
Query: 196 VKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG 255
AL+YLH I++RD+ +N+LL+S+ + D+G+ + + G
Sbjct: 165 ------ALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG 215
Query: 256 THGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLL-SSVNPKIMLIDLLDQRV 313
T YIAPE+ D ++ GV+ E++ GR P D++ SS NP D L Q +
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI 274
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
E ++I +G G +G V + + + ++ A+K ++ + + + E LL ++ H
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHALS 204
NI+KL+ +++ + G LF DE I R I+K + ++
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELF------DEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 205 YLHCDCIPSIVHRDISSNNILLNSK---LEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
Y+H +IVHRD+ NILL SK + + DFG++ ++ + + GT YIA
Sbjct: 136 YMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYIA 191
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ EKCDV+S GV+ +L G P
Sbjct: 192 PEVLRG-TYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKV----ALKKLHHSETELAFLESFQTEAHLLSQIRH 146
F++ +G G +G V+ + SG A+K L + ++ + E +L ++ H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 147 RNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAH 201
IVKL Y F K ++LI ++R G LF L + +E ++ + +A
Sbjct: 86 PFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELAL 137
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL +LH I++RD+ NILL+ + + DFG+++ GT Y+A
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ T+ D +SFGV+ E+L G P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 97 IGTGGYG-SVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G +G ++ G++ +K+++ S E + E +L+ ++H NIV+
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 156 CLHKKCMFLIYKYMRRGSLF-------CILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
++++ Y G LF +L +D+ LDW ++ + AL ++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI--LDWFVQICL------ALKHVHD 143
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTM 268
I+HRDI S NI L + DFG+AR+L+S GT Y++PE+
Sbjct: 144 R---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENK 200
Query: 269 VLTEKCDVYSFGVVALEVLMGRH 291
K D+++ G V E+ +H
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKH 223
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 115/263 (43%), Gaps = 19/263 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELA--FLESFQTEAHLLSQIRHRNIVKLYG 154
+G GG+ + K+V K+ L E E + + H+++V +G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F +F++ + RR SL + + L + ++ + YLH + +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKA---LTEPEARYYLRQIVLGCQYLHRN---RV 142
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKC 274
+HRD+ N+ LN LE + DFG+A + D + + GT YIAPE+ + +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEV 202
Query: 275 DVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVF 334
DV+S G + +L+G+ P + S + + I + +P I+ + + ++
Sbjct: 203 DVWSIGCIMYTLLVGKPPFE-TSCLKETYLRIKKNEYSIPKHINP--------VAASLIQ 253
Query: 335 ACLRSKPTSRPM--QRVSQEFLV 355
L++ PT+RP + ++ EF
Sbjct: 254 KMLQTDPTARPTINELLNDEFFT 276
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
E ++I +G G +G V + + + ++ A+K ++ + + + E LL ++ H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHAL 203
NI+KL+ +++ + G LF DE I R I+K + +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELF------DEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSK---LEAFVADFGVARLLHSDSSNRTVVAGTHGYI 260
+Y+H +IVHRD+ NILL SK + + DFG++ ++ + + GT YI
Sbjct: 135 TYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYI 190
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
APE+ EKCDV+S GV+ +L G P
Sbjct: 191 APEVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 64
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 121
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 122 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
E ++I +G G +G V + + + ++ A+K ++ + + + E LL ++ H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHAL 203
NI+KL+ +++ + G LF DE I R I+K + +
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELF------DEIIKRKRFSEHDAARIIKQVFSGI 134
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSK---LEAFVADFGVARLLHSDSSNRTVVAGTHGYI 260
+Y+H +IVHRD+ NILL SK + + DFG++ ++ + + GT YI
Sbjct: 135 TYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRI-GTAYYI 190
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
APE+ EKCDV+S GV+ +L G P
Sbjct: 191 APEVL-RGTYDEKCDVWSAGVILYILLSGTPP 221
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 34/268 (12%)
Query: 97 IGTGGYGSVYRAQLP----SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
+G G +GSV L + KVA+K + + +E F +EA + H N+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 153 YGFCLHKKCM-----FLIYKYMRRGSLFCIL---RNDDEAIRLDWTKRVNIVKSMAHALS 204
G C+ +I +M+ G L L R + + + + +A +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT--VVAGTHGYIAP 262
YL + +HRD+++ N +L + VADFG+++ ++S R + +IA
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVL---MGRHPGDLLSSVNPKIMLIDLLDQRVPSPID- 318
E V T K DV++FGV E+ M +PG N ++ L R+ P D
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPG----VQNHEMYDYLLHGHRLKQPEDC 274
Query: 319 -DQTVIQDIILVSKIVFACLRSKPTSRP 345
D+ + +I+++C R+ P RP
Sbjct: 275 LDE--------LYEIMYSCWRTDPLDRP 294
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 63
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 120
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 121 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 208
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 88
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 89 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 149 CTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 205
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 206 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 90
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 91 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 151 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 207
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 208 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G+G YG+V A +G KVA+KKL+ F + E LL +RH N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 156 CLHKKCM------FLIYKYMRR--GSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+ + +L+ +M G L + ++ I+ +V M L Y+H
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRYIH 145
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ N+ +N E + DFG+AR S+ V T Y APE+
Sbjct: 146 A---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV---TRWYRAPEVILN 199
Query: 268 -MVLTEKCDVYSFGVVALEVLMGR 290
M T+ D++S G + E++ G+
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 29/221 (13%)
Query: 97 IGTGGYGSVYRAQLPSGKK--------VALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ K VA+K L TE L +E ++ I +H+
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 93
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------------NDDEAIRLDWTKRVN 194
NI+ L G C +++I +Y +G+L LR N ++ + V+
Sbjct: 94 NIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + YL +HRD+++ N+L+ +ADFG+AR +++ +
Sbjct: 154 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 210
Query: 255 G--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+SFGV+ E+ +G P
Sbjct: 211 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 86
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 143
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 145
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAGLPP 233
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKV----ALKKLHHSETELAFLESFQTEAHLLSQIRH 146
F++ +G G +G V+ + SG A+K L + ++ + E +L ++ H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 147 RNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAH 201
IVKL Y F K ++LI ++R G LF L + +E ++ + +A
Sbjct: 86 PFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELAL 137
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL +LH I++RD+ NILL+ + + DFG+++ GT Y+A
Sbjct: 138 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 194
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ T+ D +SFGV+ E+L G P
Sbjct: 195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 145
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 88 TEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
++++D+K +G G + V R +G + A K ++ + + + EA + +++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK--RVNIVKSMAHALS 204
NIV+L+ + +L++ + G LF +D R +++ + ++ + +++
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELF-----EDIVAREFYSEADASHCIQQILESIA 142
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIA 261
Y H + IVHR++ N+LL SK + +ADFG+A + +DS AGT GY++
Sbjct: 143 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLS 198
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ ++ D+++ GV+ +L+G P
Sbjct: 199 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 86
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 143
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHS-ETELAFLESFQTEAHLLSQIR 145
++ +++ +G GG V+ A+ L + VA+K L + +F F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 146 HRNIVKLYGFCLHKKCM----FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
H IV +Y + +++ +Y+ +L I+ + + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR----TVVAGTH 257
AL++ H + I+HRD+ NIL+++ V DFG+AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAI-ADSGNSVXQTAAVIGTA 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSV 299
Y++PE A + + DVYS G V EVL G P GD SV
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
IG G + V A+ + +GK+VA+K + ++ + L+ E ++ + H NIVKL+
Sbjct: 14 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 73
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI---VKSMAHALSYLHCDCI 211
+K ++L+ +Y G +F D + W K + + A+ Y H
Sbjct: 74 VIETEKTLYLVMEYASGGEVF------DYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF- 126
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLT 271
IVHRD+ + N+LL++ + +ADFG + + + G+ Y APEL
Sbjct: 127 --IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKYD 183
Query: 272 -EKCDVYSFGVVALEVLMGRHPGD 294
+ DV+S GV+ ++ G P D
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 92/199 (46%), Gaps = 14/199 (7%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G+G YGSV A SG+KVA+KKL F + E LL ++H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHALSYLHCDCIP 212
+ Y + + ++ D + I + K +V M L Y+H
Sbjct: 92 FTPASSLRNFYDFYL---VMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHS---A 145
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLT 271
+VHRD+ N+ +N E + DFG+AR H+D+ V T Y APE+ + M
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVV-TRWYRAPEVILSWMHYN 202
Query: 272 EKCDVYSFGVVALEVLMGR 290
+ D++S G + E+L G+
Sbjct: 203 QTVDIWSVGCIMAEMLTGK 221
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKV----ALKKLHHSETELAFLESFQTEAHLLSQIRH 146
F++ +G G +G V+ + SG A+K L + ++ + E +L ++ H
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 86
Query: 147 RNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAH 201
IVKL Y F K ++LI ++R G LF L + +E ++ + +A
Sbjct: 87 PFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELAL 138
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL +LH I++RD+ NILL+ + + DFG+++ GT Y+A
Sbjct: 139 ALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMA 195
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ T+ D +SFGV+ E+L G P
Sbjct: 196 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 89
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 146
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 147 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 86
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 143
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 107/227 (47%), Gaps = 16/227 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G G +GSV + KK VA+K L TE A E EA ++ Q+ + IV+L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
G C + + L+ + G L L E I + + ++ ++ + YL +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLE---EKN 130
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAYTMVL 270
VHRD+++ N+LL ++ A ++DFG+++ L +D S T + + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 271 TEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
+ + DV+S+GV E L G+ P + P++M +R+ P
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKRMECP 235
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 145
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 88 TEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
++++D+K +G G + V R +G + A K ++ + + + EA + +++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK--RVNIVKSMAHALS 204
NIV+L+ + +L++ + G LF +D R +++ + ++ + +++
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELF-----EDIVAREFYSEADASHCIQQILESIA 118
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIA 261
Y H + IVHR++ N+LL SK + +ADFG+A + +DS AGT GY++
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLS 174
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ ++ D+++ GV+ +L+G P
Sbjct: 175 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 12/210 (5%)
Query: 88 TEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
T+++ + IG G + V R +L +G + A K ++ + + + EA + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL-SY 205
NIV+L+ + +L++ + G LF ++ + ++ + + L +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAV 116
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAP 262
LHC + +VHRD+ N+LL SK + +ADFG+A + D AGT GY++P
Sbjct: 117 LHCHQM-GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E+ + D+++ GV+ +L+G P
Sbjct: 176 EVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 145
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 88
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 145
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 89
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 146
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 147 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 234
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 17/223 (7%)
Query: 75 YDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSET-ELAFLE 132
+DGR+ ++ +G G +G V + +G KVA+K L+ + L +
Sbjct: 4 HDGRVKIGHYVLGD-------TLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG 56
Query: 133 SFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKR 192
+ E L RH +I+KLY F++ +Y+ G LF + R++ +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG---RVEEMEA 113
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
+ + + A+ Y H + VHRD+ N+LL++ + A +ADFG++ ++ SD
Sbjct: 114 RRLFQQILSAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRT 169
Query: 253 VAGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGRHPGD 294
G+ Y APE ++ + + D++S GV+ +L G P D
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 88 TEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
++++D+K +G G + V R +G + A K ++ + + + EA + +++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK--RVNIVKSMAHALS 204
NIV+L+ + +L++ + G LF +D R +++ + ++ + +++
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELF-----EDIVAREFYSEADASHCIQQILESIA 119
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIA 261
Y H + IVHR++ N+LL SK + +ADFG+A + +DS AGT GY++
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLS 175
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ ++ D+++ GV+ +L+G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHS-ETELAFLESFQTEAHLLSQIR 145
++ +++ +G GG V+ A+ L + VA+K L + +F F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 146 HRNIVKLYGFCLHKKCM----FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
H IV +Y + +++ +Y+ +L I+ + + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR----TVVAGTH 257
AL++ H + I+HRD+ NI++++ V DFG+AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSV 299
Y++PE A + + DVYS G V EVL G P GD SV
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 91
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 92 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 148
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 149 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 236
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
T+++ + +G G + V R ++P+G++ A K ++ + + + EA + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL-SY 205
NIV+L+ + +L++ + G LF ++ + ++ + + L S
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILESV 116
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAP 262
HC + IVHRD+ N+LL SK + +ADFG+A + D AGT GY++P
Sbjct: 117 NHCH-LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E+ + D+++ GV+ +L+G P
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 109/211 (51%), Gaps = 15/211 (7%)
Query: 88 TEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
++++D+K +G G + V R +G + A K ++ + + + EA + +++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK--RVNIVKSMAHALS 204
NIV+L+ + +L++ + G LF +D R +++ + ++ + +++
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELF-----EDIVAREFYSEADASHCIQQILESIA 119
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIA 261
Y H + IVHR++ N+LL SK + +ADFG+A + +DS AGT GY++
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLS 175
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ ++ D+++ GV+ +L+G P
Sbjct: 176 PEVLKKDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQ----LPSGKKVALKKLHHSETELAFLESFQTEA--H 139
+ E F++ +G GGYG V++ + +GK A+K L + ++ T+A +
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 140 LLSQIRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS 198
+L +++H IV L Y F K ++LI +Y+ G LF L + E I ++ T + +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQL--EREGIFMEDTACFYLAE- 129
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258
++ AL +LH I++RD+ NI+LN + + DFG+ + D + GT
Sbjct: 130 ISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE 186
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ D +S G + ++L G P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 97 IGTGGYGSVYRAQ---LPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ L K KVA+K L TE L +E ++ I +H+
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 87
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR---------------NDDEAIRLDWTKR 192
NI+ L G C +++I +Y +G+L L+ N +E +L
Sbjct: 88 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDL 145
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
V+ +A + YL +HRD+++ N+L+ +ADFG+AR +H +
Sbjct: 146 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 253 VAG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 97 IGTGGYGSVYRAQ---LPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ L K KVA+K L TE L +E ++ I +H+
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 86
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR---------------NDDEAIRLDWTKR 192
NI+ L G C +++I +Y +G+L L+ N +E +L
Sbjct: 87 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDL 144
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
V+ +A + YL +HRD+++ N+L+ +ADFG+AR +H +
Sbjct: 145 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 253 VAG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
T+++ + +G G + V R ++P+G++ A K ++ + + + EA + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL-SY 205
NIV+L+ + +L++ + G LF ++ + ++ + + L S
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELF------EDIVAREYYSEADASHCIQQILESV 116
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAP 262
HC + IVHRD+ N+LL SK + +ADFG+A + D AGT GY++P
Sbjct: 117 NHCH-LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSP 175
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E+ + D+++ GV+ +L+G P
Sbjct: 176 EVLRKDPYGKPVDMWACGVILYILLVGYPP 205
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 35/224 (15%)
Query: 97 IGTGGYGSVYRAQ---LPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ L K KVA+K L TE L +E ++ I +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 94
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR---------------NDDEAIRLDWTKR 192
NI+ L G C +++I +Y +G+L L+ N +E +L
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEE--QLSSKDL 152
Query: 193 VNIVKSMAHALSYLHCD-CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251
V+ +A + YL CI HRD+++ N+L+ +ADFG+AR +H +
Sbjct: 153 VSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 252 VVAG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 97 IGTGGYGSVYRAQ---LPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ L K KVA+K L TE L +E ++ I +H+
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 94
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR---------------NDDEAIRLDWTKR 192
NI+ L G C +++I +Y +G+L L+ N +E +L
Sbjct: 95 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDL 152
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
V+ +A + YL +HRD+++ N+L+ +ADFG+AR +H +
Sbjct: 153 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 253 VAG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 70
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 71 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 127
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 128 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 215
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 97 IGTGGYGSVYRAQ---LPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ L K KVA+K L TE L +E ++ I +H+
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 83
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR---------------NDDEAIRLDWTKR 192
NI+ L G C +++I +Y +G+L L+ N +E +L
Sbjct: 84 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDL 141
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
V+ +A + YL +HRD+++ N+L+ +ADFG+AR +H +
Sbjct: 142 VSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 253 VAG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 128/287 (44%), Gaps = 54/287 (18%)
Query: 96 CIGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G V +A + +G K+ + L +E ++L Q+ H +++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRN-----------------------DDEAIRL 187
KLYG C + LI +Y + GSL LR D+ A+ +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 188 DWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247
++ ++ + YL S+VHRD+++ NIL+ + ++DFG++R ++ +
Sbjct: 150 --GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 248 SNRTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNP 301
S V + G ++A E + + T + DV+SFGV+ E++ +G +P + P
Sbjct: 205 S---XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP---YPGIPP 258
Query: 302 KIMLIDLL--DQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPM 346
+ L +LL R+ P + + ++L C + +P RP+
Sbjct: 259 E-RLFNLLKTGHRMERPDNCSEEMYRLML------QCWKQEPDKRPV 298
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 13/232 (5%)
Query: 69 EFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSET- 126
EF W +EM + EDF+I IG G +G V ++ + +++ A+K L+ E
Sbjct: 54 EFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEML 113
Query: 127 ELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR 186
+ A F+ E +L + I L+ + ++L+ Y G L +L ++ +
Sbjct: 114 KRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP 173
Query: 187 LDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246
D + + M A+ +H VHRDI +N+LL+ +ADFG ++ D
Sbjct: 174 EDMARFY--IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD 228
Query: 247 SSNRTVVA-GTHGYIAPELAYTMV-----LTEKCDVYSFGVVALEVLMGRHP 292
+ ++ VA GT YI+PE+ M +CD +S GV E+L G P
Sbjct: 229 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 35/224 (15%)
Query: 97 IGTGGYGSVYRAQ---LPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI-RHR 147
+G G +G V A+ L K KVA+K L TE L +E ++ I +H+
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE-KDLSDLISEMEMMKMIGKHK 135
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR---------------NDDEAIRLDWTKR 192
NI+ L G C +++I +Y +G+L L+ N +E +L
Sbjct: 136 NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE--QLSSKDL 193
Query: 193 VNIVKSMAHALSYLHCD-CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251
V+ +A + YL CI HRD+++ N+L+ +ADFG+AR +H +
Sbjct: 194 VSCAYQVARGMEYLASKKCI----HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 252 VVAG--THGYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + + T + DV+SFGV+ E+ +G P
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQ----LPSGKKVALKKLHHSETELAFLESFQTEA--H 139
+ E F++ +G GGYG V++ + +GK A+K L + ++ T+A +
Sbjct: 14 IRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERN 73
Query: 140 LLSQIRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS 198
+L +++H IV L Y F K ++LI +Y+ G LF L + E I ++ T + +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMQL--EREGIFMEDTACFYLAE- 129
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258
++ AL +LH I++RD+ NI+LN + + DFG+ + D + GT
Sbjct: 130 ISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIE 186
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ D +S G + ++L G P
Sbjct: 187 YMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 13/232 (5%)
Query: 69 EFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSET- 126
EF W +EM + EDF+I IG G +G V ++ + +++ A+K L+ E
Sbjct: 70 EFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEML 129
Query: 127 ELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR 186
+ A F+ E +L + I L+ + ++L+ Y G L +L ++ +
Sbjct: 130 KRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP 189
Query: 187 LDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD 246
D + + M A+ +H VHRDI +N+LL+ +ADFG ++ D
Sbjct: 190 EDMARFY--IGEMVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDD 244
Query: 247 SSNRTVVA-GTHGYIAPELAYTMV-----LTEKCDVYSFGVVALEVLMGRHP 292
+ ++ VA GT YI+PE+ M +CD +S GV E+L G P
Sbjct: 245 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 85
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 142
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 143 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 14/199 (7%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G+G YGSV A SG+KVA+KKL F + E LL ++H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAI---RLDWTKRVNIVKSMAHALSYLHCDCIP 212
+ Y + + ++ D + I K +V M L Y+H
Sbjct: 110 FTPASSLRNFYDFYL---VMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHS---A 163
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLT 271
+VHRD+ N+ +N E + DFG+AR H+D+ V T Y APE+ + M
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVV-TRWYRAPEVILSWMHYN 220
Query: 272 EKCDVYSFGVVALEVLMGR 290
+ D++S G + E+L G+
Sbjct: 221 QTVDIWSVGCIMAEMLTGK 239
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 17/223 (7%)
Query: 100 GGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHK 159
G +G VY+AQ +A K+ +++E LE + E +L+ H NIVKL ++
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVEIDILASCDHPNIVKLLDAFYYE 79
Query: 160 KCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV-KSMAHALSYLHCDCIPSIVHRD 218
++++ ++ G++ ++ + + ++ +V K AL+YLH + I+HRD
Sbjct: 80 NNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KIIHRD 133
Query: 219 ISSNNILLNSKLEAFVADFGV-ARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE----- 272
+ + NIL + +ADFGV A+ + R GT ++APE+ +
Sbjct: 134 LKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDY 193
Query: 273 KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPS 315
K DV+S G+ +E+ P +NP +L+ + P+
Sbjct: 194 KADVWSLGITLIEMAEIEPPH---HELNPMRVLLKIAKSEPPT 233
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 91 FDIKYCIGTGGYGSVYR-AQLPSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRH 146
+DI +GTG +G V+R + +G A K + H S+ E + + E +S +RH
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE-----TVRKEIQTMSVLRH 213
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+V L+ M +IY++M G LF + DE ++ + V ++ + L ++
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA--DEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 207 HCDCIPSIVHRDISSNNILLNSKL--EAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
H + + VH D+ NI+ +K E + DFG+ L S + V GT + APE+
Sbjct: 272 HEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-VTTGTAEFAAPEV 327
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
A + D++S GV++ +L G P
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 34/271 (12%)
Query: 48 LRRPKVRKAKPTETKKTRCGDEFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYR 107
L P +RK K + +R D + +++ + ED+++ IG G +G V
Sbjct: 41 LDFPALRKNKNIDNFLSRYKDTIN--------KIRDLRMKAEDYEVVKVIGRGAFGEVQL 92
Query: 108 AQLPSGKKV-ALKKLHHSE----TELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHKKCM 162
+ S +KV A+K L E ++ AF F E +++ +V+L+ + +
Sbjct: 93 VRHKSTRKVYAMKLLSKFEMIKRSDSAF---FWEERDIMAFANSPWVVQLFYAFQDDRYL 149
Query: 163 FLIYKYMRRGSLFCILRNDD--EAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDIS 220
+++ +YM G L ++ N D E +T V + H++ + +HRD+
Sbjct: 150 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---------IHRDVK 200
Query: 221 SNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-GTHGYIAPELAYTM----VLTEKCD 275
+N+LL+ +ADFG ++ + R A GT YI+PE+ + +CD
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 276 VYSFGVVALEVLMGRHP--GDLLSSVNPKIM 304
+S GV E+L+G P D L KIM
Sbjct: 261 WWSVGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 17/208 (8%)
Query: 91 FDIKYCIGTGGYGSVYR-AQLPSGKKVALKKL---HHSETELAFLESFQTEAHLLSQIRH 146
+DI +GTG +G V+R + +G A K + H S+ E + + E +S +RH
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE-----TVRKEIQTMSVLRH 107
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+V L+ M +IY++M G LF + DE ++ + V ++ + L ++
Sbjct: 108 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA--DEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 207 HCDCIPSIVHRDISSNNILLNSKL--EAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
H + + VH D+ NI+ +K E + DFG+ L S + V GT + APE+
Sbjct: 166 HEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK-VTTGTAEFAAPEV 221
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
A + D++S GV++ +L G P
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHS-ETELAFLESFQTEAHLLSQIR 145
++ +++ +G GG V+ A+ L + VA+K L + +F F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 146 HRNIVKLYGFCLHKKCM----FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
H IV +Y + +++ +Y+ +L I+ + + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR----TVVAGTH 257
AL++ H + I+HRD+ NI++++ V DFG+AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSV 299
Y++PE A + + DVYS G V EVL G P GD SV
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 89 EDFDIKYC--IGTGGYGSVYRAQLP-----SGKKVALKKLHHSETELAFLESFQTEAHLL 141
E+ +KY +G G +GSV + +G VA+K+L HS + FQ E +L
Sbjct: 9 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQIL 66
Query: 142 SQIRHRNIVKLYG--FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+ IVK G + ++ + L+ +Y+ G L L+ RLD ++ + +
Sbjct: 67 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQI 124
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG- 258
+ YL VHRD+++ NIL+ S+ +ADFG+A+LL D V
Sbjct: 125 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 181
Query: 259 --YIAPELAYTMVLTEKCDVYSFGVVALEVL 287
+ APE + + + DV+SFGVV E+
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 34/268 (12%)
Query: 51 PKVRKAKPTETKKTRCGDEFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQL 110
P +RK K + +R D + +++ + ED+++ IG G +G V +
Sbjct: 39 PALRKNKNIDNFLSRYKDTIN--------KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRH 90
Query: 111 PSGKKV-ALKKLHHSE----TELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLI 165
S +KV A+K L E ++ AF F E +++ +V+L+ + ++++
Sbjct: 91 KSTRKVYAMKLLSKFEMIKRSDSAF---FWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147
Query: 166 YKYMRRGSLFCILRNDD--EAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNN 223
+YM G L ++ N D E +T V + H++ + +HRD+ +N
Sbjct: 148 MEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---------IHRDVKPDN 198
Query: 224 ILLNSKLEAFVADFGVARLLHSDSSNRTVVA-GTHGYIAPELAYTM----VLTEKCDVYS 278
+LL+ +ADFG ++ + R A GT YI+PE+ + +CD +S
Sbjct: 199 MLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 258
Query: 279 FGVVALEVLMGRHP--GDLLSSVNPKIM 304
GV E+L+G P D L KIM
Sbjct: 259 VGVFLYEMLVGDTPFYADSLVGTYSKIM 286
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + +V A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 85
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 142
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 143 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 230
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 120/268 (44%), Gaps = 34/268 (12%)
Query: 51 PKVRKAKPTETKKTRCGDEFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQL 110
P +RK K + +R D + +++ + ED+++ IG G +G V +
Sbjct: 44 PALRKNKNIDNFLSRYKDTIN--------KIRDLRMKAEDYEVVKVIGRGAFGEVQLVRH 95
Query: 111 PSGKKV-ALKKLHHSE----TELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLI 165
S +KV A+K L E ++ AF F E +++ +V+L+ + ++++
Sbjct: 96 KSTRKVYAMKLLSKFEMIKRSDSAF---FWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 152
Query: 166 YKYMRRGSLFCILRNDD--EAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNN 223
+YM G L ++ N D E +T V + H++ + +HRD+ +N
Sbjct: 153 MEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGF---------IHRDVKPDN 203
Query: 224 ILLNSKLEAFVADFGVARLLHSDSSNRTVVA-GTHGYIAPELAYTM----VLTEKCDVYS 278
+LL+ +ADFG ++ + R A GT YI+PE+ + +CD +S
Sbjct: 204 MLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWS 263
Query: 279 FGVVALEVLMGRHP--GDLLSSVNPKIM 304
GV E+L+G P D L KIM
Sbjct: 264 VGVFLYEMLVGDTPFYADSLVGTYSKIM 291
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 89 EDFDIKYC--IGTGGYGSVYRAQLP-----SGKKVALKKLHHSETELAFLESFQTEAHLL 141
E+ +KY +G G +GSV + +G VA+K+L HS + FQ E +L
Sbjct: 8 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQIL 65
Query: 142 SQIRHRNIVKLYG--FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+ IVK G + ++ + L+ +Y+ G L L+ RLD ++ + +
Sbjct: 66 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQI 123
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG- 258
+ YL VHRD+++ NIL+ S+ +ADFG+A+LL D V
Sbjct: 124 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 180
Query: 259 --YIAPELAYTMVLTEKCDVYSFGVVALEVL 287
+ APE + + + DV+SFGVV E+
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 89 EDFDIKYC--IGTGGYGSVYRAQLP-----SGKKVALKKLHHSETELAFLESFQTEAHLL 141
E+ +KY +G G +GSV + +G VA+K+L HS + FQ E +L
Sbjct: 5 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQIL 62
Query: 142 SQIRHRNIVKLYG--FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+ IVK G + + + L+ +Y+ G L L+ RLD ++ + +
Sbjct: 63 KALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQI 120
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG- 258
+ YL VHRD+++ NIL+ S+ +ADFG+A+LL D V
Sbjct: 121 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP 177
Query: 259 --YIAPELAYTMVLTEKCDVYSFGVVALEVL 287
+ APE + + + DV+SFGVV E+
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 94/214 (43%), Gaps = 37/214 (17%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC 156
IG G YG V+ + G+KVA+K +E F E TE + +RH NI+
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE---TEIYQTVLMRHENILGFIAAD 100
Query: 157 LHKKC----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI- 211
+ ++LI Y GSL+ L+ + LD + + S L +LH +
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYLK----STTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 212 ----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV----AGTHGYIAPE 263
P+I HRD+ S NIL+ +AD G+A SD++ + GT Y+ PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 264 L-----------AYTMVLTEKCDVYSFGVVALEV 286
+ +Y M D+YSFG++ EV
Sbjct: 217 VLDESLNRNHFQSYIM-----ADMYSFGLILWEV 245
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 19/215 (8%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKV----ALKK---LHHSETELAFLESFQTEA 138
+ EDF++ +G G +G V+ A+ + ALKK L + E +E
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEK----- 69
Query: 139 HLLS-QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
+LS H + ++ K+ +F + +Y+ G L +++ + D ++
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAA 126
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+ L +LH IV+RD+ +NILL+ +ADFG+ + + GT
Sbjct: 127 EIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTP 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
YIAPE+ D +SFGV+ E+L+G+ P
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 105/223 (47%), Gaps = 17/223 (7%)
Query: 75 YDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSET-ELAFLE 132
+DGR+ ++ +G G +G V + +G KVA+K L+ + L +
Sbjct: 4 HDGRVKIGHYVLGD-------TLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVG 56
Query: 133 SFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKR 192
+ E L RH +I+KLY F++ +Y+ G LF + R++ +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG---RVEEMEA 113
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
+ + + A+ Y H + VHRD+ N+LL++ + A +ADFG++ ++ SD
Sbjct: 114 RRLFQQILSAVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRD 169
Query: 253 VAGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGRHPGD 294
G+ Y APE ++ + + D++S GV+ +L G P D
Sbjct: 170 SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHLLSQ 143
EDF +G G + + A +L + ++ A+K L E ++ ++ E ++S+
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYV---TRERDVMSR 86
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+ H VKLY + ++ Y + G L +R D T + AL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS---FDETCTRFYTAEIVSAL 143
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIA 261
YLH I+HRD+ NILLN + + DFG A++L +S + GT Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PEL + D+++ G + +++ G P
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 19/211 (9%)
Query: 89 EDFDIKYC--IGTGGYGSVYRAQLP-----SGKKVALKKLHHSETELAFLESFQTEAHLL 141
E+ +KY +G G +GSV + +G VA+K+L HS + FQ E +L
Sbjct: 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ--RDFQREIQIL 78
Query: 142 SQIRHRNIVKLYG--FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
+ IVK G + ++ + L+ +Y+ G L L+ RLD ++ + +
Sbjct: 79 KALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQI 136
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG- 258
+ YL VHRD+++ NIL+ S+ +ADFG+A+LL D V
Sbjct: 137 CKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP 193
Query: 259 --YIAPELAYTMVLTEKCDVYSFGVVALEVL 287
+ APE + + + DV+SFGVV E+
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G G YG VY + L + ++A+K++ E + + + E L ++H+NIV+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 87
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
+ + + + GSL +LR+ ++ + K + L YLH + IV
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIV 144
Query: 216 HRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPEL--AYTMVLTE 272
HRDI +N+L+N+ ++DFG ++ L + GT Y+APE+ +
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 273 KCDVYSFGVVALEVLMGRHP 292
D++S G +E+ G+ P
Sbjct: 205 AADIWSLGCTIIEMATGKPP 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHS-ETELAFLESFQTEAHLLSQIR 145
++ +++ +G GG V+ A+ L + VA+K L + +F F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 146 HRNIVKLYGFCLHKKCM----FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
H IV +Y + +++ +Y+ +L I+ + + + + ++
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR----TVVAGTH 257
AL++ H + I+HRD+ NI++++ V DFG+AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSV 299
Y++PE A + + DVYS G V EVL G P GD SV
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 121/283 (42%), Gaps = 31/283 (10%)
Query: 59 TETKKTRCGDEFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVAL 118
+E + + +F W + +E+ + +DF+I IG G + V ++ +V
Sbjct: 31 SELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYA 90
Query: 119 KKLHHSETEL--AFLESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFC 176
K+ + L + F+ E +L R I +L+ + ++L+ +Y G L
Sbjct: 91 MKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLT 150
Query: 177 ILRNDDEAIRLDWTK----RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEA 232
+L E I + + + + H L Y VHRDI +NILL+
Sbjct: 151 LLSKFGERIPAEMARFYLAEIVMAIDSVHRLGY---------VHRDIKPDNILLDRCGHI 201
Query: 233 FVADFGVARLLHSDSSNRTVVA-GTHGYIAPELAYTMVLTE-------KCDVYSFGVVAL 284
+ADFG L +D + R++VA GT Y++PE+ + +CD ++ GV A
Sbjct: 202 RLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAY 261
Query: 285 EVLMGRHP--GDLLSSVNPKI------MLIDLLDQRVPSPIDD 319
E+ G+ P D + KI + + L+D+ VP D
Sbjct: 262 EMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARD 304
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
IG G + V A+ + +GK+VA+K + ++ + L+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 155 FCLHKKCMFLIYKYMRRGSLFCIL----RNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
+K ++L+ +Y G +F L R ++ R + + + A+ Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQKF 133
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVL 270
IVHRD+ + N+LL++ + +ADFG + + + G+ Y APEL
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 271 T-EKCDVYSFGVVALEVLMGRHPGD 294
+ DV+S GV+ ++ G P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
IG G + V A+ + +GK+VA+K + ++ + L+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 155 FCLHKKCMFLIYKYMRRGSLFCIL----RNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
+K ++L+ +Y G +F L R ++ R + + + A+ Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQKF 133
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVL 270
IVHRD+ + N+LL++ + +ADFG + + + G+ Y APEL
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 271 T-EKCDVYSFGVVALEVLMGRHPGD 294
+ DV+S GV+ ++ G P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 103/210 (49%), Gaps = 33/210 (15%)
Query: 100 GGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQ--IRHRNIVKLY---- 153
G +G V++AQL + VA+K L +S+Q+E + S ++H N+++
Sbjct: 26 GRFGCVWKAQLMN-DFVAVKIF-----PLQDKQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 154 -GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI- 211
G L + ++LI + +GSL L+ + + W + ++ ++M+ LSYLH D
Sbjct: 80 RGSNLEVE-LWLITAFHDKGSLTDYLKGN----IITWNELCHVAETMSRGLSYLHEDVPW 134
Query: 212 -------PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS--SNRTVVAGTHGYIAP 262
PSI HRD S N+LL S L A +ADFG+A + GT Y+AP
Sbjct: 135 CRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAP 194
Query: 263 ELAYTMVLTE-----KCDVYSFGVVALEVL 287
E+ + + + D+Y+ G+V E++
Sbjct: 195 EVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 32/234 (13%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSE----TELAFLESFQTEAHLLS 142
ED+D+ IG G +G V + + +KV A+K L E ++ AF F E +++
Sbjct: 74 AEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF---FWEERDIMA 130
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
+V+L+ K ++++ +YM G L ++ N D + W K + A
Sbjct: 131 FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD--VPEKWAKFY--TAEVVLA 186
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGV------ARLLHSDSSNRTVVAGT 256
L +H ++HRD+ +N+LL+ +ADFG ++H D++ GT
Sbjct: 187 LDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA-----VGT 238
Query: 257 HGYIAPELAYTM----VLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIM 304
YI+PE+ + +CD +S GV E+L+G P D L KIM
Sbjct: 239 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQT--EAHLLSQ 143
V DFD +G G +G V + + + K+ E +A E T E+ +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 144 IRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS-MAH 201
RH + L Y F H + F++ +Y G LF L + R+ +R + +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVS 116
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL YLH +V+RDI N++L+ + DFG+ + SD + GT Y+A
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ D + GVV E++ GR P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 16/227 (7%)
Query: 97 IGTGGYGSVYRAQLPSGKK---VALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G G +GSV + KK VA+K L TE A E EA ++ Q+ + IV+L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
G C + + L+ + G L L E I + + ++ ++ + YL +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPV--SNVAELLHQVSMGMKYLEEK---N 456
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPELAYTMVL 270
VHR++++ N+LL ++ A ++DFG+++ L +D S T + + APE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 271 TEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
+ + DV+S+GV E L G+ P + P++M +R+ P
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKRMECP 561
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 9/201 (4%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
IG G + V A+ + +G++VA+K + ++ L+ E ++ + H NIVKL+
Sbjct: 19 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 78
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
+K ++LI +Y G +F L R+ + + + + A+ Y H I
Sbjct: 79 VIETEKTLYLIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQ---KRI 132
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLT-EK 273
VHRD+ + N+LL++ + +ADFG + T G+ Y APEL +
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-FCGSPPYAAPELFQGKKYDGPE 191
Query: 274 CDVYSFGVVALEVLMGRHPGD 294
DV+S GV+ ++ G P D
Sbjct: 192 VDVWSLGVILYTLVSGSLPFD 212
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G G YG VY + L + ++A+K++ E + + + E L ++H+NIV+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEI--PERDSRYSQPLHEEIALHKHLKHKNIVQYLGS 73
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
+ + + + GSL +LR+ ++ + K + L YLH + IV
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIV 130
Query: 216 HRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPEL--AYTMVLTE 272
HRDI +N+L+N+ ++DFG ++ L + GT Y+APE+ +
Sbjct: 131 HRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 273 KCDVYSFGVVALEVLMGRHP 292
D++S G +E+ G+ P
Sbjct: 191 AADIWSLGCTIIEMATGKPP 210
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQT--EAHLLSQ 143
V DFD +G G +G V + + + K+ E +A E T E+ +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 144 IRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS-MAH 201
RH + L Y F H + F++ +Y G LF L + R+ +R + +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVS 116
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL YLH +V+RDI N++L+ + DFG+ + SD + GT Y+A
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 173
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ D + GVV E++ GR P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQT--EAHLLSQ 143
V DFD +G G +G V + + + K+ E +A E T E+ +L
Sbjct: 5 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 144 IRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS-MAH 201
RH + L Y F H + F++ +Y G LF L + R+ +R + +
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVS 119
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL YLH +V+RDI N++L+ + DFG+ + SD + GT Y+A
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLA 176
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ D + GVV E++ GR P
Sbjct: 177 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 91 FDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNI 149
FDI+ IG G + +VY+ + +VA +L + + + F+ EA L ++H NI
Sbjct: 30 FDIE--IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNI 87
Query: 150 VKLY----GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS----MAH 201
V+ Y KKC+ L+ + G+L L+ ++ +++S +
Sbjct: 88 VRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFK-------VXKIKVLRSWCRQILK 140
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYI 260
L +LH P I+HRD+ +NI + + + D G+A L +S V GT +
Sbjct: 141 GLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFX 197
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
APE Y E DVY+FG LE +P
Sbjct: 198 APE-XYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 62
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R +
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 179
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV-LMGRHPGDLLSS--VNP 301
R G G +++PE V T DV+SFGVV E+ + P LS+ V
Sbjct: 180 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 236
Query: 302 KIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+M LLD+ P D++L +++ C + P RP
Sbjct: 237 FVMEGGLLDKPDNCP--------DMLL--ELMRMCWQYNPKMRP 270
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQT--EAHLLSQ 143
V DFD +G G +G V + + + K+ E +A E T E+ +L
Sbjct: 7 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 144 IRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS-MAH 201
RH + L Y F H + F++ +Y G LF L + R+ +R + +
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVS 121
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL YLH +V+RDI N++L+ + DFG+ + SD + GT Y+A
Sbjct: 122 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 178
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ D + GVV E++ GR P
Sbjct: 179 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 54/287 (18%)
Query: 96 CIGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G V +A + +G K+ + L +E ++L Q+ H +++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRN-----------------------DDEAIRL 187
KLYG C + LI +Y + GSL LR D+ A+ +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 188 DWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247
++ ++ + YL +VHRD+++ NIL+ + ++DFG++R ++ +
Sbjct: 150 --GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 248 SNRTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNP 301
S V + G ++A E + + T + DV+SFGV+ E++ +G +P + P
Sbjct: 205 S---XVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP---YPGIPP 258
Query: 302 KIMLIDLL--DQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPM 346
+ L +LL R+ P + + ++L C + +P RP+
Sbjct: 259 E-RLFNLLKTGHRMERPDNCSEEMYRLML------QCWKQEPDKRPV 298
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQT--EAHLLSQ 143
V DFD +G G +G V + + + K+ E +A E T E+ +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 144 IRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS-MAH 201
RH + L Y F H + F++ +Y G LF L + R+ +R + +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVS 116
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL YLH +V+RDI N++L+ + DFG+ + SD + GT Y+A
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ D + GVV E++ GR P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 54/287 (18%)
Query: 96 CIGTGGYGSVYRA-----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G G +G V +A + +G K+ + L +E ++L Q+ H +++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRN-----------------------DDEAIRL 187
KLYG C + LI +Y + GSL LR D+ A+ +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 188 DWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247
++ ++ + YL +VHRD+++ NIL+ + ++DFG++R ++ +
Sbjct: 150 --GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 248 SNRTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNP 301
S V + G ++A E + + T + DV+SFGV+ E++ +G +P + P
Sbjct: 205 S---YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP---YPGIPP 258
Query: 302 KIMLIDLL--DQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPM 346
+ L +LL R+ P + + ++L C + +P RP+
Sbjct: 259 E-RLFNLLKTGHRMERPDNCSEEMYRLML------QCWKQEPDKRPV 298
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
IG G + V A+ + +G++VA+K + ++ L+ E ++ + H NIVKL+
Sbjct: 22 TIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFE 81
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
+K ++LI +Y G +F L R+ + + + + A+ Y H I
Sbjct: 82 VIETEKTLYLIMEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQ---KRI 135
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLT-EK 273
VHRD+ + N+LL++ + +ADFG + + G Y APEL +
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEF-TVGGKLDAFCGAPPYAAPELFQGKKYDGPE 194
Query: 274 CDVYSFGVVALEVLMGRHPGD 294
DV+S GV+ ++ G P D
Sbjct: 195 VDVWSLGVILYTLVSGSLPFD 215
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHS-ETELAFLESFQTEAHLLSQIR 145
++ +++ +G GG V+ A+ L + VA+K L + +F F+ EA + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 146 HRNIVKLYGFCLHKKCM----FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
H IV +Y + +++ +Y+ +L I+ + + + + ++
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 127
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR----TVVAGTH 257
AL++ H + I+HRD+ NI++++ V DFG+AR + +DS N V GT
Sbjct: 128 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 183
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSV 299
Y++PE A + + DVYS G V EVL G P GD SV
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 227
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQT--EAHLLSQ 143
V DFD +G G +G V + + + K+ E +A E T E+ +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 144 IRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS-MAH 201
RH + L Y F H + F++ +Y G LF L + R+ +R + +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVS 116
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL YLH +V+RDI N++L+ + DFG+ + SD + GT Y+A
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ D + GVV E++ GR P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 12/211 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQT--EAHLLSQ 143
V DFD +G G +G V + + + K+ E +A E T E+ +L
Sbjct: 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 144 IRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS-MAH 201
RH + L Y F H + F++ +Y G LF L + R+ +R + +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVM-EYANGGELFFHLSRE----RVFTEERARFYGAEIVS 116
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
AL YLH +V+RDI N++L+ + DFG+ + SD + GT Y+A
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLA 173
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ D + GVV E++ GR P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
IG G + V A+ + +GK+VA+K + ++ + L+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 155 FCLHKKCMFLIYKYMRRGSLFCIL----RNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
+K ++L+ +Y G +F L R ++ R + + + A+ Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQKF 133
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVL 270
IVHRD+ + N+LL++ + +ADFG + + + G Y APEL
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 271 T-EKCDVYSFGVVALEVLMGRHPGD 294
+ DV+S GV+ ++ G P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+D + +GTG + V A+ +K+ K E S + E +L +I+H NIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
L ++LI + + G LF + D ++ ++ + A+ YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD-- 134
Query: 211 IPSIVHRDISSNNIL---LNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
IVHRD+ N+L L+ + ++DFG++++ S + GT GY+APE+
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
++ D +S GV+A +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 92 DIKY--CIGTGGYGSVYRAQLPSGK---KVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
DIK+ IG G +G V +A++ A+K++ ++ F E +L ++ H
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGH 84
Query: 147 R-NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRN-------------DDEAIRLDWTKR 192
NI+ L G C H+ ++L +Y G+L LR + A L +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
++ +A + YL +HRD+++ NIL+ A +ADFG++R
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------GQEVY 195
Query: 253 VAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLI 306
V T G ++A E V T DV+S+GV+ E++ +G P ++ L
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----LY 251
Query: 307 DLLDQ--RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ L Q R+ P++ + D++ C R KP RP
Sbjct: 252 EKLPQGYRLEKPLNCDDEVYDLMR------QCWREKPYERP 286
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 92 DIKY--CIGTGGYGSVYRAQLPSGK---KVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
DIK+ IG G +G V +A++ A+K++ ++ F E +L ++ H
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGH 74
Query: 147 R-NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRN-------------DDEAIRLDWTKR 192
NI+ L G C H+ ++L +Y G+L LR + A L +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
++ +A + YL +HRD+++ NIL+ A +ADFG++R
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------GQEVY 185
Query: 253 VAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLI 306
V T G ++A E V T DV+S+GV+ E++ +G P ++ L
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----LY 241
Query: 307 DLLDQ--RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ L Q R+ P++ + D++ C R KP RP
Sbjct: 242 EKLPQGYRLEKPLNCDDEVYDLMR------QCWREKPYERP 276
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAF-LESFQTEAHLLS- 142
+ EDF + +G G +G V+ A+ + + A+K L + +E E +LS
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
H + ++ K+ +F + +Y+ G L +++ + D ++ +
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILG 130
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
L +LH IV+RD+ +NILL+ +ADFG+ + + GT YIAP
Sbjct: 131 LQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAP 187
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E+ D +SFGV+ E+L+G+ P
Sbjct: 188 EILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 77
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLD-------W 189
EA ++ + ++V+L G + +I + M RG L LR+ A+ +
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R ++
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 195 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+D + +GTG + V A+ +K+ K E S + E +L +I+H NIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
L ++LI + + G LF + D ++ ++ + A+ YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD-- 134
Query: 211 IPSIVHRDISSNNIL---LNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
IVHRD+ N+L L+ + ++DFG++++ S + GT GY+APE+
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
++ D +S GV+A +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
IG G + V A+ + +GK+VA++ + ++ + L+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 155 FCLHKKCMFLIYKYMRRGSLFCIL----RNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
+K ++L+ +Y G +F L R ++ R + + + A+ Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQKF 133
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVL 270
IVHRD+ + N+LL++ + +ADFG + + + G+ Y APEL
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDTFCGSPPYAAPELFQGKKY 189
Query: 271 T-EKCDVYSFGVVALEVLMGRHPGD 294
+ DV+S GV+ ++ G P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHS-ETELAFLESFQTEAHLLSQIR 145
++ +++ +G GG V+ A+ L + VA+K L + +F F+ EA + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 146 HRNIVKLYGFCLHKKCM----FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
H IV +Y + +++ +Y+ +L I+ + + + + ++
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 144
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR----TVVAGTH 257
AL++ H + I+HRD+ NI++++ V DFG+AR + +DS N V GT
Sbjct: 145 ALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAI-ADSGNSVTQTAAVIGTA 200
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSV 299
Y++PE A + + DVYS G V EVL G P GD SV
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 244
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 90 DFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
++ ++ IG G + V A+ + +G++VA+K + ++ L+ E ++ + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCIL----RNDDEAIRLDWTKRVNIVKSMAHALS 204
IVKL+ +K ++L+ +Y G +F L R ++ R + + + A+
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQ 128
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y H IVHRD+ + N+LL+ + +ADFG + + T G+ Y APEL
Sbjct: 129 YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT-FCGSPPYAAPEL 184
Query: 265 AYTMVLT-EKCDVYSFGVVALEVLMGRHPGD 294
+ DV+S GV+ ++ G P D
Sbjct: 185 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 77
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R ++
Sbjct: 138 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 194
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 195 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 18/214 (8%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKL---HHSETELAFLESFQTEAHLL 141
+AT ++ IG G YG+VY+A+ P SG VALK + + S E LL
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALL 65
Query: 142 SQIR---HRNIVKLYGFCLHKKC-----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRV 193
++ H N+V+L C + + L+++++ + + + + + K
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK-- 123
Query: 194 NIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
++++ L +LH +CI VHRD+ NIL+ S +ADFG+AR ++S T V
Sbjct: 124 DLMRQFLRGLDFLHANCI---VHRDLKPENILVTSGGTVKLADFGLAR-IYSYQMALTPV 179
Query: 254 AGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
T Y APE+ D++S G + E+
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 67
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLD-------W 189
EA ++ + ++V+L G + +I + M RG L LR+ A+ +
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R ++
Sbjct: 128 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 184
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 185 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 11/215 (5%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLS 142
+V E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLK 61
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
++ H NIVKL + ++L+++++ + + + I L K + + +
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQG 119
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
L++ H ++HRD+ N+L+N++ +ADFG+AR T T Y AP
Sbjct: 120 LAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 263 E-LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
E L + D++S G + E++ R PGD
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + A+ K + T + E F EA +
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ LD + ++ A
Sbjct: 67 QFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTA 123
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L++S + DFG++R + DS+ G ++
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTXXKASKGKLPIKWM 179
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 64
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R ++
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 182 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 10/205 (4%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+D + +GTG + V A+ +K+ K E S + E +L +I+H NIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
L ++LI + + G LF + D ++ ++ + A+ YLH
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLHD-- 134
Query: 211 IPSIVHRDISSNNIL---LNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
IVHRD+ N+L L+ + ++DFG++++ S + GT GY+APE+
Sbjct: 135 -LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVAPEVLAQ 192
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
++ D +S GV+A +L G P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 97/222 (43%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 71
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R +
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXX 188
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 189 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 91 FDIKYCIGTGGYGSVYRAQ-LPSGKKVALK-----KLHHSETELAFLESFQTEAHLLSQI 144
F+ K +GTG + V A+ +GK A+K L E+ S + E +L +I
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES------SIENEIAVLRKI 77
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
+H NIV L ++L+ + + G LF + D + +++ + A+
Sbjct: 78 KHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDAS---TLIRQVLDAVY 134
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEA---FVADFGVARLLHSDSSNRTVVAGTHGYIA 261
YLH IVHRD+ N+L S+ E ++DFG++++ + GT GY+A
Sbjct: 135 YLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMSTACGTPGYVA 190
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ ++ D +S GV+A +L G P
Sbjct: 191 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 221
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 70
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R ++
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 188 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 68
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R ++
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 185
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 186 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 70
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 71 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R ++
Sbjct: 131 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 187
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 188 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 120/271 (44%), Gaps = 34/271 (12%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G +G VY+ L + VA+K L + E E F+ EA L ++++H N+V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSL--FCILR---------NDDEAIR--LDWTKRVNIVK 197
L G + + +I+ Y G L F ++R +DD ++ L+ V++V
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + YL +VH+D+++ N+L+ KL ++D G+ R +++ + +
Sbjct: 136 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 258 G--YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVP 314
++APE + D++S+GVV EV G P N ++ + Q +P
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP--YCGYSNQDVVEMIRNRQVLP 250
Query: 315 SPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
P D V ++ C P+ RP
Sbjct: 251 CPDDCPA------WVYALMIECWNEFPSRRP 275
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 71
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 72 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R ++
Sbjct: 132 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 188
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 189 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 120/271 (44%), Gaps = 34/271 (12%)
Query: 97 IGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+G +G VY+ L + VA+K L + E E F+ EA L ++++H N+V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSL--FCILR---------NDDEAIR--LDWTKRVNIVK 197
L G + + +I+ Y G L F ++R +DD ++ L+ V++V
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + YL +VH+D+++ N+L+ KL ++D G+ R +++ + +
Sbjct: 153 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 258 G--YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQRVP 314
++APE + D++S+GVV EV G P N ++ + Q +P
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP--YCGYSNQDVVEMIRNRQVLP 267
Query: 315 SPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
P D V ++ C P+ RP
Sbjct: 268 CPDDCPA------WVYALMIECWNEFPSRRP 292
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 38/284 (13%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 64
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N + + DFG+ R ++
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYY 181
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV-LMGRHPGDLLSS--VNP 301
R G G +++PE V T DV+SFGVV E+ + P LS+ V
Sbjct: 182 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLR 238
Query: 302 KIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+M LLD+ P D++L +++ C + P RP
Sbjct: 239 FVMEGGLLDKPDNCP--------DMLL--ELMRMCWQYNPKMRP 272
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + LS+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLSFC 119
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 17/205 (8%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
IG G + V A+ + +GK+VA++ + ++ + L+ E ++ + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFE 80
Query: 155 FCLHKKCMFLIYKYMRRGSLFCIL----RNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
+K ++L+ +Y G +F L R ++ R + + + A+ Y H
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF-------RQIVSAVQYCHQKF 133
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVL 270
IVHRD+ + N+LL++ + +ADFG + + + G+ Y APEL
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFSNEF-TFGNKLDEFCGSPPYAAPELFQGKKY 189
Query: 271 T-EKCDVYSFGVVALEVLMGRHPGD 294
+ DV+S GV+ ++ G P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS---ADI 142
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 199
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + AL K + T + E F EA +
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 63
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ LD + ++ A
Sbjct: 64 QFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTA 120
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L++S + DFG++R + DS+ G ++
Sbjct: 121 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 176
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 177 APESINFRRFTSASDVWMFGVCMWEILM 204
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + AL K + T + E F EA +
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ + LD + ++ A
Sbjct: 67 QFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTA 123
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L++S + DFG++R + DS+ G ++
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 179
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + AL K + T + E F EA +
Sbjct: 10 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 69
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ LD + ++ A
Sbjct: 70 QFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTA 126
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L++S + DFG++R + DS+ G ++
Sbjct: 127 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 182
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 183 APESINFRRFTSASDVWMFGVCMWEILM 210
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
IG+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 151
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 208
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 209 VDIWSVGCIMAELLTGR 225
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 28/206 (13%)
Query: 96 CIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQT-EAHLLS--QIRHRNIVK 151
+G+G +G+V++ +P G+ + + + + +SFQ H+L+ + H +IV+
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 97
Query: 152 LYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR----LDWTKRVNIVKSMAHALSYLH 207
L G C + L+ +Y+ GSL +R A+ L+W V I K M + +
Sbjct: 98 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGMYYLEEH-- 152
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD------SSNRTVVAGTHGYIA 261
+VHR++++ N+LL S + VADFGVA LL D S +T + ++A
Sbjct: 153 -----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK----WMA 203
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL 287
E + T + DV+S+GV E++
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELM 229
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 68
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + AL K + T + E F EA +
Sbjct: 9 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 68
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ LD + ++ A
Sbjct: 69 QFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTA 125
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L++S + DFG++R + DS+ G ++
Sbjct: 126 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 181
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 182 APESINFRRFTSASDVWMFGVCMWEILM 209
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + AL K + T + E F EA +
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 71
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ LD + ++ A
Sbjct: 72 QFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTA 128
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L++S + DFG++R + DS+ G ++
Sbjct: 129 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 184
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 185 APESINFRRFTSASDVWMFGVCMWEILM 212
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 91 FDIKYCIGTGGYGSVYRAQ------LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI 144
+D + +GTG + V A+ L + K +A K L E S + E +L +I
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG------SMENEIAVLHKI 73
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
+H NIV L ++LI + + G LF + D ++ ++ + A+
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVK 130
Query: 205 YLHCDCIPSIVHRDISSNNIL---LNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
YLH IVHRD+ N+L L+ + ++DFG++++ S + GT GY+A
Sbjct: 131 YLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM-EDPGSVLSTACGTPGYVA 186
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ ++ D +S GV+A +L G P
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPP 217
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQT 136
E VA E + +G G +G VY + +VA+K ++ + + +E F
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE-FLN 99
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ + ++V+L G + +I + M RG L LR N+
Sbjct: 100 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+K + + +A ++YL+ + VHRD+++ N ++ + DFG+ R ++
Sbjct: 160 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY 216
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G +++PE V T DV+SFGVV E+
Sbjct: 217 RK---GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 142
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA-TRWYRAPEIMLNWMHYNQT 199
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 166
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGXVA-TRWYRAPEIMLNWMHYNQT 223
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 224 VDIWSVGCIMAELLTGR 240
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGFVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + AL K + T + E F EA +
Sbjct: 35 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 94
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ + LD + ++ A
Sbjct: 95 QFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTA 151
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L++S + DFG++R + DS+ G ++
Sbjct: 152 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 207
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 208 APESINFRRFTSASDVWMFGVCMWEILM 235
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 93 IKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
++ IG G +G V+R + G++VA+K E F E+ E + +RH NI+
Sbjct: 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREA---EIYQTVMLRHENIL-- 99
Query: 153 YGFCLHKK-------CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
GF ++L+ Y GSLF L + + + S A L++
Sbjct: 100 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 154
Query: 206 LHCDCI-----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----G 255
LH + + P+I HRD+ S NIL+ +AD G+A + H +++ +A G
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 213
Query: 256 THGYIAPEL---AYTMVLTE---KCDVYSFGVVALEV 286
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
IG G + V A+ + +GK+VA+K + ++ + L+ E + + H NIVKL+
Sbjct: 21 TIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFE 80
Query: 155 FCLHKKCMFLIYKYMRRGSLFCIL----RNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
+K ++L+ +Y G +F L R ++ R + + + A+ Y H
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKF-------RQIVSAVQYCHQKF 133
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVL 270
IVHRD+ + N+LL++ +ADFG + + + G Y APEL
Sbjct: 134 ---IVHRDLKAENLLLDADXNIKIADFGFSNEF-TFGNKLDAFCGAPPYAAPELFQGKKY 189
Query: 271 T-EKCDVYSFGVVALEVLMGRHPGD 294
+ DV+S GV+ ++ G P D
Sbjct: 190 DGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 142
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 199
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 68
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 214
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 28/206 (13%)
Query: 96 CIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEA-HLLS--QIRHRNIVK 151
+G+G +G+V++ +P G+ + + + + +SFQ H+L+ + H +IV+
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVR 79
Query: 152 LYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIR----LDWTKRVNIVKSMAHALSYLH 207
L G C + L+ +Y+ GSL +R A+ L+W V I K M + +
Sbjct: 80 LLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG--VQIAKGMYYLEEH-- 134
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSD------SSNRTVVAGTHGYIA 261
+VHR++++ N+LL S + VADFGVA LL D S +T + ++A
Sbjct: 135 -----GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK----WMA 185
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVL 287
E + T + DV+S+GV E++
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELM 211
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 156
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 157 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 213
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 214 VDIWSVGCIMAELLTGR 230
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 98/211 (46%), Gaps = 20/211 (9%)
Query: 91 FDIKYCIGTGGYGSVY---RAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
F++ +G G +G V+ + P SG A+K L + ++ + E +L+ + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 147 RNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAH 201
+VKL Y F K ++LI ++R G LF L + +E ++ + +A
Sbjct: 90 PFVVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKF-------YLAELAL 141
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
L +LH I++RD+ NILL+ + + DFG+++ GT Y+A
Sbjct: 142 GLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ + D +S+GV+ E+L G P
Sbjct: 199 PEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 165
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 222
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 223 VDIWSVGCIMAELLTGR 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 166
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 223
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 224 VDIWSVGCIMAELLTGR 240
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 79 ITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEA 138
I QE + E +I IG G +G VY + +VA++ + L++F+ E
Sbjct: 23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREV 80
Query: 139 HLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS 198
Q RH N+V G C+ + +I + +L+ ++R D I LD K I +
Sbjct: 81 MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR--DAKIVLDVNKTRQIAQE 138
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR-----TVV 253
+ + YLH I+H+D+ S N+ ++ + + DFG+ + + R +
Sbjct: 139 IVKGMGYLHAK---GILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQ 194
Query: 254 AGTHGYIAPELAYTMV---------LTEKCDVYSFGVVALEV 286
G ++APE+ + ++ DV++ G + E+
Sbjct: 195 NGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 174
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 157
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 158 IHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 214
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 215 VDIWSVGCIMAELLTGR 231
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEI 175
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 151
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 152 IHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 208
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 209 VDIWSVGCIMAELLTGR 225
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 47/281 (16%)
Query: 92 DIKY--CIGTGGYGSVYRAQLPSGK---KVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
DIK+ IG G +G V +A++ A+K++ ++ F E +L ++ H
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDH-RDFAGELEVLCKLGH 81
Query: 147 R-NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRN-------------DDEAIRLDWTKR 192
NI+ L G C H+ ++L +Y G+L LR + A L +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
++ +A + YL +HR++++ NIL+ A +ADFG++R
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR------GQEVY 192
Query: 253 VAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLI 306
V T G ++A E V T DV+S+GV+ E++ +G P ++ L
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE----LY 248
Query: 307 DLLDQ--RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ L Q R+ P++ + D++ C R KP RP
Sbjct: 249 EKLPQGYRLEKPLNCDDEVYDLMR------QCWREKPYERP 283
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + A+ K + T + E F EA +
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ + LD + ++ A
Sbjct: 67 QFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTA 123
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L++S + DFG++R + DS+ G ++
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 179
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 90 DFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLES-FQTEAHLLSQIRHR 147
++ I +G G +G V A +G+KVALK ++ + ++ + E L +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+I+KLY K + ++ +Y I++ D ++ + + + A+ Y H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 120
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAY 266
IVHRD+ N+LL+ L +ADFG++ ++ +D + G+ Y APE ++
Sbjct: 121 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 176
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGD 294
+ + DV+S GV+ +L R P D
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + A+ K + T + E F EA +
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 446
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ LD + ++ A
Sbjct: 447 QFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTA 503
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L++S + DFG++R + DS+ G ++
Sbjct: 504 LAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 559
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 560 APESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 93 IKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
++ IG G +G V+R + G++VA+K E F E+ E + +RH NI+
Sbjct: 33 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREA---EIYQTVMLRHENIL-- 86
Query: 153 YGFCLHKK-------CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
GF ++L+ Y GSLF L + + + S A L++
Sbjct: 87 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 141
Query: 206 LHCDCI-----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----G 255
LH + + P+I HRD+ S NIL+ +AD G+A + H +++ +A G
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 200
Query: 256 THGYIAPEL---AYTMVLTE---KCDVYSFGVVALEV 286
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 143
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 200
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 201 VDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 142
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 143 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 199
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 200 VDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 144
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 145 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 201
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 202 VDIWSVGCIMAELLTGR 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 151
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 208
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 209 VDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 145
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 146 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 202
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 203 VDIWSVGCIMAELLTGR 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 148
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 205
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 206 VDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 157
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 158 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 214
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 215 VDIWSVGCIMAELLTGR 231
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 143
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 144 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 200
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 201 VDIWSVGCIMAELLTGR 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 169
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 226
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 227 VDIWSVGCIMAELLTGR 243
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 90 DFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLES-FQTEAHLLSQIRHR 147
++ I +G G +G V A +G+KVALK ++ + ++ + E L +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+I+KLY K + ++ +Y I++ D ++ + + + A+ Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 124
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAY 266
IVHRD+ N+LL+ L +ADFG++ ++ +D + G+ Y APE ++
Sbjct: 125 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 180
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGD 294
+ + DV+S GV+ +L R P D
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNAMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 166
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 167 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 223
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 224 VDIWSVGCIMAELLTGR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 165
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 166 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 222
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 223 VDIWSVGCIMAELLTGR 239
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 158
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 215
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 216 VDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 158
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 215
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 216 VDIWSVGCIMAELLTGR 232
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 152
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 209
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 210 VDIWSVGCIMAELLTGR 226
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 152
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 209
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 210 VDIWSVGCIMAELLTGR 226
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 93 IKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
++ IG G +G V+R + G++VA+K E F E+ E + +RH NI+
Sbjct: 13 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREA---EIYQTVMLRHENIL-- 66
Query: 153 YGFCLHKK-------CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
GF ++L+ Y GSLF L + + + S A L++
Sbjct: 67 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 121
Query: 206 LHCDCI-----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----G 255
LH + + P+I HRD+ S NIL+ +AD G+A + H +++ +A G
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 180
Query: 256 THGYIAPEL---AYTMVLTE---KCDVYSFGVVALEV 286
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 153
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 210
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 211 VDIWSVGCIMAELLTGR 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 151
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 152 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 208
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 209 VDIWSVGCIMAELLTGR 225
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 93 IKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
++ IG G +G V+R + G++VA+K E F E+ E + +RH NI+
Sbjct: 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREA---EIYQTVMLRHENIL-- 60
Query: 153 YGFCLHKK-------CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
GF ++L+ Y GSLF L + + + S A L++
Sbjct: 61 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 115
Query: 206 LHCDCI-----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----G 255
LH + + P+I HRD+ S NIL+ +AD G+A + H +++ +A G
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 174
Query: 256 THGYIAPEL---AYTMVLTE---KCDVYSFGVVALEV 286
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 148
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 205
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 206 VDIWSVGCIMAELLTGR 222
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 93 IKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
++ IG G +G V+R + G++VA+K E F E+ E + +RH NI+
Sbjct: 10 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREA---EIYQTVMLRHENIL-- 63
Query: 153 YGFCLHKK-------CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
GF ++L+ Y GSLF L + + + S A L++
Sbjct: 64 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 118
Query: 206 LHCDCI-----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----G 255
LH + + P+I HRD+ S NIL+ +AD G+A + H +++ +A G
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 177
Query: 256 THGYIAPEL---AYTMVLTE---KCDVYSFGVVALEV 286
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 33/270 (12%)
Query: 97 IGTGGYGSVYR------AQLPSGK---KVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+G GG+ Y ++ +GK K L K H E TE + + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-------KMSTEIAIHKSLDNP 102
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
++V +GF ++++ + RR SL + + + ++ + YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR---YFMRQTIQGVQYLH 159
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
+ ++HRD+ N+ LN ++ + DFG+A + D + + GT YIAPE+
Sbjct: 160 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCK 216
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDII 327
+ + D++S G + +L+G+ P + S + + I + VP I+
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRIKKNEYSVPRHINP-------- 267
Query: 328 LVSKIVFACLRSKPTSRP--MQRVSQEFLV 355
+ S ++ L + PT RP + ++ EF
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 35/217 (16%)
Query: 93 IKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
++ IG G +G V+R + G++VA+K E F E+ E + +RH NI+
Sbjct: 8 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREA---EIYQTVMLRHENIL-- 61
Query: 153 YGFCLHKK-------CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
GF ++L+ Y GSLF L + + + S A L++
Sbjct: 62 -GFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVE----GMIKLALSTASGLAH 116
Query: 206 LHCDCI-----PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-----G 255
LH + + P+I HRD+ S NIL+ +AD G+A + H +++ +A G
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTIDIAPNHRVG 175
Query: 256 THGYIAPEL---AYTMVLTE---KCDVYSFGVVALEV 286
T Y+APE+ + M E + D+Y+ G+V E+
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 148
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 149 IHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 205
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 206 VDIWSVGCIMAELLTGR 222
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 90 DFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLES-FQTEAHLLSQIRHR 147
++ I +G G +G V A +G+KVALK ++ + ++ + E L +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+I+KLY K + ++ +Y I++ D ++ + + + A+ Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 130
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAY 266
IVHRD+ N+LL+ L +ADFG++ ++ +D + G+ Y APE ++
Sbjct: 131 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 186
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGD 294
+ + DV+S GV+ +L R P D
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 158
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 159 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 215
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 216 VDIWSVGCIMAELLTGR 232
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 90 DFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLES-FQTEAHLLSQIRHR 147
++ I +G G +G V A +G+KVALK ++ + ++ + E L +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+I+KLY K + ++ +Y I++ D ++ + + + A+ Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCH 129
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAY 266
IVHRD+ N+LL+ L +ADFG++ ++ +D + G+ Y APE ++
Sbjct: 130 RH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVISG 185
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGD 294
+ + DV+S GV+ +L R P D
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 148
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 149 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 205
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 206 VDIWSVGCIMAELLTGR 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 169
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 170 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMXGYVA-TRWYRAPEIMLNWMHYNQT 226
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 227 VDIWSVGCIMAELLTGR 243
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 21/255 (8%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSG----KKVALKKLHHSE--TELAFLESFQTEAH 139
V E+F++ +GTG YG V+ + SG K A+K L + + E +TE
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 140 LLSQIRHRN-IVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI-V 196
+L IR +V L Y F K + LI Y+ G LF L + V I V
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETK-LHLILDYINGGELFTHLSQRERFTE----HEVQIYV 165
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV-VAG 255
+ AL +LH I++RDI NILL+S + DFG+++ +D + R G
Sbjct: 166 GEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCG 222
Query: 256 THGYIAPEL--AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLI-DLLDQR 312
T Y+AP++ + D +S GV+ E+L G P + N + + +L
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE 282
Query: 313 VPSPIDDQTVIQDII 327
P P + + +D+I
Sbjct: 283 PPYPQEMSALAKDLI 297
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 94/223 (42%), Gaps = 29/223 (13%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
DF+ C+G GG+G V+ A+ A+K++ ELA E E L+++ H
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA-REKVMREVKALAKLEHPG 64
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKR------------VNIV 196
IV+ + L K + + L+ ++ + DW ++I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA-- 254
+A A+ +LH ++HRD+ +NI V DFG+ + D +TV+
Sbjct: 125 LQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 255 ----------GTHGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
GT Y++PE + + K D++S G++ E+L
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 10/207 (4%)
Query: 91 FDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNI 149
+++ IGTGG+ V A + +G+ VA+K + T + L +TE L +RH++I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
+LY +F++ +Y G LF + + D RL + + + + A++Y+H
Sbjct: 71 CQLYHVLETANKIFMVLEYCPGGELFDYIISQD---RLSEEETRVVFRQIVSAVAYVHSQ 127
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGV-ARLLHSDSSNRTVVAGTHGYIAPELAY-T 267
HRD+ N+L + + + DFG+ A+ + + G+ Y APEL
Sbjct: 128 ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHPGD 294
L + DV+S G++ ++ G P D
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 18/219 (8%)
Query: 79 ITFQEMIVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTE 137
+ FQ M E+ +G G + V R ++ +G++ A K ++ + + + E
Sbjct: 18 LYFQSMYQLFEE------LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLERE 71
Query: 138 AHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
A + ++H NIV+L+ + +LI+ + G LF ++ + ++ +
Sbjct: 72 ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF------EDIVAREYYSEADASH 125
Query: 198 SMAHAL-SYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVV 253
+ L + LHC + +VHRD+ N+LL SKL+ +ADFG+A + +
Sbjct: 126 CIQQILEAVLHCHQM-GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGF 184
Query: 254 AGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
AGT GY++PE+ + D+++ GV+ +L+G P
Sbjct: 185 AGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 33/270 (12%)
Query: 97 IGTGGYGSVYR------AQLPSGK---KVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+G GG+ Y ++ +GK K L K H E TE + + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-------KMSTEIAIHKSLDNP 102
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
++V +GF ++++ + RR SL + + + ++ + YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR---YFMRQTIQGVQYLH 159
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
+ ++HRD+ N+ LN ++ + DFG+A + D + + GT YIAPE+
Sbjct: 160 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCK 216
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDII 327
+ + D++S G + +L+G+ P + S + + I + VP I+
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRIKKNEYSVPRHINP-------- 267
Query: 328 LVSKIVFACLRSKPTSRP--MQRVSQEFLV 355
+ S ++ L + PT RP + ++ EF
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 119/276 (43%), Gaps = 47/276 (17%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
DF IG+GG+G V++A+ GK +K++ ++ E + E L+++ H N
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVN 65
Query: 149 IVKLYGFCL-----------------HKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
IV Y C KC+F+ ++ +G+L + +LD
Sbjct: 66 IVH-YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVL 123
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRT 251
+ + + + + Y+H +++RD+ +NI L + + DFG+ L +D R
Sbjct: 124 ALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-RX 179
Query: 252 VVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQ 311
GT Y++PE + ++ D+Y+ G++ E+L H D ++ DL D
Sbjct: 180 RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCD--TAFETSKFFTDLRDG 234
Query: 312 RVPSPID--DQTVIQDIILVSKIVFACLRSKPTSRP 345
+ D ++T++Q + L KP RP
Sbjct: 235 IISDIFDKKEKTLLQKL----------LSKKPEDRP 260
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 24/205 (11%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLES-FQTEAHLLSQIRHRNIVKLYG 154
+G+G + V+ Q +GK ALK + S AF +S + E +L +I+H NIV L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSP---AFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN--IVKSMAHALSYLHCDCIP 212
+L+ + + G LF D R +T++ +++ + A+ YLH +
Sbjct: 74 IYESTTHYYLVMQLVSGGELF-----DRILERGVYTEKDASLVIQQVLSAVKYLHEN--- 125
Query: 213 SIVHRDISSNNILL-----NSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
IVHRD+ N+L NSK+ + DFG++++ + + GT GY+APE+
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKI--MITDFGLSKM--EQNGIMSTACGTPGYVAPEVLAQ 181
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHP 292
++ D +S GV+ +L G P
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPP 206
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALK---KLHHSETELAFLESFQTEAHLLS 142
+ E ++ CIG G +G V++ S + A+ K + T + E F EA +
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q H +IVKL G + + +++I + G L L+ LD + ++ A
Sbjct: 67 QFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLSTA 123
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GYI 260
L+YL VHRDI++ N+L+++ + DFG++R + DS+ G ++
Sbjct: 124 LAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKWM 179
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLM 288
APE T DV+ FGV E+LM
Sbjct: 180 APESINFRRFTSASDVWMFGVCMWEILM 207
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 152
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 153 IHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 209
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 210 VDIWSVGCIMAELLTGR 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 129/280 (46%), Gaps = 30/280 (10%)
Query: 79 ITFQEMIVATEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTE 137
I Q V +D + +G G YG V + + +PSG+ +A+K++ A + S + +
Sbjct: 41 IGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR------ATVNSQEQK 94
Query: 138 AHLLS-QIRHRNI-----VKLYGFCLHKKCMFLIYKYMRRG--SLFCILRNDDEAIRLDW 189
L+ I R + V YG + +++ + M + + + + I D
Sbjct: 95 RLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDI 154
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
++ + S+ AL +LH S++HRD+ +N+L+N+ + + DFG++ L DS
Sbjct: 155 LGKIAV--SIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL-VDSVA 209
Query: 250 RTVVAGTHGYIAPELAYTMV----LTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIML 305
+T+ AG Y+APE + + K D++S G+ +E+ + R P D S P L
Sbjct: 210 KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD--SWGTPFQQL 267
Query: 306 IDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
++++ P D+ + + S+ CL+ RP
Sbjct: 268 KQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERP 303
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 72/150 (48%), Gaps = 9/150 (6%)
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
H NIVKL+ + FL+ + + G LF ++ + T+ I++ + A+S+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIK---KKKHFSETEASYIMRKLVSAVSH 121
Query: 206 LHCDCIPSIVHRDISSNNILL---NSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
+H +VHRD+ N+L N LE + DFG ARL D+ T Y AP
Sbjct: 122 MH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
EL E CD++S GV+ +L G+ P
Sbjct: 179 ELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 152
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M +
Sbjct: 153 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 209
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 210 VDIWSVGCIMAELLTGR 226
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 116/263 (44%), Gaps = 19/263 (7%)
Query: 90 DFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLES-FQTEAHLLSQIRHR 147
+F I+ IG G + VYRA L G VALKK+ + A + E LL Q+ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRV-NIVKSMAHALSYL 206
N++K Y + + ++ + G L ++++ + RL + V + AL ++
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H ++HRDI N+ + + + D G+ R S ++ + GT Y++PE +
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH 209
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP--GDLLS--SVNPKIMLIDLLDQRVPSPIDDQTV 322
K D++S G + E+ + P GD ++ S+ KI D P P D +
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY----PPLPSDHYSE 265
Query: 323 IQDIILVSKIVFACLRSKPTSRP 345
+ ++V C+ P RP
Sbjct: 266 -----ELRQLVNMCINPDPEKRP 283
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 33/270 (12%)
Query: 97 IGTGGYGSVYR------AQLPSGK---KVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+G GG+ Y ++ +GK K L K H E TE + + +
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-------KMSTEIAIHKSLDNP 86
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
++V +GF ++++ + RR SL + + + ++ + YLH
Sbjct: 87 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR---YFMRQTIQGVQYLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
+ ++HRD+ N+ LN ++ + DFG+A + D + + GT YIAPE+
Sbjct: 144 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 200
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDII 327
+ + D++S G + +L+G+ P + S + + I + VP I+
Sbjct: 201 KGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRIKKNEYSVPRHINP-------- 251
Query: 328 LVSKIVFACLRSKPTSRP--MQRVSQEFLV 355
+ S ++ L + PT RP + ++ EF
Sbjct: 252 VASALIRRMLHADPTLRPSVAELLTDEFFT 281
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 11/197 (5%)
Query: 97 IGTGGYGSVYRAQLPSGKK-VALKKL---HHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
+G G + +VY+A+ + + VA+KK+ H SE + + E LL ++ H NI+ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
HK + L++ +M L I++++ + K ++ L YLH I
Sbjct: 78 LDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMT--LQGLEYLHQHWI- 133
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY-TMVLT 271
+HRD+ NN+LL+ +ADFG+A+ S + T Y APEL + +
Sbjct: 134 --LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYG 191
Query: 272 EKCDVYSFGVVALEVLM 288
D+++ G + E+L+
Sbjct: 192 VGVDMWAVGCILAELLL 208
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
+ DF +K +G G YG V A P+G+ VA+KK+ + L L + + E +L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 147 RNIVKLYGF----CLHKKCMFLIYKYMRRGSLFCILRND---DEAIRLDWTKRVNIVKSM 199
NI+ ++ I + + + L ++ D+ I+ +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-------FIYQT 121
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG---- 255
A+ LH +++HRD+ +N+L+NS + V DFG+AR++ +++ + G
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 256 ------THGYIAPELAYTMV-LTEKCDVYSFGVVALEVLMGR 290
T Y APE+ T + DV+S G + E+ + R
Sbjct: 179 MTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
+ DF +K +G G YG V A P+G+ VA+KK+ + L L + + E +L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 147 RNIVKLYGF----CLHKKCMFLIYKYMRRGSLFCILRND---DEAIRLDWTKRVNIVKSM 199
NI+ ++ I + + + L ++ D+ I+ +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-------FIYQT 121
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG---- 255
A+ LH +++HRD+ +N+L+NS + V DFG+AR++ +++ + G
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 256 ------THGYIAPELAYTMV-LTEKCDVYSFGVVALEVLMGR 290
T Y APE+ T + DV+S G + E+ + R
Sbjct: 179 MVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 14/209 (6%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKK----VALKKLHHSETELAFLESFQTEAHLL 141
+ E ++ CIG G +G V++ S + VA+K + ++ + E F EA +
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSD-SVREKFLQEALTM 445
Query: 142 SQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
Q H +IVKL G + + +++I + G L L+ LD + ++
Sbjct: 446 RQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQV--RKFSLDLASLILYAYQLST 502
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH--GY 259
AL+YL VHRDI++ N+L+++ + DFG++R + DS+ G +
Sbjct: 503 ALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYME-DSTYYKASKGKLPIKW 558
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVLM 288
+APE T DV+ FGV E+LM
Sbjct: 559 MAPESINFRRFTSASDVWMFGVCMWEILM 587
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 30/222 (13%)
Query: 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
+ DF +K +G G YG V A P+G+ VA+KK+ + L L + + E +L +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILKHFKH 68
Query: 147 RNIVKLYGF----CLHKKCMFLIYKYMRRGSLFCILRND---DEAIRLDWTKRVNIVKSM 199
NI+ ++ I + + + L ++ D+ I+ +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-------FIYQT 121
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG---- 255
A+ LH +++HRD+ +N+L+NS + V DFG+AR++ +++ + G
Sbjct: 122 LRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG 178
Query: 256 ------THGYIAPELAYTMV-LTEKCDVYSFGVVALEVLMGR 290
T Y APE+ T + DV+S G + E+ + R
Sbjct: 179 MTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 115/270 (42%), Gaps = 33/270 (12%)
Query: 97 IGTGGYGSVYR------AQLPSGK---KVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+G GG+ Y ++ +GK K L K H E TE + + +
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKE-------KMSTEIAIHKSLDNP 102
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
++V +GF ++++ + RR SL + + + ++ + YLH
Sbjct: 103 HVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEAR---YFMRQTIQGVQYLH 159
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
+ ++HRD+ N+ LN ++ + DFG+A + D + + GT YIAPE+
Sbjct: 160 NN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCK 216
Query: 268 MVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDII 327
+ + D++S G + +L+G+ P + S + + I + VP I+
Sbjct: 217 KGHSFEVDIWSLGCILYTLLVGKPPFE-TSCLKETYIRIKKNEYSVPRHINP-------- 267
Query: 328 LVSKIVFACLRSKPTSRP--MQRVSQEFLV 355
+ S ++ L + PT RP + ++ EF
Sbjct: 268 VASALIRRMLHADPTLRPSVAELLTDEFFT 297
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + D+G+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N ++ +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+ R H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQT---EAHLLSQIRHRNIVKL 152
IG G +G+VY A+ + + + VA+KK+ +S + E +Q E L ++RH N ++
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN--EKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
G L + +L+ +Y GS +L + ++ + + L+YLH
Sbjct: 120 RGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQE--VEIAAVTHGALQGLAYLHSH--- 173
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
+++HRD+ + NILL+ + DFG A ++ + GT ++APE+ M +
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPEVILAMDEGQ 229
Query: 273 ---KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILV 329
K DV+S G+ +E+ + P L ++N L + P+
Sbjct: 230 YDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNESPALQSGHWS----EYF 282
Query: 330 SKIVFACLRSKPTSRPMQRV--SQEFLVRK 357
V +CL+ P RP V F++R+
Sbjct: 283 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQT---EAHLLSQIRHRNIVKL 152
IG G +G+VY A+ + + + VA+KK+ +S + E +Q E L ++RH N ++
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSN--EKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 153 YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
G L + +L+ +Y GS +L + ++ + + L+YLH
Sbjct: 81 RGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQE--VEIAAVTHGALQGLAYLHSH--- 134
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
+++HRD+ + NILL+ + DFG A ++ + GT ++APE+ M +
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIM----APANXFVGTPYWMAPEVILAMDEGQ 190
Query: 273 ---KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILV 329
K DV+S G+ +E+ + P L ++N L + P+
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNESPALQSGHWS----EYF 243
Query: 330 SKIVFACLRSKPTSRPMQRV--SQEFLVRK 357
V +CL+ P RP V F++R+
Sbjct: 244 RNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV + + SG K+A+KKL + + E LL ++H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F Y+ + L N + +L ++ + L Y+H I
Sbjct: 119 FTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 175
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+D VA T Y APE+ M
Sbjct: 176 IHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNMT 232
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 233 VDIWSVGCIMAELLTGR 249
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 114/271 (42%), Gaps = 40/271 (14%)
Query: 97 IGTGGYGSVYRA----QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL 152
IG G +G VY Q + + A+K L TE+ +E+F E L+ + H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 153 YGFCLHKKCM-FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
G L + + ++ YM G L +R+ + ++ +A + YL
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYL---AE 142
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPELAY 266
VHRD+++ N +L+ VADFG+AR + D +V H + A E
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLD--------QRVPSPID 318
T T K DV+SFGV+ E LL+ P ID D +R+P P
Sbjct: 202 TYRFTTKSDVWSFGVLLWE---------LLTRGAPPYRHIDPFDLTHFLAQGRRLPQP-- 250
Query: 319 DQTVIQDIILVSKIVFACLRSKPTSRPMQRV 349
D + +++ C + P RP RV
Sbjct: 251 --EYCPDSLY--QVMQQCWEADPAVRPTFRV 277
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 63
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 121
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 178
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 179 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 211
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T Y APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 97 IGTGGYGSVYRAQLP-----SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +G V + +G++VA+K L E+ + + E +L + H NIVK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-PESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 152 LYGFCLHK--KCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKR--VNIVKSMAHALSYLH 207
G C + LI +++ GSL L + I L + V I K M + S +
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY 147
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPEL 264
VHRD+++ N+L+ S+ + + DFG+ + + +D TV + APE
Sbjct: 148 -------VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 200
Query: 265 AYTMVLTEKCDVYSFGVVALEVL 287
DV+SFGV E+L
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELL 223
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T Y APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 11/205 (5%)
Query: 93 IKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLE-SFQTEAHLLSQIRHRNIV 150
I+ +G G +G V A + +KVALK + + + + + E L +RH +I+
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
KLY + ++ +Y G LF + E R+ + + + A+ Y H
Sbjct: 73 KLYDVITTPTDIVMVIEYAG-GELFDYIV---EKKRMTEDEGRRFFQQIICAIEYCHRH- 127
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAYTMV 269
IVHRD+ N+LL+ L +ADFG++ ++ +D + G+ Y APE + +
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTSCGSPNYAAPEVINGKLY 184
Query: 270 LTEKCDVYSFGVVALEVLMGRHPGD 294
+ DV+S G+V +L+GR P D
Sbjct: 185 AGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 88 TEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
TE++ + +G G + V R ++ +G++ A ++ + + + EA + ++H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL-SY 205
NIV+L+ + +LI+ + G LF ++ + ++ + + L +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELF------EDIVAREYYSEADASHCIQQILEAV 123
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAP 262
LHC + +VHR++ N+LL SKL+ +ADFG+A + + AGT GY++P
Sbjct: 124 LHCHQM-GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP 182
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E+ + D+++ GV+ +L+G P
Sbjct: 183 EVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VAL K+ +ETE + E LL ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNH 61
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VAL K+ +ETE + E LL ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETE-GVPSTAIREISLLKELNH 60
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T T Y APE L
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 206
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 18/200 (9%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V++ + +G+ VA+KK SE + + E +L Q++H N+V L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMA----HALSYLH-CDC 210
K+ + L+++Y L E R ++VKS+ A+++ H +C
Sbjct: 71 FRRKRRLHLVFEYCDHTVLH-------ELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY-TMV 269
I HRD+ NIL+ + DFG ARLL S T Y +PEL
Sbjct: 124 I----HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 270 LTEKCDVYSFGVVALEVLMG 289
DV++ G V E+L G
Sbjct: 180 YGPPVDVWAIGCVFAELLSG 199
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 108/224 (48%), Gaps = 24/224 (10%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALK-----KLHHSETELAFLESF 134
FQ M+ + +++ +G+G + V + Q +GK+ A K +L S ++ E
Sbjct: 20 FQSMV--EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVS-REEI 76
Query: 135 QTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVN 194
+ E ++L +IRH NI+ L+ +K + LI + + G LF L + + T+
Sbjct: 77 EREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ--- 133
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILL------NSKLEAFVADFGVARLLHSDSS 248
+K + + YLH I H D+ NI+L N +++ + DFG+A + + +
Sbjct: 134 FLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNE 188
Query: 249 NRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 189 FKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 60/289 (20%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
DF IG+GG+G V++A+ GK ++++ ++ E + E L+++ H N
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN------EKAEREVKALAKLDHVN 66
Query: 149 IVKLYGFCLH------------------------------KKCMFLIYKYMRRGSLFCIL 178
IV Y C KC+F+ ++ +G+L +
Sbjct: 67 IVH-YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI 125
Query: 179 RNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFG 238
+LD + + + + + Y+H ++HRD+ +NI L + + DFG
Sbjct: 126 EKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFG 181
Query: 239 VARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSS 298
+ L +D RT GT Y++PE + ++ D+Y+ G++ E+L H D ++
Sbjct: 182 LVTSLKND-GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---HVCD--TA 235
Query: 299 VNPKIMLIDLLDQRVPSPID--DQTVIQDIILVSKIVFACLRSKPTSRP 345
DL D + D ++T++Q + L KP RP
Sbjct: 236 FETSKFFTDLRDGIISDIFDKKEKTLLQKL----------LSKKPEDRP 274
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 59
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 174
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 175 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 97 IGTGGYGSVYRAQLP-----SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK 151
+G G +G V + +G++VA+K L E+ + + E +L + H NIVK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-PESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 152 LYGFCLHK--KCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKR--VNIVKSMAHALSYLH 207
G C + LI +++ GSL L + I L + V I K M + S +
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY 135
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG---YIAPEL 264
VHRD+++ N+L+ S+ + + DFG+ + + +D TV + APE
Sbjct: 136 -------VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPEC 188
Query: 265 AYTMVLTEKCDVYSFGVVALEVL 287
DV+SFGV E+L
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELL 211
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLEES 146
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 147 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPEC 201
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 95 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLEES 146
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 147 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPEC 201
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 9/204 (4%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIV 150
+DI +G+G +G V+R + +V + K ++ L + + E +++Q+ H ++
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY-TVKNEISIMNQLHHPKLI 111
Query: 151 KLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
L+ K M LI +++ G LF + +D ++ + +N ++ L ++H
Sbjct: 112 NLHDAFEDKYEMVLILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH- 168
Query: 211 IPSIVHRDISSNNILLNSKLEAFVA--DFGVARLLHSDSSNRTVVAGTHGYIAPELAYTM 268
SIVH DI NI+ +K + V DFG+A L+ D + V T + APE+
Sbjct: 169 --SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK-VTTATAEFAAPEIVDRE 225
Query: 269 VLTEKCDVYSFGVVALEVLMGRHP 292
+ D+++ GV+ +L G P
Sbjct: 226 PVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 11/211 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQIRH 146
E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNH 62
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
NIVKL + ++L+++++ + + + I L K + + + L++
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LA 265
H ++HRD+ N+L+N++ +ADFG+AR T Y APE L
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 266 YTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ D++S G + E++ R PGD
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLEES 130
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 131 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--XYKAQTHGKWPVKWYAPEC 185
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 91 FDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNI 149
+++K +GTGG+G V R +G++VA+K+ E E + E ++ ++ H N+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ-ELSPKNRERWCLEIQIMKKLNHPNV 75
Query: 150 VKLYGF--CLHK----KCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
V L K L +Y G L L + L ++ ++ AL
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 204 SYLHCDCIPSIVHRDISSNNILLN---SKLEAFVADFGVARLLHSDSSNRTVVAGTHGYI 260
YLH + I+HRD+ NI+L +L + D G A+ L T GT Y+
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC-TEFVGTLQYL 191
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
APEL T D +SFG +A E + G P
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 91 FDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNI 149
+++K +GTGG+G V R +G++VA+K+ E E + E ++ ++ H N+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQ-ELSPKNRERWCLEIQIMKKLNHPNV 74
Query: 150 VKLYGF--CLHK----KCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
V L K L +Y G L L + L ++ ++ AL
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 204 SYLHCDCIPSIVHRDISSNNILLN---SKLEAFVADFGVARLLHSDSSNRTVVAGTHGYI 260
YLH + I+HRD+ NI+L +L + D G A+ L T GT Y+
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELC-TEFVGTLQYL 190
Query: 261 APELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
APEL T D +SFG +A E + G P
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + I L K + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 93 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLEES 144
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 145 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPEC 199
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + I L K + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 79 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLEES 130
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 131 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPEC 185
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 437 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLEES 488
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 489 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPEC 543
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 29/207 (14%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G YGSV Y A+L +KVA+KKL L E LL ++H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRND---DEAIRLDWTKRVNIVKSMAHALS 204
+ +L+ M L I+++ DE ++ +V + L
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMG-ADLNNIVKSQALSDEHVQF-------LVYQLLRGLK 145
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
Y+H I+HRD+ +N+ +N E + DFG+AR +D VA T Y APE+
Sbjct: 146 YIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVA-TRWYRAPEI 199
Query: 265 AYT-MVLTEKCDVYSFGVVALEVLMGR 290
M + D++S G + E+L G+
Sbjct: 200 MLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 60
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + I L K + + + L+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 175
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 176 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 85 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLEES 136
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 137 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPEC 191
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + FG+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 153
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+ + T T Y APE+ M +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--HT-ADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 211 VDIWSVGCIMAELLTGR 227
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 73 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLE-- 122
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 123 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPEC 179
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 153
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+ + T T Y APE+ M +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--HT-ADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 211 VDIWSVGCIMAELLTGR 227
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 61
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + I L K + + + L+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 176
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 177 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 209
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 438 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLEES 489
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 490 ---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPEC 544
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 103/209 (49%), Gaps = 26/209 (12%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G +G+V Y K VA+K L + + A + EA+++ Q+ + IV++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRND----DEAIRLDWTKRVNIVKSMAHALSYLHCD 209
G C + M L+ + G L L+ + D+ I + +V ++ + YL
Sbjct: 75 GICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNI-------IELVHQVSMGMKYLE-- 124
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG-----YIAPEL 264
+ VHRD+++ N+LL ++ A ++DFG+++ L +D + A THG + APE
Sbjct: 125 -ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQTHGKWPVKWYAPEC 181
Query: 265 AYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
+ K DV+SFGV+ E G+ P
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 153
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DFG+AR H+ + T T Y APE+ M +
Sbjct: 154 IHRDLKPSNLAVNEDCELKILDFGLAR--HT-ADEMTGYVATRWYRAPEIMLNWMHYNQT 210
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 211 VDIWSVGCIMAELLTGR 227
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 77 GRITFQEMIVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALK-----KLHHSETELAF 130
G TF++ V + +++ +G+G + V + Q +GK+ A K +L S ++
Sbjct: 1 GMSTFRQEDVE-DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVS- 58
Query: 131 LESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT 190
E + E ++L +IRH NI+ L+ +K + LI + + G LF L + + T
Sbjct: 59 REEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT 118
Query: 191 KRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILL------NSKLEAFVADFGVARLLH 244
+ +K + + YLH I H D+ NI+L N +++ + DFG+A +
Sbjct: 119 Q---FLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIE 170
Query: 245 SDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + + + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 171 AGNEFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 19/208 (9%)
Query: 91 FDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNI 149
F+++ +G G VYR Q + K ALK L + + + +TE +L ++ H NI
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDK----KIVRTEIGVLLRLSHPNI 110
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKR--VNIVKSMAHALSYLH 207
+KL + L+ + + G LF D + +++R + VK + A++YLH
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELF-----DRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
+ IVHRD+ N+L + +ADFG+++++ +TV GT GY APE+
Sbjct: 166 EN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV-CGTPGYCAPEI 221
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ D++S G++ +L G P
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + DF +AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 11/213 (5%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQLP-SGKKVALKKLH-HSETELAFLESFQTEAHLLSQI 144
+ E+F IG G YG VY+A+ +G+ VALKK+ +ETE + E LL ++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKEL 62
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
H NIVKL + ++L+++++ + + + I L K + + + L+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE- 263
+ H ++HRD+ N+L+N++ +ADFG+AR T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEI 177
Query: 264 LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
L + D++S G + E++ R PGD
Sbjct: 178 LLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGD 210
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 27/206 (13%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G YGSV Y A+L +KVA+KKL L E LL ++H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 154 G-FCLHKKCMFLIYKYMRRGSLFCILRN-------DDEAIRLDWTKRVNIVKSMAHALSY 205
F Y+ + L N DE ++ +V + L Y
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-------LVYQLLRGLKY 138
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELA 265
+H I+HRD+ +N+ +N E + DFG+AR +D VA T Y APE+
Sbjct: 139 IHS---AGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVA-TRWYRAPEIM 192
Query: 266 YT-MVLTEKCDVYSFGVVALEVLMGR 290
M + D++S G + E+L G+
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + D G+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPSGK-----KVALKKLHHSETELAFLESFQTEAHLLSQI 144
DF IG G +G V A+ + + KV KK + E + S + LL +
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNV--LLKNV 96
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
+H +V L+ ++ + Y+ G LF L+ E L+ R +A AL
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQR--ERCFLEPRARF-YAAEIASALG 153
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
YLH +IV+RD+ NILL+S+ + DFG+ + +S + GT Y+APE+
Sbjct: 154 YLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEV 210
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ D + G V E+L G P
Sbjct: 211 LHKQPYDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 29/287 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPS--GKKVALK-KLHHSETELAFLESFQTEAHLLS 142
+A ED + +G G +G VY + G+K+ + K + L E F +EA ++
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT--KRVNIVKSMA 200
+ H +IVKL G + ++ ++I + G L L + ++++ + I K+MA
Sbjct: 65 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 123
Query: 201 HALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGY 259
+ L ++C VHRDI+ NIL+ S + DFG++R + D +V +
Sbjct: 124 Y-LESINC------VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 176
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSP 316
++PE T DV+ F V E+L G+ P L + + +I +L++ R+P P
Sbjct: 177 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VIGVLEKGDRLPKP 232
Query: 317 IDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLVRKTLYQLK 363
V+ ++ C P+ RP R ++ +YQ++
Sbjct: 233 DLCPPVLYTLMT------RCWDYDPSDRP--RFTELVCSLSDVYQME 271
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 103/214 (48%), Gaps = 22/214 (10%)
Query: 91 FDIKYCIGTGGYGSVYR-AQLPSGKKVALK-----KLHHSETELAFLESFQTEAHLLSQI 144
+++ +G+G + V + Q +GK+ A K +L S ++ E + E ++L +I
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVS-REEIEREVNILREI 65
Query: 145 RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
RH NI+ L+ +K + LI + + G LF L + + T+ +K + +
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ---FLKQILDGVH 122
Query: 205 YLHCDCIPSIVHRDISSNNILL------NSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258
YLH I H D+ NI+L N +++ + DFG+A + + + + + GT
Sbjct: 123 YLHS---KRIAHFDLKPENIMLLDKNVPNPRIK--LIDFGIAHKIEAGNEFKNIF-GTPE 176
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
++APE+ L + D++S GV+ +L G P
Sbjct: 177 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 29/287 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPS--GKKVALK-KLHHSETELAFLESFQTEAHLLS 142
+A ED + +G G +G VY + G+K+ + K + L E F +EA ++
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT--KRVNIVKSMA 200
+ H +IVKL G + ++ ++I + G L L + ++++ + I K+MA
Sbjct: 81 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 139
Query: 201 HALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGY 259
+ L ++C VHRDI+ NIL+ S + DFG++R + D +V +
Sbjct: 140 Y-LESINC------VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 192
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSP 316
++PE T DV+ F V E+L G+ P L + + +I +L++ R+P P
Sbjct: 193 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VIGVLEKGDRLPKP 248
Query: 317 IDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLVRKTLYQLK 363
V+ ++ C P+ RP R ++ +YQ++
Sbjct: 249 DLCPPVLYTLMT------RCWDYDPSDRP--RFTELVCSLSDVYQME 287
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + D G+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 27/206 (13%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
+G+G YGSV Y A+L +KVA+KKL L E LL ++H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 154 G-FCLHKKCMFLIYKYMRRGSLFCILRN-------DDEAIRLDWTKRVNIVKSMAHALSY 205
F Y+ + L N DE ++ +V + L Y
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-------LVYQLLRGLKY 146
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELA 265
+H I+HRD+ +N+ +N E + DFG+AR +D VA T Y APE+
Sbjct: 147 IHS---AGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVA-TRWYRAPEIM 200
Query: 266 YT-MVLTEKCDVYSFGVVALEVLMGR 290
M + D++S G + E+L G+
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 131/287 (45%), Gaps = 29/287 (10%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPS--GKKVALK-KLHHSETELAFLESFQTEAHLLS 142
+A ED + +G G +G VY + G+K+ + K + L E F +EA ++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT--KRVNIVKSMA 200
+ H +IVKL G + ++ ++I + G L L + ++++ + I K+MA
Sbjct: 69 NLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMA 127
Query: 201 HALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH-SDSSNRTVVAGTHGY 259
+ L ++C VHRDI+ NIL+ S + DFG++R + D +V +
Sbjct: 128 Y-LESINC------VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKW 180
Query: 260 IAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDLLDQ--RVPSP 316
++PE T DV+ F V E+L G+ P L + + +I +L++ R+P P
Sbjct: 181 MSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD----VIGVLEKGDRLPKP 236
Query: 317 IDDQTVIQDIILVSKIVFACLRSKPTSRPMQRVSQEFLVRKTLYQLK 363
V+ ++ C P+ RP R ++ +YQ++
Sbjct: 237 DLCPPVLYTLMT------RCWDYDPSDRP--RFTELVCSLSDVYQME 275
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG- 154
+G+G YGSV A +G +VA+KKL + + E LL ++H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
F + Y+ + L N + +L ++ + L Y+H I
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADI 146
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT-MVLTEK 273
+HRD+ +N+ +N E + D G+AR H+D VA T Y APE+ M +
Sbjct: 147 IHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMTGYVA-TRWYRAPEIMLNWMHYNQT 203
Query: 274 CDVYSFGVVALEVLMGR 290
D++S G + E+L GR
Sbjct: 204 VDIWSVGCIMAELLTGR 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 116/260 (44%), Gaps = 30/260 (11%)
Query: 51 PKVRKAKPTETKKTRCGDEFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQL 110
P KA+P T + ++ +F ++++I IG G YG V A+
Sbjct: 20 PGPVKAEPAHTAASVAAKNLALLKAR---SFDVTFDVGDEYEIIETIGNGAYGVVSSARR 76
Query: 111 P-SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL---------YGFCLHKK 160
+G++VA+KK+ ++ + + E +L +H NI+ + YG K
Sbjct: 77 RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG---EFK 133
Query: 161 CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDIS 220
++++ M L I+ + + + L+ + + + L Y+H ++HRD+
Sbjct: 134 SVYVVLDLME-SDLHQII-HSSQPLTLEHVR--YFLYQLLRGLKYMHSA---QVIHRDLK 186
Query: 221 SNNILLNSKLEAFVADFGVARLLHSDSSNR----TVVAGTHGYIAPELAYTM-VLTEKCD 275
+N+L+N E + DFG+AR L + + T T Y APEL ++ T+ D
Sbjct: 187 PSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAID 246
Query: 276 VYSFGVVALEVLMGRH--PG 293
++S G + E+L R PG
Sbjct: 247 LWSVGCIFGEMLARRQLFPG 266
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 40/313 (12%)
Query: 51 PKVRKAKPTETKKTRCGDEFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQL 110
P KA+P T + ++ +F ++++I IG G YG V A+
Sbjct: 19 PGPVKAEPAHTAASVAAKNLALLKAR---SFDVTFDVGDEYEIIETIGNGAYGVVSSARR 75
Query: 111 P-SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKL---------YGFCLHKK 160
+G++VA+KK+ ++ + + E +L +H NI+ + YG K
Sbjct: 76 RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYG---EFK 132
Query: 161 CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDIS 220
++++ M L I+ + + + L+ + + + L Y+H ++HRD+
Sbjct: 133 SVYVVLDLME-SDLHQII-HSSQPLTLEHVR--YFLYQLLRGLKYMHS---AQVIHRDLK 185
Query: 221 SNNILLNSKLEAFVADFGVARLLHSDSSNR----TVVAGTHGYIAPELAYTM-VLTEKCD 275
+N+L+N E + DFG+AR L + + T T Y APEL ++ T+ D
Sbjct: 186 PSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAID 245
Query: 276 VYSFGVVALEVLMGRH--PGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIV 333
++S G + E+L R PG IM++ PSP VIQ + ++ V
Sbjct: 246 LWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMV----LGTPSP----AVIQAV--GAERV 295
Query: 334 FACLRSKPTSRPM 346
A ++S P +P+
Sbjct: 296 RAYIQSLPPRQPV 308
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 9/210 (4%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQL-PSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQ 143
+ ++F+ +G G +G V A++ +G A+K L + +E TE +LS
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 144 IR-HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
R H + +L+ +F + +++ G L ++ ++ R D + + A
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQ---KSRRFDEARARFYAAEIISA 136
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
L +LH I++RD+ +N+LL+ + +ADFG+ + + GT YIAP
Sbjct: 137 LMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAP 193
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E+ M+ D ++ GV+ E+L G P
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 104/227 (45%), Gaps = 25/227 (11%)
Query: 79 ITFQEMIVAT---EDFDIKYCIGTGGYGSVYR------AQLPSGKKVALKKLHHSETELA 129
+ FQ M T +D+ + +G G + V R Q + K + KKL + +
Sbjct: 18 LYFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-- 75
Query: 130 FLESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDW 189
+ EA + ++H NIV+L+ + +L++ + G LF + + D
Sbjct: 76 ---KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA 132
Query: 190 TKRVN-IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHS 245
+ ++ I++S+ H + IVHRD+ N+LL SK + +ADFG+A +
Sbjct: 133 SHCIHQILESVNHIHQH-------DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG 185
Query: 246 DSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ AGT GY++PE+ + D+++ GV+ +L+G P
Sbjct: 186 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHL 140
V +F+ +G G +G V + +G+ A+K L ++ E+A TE +
Sbjct: 148 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRV 204
Query: 141 LSQIRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS- 198
L RH + L Y F H + F++ +Y G LF L + R+ R +
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE----RVFSEDRARFYGAE 259
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258
+ AL YLH + ++V+RD+ N++L+ + DFG+ + D + GT
Sbjct: 260 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 317
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ D + GVV E++ GR P
Sbjct: 318 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHL 140
V +F+ +G G +G V + +G+ A+K L ++ E+A TE +
Sbjct: 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRV 201
Query: 141 LSQIRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS- 198
L RH + L Y F H + F++ +Y G LF L + R+ R +
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE----RVFSEDRARFYGAE 256
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258
+ AL YLH + ++V+RD+ N++L+ + DFG+ + D + GT
Sbjct: 257 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 314
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ D + GVV E++ GR P
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 127/275 (46%), Gaps = 30/275 (10%)
Query: 84 MIVATEDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
M V +D + +G G YG V + + +PSG+ +A+K++ A + S + + L+
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR------ATVNSQEQKRLLMD 55
Query: 143 -QIRHRNI-----VKLYGFCLHKKCMFLIYKYMRRG--SLFCILRNDDEAIRLDWTKRVN 194
I R + V YG + +++ + M + + + + I D ++
Sbjct: 56 LDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIA 115
Query: 195 IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+ S+ AL +LH S++HRD+ +N+L+N+ + + DFG++ L D + + + A
Sbjct: 116 V--SIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-KDIDA 170
Query: 255 GTHGYIAPELAYTMV----LTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLD 310
G Y+APE + + K D++S G+ +E+ + R P D S P L +++
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYD--SWGTPFQQLKQVVE 228
Query: 311 QRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ P D+ + + S+ CL+ RP
Sbjct: 229 EPSPQLPADKFSAEFVDFTSQ----CLKKNSKERP 259
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHL 140
V +F+ +G G +G V + +G+ A+K L ++ E+A TE +
Sbjct: 7 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRV 63
Query: 141 LSQIRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS- 198
L RH + L Y F H + F++ +Y G LF L + R+ R +
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE----RVFSEDRARFYGAE 118
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258
+ AL YLH + ++V+RD+ N++L+ + DFG+ + D + GT
Sbjct: 119 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 176
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ D + GVV E++ GR P
Sbjct: 177 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHL 140
V +F+ +G G +G V + +G+ A+K L ++ E+A TE +
Sbjct: 5 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRV 61
Query: 141 LSQIRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS- 198
L RH + L Y F H + F++ +Y G LF L + R+ R +
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE----RVFSEDRARFYGAE 116
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258
+ AL YLH + ++V+RD+ N++L+ + DFG+ + D + GT
Sbjct: 117 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 174
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ D + GVV E++ GR P
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 89 EDFDIKY-CIGTGGYGSVYRAQLPSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIR 145
ED+ + + +G GG+G V+ Q+ + K+ K + + E +L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSL-FCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
R IV L K + L+ M G + + I D++ + + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
+LH +I++RD+ N+LL+ ++D G+A L + + AGT G++APEL
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
D ++ GV E++ R P
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 111/225 (49%), Gaps = 25/225 (11%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G +G VY+A+L SG+ VA+KK+ + AF E ++ ++ H NIV+L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK---AFKNR---ELQIMRKLDHCNIVRLRYF 81
Query: 156 CL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI-VKSMAHALSYLHC 208
KK + L+ Y+ +++ + R+ A + V + + + +L+Y+H
Sbjct: 82 FYSSGEKKDEVYLNLVLDYV-PATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 209 DCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I HRDI N+LL+ + DFG A+ L N + + + Y APEL +
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIFG 196
Query: 268 MV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 239
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 89 EDFDIKY-CIGTGGYGSVYRAQLPSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIR 145
ED+ + + +G GG+G V+ Q+ + K+ K + + E +L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSL-FCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
R IV L K + L+ M G + + I D++ + + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
+LH +I++RD+ N+LL+ ++D G+A L + + AGT G++APEL
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
D ++ GV E++ R P
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 89 EDFDIKY-CIGTGGYGSVYRAQLPSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIR 145
ED+ + + +G GG+G V+ Q+ + K+ K + + E +L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSL-FCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
R IV L K + L+ M G + + I D++ + + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
+LH +I++RD+ N+LL+ ++D G+A L + + AGT G++APEL
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
D ++ GV E++ R P
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G +G VY+A+L SG+ VA+KK+ + AF E ++ ++ H NIV+L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK---AFKNR---ELQIMRKLDHCNIVRLRYF 81
Query: 156 CL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALSY 205
KK + L+ Y+ + R R T V VK + +L+Y
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
+H I HRDI N+LL+ + DFG A+ L N + + + Y APEL
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPEL 193
Query: 265 AYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
+ T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 239
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 89 EDFDIKY-CIGTGGYGSVYRAQLPSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIR 145
ED+ + + +G GG+G V+ Q+ + K+ K + + E +L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH 243
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSL-FCILRNDDEAIRLDWTKRVNIVKSMAHALS 204
R IV L K + L+ M G + + I D++ + + + L
Sbjct: 244 SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLE 303
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
+LH +I++RD+ N+LL+ ++D G+A L + + AGT G++APEL
Sbjct: 304 HLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
D ++ GV E++ R P
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH----SETELAFLESFQTEAHL 140
V +F+ +G G +G V + +G+ A+K L ++ E+A TE +
Sbjct: 6 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT---LTENRV 62
Query: 141 LSQIRHRNIVKL-YGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKS- 198
L RH + L Y F H + F++ +Y G LF L + R+ R +
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVM-EYANGGELFFHLSRE----RVFSEDRARFYGAE 117
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHG 258
+ AL YLH + ++V+RD+ N++L+ + DFG+ + D + GT
Sbjct: 118 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 175
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ D + GVV E++ GR P
Sbjct: 176 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 119/282 (42%), Gaps = 58/282 (20%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHS---ETELAFLESFQTEAHLLSQIRH 146
+ +K IG G YG V A + + A+K ++ + + +E +TE L+ ++ H
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHH 87
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLF-------------CIL-----------RNDD 182
NI +LY ++ + L+ + G L C + ++
Sbjct: 88 PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 183 EAIR---------LDWTKR----VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILL--N 227
EAI LD+ +R NI++ + AL YLH I HRDI N L N
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTN 204
Query: 228 SKLEAFVADFGVAR----LLHSDSSNRTVVAGTHGYIAPELAYTM--VLTEKCDVYSFGV 281
E + DFG+++ L + + T AGT ++APE+ T KCD +S GV
Sbjct: 205 KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGV 264
Query: 282 VALEVLMGRHP------GDLLSSVNPKIMLIDLLDQRVPSPI 317
+ +LMG P D +S V K + + + V SP+
Sbjct: 265 LLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPL 306
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI-RHRNI 149
+G G +G V A + + VA+K L S L E+ +E +LS + H NI
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNI 105
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK---------------RVN 194
V L G C +I +Y G L LR ++ T ++
Sbjct: 106 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 165
Query: 195 IVKSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A +++L +CI HRD+++ NILL + DFG+AR + +DS+ VV
Sbjct: 166 FSYQVAKGMAFLASKNCI----HRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVV 219
Query: 254 AGTH----GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+S+G+ E+ +G P
Sbjct: 220 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 31/228 (13%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G +G VY+A+L SG+ VA+KK+ + AF E ++ ++ H NIV+L F
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGK---AFKNR---ELQIMRKLDHCNIVRLRYF 81
Query: 156 CL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALSY 205
KK + L+ Y+ + R R T V VK + +L+Y
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPEL 264
+H I HRDI N+LL+ + DFG A+ L N + + + Y APEL
Sbjct: 138 IHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPEL 193
Query: 265 AYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
+ T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 239
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKL-- 152
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 80
Query: 153 --YGFCLHKKCMF--LIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
Y K ++ L+ Y+ + R R T V VK + +L+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 192
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 11/199 (5%)
Query: 97 IGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G G +G V++ + +G K+A K + + E + E +++Q+ H N+++LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKII--KTRGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
K + L+ +Y+ G LF R DE+ L + +K + + ++H I+
Sbjct: 155 FESKNDIVLVMEYVDGGELFD--RIIDESYNLTELDTILFMKQICEGIRHMHQ---MYIL 209
Query: 216 HRDISSNNIL-LNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
H D+ NIL +N + + DFG+AR + V GT ++APE+ ++
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLAR-RYKPREKLKVNFGTPEFLAPEVVNYDFVSFP 268
Query: 274 CDVYSFGVVALEVLMGRHP 292
D++S GV+A +L G P
Sbjct: 269 TDMWSVGVIAYMLLSGLSP 287
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI-RHRNI 149
+G G +G V A + + VA+K L S L E+ +E +LS + H NI
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNI 107
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK---------------RVN 194
V L G C +I +Y G L LR ++ T ++
Sbjct: 108 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 167
Query: 195 IVKSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A +++L +CI HRD+++ NILL + DFG+AR + +DS+ VV
Sbjct: 168 FSYQVAKGMAFLASKNCI----HRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVV 221
Query: 254 AGTH----GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+S+G+ E+ +G P
Sbjct: 222 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 42/277 (15%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI-RHRNI 149
+G G +G V A + + VA+K L S L E+ +E +LS + H NI
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNI 112
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK---------------RVN 194
V L G C +I +Y G L LR ++ T ++
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 195 IVKSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A +++L +CI HRD+++ NILL + DFG+AR + +DS+ VV
Sbjct: 173 FSYQVAKGMAFLASKNCI----HRDLAARNILLTHGRITKICDFGLARHIKNDSN--YVV 226
Query: 254 AGTH----GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHPGDLLSSVNPKIMLIDL 308
G ++APE + V T + DV+S+G+ E+ +G P + V+ K +
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM-PVDSKFYKMIK 285
Query: 309 LDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+ SP + DI+ C + P RP
Sbjct: 286 EGFRMLSPEHAPAEMYDIMKT------CWDADPLKRP 316
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI-RHRNI 149
+G G +G V A + + VA+K L S L E+ +E +LS + H NI
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNI 112
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK---------------RVN 194
V L G C +I +Y G L LR ++ T ++
Sbjct: 113 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 172
Query: 195 IVKSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A +++L +CI HRD+++ NILL + DFG+AR + +DS+ VV
Sbjct: 173 FSYQVAKGMAFLASKNCI----HRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVV 226
Query: 254 AGTH----GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+S+G+ E+ +G P
Sbjct: 227 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQ--LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI 144
A + ++ IG G YG V++A+ G+ VALK++ E S E +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 145 R---HRNIVKLYGFCLHKKC-----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
H N+V+L+ C + + L+++++ + + + + + + K +++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK--DMM 126
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ L +LH +VHRD+ NIL+ S + +ADFG+AR ++S T V T
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTSVVVT 182
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
Y APE+ D++S G + E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQ--LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI 144
A + ++ IG G YG V++A+ G+ VALK++ E S E +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 145 R---HRNIVKLYGFCLHKKC-----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
H N+V+L+ C + + L+++++ + + + + + + K +++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK--DMM 126
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ L +LH +VHRD+ NIL+ S + +ADFG+AR ++S T V T
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTSVVVT 182
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
Y APE+ D++S G + E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 87 ATEDFDIKYCIGTGGYGSVYRAQ--LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI 144
A + ++ IG G YG V++A+ G+ VALK++ E S E +L +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 145 R---HRNIVKLYGFCLHKKC-----MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
H N+V+L+ C + + L+++++ + + + + + + K +++
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK--DMM 126
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+ L +LH +VHRD+ NIL+ S + +ADFG+AR ++S T V T
Sbjct: 127 FQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTSVVVT 182
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
Y APE+ D++S G + E+
Sbjct: 183 LWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 101/230 (43%), Gaps = 21/230 (9%)
Query: 77 GRITFQEMIVATEDF-DIKYCIGTGGYGSVYRAQ-----LPSGKKVALKKLHHSETELAF 130
G TF++ V EDF DI +G+G + V + + L K K+ +
Sbjct: 1 GMETFKQQKV--EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVC 58
Query: 131 LESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT 190
E + E +L Q+ H NI+ L+ ++ + LI + + G LF L + L
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEE 115
Query: 191 KRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAF----VADFGVARLLHSD 246
+ + +K + ++YLH I H D+ NI+L K + DFG+A + D
Sbjct: 116 EATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-D 171
Query: 247 SSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GD 294
+ GT ++APE+ L + D++S GV+ +L G P GD
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 32/229 (13%)
Query: 96 CIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G V++A+L +VA+KK+ + F+ E ++ ++H N+V L
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQD-------KRFKNRELQIMRIVKHPNVVDLKA 99
Query: 155 FCL----HKKCMF--LIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F K +F L+ +Y+ + R +L T + ++K + +L+
Sbjct: 100 FFYSNGDKKDEVFLNLVLEYVPE----TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLA 155
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A++L + N + + + Y APE
Sbjct: 156 YIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-YRAPE 211
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T D++S G V E++ G+ PG+ S ++ + +I +L
Sbjct: 212 LIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGE--SGIDQLVEIIKVL 258
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI-RHRNI 149
+G G +G V A + + VA+K L S L E+ +E +LS + H NI
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNI 89
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK---------------RVN 194
V L G C +I +Y G L LR ++ T ++
Sbjct: 90 VNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLS 149
Query: 195 IVKSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV 253
+A +++L +CI HRD+++ NILL + DFG+AR + +DS+ VV
Sbjct: 150 FSYQVAKGMAFLASKNCI----HRDLAARNILLTHGRITKICDFGLARDIKNDSN--YVV 203
Query: 254 AGTH----GYIAPELAYTMVLTEKCDVYSFGVVALEVL-MGRHP 292
G ++APE + V T + DV+S+G+ E+ +G P
Sbjct: 204 KGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG+V++A+ + + VALK++ + + S E LL +++H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 156 CLHKKCMFLIYKY----MRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
K + L++++ +++ C D E ++ + + + L + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-------SFLFQLLKGLGFCHSR-- 120
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVL- 270
+++HRD+ N+L+N E +ADFG+AR + T Y P++ + L
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 271 TEKCDVYSFGVVALEVLMGRHP 292
+ D++S G + E+ P
Sbjct: 180 STSIDMWSAGCIFAELANAARP 201
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 97 IGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN---IVKL 152
IG G YGSV + PSG+ +A+K++ + E E Q L +R + IV+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK---EQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 153 YGFCLHKK----CMFLI-------YKYMRRGSLFCILRNDDEAIRLDWTKRVNI--VKSM 199
YG + CM L+ YKY ++ +L D+ I + ++ + VK++
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKY-----VYSVL---DDVIPEEILGKITLATVKAL 138
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259
H L I+HRDI +NILL+ + DFG++ L DS +T AG Y
Sbjct: 139 NHLKENLK------IIHRDIKPSNILLDRSGNIKLCDFGISGQL-VDSIAKTRDAGCRPY 191
Query: 260 IAPEL----AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSV 299
+APE A + DV+S G+ E+ GR P +SV
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV 235
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 80
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 192
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 239
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 81
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 138 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 193
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 240
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 80
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 192
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 239
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 27/226 (11%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 99
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI-VKSMAHALSYLH 207
F KK + L+ Y+ +++ + R+ A + V + + + +L+Y+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 158
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
I HRDI N+LL+ + DFG A+ L N + + + Y APEL +
Sbjct: 159 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 214
Query: 267 TMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 215 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 258
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 40/254 (15%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR-HRNIVKLYG 154
+G G YG V+++ +G+ VA+KK+ + + E +L+++ H NIV L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 155 F--CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
+ + ++L++ YM L ++R A L+ + +V + + YLH
Sbjct: 77 VLRADNDRDVYLVFDYME-TDLHAVIR----ANILEPVHKQYVVYQLIKVIKYLHSG--- 128
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVAR--------------LLHSDSSN-------RT 251
++HRD+ +NILLN++ VADFG++R ++ ++ N T
Sbjct: 129 GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILT 188
Query: 252 VVAGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDL 308
T Y APE L + T+ D++S G + E+L G+ PG S++N +I +
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS--STMNQLERIIGV 246
Query: 309 LDQRVPSPIDDQTV 322
+D PS D +++
Sbjct: 247 ID--FPSNEDVESI 258
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 27/226 (11%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 84
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI-VKSMAHALSYLH 207
F KK + L+ Y+ +++ + R+ A + V + + + +L+Y+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
I HRDI N+LL+ + DFG A+ L N + + + Y APEL +
Sbjct: 144 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPELIF 199
Query: 267 TMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 200 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 243
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 88
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 145 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 200
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 247
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 100/219 (45%), Gaps = 22/219 (10%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLH-------HSETELAFLESFQTEAHL 140
E+++ K +G G V R P+ K+ A+K + +E E+ E +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 141 LSQIR-HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
L ++ H NI++L FL++ M++G LF L E + L + I++++
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRKIMRAL 133
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259
+ LH +IVHRD+ NILL+ + + DFG + L R+ V GT Y
Sbjct: 134 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS-VCGTPSY 189
Query: 260 IAPELAYTMV------LTEKCDVYSFGVVALEVLMGRHP 292
+APE+ + ++ D++S GV+ +L G P
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 92
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 204
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 251
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 114
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 226
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 273
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 92
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 149 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-YRAPE 204
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 251
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 22/219 (10%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLH-------HSETELAFLESFQTEAHL 140
E+++ K +G G V R P+ K+ A+K + +E E+ E +
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 141 LSQIR-HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
L ++ H NI++L FL++ M++G LF L E + L + I++++
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRKIMRAL 120
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259
+ LH +IVHRD+ NILL+ + + DFG + L R V GT Y
Sbjct: 121 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGTPSY 176
Query: 260 IAPELAYTMV------LTEKCDVYSFGVVALEVLMGRHP 292
+APE+ + ++ D++S GV+ +L G P
Sbjct: 177 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQT 136
E V+ E + +G G +G VY + +VA+K ++ S + +E F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLN 69
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ ++V+L G + ++ + M G L LR N+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+ + + +A ++YL+ VHRD+++ N ++ + DFG+ R ++ +
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYY 186
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G ++APE V T D++SFGVV E+
Sbjct: 187 RK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 108
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 165 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 220
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 267
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 80
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 192
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 239
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 27/226 (11%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 93
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI-VKSMAHALSYLH 207
F KK + L+ Y+ +++ + R+ A + V + + + +L+Y+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 152
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
I HRDI N+LL+ + DFG A+ L N + + + Y APEL +
Sbjct: 153 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPELIF 208
Query: 267 TMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 209 GATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 252
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 100/203 (49%), Gaps = 18/203 (8%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G G Y +VY+ +G VALK++ ++E + E L+ +++H NIV+LY
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVK-LDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKR---VNIVK----SMAHALSYLHC 208
+ + L++++M L+ ++ + T R +N+VK + L++ H
Sbjct: 72 IHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE 126
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAYT 267
+ I+HRD+ N+L+N + + + DFG+AR + + T Y AP+ L +
Sbjct: 127 N---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS 183
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
+ D++S G + E++ G+
Sbjct: 184 RTYSTSIDIWSCGCILAEMITGK 206
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 114
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 226
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 273
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQT 136
E V+ E + +G G +G VY + +VA+K ++ S + +E F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLN 69
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ ++V+L G + ++ + M G L LR N+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+ + + +A ++YL+ VHRD+++ N ++ + DFG+ R +
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G ++APE V T D++SFGVV E+
Sbjct: 187 RK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 116
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 173 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 228
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 275
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQT 136
E V+ E + +G G +G VY + +VA+K ++ S + +E F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLN 69
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ ++V+L G + ++ + M G L LR N+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+ + + +A ++YL+ VHRD+++ N ++ + DFG+ R +
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 186
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G ++APE V T D++SFGVV E+
Sbjct: 187 RK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 118
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 175 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 230
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 277
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQT 136
E V+ E + +G G +G VY + +VA+K ++ S + +E F
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLN 66
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ ++V+L G + ++ + M G L LR N+
Sbjct: 67 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 126
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+ + + +A ++YL+ VHRD+++ N ++ + DFG+ R +
Sbjct: 127 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXX 183
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G ++APE V T D++SFGVV E+
Sbjct: 184 RK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 17/214 (7%)
Query: 89 EDF-DIKYCIGTGGYGSVYRAQ-----LPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
EDF DI +G+G + V + + L K K+ + E + E +L
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q+ H N++ L+ ++ + LI + + G LF L + L + + +K +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE---SLSEEEATSFIKQILDG 127
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAF----VADFGVARLLHSDSSNRTVVAGTHG 258
++YLH I H D+ NI+L K + DFG+A + D + GT
Sbjct: 128 VNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIFGTPE 183
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
++APE+ L + D++S GV+ +L G P
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 85
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 142 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 197
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 244
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 99/219 (45%), Gaps = 22/219 (10%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLH-------HSETELAFLESFQTEAHL 140
E+++ K +G G V R P+ K+ A+K + +E E+ E +
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 141 LSQIR-HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSM 199
L ++ H NI++L FL++ M++G LF L E + L + I++++
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLT---EKVTLSEKETRKIMRAL 133
Query: 200 AHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGY 259
+ LH +IVHRD+ NILL+ + + DFG + L R V GT Y
Sbjct: 134 LEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE-VCGTPSY 189
Query: 260 IAPELAYTMV------LTEKCDVYSFGVVALEVLMGRHP 292
+APE+ + ++ D++S GV+ +L G P
Sbjct: 190 LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQT 136
E V+ E + +G G +G VY + +VA+K ++ S + +E F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLN 69
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ ++V+L G + ++ + M G L LR N+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+ + + +A ++YL+ VHRD+++ N ++ + DFG+ R ++
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G ++APE V T D++SFGVV E+
Sbjct: 187 RK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 89 EDF-DIKYCIGTGGYGSVYRAQ-----LPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
EDF DI +G+G + V + + L K K+ + E + E +L
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q+ H N++ L+ ++ + LI + + G LF L + L + + +K +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDG 127
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAF----VADFGVARLLHSDSSNRTVVAGTHG 258
++YLH I H D+ NI+L K + DFG+A + D + GT
Sbjct: 128 VNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIFGTPE 183
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GD 294
++APE+ L + D++S GV+ +L G P GD
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQT-EAHLLSQIRHRNIVKLYG 154
IG G +G VY+A+L SG+ VA+KK+ + F+ E ++ ++ H NIV+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQD-------KRFKNRELQIMRKLDHCNIVRLRY 159
Query: 155 FCL---HKK---CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK----SMAHALS 204
F KK + L+ Y+ + R R T V VK + +L+
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPE----TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 205 YLHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
Y+H I HRDI N+LL+ + DFG A+ L N + + + Y APE
Sbjct: 216 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-YRAPE 271
Query: 264 LAYTMV-LTEKCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLIDLL 309
L + T DV+S G V E+L+G+ PGD S V+ + +I +L
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD--SGVDQLVEIIKVL 318
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 44/223 (19%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHL--LSQIRHRNIVKLYG 154
IG G YG+VY+ L + VA+K A ++F E ++ + + H NI +
Sbjct: 21 IGRGRYGAVYKGSLDE-RPVAVKVF-----SFANRQNFINEKNIYRVPLMEHDNIAR--- 71
Query: 155 FCLHKKCM--------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
F + + + L+ +Y GSL L DW + S+ L+YL
Sbjct: 72 FIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYL 127
Query: 207 HCDC------IPSIVHRDISSNNILLNSKLEAFVADFGVA------RLLHSDSSNRTVVA 254
H + P+I HRD++S N+L+ + ++DFG++ RL+ + ++
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 255 --GTHGYIAPELAYTMV-------LTEKCDVYSFGVVALEVLM 288
GT Y+APE+ V ++ D+Y+ G++ E+ M
Sbjct: 188 EVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH------SETELAFLESFQTEAHLL 141
+++ + +G+G G V A + + KKVA+K + S E + +TE +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 142 SQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
++ H I+K+ F + +++ + M G LF + + RL M
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLL 125
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHG 258
A+ YLH + I+HRD+ N+LL+S+ E + DFG +++L S RT + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 181
Query: 259 YIAPEL---AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ T D +S GV+ L G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH------SETELAFLESFQTEAHLL 141
+++ + +G+G G V A + + KKVA+K + S E + +TE +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 142 SQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
++ H I+K+ F + +++ + M G LF + + RL M
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLL 125
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHG 258
A+ YLH + I+HRD+ N+LL+S+ E + DFG +++L S RT + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 181
Query: 259 YIAPEL---AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ T D +S GV+ L G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 113/271 (41%), Gaps = 35/271 (12%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKK-LHHSETELAFLESFQTEAHLLSQIRHRNIVKLYG 154
+G GG+ V + L G ALK+ L H + + E Q EA + H NI++L
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR---EEAQREADMHRLFNHPNILRLVA 93
Query: 155 FCLHKKC----MFLIYKYMRRGSLFC-ILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
+CL ++ +L+ + +RG+L+ I R D+ L + + ++ + L +H
Sbjct: 94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVAR--LLHSDSSNRTVVAG-------THGYI 260
HRD+ NILL + + + D G +H + S + + T Y
Sbjct: 154 ---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 261 APELAYTM---VLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPI 317
APEL V+ E+ DV+S G V ++ G P D++ + L +
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL----------AV 260
Query: 318 DDQTVIQDIILVSKIVFACLRSKPTSRPMQR 348
+Q I S ++ L S T P QR
Sbjct: 261 QNQLSIPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAH 139
FQ M+ + + + +K IG G Y R + + A+K + S+ + + E +
Sbjct: 20 FQSMVFS-DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS--EEIEI--- 73
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLF-CILRNDDEAIRLDWTKRVNIVKS 198
LL +H NI+ L K ++L+ + MR G L ILR + R + ++ +
Sbjct: 74 LLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER----EASFVLHT 129
Query: 199 MAHALSYLHCDCIPSIVHRDISSNNILL---NSKLEAF-VADFGVARLLHSDSSNRTVVA 254
+ + YLH +VHRD+ +NIL + E + DFG A+ L +++
Sbjct: 130 IGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 255 GTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
T ++APE+ E CD++S G++ +L G P
Sbjct: 187 YTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 89 EDF-DIKYCIGTGGYGSVYRAQ-----LPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
EDF DI +G+G + V + + L K K+ + E + E +L
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q+ H N++ L+ ++ + LI + + G LF L + L + + +K +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDG 127
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAF----VADFGVARLLHSDSSNRTVVAGTHG 258
++YLH I H D+ NI+L K + DFG+A + D + GT
Sbjct: 128 VNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIFGTPE 183
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GD 294
++APE+ L + D++S GV+ +L G P GD
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH------SETELAFLESFQTEAHLL 141
+++ + +G+G G V A + + KKVA+K + S E + +TE +L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 142 SQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
++ H I+K+ F + +++ + M G LF + + RL M
Sbjct: 76 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLL 131
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHG 258
A+ YLH + I+HRD+ N+LL+S+ E + DFG +++L S RT + GT
Sbjct: 132 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 187
Query: 259 YIAPEL---AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ T D +S GV+ L G P
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 224
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH------SETELAFLESFQTEAHLL 141
+++ + +G+G G V A + + KKVA+K + S E + +TE +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 142 SQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
++ H I+K+ F + +++ + M G LF + + RL M
Sbjct: 70 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLL 125
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHG 258
A+ YLH + I+HRD+ N+LL+S+ E + DFG +++L S RT + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 181
Query: 259 YIAPEL---AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ T D +S GV+ L G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH------SETELAFLESFQTEAHLL 141
+++ + +G+G G V A + + KKVA+K + S E + +TE +L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 142 SQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
++ H I+K+ F + +++ + M G LF + + RL M
Sbjct: 69 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLL 124
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHG 258
A+ YLH + I+HRD+ N+LL+S+ E + DFG +++L S RT + GT
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 180
Query: 259 YIAPEL---AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ T D +S GV+ L G P
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 89 EDF-DIKYCIGTGGYGSVYRAQ-----LPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
EDF DI +G+G + V + + L K K+ + E + E +L
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q+ H N++ L+ ++ + LI + + G LF L + L + + +K +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDG 127
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAF----VADFGVARLLHSDSSNRTVVAGTHG 258
++YLH I H D+ NI+L K + DFG+A + D + GT
Sbjct: 128 VNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIFGTPE 183
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GD 294
++APE+ L + D++S GV+ +L G P GD
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 31/269 (11%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK---SMAHALSY 205
V L G C + +I ++ + G+L LR+ R ++ ++ K ++ H + Y
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK----RNEFVPYKDLYKDFLTLEHLIXY 149
Query: 206 -------LHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVVAGT 256
+ +HRD+++ NILL+ K + DFG+AR ++ D +
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++APE + V T + DV+SFGV+ E+ L +S P + + + +R+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFXRRLKEG 263
Query: 317 IDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ + + + C +P+ RP
Sbjct: 264 TRMRAPDYTTPEMYQTMLDCWHGEPSQRP 292
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 19/218 (8%)
Query: 89 EDF-DIKYCIGTGGYGSVYRAQ-----LPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
EDF DI +G+G + V + + L K K+ + E + E +L
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 143 QIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
Q+ H N++ L+ ++ + LI + + G LF L + L + + +K +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDG 127
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAF----VADFGVARLLHSDSSNRTVVAGTHG 258
++YLH I H D+ NI+L K + DFG+A + D + GT
Sbjct: 128 VNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNIFGTPE 183
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GD 294
++APE+ L + D++S GV+ +L G P GD
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 221
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 93/219 (42%), Gaps = 25/219 (11%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQTEAH 139
V+ E + +G G +G VY + +VA+K ++ S + +E F EA
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLNEAS 71
Query: 140 LLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDWTKR 192
++ ++V+L G + ++ + M G L LR N+ +
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
+ + +A ++YL+ VHRD+++ N ++ + DFG+ R ++ R
Sbjct: 132 IQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRK- 187
Query: 253 VAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
G G ++APE V T D++SFGVV E+
Sbjct: 188 --GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 12/218 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
E + I +G G +G V+R S KK + K + L + E +L+ RHRN
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL--VKKEISILNIARHRN 62
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHC 208
I+ L+ + + +I++++ +F R + A L+ + V+ V + AL +LH
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDIFE--RINTSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 209 DCIPSIVHRDISSNNILLNSKLEAFVA--DFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
I H DI NI+ ++ + + +FG AR L + R + Y APE+
Sbjct: 121 HNIG---HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPE-YYAPEVHQ 176
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIM 304
V++ D++S G + +L G +P L+ N +I+
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINP--FLAETNQQII 212
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 51/286 (17%)
Query: 87 ATEDFDIK-------YCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEA 138
A E+F++K +G G YG V + + +PSG+ A+K++ A
Sbjct: 25 AXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIR---------------A 69
Query: 139 HLLSQIRHRNIVKLYGFCLHKKCMFLIYKY---MRRGSLFCILRNDDEAIRLDWTKRVN- 194
+ SQ + R + L C F + Y R G ++ D ++ + + ++
Sbjct: 70 TVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDK 129
Query: 195 -----------IVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243
I S+ AL +LH S++HRD+ +N+L+N+ + DFG++ L
Sbjct: 130 GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYL 187
Query: 244 HSDSSNRTVVAGTHGYIAPELAYTMV----LTEKCDVYSFGVVALEVLMGRHPGDLLSSV 299
D + + + AG Y APE + + K D++S G+ +E+ + R P D S
Sbjct: 188 VDDVA-KDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD--SWG 244
Query: 300 NPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
P L ++++ P D+ + + S+ CL+ RP
Sbjct: 245 TPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQ----CLKKNSKERP 286
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG+V++A+ + + VALK++ + + S E LL +++H+NIV+L+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 156 CLHKKCMFLIYKY----MRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
K + L++++ +++ C D E ++ + + + L + H
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-------SFLFQLLKGLGFCHSR-- 120
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVL- 270
+++HRD+ N+L+N E +A+FG+AR + T Y P++ + L
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLY 179
Query: 271 TEKCDVYSFGVVALEVLMGRHP 292
+ D++S G + E+ P
Sbjct: 180 STSIDMWSAGCIFAELANAGRP 201
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 91 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 143
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 202
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 203 SCDMWSLGVIMYILLCGYPP 222
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 18/214 (8%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYR-AQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQ 143
+V ++ + +K IG G Y R + + A+K + S+ + S + E LL
Sbjct: 23 LVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD----PSEEIEI-LLRY 77
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLF-CILRNDDEAIRLDWTKRVNIVKSMAHA 202
+H NI+ L K ++L+ + MR G L ILR + R + ++ ++
Sbjct: 78 GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSER----EASFVLHTIGKT 133
Query: 203 LSYLHCDCIPSIVHRDISSNNILL---NSKLEAF-VADFGVARLLHSDSSNRTVVAGTHG 258
+ YLH +VHRD+ +NIL + E + DFG A+ L +++ T
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN 190
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
++APE+ E CD++S G++ +L G P
Sbjct: 191 FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 92 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 144
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 203
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 204 SCDMWSLGVIMYILLCGYPP 223
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 93 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 145
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 204
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 205 SCDMWSLGVIMYILLCGYPP 224
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 101 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 153
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 154 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 212
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 213 SCDMWSLGVIMYILLCGYPP 232
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G +G V++A+ +G+KVALKK+ + F + E +L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 156 CLHK-----KC---MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
C K +C ++L++ + L +L N L KRV ++ + + L Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH 142
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241
+ I+HRD+ + N+L+ +ADFG+AR
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 131 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 183
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 242
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 243 SCDMWSLGVIMYILLCGYPP 262
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G +G V++A+ +G+KVALKK+ + F + E +L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 156 CLHK-----KC---MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
C K +C ++L++ + L +L N L KRV ++ + + L Y+H
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH 142
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241
+ I+HRD+ + N+L+ +ADFG+AR
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G +G V++A+ +G+KVALKK+ + F + E +L ++H N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 156 CLHK-----KC---MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
C K +C ++L++ + L +L N L KRV ++ + + L Y+H
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH 142
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241
+ I+HRD+ + N+L+ +ADFG+AR
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 137 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 189
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 248
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 249 SCDMWSLGVIMYILLCGYPP 268
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 139
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 198
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 199 SCDMWSLGVIMYILLCGYPP 218
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 87 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 139
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 198
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 199 SCDMWSLGVIMYILLCGYPP 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 137
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 196
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 197 SCDMWSLGVIMYILLCGYPP 216
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 86 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 138
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 197
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 198 SCDMWSLGVIMYILLCGYPP 217
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQT 136
E V+ E + +G G +G VY + +VA+K ++ S + +E F
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLN 70
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ ++V+L G + ++ + M G L LR N+
Sbjct: 71 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 130
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+ + + +A ++YL+ VHR++++ N ++ + DFG+ R ++
Sbjct: 131 QEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 187
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G ++APE V T D++SFGVV E+
Sbjct: 188 RK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 116/269 (43%), Gaps = 31/269 (11%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK---SMAHALSY 205
V L G C + +I ++ + G+L LR+ R ++ ++ K ++ H + Y
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK----RNEFVPYKDLYKDFLTLEHLICY 149
Query: 206 -------LHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVVAGT 256
+ +HRD+++ NILL+ K + DFG+AR ++ D +
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSP 316
++APE + V T + DV+SFGV+ E+ L +S P + + + +R+
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRLKEG 263
Query: 317 IDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ + + + C +P+ RP
Sbjct: 264 TRMRAPDYTTPEMYQTMLDCWHGEPSQRP 292
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G +G V++A+ +G+KVALKK+ + F + E +L ++H N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 156 CLHK-----KC---MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
C K +C ++L++ + L +L N L KRV ++ + + L Y+H
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRV--MQMLLNGLYYIH 141
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVAR 241
+ I+HRD+ + N+L+ +ADFG+AR
Sbjct: 142 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH------SETELAFLESFQTEAHLL 141
+++ + +G+G G V A + + KKVA++ + S E + +TE +L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 142 SQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
++ H I+K+ F + +++ + M G LF + + RL M
Sbjct: 195 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLL 250
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHG 258
A+ YLH + I+HRD+ N+LL+S+ E + DFG +++L S RT + GT
Sbjct: 251 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 306
Query: 259 YIAPEL---AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ T D +S GV+ L G P
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 343
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 18/215 (8%)
Query: 91 FDIKYCIGTGGYGSVYRAQ-----LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+D +G+G + V + + L K K+ S E + E +L +I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
H N++ L+ +K + LI + + G LF L + + T+ +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE---FLKQILNGVYY 129
Query: 206 LHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
LH I H D+ NI+L K + DFG+A + + + + GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPAFVA 185
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GD 294
PE+ L + D++S GV+ +L G P GD
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
IGTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +YM G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + VADFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 83 EMIVATEDFDIKYCIGTGGYGSVYRAQL------PSGKKVALKKLHHSETELAFLESFQT 136
E V+ E + +G G +G VY + +VA+K ++ S + +E F
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE-FLN 69
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-------NDDEAIRLDW 189
EA ++ ++V+L G + ++ + M G L LR N+
Sbjct: 70 EASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTL 129
Query: 190 TKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN 249
+ + + +A ++YL+ VHR++++ N ++ + DFG+ R ++
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYY 186
Query: 250 RTVVAGTHG-----YIAPELAYTMVLTEKCDVYSFGVVALEV 286
R G G ++APE V T D++SFGVV E+
Sbjct: 187 RK---GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLL-SQIRHRNIVKLYG 154
+G G +G V+R + +G + A+KK+ LE F+ E + + + IV LYG
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGLTSPRIVPLYG 152
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
+ + + + GSL +++ E L + + + L YLH I
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRALYYLGQALEGLEYLHSR---RI 206
Query: 215 VHRDISSNNILLNSK-LEAFVADFGVARLLHSDSSNRTV-----VAGTHGYIAPELAYTM 268
+H D+ ++N+LL+S A + DFG A L D +++ + GT ++APE+
Sbjct: 207 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGR 266
Query: 269 VLTEKCDVYSFGVVALEVLMGRHP 292
K DV+S + L +L G HP
Sbjct: 267 SCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
IGTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +YM G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYMPGGDMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + VADFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHH------SETELAFLESFQTEAHLL 141
+++ + +G+G G V A + + KKVA++ + S E + +TE +L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 142 SQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAH 201
++ H I+K+ F + +++ + M G LF + + RL M
Sbjct: 209 KKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNK---RLKEATCKLYFYQMLL 264
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHG 258
A+ YLH + I+HRD+ N+LL+S+ E + DFG +++L S RT + GT
Sbjct: 265 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT-LCGTPT 320
Query: 259 YIAPEL---AYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ T D +S GV+ L G P
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 357
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I KS+ A+ YLH +I
Sbjct: 131 RKCLLIVXECLDGGELFSRIQDRGDQA----FTEREASEIXKSIGEAIQYLHSI---NIA 183
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTTPCYTPYYVAPEVLGPEKYDK 242
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD +S GV+ +L G P
Sbjct: 243 SCDXWSLGVIXYILLCGYPP 262
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 118 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 172 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 117
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 118 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 171
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 172 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ-----MELDHERMSYLLYQMLXGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 200 MGYKENVDIWSVGCIMGE--MVRH 221
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 95/210 (45%), Gaps = 11/210 (5%)
Query: 91 FDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLH---HSETELAFLESFQTEAHLLSQIRH 146
+++ IG G + V R +G++ A+K + + + E + EA + ++H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSL-FCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
+IV+L +++++++M L F I++ D + ++ + AL Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDSSNRTVVAGTHGYIAP 262
H + +I+HRD+ N+LL SK + + DFGVA L GT ++AP
Sbjct: 146 CHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAP 202
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E+ + DV+ GV+ +L G P
Sbjct: 203 EVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 116/272 (42%), Gaps = 35/272 (12%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 95
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND--------DEAIRLDWTKRVNIVK--- 197
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+A + +L +HRD+++ NILL+ K + DFG+AR + D V G
Sbjct: 156 QVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRKGDA 210
Query: 258 ----GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRV 313
++APE + V T + DV+SFGV+ E+ L +S P + + + +R+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRL 264
Query: 314 PSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ + + + C +P+ RP
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GD 294
+ + GT ++APE+ L + D++S GV+ +L G P GD
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 122/274 (44%), Gaps = 34/274 (12%)
Query: 86 VATEDFDI-KYCIGTGGYGSVYRA-QLPSGKKVALKKLHHS---ETELAFLESFQTEAHL 140
T+D+ + K +G G G V +G+K ALK L+ S E+ H+
Sbjct: 6 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHI 65
Query: 141 LSQIRHRNIVKLYGFCLH-KKCMFLIYKYMRRGSLFC-ILRNDDEAIRLDWTKR--VNIV 196
+ I+ +Y H K+C+ +I + M G LF I D+A T+R I+
Sbjct: 66 VC------ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAF----TEREAAEIM 115
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVV 253
+ + A+ +LH +I HRD+ N+L SK + V DFG A+ + +
Sbjct: 116 RDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTP 170
Query: 254 AGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIM-LIDLLD 310
T Y+APE+ + CD++S GV+ +L G P + +++P + I L
Sbjct: 171 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 230
Query: 311 QRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSR 344
P+P + V +D +++ L++ PT R
Sbjct: 231 YGFPNP-EWSEVSED---AKQLIRLLLKTDPTER 260
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 14/140 (10%)
Query: 159 KKCMFLIYKYMRRGSLFCILRN-DDEAIRLDWTKR--VNIVKSMAHALSYLHCDCIPSIV 215
+KC+ ++ + + G LF +++ D+A +T+R I+KS+ A+ YLH +I
Sbjct: 85 RKCLLIVMECLDGGELFSRIQDRGDQA----FTEREASEIMKSIGEAIQYLHSI---NIA 137
Query: 216 HRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTE 272
HRD+ N+L SK + DFG A+ S +S T T Y+APE+ +
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYVAPEVLGPEKYDK 196
Query: 273 KCDVYSFGVVALEVLMGRHP 292
CD++S GV+ +L G P
Sbjct: 197 SCDMWSLGVIMYILLCGYPP 216
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 123/274 (44%), Gaps = 34/274 (12%)
Query: 86 VATEDFDI-KYCIGTGGYGSVYRA-QLPSGKKVALKKLHHS---ETELAFLESFQTEAHL 140
T+D+ + K +G G G V +G+K ALK L+ S E+ H+
Sbjct: 25 AVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHI 84
Query: 141 LSQIRHRNIVKLYGFCLH-KKCMFLIYKYMRRGSLFC-ILRNDDEAIRLDWTKR--VNIV 196
+ I+ +Y H K+C+ +I + M G LF I D+A +T+R I+
Sbjct: 85 VC------ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQA----FTEREAAEIM 134
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFV---ADFGVARLLHSDSSNRTVV 253
+ + A+ +LH +I HRD+ N+L SK + V DFG A+ + +
Sbjct: 135 RDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTP 189
Query: 254 AGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GDLLSSVNPKIM-LIDLLD 310
T Y+APE+ + CD++S GV+ +L G P + +++P + I L
Sbjct: 190 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 249
Query: 311 QRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSR 344
P+P + V +D +++ L++ PT R
Sbjct: 250 YGFPNP-EWSEVSED---AKQLIRLLLKTDPTER 279
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLVGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S GV+ E++ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 95/212 (44%), Gaps = 26/212 (12%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G G YG VY+A + + VA+K++ E + E LL +++HRNI++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL----SYLHC-DC 210
H + LI++Y + +N D ++R ++KS + L ++ H C
Sbjct: 102 IHHNHRLHLIFEYAENDLKKYMDKNPDVSMR--------VIKSFLYQLINGVNFCHSRRC 153
Query: 211 IPSIVHRDISSNNILLN----SKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIAPE-L 264
+ HRD+ N+LL+ S+ + DFG+AR T T Y PE L
Sbjct: 154 L----HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 265 AYTMVLTEKCDVYSFGVVALEVLMGR--HPGD 294
+ + D++S + E+LM PGD
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGD 241
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLVGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S GV+ E++ G
Sbjct: 200 MGYKENVDIWSVGVIMGEMIKG 221
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 94/215 (43%), Gaps = 18/215 (8%)
Query: 91 FDIKYCIGTGGYGSVYRAQ-----LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
+D +G+G + V + + L K K+ S E + E +L +I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
H N++ L+ +K + LI + + G LF L + + T+ +K + + + Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE---FLKQILNGVYY 129
Query: 206 LHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDSSNRTVVAGTHGYIA 261
LH I H D+ NI+L K + DFG+A + + + + GT ++A
Sbjct: 130 LHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-GTPEFVA 185
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP--GD 294
PE+ L + D++S GV+ +L G P GD
Sbjct: 186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTK 191
E + E +L +I+H N++ L+ +K + LI + + G LF L + + T+
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATE 118
Query: 192 RVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNS----KLEAFVADFGVARLLHSDS 247
+K + + + YLH I H D+ NI+L K + DFG+A + +
Sbjct: 119 ---FLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE+ L + D++S GV+ +L G P
Sbjct: 173 EFKNIF-GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 22/204 (10%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLL-SQIRHRNIVKLYG 154
+G G +G V+R + +G + A+KK+ LE F+ E + + + IV LYG
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR--------LEVFRAEELMACAGLTSPRIVPLYG 133
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
+ + + + GSL +++ E L + + + L YLH I
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLVK---EQGCLPEDRALYYLGQALEGLEYLHSR---RI 187
Query: 215 VHRDISSNNILLNSK-LEAFVADFGVARLLHSDSSNRTV-----VAGTHGYIAPELAYTM 268
+H D+ ++N+LL+S A + DFG A L D + + + GT ++APE+
Sbjct: 188 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGR 247
Query: 269 VLTEKCDVYSFGVVALEVLMGRHP 292
K DV+S + L +L G HP
Sbjct: 248 SCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + +AGT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLAGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 37/274 (13%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND----------DEAIRLDWTKRVNIV-- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 197 -KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG 255
+A + +L +HRD+++ NILL+ K + DFG+AR ++ D V G
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD--XVRKG 208
Query: 256 TH----GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQ 311
++APE + V T + DV+SFGV+ E+ L +S P + + + +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCR 262
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+ + + + + C +P+ RP
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 97 IGTGGYGSVYRAQLP-SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
+G G Y +VY+ + + VALK++ E A + + E LL ++H NIV L+
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHDI 68
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
+K + L+++Y+ + L L + I + K + + L+Y H ++
Sbjct: 69 IHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKL--FLFQLLRGLAYCHRQ---KVL 122
Query: 216 HRDISSNNILLNSKLEAFVADFGVARL--LHSDSSNRTVVAGTHGYIAPE-LAYTMVLTE 272
HRD+ N+L+N + E +ADFG+AR + + + + VV T Y P+ L + +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLGSTDYST 180
Query: 273 KCDVYSFGVVALEVLMGR--HPGDLLSSVNPKIMLI 306
+ D++ G + E+ GR PG S+V ++ I
Sbjct: 181 QIDMWGVGCIFYEMATGRPLFPG---STVEEQLHFI 213
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 46/250 (18%)
Query: 67 GDEFSVWNYDGRITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSET 126
G S+ DG +IV F K +G G G++ + + VA+K++
Sbjct: 2 GSSPSLEQDDGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI----- 56
Query: 127 ELAFLESF-QTEAHLLSQI-RHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEA 184
L SF E LL + H N+++ FC K F +Y+ C +
Sbjct: 57 -LPECFSFADREVQLLRESDEHPNVIRY--FCTEKDRQF---QYI--AIELCAATLQEYV 108
Query: 185 IRLDWT----KRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILL-----NSKLEAFVA 235
+ D+ + + +++ L++LH +IVHRD+ +NIL+ + K++A ++
Sbjct: 109 EQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMIS 165
Query: 236 DFGVARLL----HSDSSNRTVVAGTHGYIAPELAYTMVLTEKC--------DVYSFGVVA 283
DFG+ + L HS S R+ V GT G+IAPE+ L+E C D++S G V
Sbjct: 166 DFGLCKKLAVGRHS-FSRRSGVPGTEGWIAPEM-----LSEDCKENPTYTVDIFSAGCVF 219
Query: 284 LEVLM-GRHP 292
V+ G HP
Sbjct: 220 YYVISEGSHP 229
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ-----MELDHERMSYLLYQMLXGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 200 MGYKENVDIWSVGCIMGE--MVRH 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 33/272 (12%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 95
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND----------DEAIRLDWTKRVNIV-- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 197 -KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVV 253
+A + +L +HRD+++ NILL+ K + DFG+AR ++ D +
Sbjct: 156 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 212
Query: 254 AGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRV 313
++APE + V T + DV+SFGV+ E+ L +S P + + + +R+
Sbjct: 213 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRL 266
Query: 314 PSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ + + + C +P+ RP
Sbjct: 267 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 298
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVK---- 151
IG G YG V A K +VA+KK+ E + + + E +L + RH N++
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQ-TYCQRTLREIQILLRFRHENVIGIRDI 109
Query: 152 LYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
L L I + + L+ +L++ +L + + L Y+H
Sbjct: 110 LRASTLEAMRDVYIVQDLMETDLYKLLKSQ----QLSNDHICYFLYQILRGLKYIHS--- 162
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLL---HSDSSNRTVVAGTHGYIAPELAY-T 267
+++HRD+ +N+L+N+ + + DFG+AR+ H + T T Y APE+ +
Sbjct: 163 ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 33/272 (12%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND----------DEAIRLDWTKRVNIV-- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 197 -KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVV 253
+A + +L +HRD+++ NILL+ K + DFG+AR ++ D +
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 210
Query: 254 AGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRV 313
++APE + V T + DV+SFGV+ E+ L +S P + + + +R+
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRL 264
Query: 314 PSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ + + + C +P+ RP
Sbjct: 265 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 117/273 (42%), Gaps = 35/273 (12%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 130
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND----------DEAIRLDWTKRVNIV-- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 197 -KSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTV 252
+A + +L CI HRD+++ NILL+ K + DFG+AR ++ D +
Sbjct: 191 SFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 253 VAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQR 312
++APE + V T + DV+SFGV+ E+ L +S P + + + +R
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRR 300
Query: 313 VPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ + + + + C +P+ RP
Sbjct: 301 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 333
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ-----MELDHERMSYLLYQMLXGIKHLH 136
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 137 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 192
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 193 MGYKENVDIWSVGCIMGE--MVRH 214
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 142
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 19/204 (9%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 109
Query: 156 CL-----HKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
K ++L+ ++ L+ +L+ L + + L Y+H
Sbjct: 110 IRAPTIEQMKDVYLV-THLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS-- 162
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY- 266
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+
Sbjct: 163 -ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 267 TMVLTEKCDVYSFGVVALEVLMGR 290
+ T+ D++S G + E+L R
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 156 CL-----HKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
K ++++ M L+ +L+ L + + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS-- 142
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY- 266
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+
Sbjct: 143 -ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 267 TMVLTEKCDVYSFGVVALEVLMGR 290
+ T+ D++S G + E+L R
Sbjct: 202 SKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 104/237 (43%), Gaps = 46/237 (19%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALK----KLHHSETELAFLESFQ 135
F++M T + +G G Y V A L +GK+ A+K + HS + + F+
Sbjct: 10 FEDMYKLTSEL-----LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV-----FR 59
Query: 136 TEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILR-----NDDEAIRLDWT 190
L ++NI++L F +L+++ ++ GS+ ++ N+ EA R
Sbjct: 60 EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASR---- 115
Query: 191 KRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDS 247
+V+ +A AL +LH I HRD+ NIL S + + DF + + ++
Sbjct: 116 ----VVRDVAAALDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNN 168
Query: 248 S-------NRTVVAGTHGYIAPELAYTMV-----LTEKCDVYSFGVVALEVLMGRHP 292
S T G+ Y+APE+ ++CD++S GVV +L G P
Sbjct: 169 SCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 142
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 33/272 (12%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 84
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND----------DEAIRLDWTKRVNIV-- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 197 -KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVV 253
+A + +L +HRD+++ NILL+ K + DFG+AR ++ D +
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 254 AGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRV 313
++APE + V T + DV+SFGV+ E+ L +S P + + + +R+
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRL 255
Query: 314 PSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ + + + C +P+ RP
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 116/272 (42%), Gaps = 33/272 (12%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 84
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND----------DEAIRLDWTKRVNIV-- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 197 -KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVV 253
+A + +L +HRD+++ NILL+ K + DFG+AR ++ D +
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 201
Query: 254 AGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRV 313
++APE + V T + DV+SFGV+ E+ L +S P + + + +R+
Sbjct: 202 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRL 255
Query: 314 PSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ + + + C +P+ RP
Sbjct: 256 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 92/212 (43%), Gaps = 9/212 (4%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAF--LESFQTEAHLLSQ 143
V DF+ +G G +G V A +++ K+ + + +E E +L+
Sbjct: 16 VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLAL 75
Query: 144 IRHRNIVKLYGFCLHK-KCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHA 202
+ + C ++ + +Y+ G L ++ + + + V ++
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ---QVGKFKEPQAVFYAAEISIG 132
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
L +LH I++RD+ +N++L+S+ +ADFG+ + D GT YIAP
Sbjct: 133 LFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAP 189
Query: 263 ELAYTMVLTEKCDVYSFGVVALEVLMGRHPGD 294
E+ + D +++GV+ E+L G+ P D
Sbjct: 190 EIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYXQRTLREIKILLRFRHENIIGINDI 93
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 146
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 142
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 97
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 98 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 150
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 89
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 142
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 91
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 144
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 146
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 200 MGYKENVDIWSVGCIMGE--MVRH 221
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
IGTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + VADFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 87
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 140
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 116/273 (42%), Gaps = 36/273 (13%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 94
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND---------DEAIRLDWTKRVNIV--- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
+A + +L +HRD+++ NILL+ K + DFG+AR + D V G
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRKGD 209
Query: 257 H----GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQR 312
++APE + V T + DV+SFGV+ E+ L +S P + + + +R
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRR 263
Query: 313 VPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+ + + + + C +P+ RP
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 124/281 (44%), Gaps = 33/281 (11%)
Query: 81 FQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHL 140
FQ M V + I IG+GG V++ + A+K ++ E + L+S++ E
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 141 LSQIRHRN--IVKLYGFCLHKKCMFLIYKYMRRGS--LFCILRNDDEAIRLDWTKRVNIV 196
L++++ + I++LY + + + ++++ M G+ L L+ + +D +R +
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYW 133
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVA 254
K+M A+ +H IVH D+ N L+ + + DFG+A + D+++ +
Sbjct: 134 KNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQV 189
Query: 255 GTHGYIAPELAYTMVLTEK-----------CDVYSFGVVALEVLMGRHPGDLLSSVNPKI 303
GT Y+ PE M + + DV+S G + + G+ P + + K+
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL 249
Query: 304 MLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSR 344
I + + P + +QD++ CL+ P R
Sbjct: 250 HAIIDPNHEIEFPDIPEKDLQDVLK------CCLKRDPKQR 284
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 87
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 140
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 109
Query: 156 CL-----HKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDC 210
K ++++ M L+ +L+ L + + L Y+H
Sbjct: 110 IRAPTIEQMKDVYIVQDLMET-DLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS-- 162
Query: 211 IPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY- 266
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+
Sbjct: 163 -ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 267 TMVLTEKCDVYSFGVVALEVLMGR 290
+ T+ D++S G + E+L R
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 94
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 147
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 95
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 148
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 86
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 139
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 146
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 93
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND----------DEAIRLDWTKRVNIV-- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 197 -KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG 255
+A + +L +HRD+++ NILL+ K + DFG+AR + D V G
Sbjct: 154 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRKG 208
Query: 256 TH----GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQ 311
++APE + V T + DV+SFGV+ E+ L +S P + + + +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCR 262
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+ + + + + C +P+ RP
Sbjct: 263 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 296
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 37/274 (13%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 84
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND----------DEAIRLDWTKRVNIV-- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 197 -KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAG 255
+A + +L +HRD+++ NILL+ K + DFG+AR + D V G
Sbjct: 145 SFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRKG 199
Query: 256 TH----GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQ 311
++APE + V T + DV+SFGV+ E+ L +S P + + + +
Sbjct: 200 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCR 253
Query: 312 RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
R+ + + + + C +P+ RP
Sbjct: 254 RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 39/275 (14%)
Query: 97 IGTGGYGSVYRA------QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR-NI 149
+G G +G V A + + + VA+K L T + +E +L I H N+
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH-RALMSELKILIHIGHHLNV 84
Query: 150 VKLYGFCLHKKC-MFLIYKYMRRGSLFCILRND----------DEAIRLDWTKRVNIV-- 196
V L G C + +I ++ + G+L LR+ E + D+ +++
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 197 -KSMAHALSYLHC-DCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVA 254
+A + +L CI HRD+++ NILL+ K + DFG+AR + D V
Sbjct: 145 SFQVAKGMEFLASRKCI----HRDLAARNILLSEKNVVKICDFGLARDIXKDPD--XVRK 198
Query: 255 GTH----GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLD 310
G ++APE + V T + DV+SFGV+ E+ L +S P + + +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFC 252
Query: 311 QRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRP 345
+R+ + + + + C +P+ RP
Sbjct: 253 RRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRP 287
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
+ ++ IG G +G V + + G ++ A KK+ E ++ F+ E ++ + H N
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPN 67
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFC------ILRNDDEAIRLDWTKRVNIVKSMAHA 202
I++LY ++L+ + G LF + R D A I+K + A
Sbjct: 68 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA---------RIMKDVLSA 118
Query: 203 LSYLHCDCIPSIVHRDISSNNILL-----NSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
++Y H ++ HRD+ N L +S L+ + DFG+A RT V GT
Sbjct: 119 VAYCHK---LNVAHRDLKPENFLFLTDSPDSPLK--LIDFGLAARFKPGKMMRTKV-GTP 172
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y++P++ + E CD +S GV+ +L G P
Sbjct: 173 YYVSPQVLEGLYGPE-CDEWSAGVMMYVLLCGYPP 206
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 162 MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISS 221
++ + +Y+ G L ++ + R V +A L +L I++RD+
Sbjct: 96 LYFVMEYVNGGDLMYHIQ---QVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKL 149
Query: 222 NNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGV 281
+N++L+S+ +ADFG+ + D GT YIAPE+ + D ++FGV
Sbjct: 150 DNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGV 209
Query: 282 VALEVLMGRHP 292
+ E+L G+ P
Sbjct: 210 LLYEMLAGQAP 220
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 6/131 (4%)
Query: 162 MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISS 221
++ + +Y+ G L ++ + R V +A L +L I++RD+
Sbjct: 417 LYFVMEYVNGGDLMYHIQ---QVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKL 470
Query: 222 NNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGV 281
+N++L+S+ +ADFG+ + D GT YIAPE+ + D ++FGV
Sbjct: 471 DNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGV 530
Query: 282 VALEVLMGRHP 292
+ E+L G+ P
Sbjct: 531 LLYEMLAGQAP 541
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 88 TEDFDIKYCIGTGGYG--SVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR 145
++ +D IG+G +G + R +L + + VA+K + E A E+ Q E +R
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKL-TKELVAVKYI---ERGAAIDENVQREIINHRSLR 74
Query: 146 HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
H NIV+ L + +I +Y G L+ + N A R + + + +SY
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICN---AGRFSEDEARFFFQQLLSGVSY 131
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAF--VADFGVAR--LLHSDSSNRTVVAGTHGYIA 261
H I HRD+ N LL+ + DFG ++ +LHS + GT YIA
Sbjct: 132 CHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIA 185
Query: 262 PELAYTMVLTEK-CDVYSFGVVALEVLMGRHP 292
PE+ K DV+S GV +L+G +P
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVGAYP 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 200 MGYKENVDIWSVGCIMGE--MVRH 221
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLAFRHENIIGINDI 91
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 144
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLVGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKV--ALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
+ ++ IG G +G V + + G ++ A KK+ E ++ F+ E ++ + H N
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVED--VDRFKQEIEIMKSLDHPN 84
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFC------ILRNDDEAIRLDWTKRVNIVKSMAHA 202
I++LY ++L+ + G LF + R D A I+K + A
Sbjct: 85 IIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAA---------RIMKDVLSA 135
Query: 203 LSYLHCDCIPSIVHRDISSNNILL-----NSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
++Y H ++ HRD+ N L +S L+ + DFG+A RT V GT
Sbjct: 136 VAYCHK---LNVAHRDLKPENFLFLTDSPDSPLK--LIDFGLAARFKPGKMMRTKV-GTP 189
Query: 258 GYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y++P++ + E CD +S GV+ +L G P
Sbjct: 190 YYVSPQVLEGLYGPE-CDEWSAGVMMYVLLCGYPP 223
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLL-SQIRHRNIVKLYG 154
+G G +G V+R + +G + A+KK+ LE F+ E + + + IV LYG
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGLSSPRIVPLYG 117
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
+ + + + GSL +++ + L + + + L YLH I
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTR---RI 171
Query: 215 VHRDISSNNILLNS-KLEAFVADFGVARLLHSDSSNRTV-----VAGTHGYIAPELAYTM 268
+H D+ ++N+LL+S A + DFG A L D +++ + GT ++APE+
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 269 VLTEKCDVYSFGVVALEVLMGRHP 292
K D++S + L +L G HP
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLXGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVA-LKKLHHSETELAFL--------ESFQT 136
+ ED +G G + +++ ++V +LH +E L L ESF
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKG---VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE 61
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
A ++S++ H+++V YG C L+ ++++ GSL L+ + I + W ++ +
Sbjct: 62 AASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVA 119
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS----NRTV 252
K +A A+ +L + +++H ++ + NILL + + + +L S + +
Sbjct: 120 KQLAWAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 253 VAGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGRHPGDL-LSSVNPKIMLIDLLD 310
+ ++ PE + L D +SFG E+ G GD LS+++ + L D
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG---GDKPLSALDSQRKLQFYED 233
Query: 311 Q-RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRV 349
+ ++P+P + ++ ++ C+ +P RP R
Sbjct: 234 RHQLPAPKAAE--------LANLINNCMDYEPDHRPSFRA 265
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 146
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV---AGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + + T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 94
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 147
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVV---AGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + + T Y APE+ +
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLL-SQIRHRNIVKLYG 154
+G G +G V+R + +G + A+KK+ LE F+ E + + + IV LYG
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGLSSPRIVPLYG 133
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
+ + + + GSL +++ + L + + + L YLH I
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTR---RI 187
Query: 215 VHRDISSNNILLNSK-LEAFVADFGVARLLHSDSSNRTV-----VAGTHGYIAPELAYTM 268
+H D+ ++N+LL+S A + DFG A L D +++ + GT ++APE+
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 269 VLTEKCDVYSFGVVALEVLMGRHP 292
K D++S + L +L G HP
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLK----CQHLSNDHICYFLYQILRGLKYIHS--- 146
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 178
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT---WTLCGTPEYLAPEIIL 232
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 49/246 (19%)
Query: 81 FQEMIVAT----EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQ 135
FQ I+ ++++IK+ IG G YG VY A + K VA+KK++ +L +
Sbjct: 16 FQGAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRIL 75
Query: 136 TEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI 195
E +L++++ I++L+ + + + + L+ +L D ++ + + +
Sbjct: 76 REITILNRLKSDYIIRLHDLIIPEDLL-------KFDELYIVLEIADSDLKKLFKTPIFL 128
Query: 196 ----VKSMAHAL----SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDS 247
VK++ + L ++H I+HRD+ N LLN + DFG+AR ++SD
Sbjct: 129 TEQHVKTILYNLLLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDK 185
Query: 248 SNRTV----------VAGTHG---------------YIAPELAYTMV-LTEKCDVYSFGV 281
V G H Y APEL T D++S G
Sbjct: 186 DIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGC 245
Query: 282 VALEVL 287
+ E+L
Sbjct: 246 IFAELL 251
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA++K+ E + + + E +L + RH NI+ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQ-TYCQRTLREIKILLRFRHENIIGINDI 93
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 146
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 144
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 145 HS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 198
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 199 SKGYNKAVDWWALGVLIYEMAAGYPP 224
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 97 IGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG G YG V A K +VA+KK+ E + + + E +L RH NI+ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQ-TYCQRTLREIKILLAFRHENIIGINDI 91
Query: 156 ----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCI 211
+ + I + + L+ +L+ L + + L Y+H
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHS--- 144
Query: 212 PSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNR---TVVAGTHGYIAPELAY-T 267
+++HRD+ +N+LLN+ + + DFG+AR+ D + T T Y APE+ +
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 268 MVLTEKCDVYSFGVVALEVLMGR 290
T+ D++S G + E+L R
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 126/280 (45%), Gaps = 35/280 (12%)
Query: 86 VATEDFDIKYCIGTGGYGSVYRAQLPSGKKVA-LKKLHHSETELAFL--------ESFQT 136
+ ED +G G + +++ ++V +LH +E L L ESF
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKG---VRREVGDYGQLHETEVLLKVLDKAHRNYSESFFE 61
Query: 137 EAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
A ++S++ H+++V YG C+ L+ ++++ GSL L+ + I + W ++ +
Sbjct: 62 AASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVA 119
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSS----NRTV 252
K +A A+ +L + +++H ++ + NILL + + + +L S + +
Sbjct: 120 KQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 253 VAGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGRHPGDL-LSSVNPKIMLIDLLD 310
+ ++ PE + L D +SFG E+ G GD LS+++ + L D
Sbjct: 177 LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG---GDKPLSALDSQRKLQFYED 233
Query: 311 Q-RVPSPIDDQTVIQDIILVSKIVFACLRSKPTSRPMQRV 349
+ ++P+P + ++ ++ C+ +P RP R
Sbjct: 234 RHQLPAPKAAE--------LANLINNCMDYEPDHRPSFRA 265
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 42/231 (18%)
Query: 89 EDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHR 147
+++ IK+ IG G YG VY A + K VA+KK++ +L + E +L++++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 148 NIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI----VKSMAHAL 203
I++LY + + + L+ +L D ++ + + + +K++ + L
Sbjct: 86 YIIRLYDLIIPDDLL-------KFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNL 138
Query: 204 ----SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV------- 252
+++H I+HRD+ N LLN V DFG+AR ++S+ V
Sbjct: 139 LLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENE 195
Query: 253 VAGTHG---------------YIAPELAYTMV-LTEKCDVYSFGVVALEVL 287
G H Y APEL T+ D++S G + E+L
Sbjct: 196 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL 246
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 181
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 182 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 237
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 238 MGYKENVDIWSVGCIMGE--MVRH 259
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 200 MGYKENVDIWSVGCIMGE--MVRH 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG+G G V A G VA+KKL + E LL + H+NI+ L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 156 CLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
+K + +L+ + M +L ++ + LD + ++ M + +LH
Sbjct: 90 FTPQKTLEEFQDVYLVMELMD-ANLCQVIH-----MELDHERMSYLLYQMLCGIKHLHS- 142
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S+N T T Y APE+
Sbjct: 143 --AGIIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYYRAPEVILG 197
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 198 MGYKENVDIWSVGCIMGELVKG 219
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR---IGRFXEPHARFYAAQIVLTFEYL 152
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 153 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 206
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 207 SKGYNKAVDWWALGVLIYEMAAGYPP 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 158
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 212
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 213 SKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 200 MGYKENVDIWSVGCIMGE--MVRH 221
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 144
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 145 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 200
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 201 MGYKENVDIWSVGCIMGE--MVRH 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 137
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 138 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 193
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 194 MGYKENVDIWSVGCIMGE--MVRH 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLL-SQIRHRNIVKLYG 154
+G G +G V+R + +G + A+KK+ LE F+ E + + + IV LYG
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR--------LEVFRVEELVACAGLSSPRIVPLYG 131
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
+ + + + GSL +++ + L + + + L YLH I
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIK---QMGCLPEDRALYYLGQALEGLEYLHTR---RI 185
Query: 215 VHRDISSNNILLNS-KLEAFVADFGVARLLHSDSSNRTV-----VAGTHGYIAPELAYTM 268
+H D+ ++N+LL+S A + DFG A L D +++ + GT ++APE+
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 269 VLTEKCDVYSFGVVALEVLMGRHP 292
K D++S + L +L G HP
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 142
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 143 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 198
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 199 MGYKENVDIWSVGCIMGE--MVRH 220
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 144
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 145 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 200
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 201 MGYKENVDIWSVGCIMGE--MVRH 222
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 85 IVATEDFDIKYCIGTGGYGSVYRA--QLPSGKKVALKKLHHSETELAFLESFQTEAHLLS 142
IVA + +++K CI GG G +Y A + +G+ V LK L HS + E L+
Sbjct: 77 IVAGQ-YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLA 134
Query: 143 QIRHRNIVKLYGFCLHKK-----CMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVK 197
++ H +IV+++ F H +++ +Y+ SL + +L + + +
Sbjct: 135 EVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL-----KRSKGQKLPVAEAIAYLL 189
Query: 198 SMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTH 257
+ ALSYLH +V+ D+ NI+L + + D G ++S + GT
Sbjct: 190 EILPALSYLHSI---GLVYNDLKPENIMLTEEQLKLI-DLGAVSRINSFG----YLYGTP 241
Query: 258 GYIAPELAYTMVLTEKCDVYSFG 280
G+ APE+ T T D+Y+ G
Sbjct: 242 GFQAPEIVRTGP-TVATDIYTVG 263
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 136
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 137 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 192
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 193 MGYKENVDIWSVGCIMGE--MVRH 214
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 137
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 138 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 193
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 194 MGYKENVDIWSVGCIMGE--MVRH 215
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 23/204 (11%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +L+ + M +L +++ + LD + ++ M + +LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 181
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 182 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 237
Query: 268 MVLTEKCDVYSFGVVALEVLMGRH 291
M E D++S G + E M RH
Sbjct: 238 MGYKENVDIWSVGCIMGE--MVRH 259
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 34 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 93
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 94 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 147
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 148 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WTLCGTPEYLAPEIILSKGYNKA 204
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 205 VDWWALGVLIYEMAAGYPP 223
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
T+ +++K IG G Y R + + A+K + S+ + E + LL +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPT--EEIEI---LLRYGQH 75
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLF-CILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
NI+ L K ++++ + M+ G L ILR + R + ++ ++ + Y
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSER----EASAVLFTITKTVEY 131
Query: 206 LHCDCIPSIVHRDISSNNILL---NSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIA 261
LH +VHRD+ +NIL + E+ + DFG A+ L +++ T ++A
Sbjct: 132 LHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVA 188
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ CD++S GV+ +L G P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 23/172 (13%)
Query: 133 SFQTEAHLLSQIRHRNIVKLYG--FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT 190
+ + E LL ++RH+N+++L + K+ M+++ +Y C ++ +++
Sbjct: 52 NVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY-----CVCGMQEMLDSVP---E 103
Query: 191 KRVNIVKSMAH------ALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244
KR + ++ + L YLH IVH+DI N+LL + ++ GVA LH
Sbjct: 104 KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 245 SDSSNRT--VVAGTHGYIAPELAYTMVLTE--KCDVYSFGVVALEVLMGRHP 292
+++ T G+ + PE+A + K D++S GV + G +P
Sbjct: 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 144
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 145 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 200
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 201 MGYKENVDIWSVGCIMGEMIKG 222
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFAEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYL 178
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 232
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 233 SKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 122/284 (42%), Gaps = 33/284 (11%)
Query: 78 RITFQEMIVATEDFDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTE 137
+ FQ M V + I IG+GG V++ + A+K ++ E + L+S++ E
Sbjct: 17 NLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNE 76
Query: 138 AHLLSQIRHRN--IVKLYGFCLHKKCMFLIYKYMRRGS--LFCILRNDDEAIRLDWTKRV 193
L++++ + I++LY + + + ++++ M G+ L L+ + +D +R
Sbjct: 77 IAYLNKLQQHSDKIIRLYDYEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERK 130
Query: 194 NIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RT 251
+ K+M A+ +H IVH D+ N L+ + + DFG+A + D +
Sbjct: 131 SYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKD 186
Query: 252 VVAGTHGYIAPELAYTMVLTEK-----------CDVYSFGVVALEVLMGRHPGDLLSSVN 300
GT Y+ PE M + + DV+S G + + G+ P + +
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 301 PKIMLIDLLDQRVPSPIDDQTVIQDIILVSKIVFACLRSKPTSR 344
K+ I + + P + +QD++ CL+ P R
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKDLQDVLK------CCLKRDPKQR 284
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPEVVTRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 200 MGYKENVDIWSVGCIMGEMIKG 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WTLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N++++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIII 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 93/214 (43%), Gaps = 24/214 (11%)
Query: 88 TEDFDIKYCIGTGGYGSVYRAQLPSGKK----VALKKLHHSETELAFLESFQTEAHLLSQ 143
++ +++ IG G +G A+L K+ VA+K + E E+ + E
Sbjct: 18 SDRYELVKDIGAGNFGV---ARLMRDKQANELVAVKYIERGEK---IDENVKREIINHRS 71
Query: 144 IRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHAL 203
+RH NIV+ L + ++ +Y G LF + N A R + + + +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGV 128
Query: 204 SYLHCDCIPSIVHRDISSNNILLNSKLEAF--VADFGV--ARLLHSDSSNRTVVAGTHGY 259
SY H + HRD+ N LL+ +ADFG A +LHS + GT Y
Sbjct: 129 SYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS---AVGTPAY 182
Query: 260 IAPELAYTMVLTEK-CDVYSFGVVALEVLMGRHP 292
IAPE+ K DV+S GV +L+G +P
Sbjct: 183 IAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYP 216
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ ++ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYQMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 145
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + V T Y APE+
Sbjct: 146 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVV-TRYYRAPEVILG 201
Query: 268 MVLTEKCDVYSFGVVALEVLMG 289
M E D++S G + E++ G
Sbjct: 202 MGYKENVDIWSVGCIMGEMIKG 223
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N++++ + V DFG+A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 86/199 (43%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N++++ + V DFG+A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT Y+AP +
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPAIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQ-TEAHLLSQIRHRNIVKLYG 154
+G GG+G V Q+ +GK A KKL + E+ E +L ++ R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
K + L+ M G L + + +A + V + L LH + I
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLHRE---RI 307
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKC 274
V+RD+ NILL+ ++D G+A + + + V GT GY+APE+ T
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSP 366
Query: 275 DVYSFGVVALEVLMGRHP 292
D ++ G + E++ G+ P
Sbjct: 367 DWWALGCLLYEMIAGQSP 384
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N++++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 17/200 (8%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG+G G V A G VA+KKL + E LL + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 156 CLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
+K + +L+ + M I + LD + ++ M + +LH
Sbjct: 92 FTPQKTLEEFQDVYLVMELMDANLCQVI------HMELDHERMSYLLYQMLCGIKHLHS- 144
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMV 269
I+HRD+ +NI++ S + DFG+AR ++ V T Y APE+ M
Sbjct: 145 --AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVV-TRYYRAPEVILGMG 201
Query: 270 LTEKCDVYSFGVVALEVLMG 289
D++S G + E++ G
Sbjct: 202 YAANVDIWSVGCIMGELVKG 221
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 18/211 (8%)
Query: 90 DFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQ-TEAHLLSQIRHR 147
DF + IG GG+G VY + +GK A+K L ++ E+ E +LS +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 148 N----IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT-KRVNIVKSMAHA 202
+ + Y F K F++ M G L L D I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
+ +V+RD+ NILL+ ++D G+A + +V GTHGY+AP
Sbjct: 309 HNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--GTHGYMAP 359
Query: 263 E-LAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E L + D +S G + ++L G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 18/211 (8%)
Query: 90 DFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQ-TEAHLLSQIRHR 147
DF + IG GG+G VY + +GK A+K L ++ E+ E +LS +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 148 N----IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT-KRVNIVKSMAHA 202
+ + Y F K F++ M G L L D I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
+ +V+RD+ NILL+ ++D G+A + +V GTHGY+AP
Sbjct: 309 HNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--GTHGYMAP 359
Query: 263 E-LAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E L + D +S G + ++L G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 18/211 (8%)
Query: 90 DFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQ-TEAHLLSQIRHR 147
DF + IG GG+G VY + +GK A+K L ++ E+ E +LS +
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 249
Query: 148 N----IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT-KRVNIVKSMAHA 202
+ + Y F K F++ M G L L D I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
+ +V+RD+ NILL+ ++D G+A + +V GTHGY+AP
Sbjct: 309 HNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--GTHGYMAP 359
Query: 263 E-LAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E L + D +S G + ++L G P
Sbjct: 360 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 87/211 (41%), Gaps = 18/211 (8%)
Query: 90 DFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQ-TEAHLLSQIRHR 147
DF + IG GG+G VY + +GK A+K L ++ E+ E +LS +
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 248
Query: 148 N----IVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWT-KRVNIVKSMAHA 202
+ + Y F K F++ M G L L D I+ + H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFIL-DLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHM 307
Query: 203 LSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAP 262
+ +V+RD+ NILL+ ++D G+A + +V GTHGY+AP
Sbjct: 308 HNRF-------VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--GTHGYMAP 358
Query: 263 E-LAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
E L + D +S G + ++L G P
Sbjct: 359 EVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N++++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 48/237 (20%)
Query: 91 FDIKYCIGTGGYGSVY--RAQLPSG--KKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
F I+ IG G + SVY AQL G +K+ALK L + + Q L+
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC----LTVAGG 78
Query: 147 RNIVKLYGFCLHKKCMFLI-YKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
++ V +C K +I Y+ S IL + L + + + ++ AL
Sbjct: 79 QDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS------LSFQEVREYMLNLFKALKR 132
Query: 206 LHCDCIPSIVHRDISSNNILLNSKLEAF-VADFGVARLLHSD-----------------S 247
+H IVHRD+ +N L N +L+ + + DFG+A+ H S
Sbjct: 133 IHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCS 189
Query: 248 SNRTVV-----------AGTHGYIAPE-LAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
N+ + AGT G+ APE L T D++S GV+ L +L GR+P
Sbjct: 190 QNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 7/198 (3%)
Query: 97 IGTGGYGSVYRAQL-PSGKKVALKKLHHSETELAFLESFQ-TEAHLLSQIRHRNIVKLYG 154
+G GG+G V Q+ +GK A KKL + E+ E +L ++ R +V L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 155 FCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSI 214
K + L+ M G L + + +A + V + L LH + I
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQA-GFPEARAVFYAAEICCGLEDLHRE---RI 307
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKC 274
V+RD+ NILL+ ++D G+A + + + V GT GY+APE+ T
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRV-GTVGYMAPEVVKNERYTFSP 366
Query: 275 DVYSFGVVALEVLMGRHP 292
D ++ G + E++ G+ P
Sbjct: 367 DWWALGCLLYEMIAGQSP 384
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 32/217 (14%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQT---EAHLLSQIRHRNIVKL 152
+G G +V+R + +G A+K ++ ++FL E +L ++ H+NIVKL
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNN----ISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 153 YGF-----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+ HK LI ++ GSL+ +L A L ++ + +++ + +++L
Sbjct: 73 FAIEEETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 208 CDCIPSIVHRDISSNNILL----NSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
+ IVHR+I NI+ + + + DFG AR L D + GT Y+ P+
Sbjct: 130 EN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVXLYGTEEYLHPD 185
Query: 264 LAYTMVLTEK--------CDVYSFGVVALEVLMGRHP 292
+ VL + D++S GV G P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 88 TEDFDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRH 146
T+ +++K IG G Y R + + A+K + S+ + E + LL +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPT--EEIEI---LLRYGQH 75
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLF-CILRNDDEAIRLDWTKRVNIVKSMAHALSY 205
NI+ L K ++++ + + G L ILR + R + ++ ++ + Y
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSER----EASAVLFTITKTVEY 131
Query: 206 LHCDCIPSIVHRDISSNNILL---NSKLEAF-VADFGVARLLHSDSSNRTVVAGTHGYIA 261
LH +VHRD+ +NIL + E+ + DFG A+ L +++ T ++A
Sbjct: 132 LHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVA 188
Query: 262 PELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
PE+ CD++S GV+ L G P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + +VKL
Sbjct: 48 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 107
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYLHS---LD 161
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N++++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 162 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 218
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPP 237
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 154
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 211
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN--IVKLYG 154
IG+GG V++ + A+K ++ E + L+S++ E L++++ + I++LY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 155 FCLHKKCMFLIYKYMRRGS--LFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
+ + + ++++ M G+ L L+ + +D +R + K+M A+ +H
Sbjct: 124 YEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH--- 174
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVL 270
IVH D+ N L+ + + DFG+A + D+++ + GT Y+ PE M
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 271 TEK-----------CDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDD 319
+ + DV+S G + + G+ P + + K+ I + + P
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 320 QTVIQDIILVSKIVFACLRSKPTSR 344
+ +QD++ CL+ P R
Sbjct: 294 EKDLQDVLK------CCLKRDPKQR 312
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVLTE 272
+HRD+++ NILL+ K + DFG+AR ++ D + ++APE + V T
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 279
Query: 273 KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKI 332
+ DV+SFGV+ E+ L +S P + + + +R+ + + +
Sbjct: 280 QSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 333
Query: 333 VFACLRSKPTSRP 345
+ C +P+ RP
Sbjct: 334 MLDCWHGEPSQRP 346
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN--IVKLYG 154
IG+GG V++ + A+K ++ E + L+S++ E L++++ + I++LY
Sbjct: 20 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 79
Query: 155 FCLHKKCMFLIYKYMRRGS--LFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
+ + + ++++ M G+ L L+ + +D +R + K+M A+ +H
Sbjct: 80 YEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH--- 130
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVL 270
IVH D+ N L+ + + DFG+A + D+++ + GT Y+ PE M
Sbjct: 131 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 189
Query: 271 TEK-----------CDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDD 319
+ + DV+S G + + G+ P + + K+ I + + P
Sbjct: 190 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 249
Query: 320 QTVIQDIILVSKIVFACLRSKPTSR 344
+ +QD++ CL+ P R
Sbjct: 250 EKDLQDVLK------CCLKRDPKQR 268
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVLTE 272
+HRD+++ NILL+ K + DFG+AR ++ D + ++APE + V T
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 274
Query: 273 KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKI 332
+ DV+SFGV+ E+ L +S P + + + +R+ + + +
Sbjct: 275 QSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 328
Query: 333 VFACLRSKPTSRP 345
+ C +P+ RP
Sbjct: 329 MLDCWHGEPSQRP 341
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVLTE 272
+HRD+++ NILL+ K + DFG+AR ++ D + ++APE + V T
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 281
Query: 273 KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKI 332
+ DV+SFGV+ E+ L +S P + + + +R+ + + +
Sbjct: 282 QSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 335
Query: 333 VFACLRSKPTSRP 345
+ C +P+ RP
Sbjct: 336 MLDCWHGEPSQRP 348
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 117/265 (44%), Gaps = 33/265 (12%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN--IVKLYG 154
IG+GG V++ + A+K ++ E + L+S++ E L++++ + I++LY
Sbjct: 16 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 75
Query: 155 FCLHKKCMFLIYKYMRRGS--LFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
+ + + ++++ M G+ L L+ +D +R + K+M A+ +H
Sbjct: 76 YEITDQYIYMV---MECGNIDLNSWLKKKKS---IDPWERKSYWKNMLEAVHTIHQH--- 126
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVL 270
IVH D+ N L+ + + DFG+A + D+++ + GT Y+ PE M
Sbjct: 127 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 271 TEK-----------CDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDD 319
+ + DV+S G + + G+ P + + K+ I + + P
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 245
Query: 320 QTVIQDIILVSKIVFACLRSKPTSR 344
+ +QD++ CL+ P R
Sbjct: 246 EKDLQDVLK------CCLKRDPKQR 264
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHSDSS--NRTVVAGTHGYIAPELAYTMVLTE 272
+HRD+++ NILL+ K + DFG+AR ++ D + ++APE + V T
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 272
Query: 273 KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKI 332
+ DV+SFGV+ E+ L +S P + + + +R+ + + +
Sbjct: 273 QSDVWSFGVLLWEIF------SLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQT 326
Query: 333 VFACLRSKPTSRP 345
+ C +P+ RP
Sbjct: 327 MLDCWHGEPSQRP 339
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL-FCILRNDDEAIRLDWT 190
E + EA + ++H +IV+L +++++++M L F I++ D
Sbjct: 73 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 132
Query: 191 KRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDS 247
+ ++ + AL Y H + +I+HRD+ + +LL SK + + FGVA L
Sbjct: 133 VASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 189
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
GT ++APE+ + DV+ GV+ +L G P
Sbjct: 190 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 97 IGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQT---EAHLLSQIRHRNIVKL 152
+G G +V+R + +G A+K ++ ++FL E +L ++ H+NIVKL
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNN----ISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 153 YGF-----CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+ HK LI ++ GSL+ +L A L ++ + +++ + +++L
Sbjct: 73 FAIEEETTTRHK---VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR 129
Query: 208 CDCIPSIVHRDISSNNILL----NSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE 263
+ IVHR+I NI+ + + + DFG AR L D ++ GT Y+ P+
Sbjct: 130 EN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-GTEEYLHPD 185
Query: 264 LAYTMVLTEK--------CDVYSFGVVALEVLMGRHP 292
+ VL + D++S GV G P
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 41 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 100
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 101 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYLHS---LD 154
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 155 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 211
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 212 VDWWALGVLIYEMAAGYPP 230
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 7/165 (4%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSL-FCILRNDDEAIRLDWT 190
E + EA + ++H +IV+L +++++++M L F I++ D
Sbjct: 71 EDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEA 130
Query: 191 KRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAF---VADFGVARLLHSDS 247
+ ++ + AL Y H + +I+HRD+ + +LL SK + + FGVA L
Sbjct: 131 VASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
Query: 248 SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
GT ++APE+ + DV+ GV+ +L G P
Sbjct: 188 LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN--IVKLYG 154
IG+GG V++ + A+K ++ E + L+S++ E L++++ + I++LY
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 76
Query: 155 FCLHKKCMFLIYKYMRRGS--LFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
+ + + ++++ M G+ L L+ + +D +R + K+M A+ +H
Sbjct: 77 YEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH--- 127
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVL 270
IVH D+ N L+ + + DFG+A + D+++ + GT Y+ PE M
Sbjct: 128 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 271 TEK-----------CDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDD 319
+ + DV+S G + + G+ P + + K+ I + + P
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 246
Query: 320 QTVIQDIILVSKIVFACLRSKPTSR 344
+ +QD++ CL+ P R
Sbjct: 247 EKDLQDVLK------CCLKRDPKQR 265
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 21/200 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 148
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 149 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 204
Query: 268 MVLTEKCDVYSFGVVALEVL 287
M E D++S G + E++
Sbjct: 205 MGYKENVDLWSVGCIMGEMV 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 69 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 128
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y+ G +F LR R + YLH
Sbjct: 129 FSFKDNSNLYMVMEYVPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 182
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 183 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 239
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 240 VDWWALGVLIYEMAAGYPP 258
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 87/206 (42%), Gaps = 11/206 (5%)
Query: 89 EDFDIKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRH 146
+ FD +GTG +G V + SG A+K L + +L +E E +L +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 147 RNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYL 206
+VKL ++++ +Y+ G +F LR R + YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYL 157
Query: 207 HCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAY 266
H +++RD+ N+L++ + V DFG A+ + + + GT +APE+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---WXLCGTPEALAPEIIL 211
Query: 267 TMVLTEKCDVYSFGVVALEVLMGRHP 292
+ + D ++ GV+ E+ G P
Sbjct: 212 SKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 27/201 (13%)
Query: 132 ESFQTEAHLLSQIRHRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLD--W 189
+ F+ E +++ I++ + G + +++IY+YM S IL+ D+ LD +
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDS---ILKFDEYFFVLDKNY 144
Query: 190 TKRVNI------VKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL 243
T + I +KS+ ++ SY+H + +I HRD+ +NIL++ ++DFG + +
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
Query: 244 HSDSSNRTVVAGTHGYIAPEL--AYTMVLTEKCDVYSFGVVALEVLMGRHPGDLLSSVNP 301
+ GT+ ++ PE + K D++S G+ + P L
Sbjct: 203 VDKKIKGS--RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL------ 254
Query: 302 KIMLIDLLD----QRVPSPID 318
KI L++L + + + P+D
Sbjct: 255 KISLVELFNNIRTKNIEYPLD 275
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLE-SFQTEAHLLSQIRHRNIVKLYGF 155
+G G G+V G+ VA+K++ ++A +E TE+ H N+++ Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRYYCS 95
Query: 156 CLHKKCMFLIYKY--MRRGSLFCILRNDDEAIRLDWTKR-VNIVKSMAHALSYLHCDCIP 212
+ +++ + + L DE ++L +++++ +A +++LH
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 152
Query: 213 SIVHRDISSNNILLNS-------------KLEAFVADFGVARLLHSDS----SNRTVVAG 255
I+HRD+ NIL+++ L ++DFG+ + L S N +G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 256 THGYIAPEL---AYTMVLTEKCDVYSFGVVALEVL-MGRHP-GDLLSSVNPKIMLIDLLD 310
T G+ APEL + LT D++S G V +L G+HP GD S + I I LD
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD 272
Query: 311 Q 311
+
Sbjct: 273 E 273
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + V T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV-TRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVL 287
M E D++S G + E++
Sbjct: 200 MGYKENVDIWSVGCIMGEMV 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 21/200 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 137
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + S T T Y APE+
Sbjct: 138 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYRAPEVILG 193
Query: 268 MVLTEKCDVYSFGVVALEVL 287
M E D++S G + E++
Sbjct: 194 MGYKENVDLWSVGCIMGEMV 213
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 33/265 (12%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN--IVKLYG 154
IG+GG V++ + A+K ++ E + L+S++ E L++++ + I++LY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 155 FCLHKKCMFLIYKYMRRGS--LFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
+ + + ++++ M G+ L L+ + +D +R + K+M A+ +H
Sbjct: 124 YEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH--- 174
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVL 270
IVH D+ N L+ + + DFG+A + D+++ + GT Y+ PE M
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 233
Query: 271 TEK-----------CDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDD 319
+ + DV+S G + + G+ P + + K+ I + + P
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 320 QTVIQDIILVSKIVFACLRSKPTSR 344
+ +QD++ CL+ P R
Sbjct: 294 EKDLQDVLK------CCLKRDPKQR 312
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLE-SFQTEAHLLSQIRHRNIVKLYGF 155
+G G G+V G+ VA+K++ ++A +E TE+ H N+++ Y
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRYYCS 95
Query: 156 CLHKKCMFLIYKY--MRRGSLFCILRNDDEAIRLDWTKR-VNIVKSMAHALSYLHCDCIP 212
+ +++ + + L DE ++L +++++ +A +++LH
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 152
Query: 213 SIVHRDISSNNILLNS-------------KLEAFVADFGVARLLHSDS----SNRTVVAG 255
I+HRD+ NIL+++ L ++DFG+ + L S N +G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 256 THGYIAPEL---AYTMVLTEKCDVYSFGVVALEVL-MGRHP-GDLLSSVNPKIMLIDLLD 310
T G+ APEL + LT D++S G V +L G+HP GD S + I I LD
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLD 272
Query: 311 Q 311
+
Sbjct: 273 E 273
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 97 IGTGGYGSVYRA-QLPSGKKVALKKLHHSET------ELAFLESFQTEAHLLSQIRHRNI 149
+G+G +G V+ A K+V +K + + E L E +LS++ H NI
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCD 209
+K+ ++ L+ + + GS + D RLD I + + A+ YL
Sbjct: 92 IKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR-- 147
Query: 210 CIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPE-LAYTM 268
+ I+HRDI NI++ + DFG A L T GT Y APE L
Sbjct: 148 -LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FCGTIEYCAPEVLMGNP 205
Query: 269 VLTEKCDVYSFGVVALEVLMGRHP 292
+ +++S GV ++ +P
Sbjct: 206 YRGPELEMWSLGVTLYTLVFEENP 229
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 112 SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFC--LHKKCMFLIYKYM 169
+G+ VA+K L ++ ++ E +L + H +I+K G C + L+ +Y+
Sbjct: 59 TGEMVAVKALK-ADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYV 117
Query: 170 RRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSK 229
GSL L + + + + + ++YLH +HRD+++ N+LL++
Sbjct: 118 PLGSLRDYLPRHSIGL----AQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDND 170
Query: 230 LEAFVADFGVARLL---HSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEV 286
+ DFG+A+ + H R + APE DV+SFGV E+
Sbjct: 171 RLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 230
Query: 287 L 287
L
Sbjct: 231 L 231
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 18/202 (8%)
Query: 97 IGTGGYG-SVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG+G +G + S + VA+K + E E+ + E +RH NIV+
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEK---IDENVKREIINHRSLRHPNIVRFKEV 82
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
L + ++ +Y G LF + N A R + + + +SY H +
Sbjct: 83 ILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHA---MQVC 136
Query: 216 HRDISSNNILLNSKLEAF--VADFGVAR--LLHSDSSNRTVVAGTHGYIAPELAYTMVLT 271
HRD+ N LL+ + DFG ++ +LHS + GT YIAPE+
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKEYD 193
Query: 272 EK-CDVYSFGVVALEVLMGRHP 292
K DV+S GV +L+G +P
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYP 215
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + + KL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N++++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + + KL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N++++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 38/228 (16%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLE-SFQTEAHLLSQIRHRNIVKLYGF 155
+G G G+V G+ VA+K++ ++A +E TE+ H N+++ Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRYYCS 77
Query: 156 CLHKKCMFLIYKY--MRRGSLFCILRNDDEAIRLDWTKR-VNIVKSMAHALSYLHCDCIP 212
+ +++ + + L DE ++L +++++ +A +++LH
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 134
Query: 213 SIVHRDISSNNILLNS-------------KLEAFVADFGVARLLHS-DSSNRTVV---AG 255
I+HRD+ NIL+++ L ++DFG+ + L S SS RT + +G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194
Query: 256 THGYIAPE-------LAYTMVLTEKCDVYSFGVVALEVL-MGRHP-GD 294
T G+ APE L LT D++S G V +L G+HP GD
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 97 IGTGGYGSV---YRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLY 153
IG+G G V Y A L + VA+KKL + E L+ + H+NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 154 GFCLHKKCM------FLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLH 207
+K + +++ + M +L +++ + LD + ++ M + +LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLH 143
Query: 208 CDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYT 267
I+HRD+ +NI++ S + DFG+AR + V T Y APE+
Sbjct: 144 S---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVV-TRYYRAPEVILG 199
Query: 268 MVLTEKCDVYSFGVVALEVL 287
M E D++S G + E++
Sbjct: 200 MGYKENVDLWSVGCIMGEMV 219
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E +L + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N++++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 112 SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHK--KCMFLIYKYM 169
+G+ VA+K L ++ ++ E +L + H +I+K G C + K + L+ +Y+
Sbjct: 42 TGEMVAVKALK-ADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 170 RRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSK 229
GSL R+ + + + + + ++YLH +HR++++ N+LL++
Sbjct: 101 PLGSL----RDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDND 153
Query: 230 LEAFVADFGVARLL---HSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEV 286
+ DFG+A+ + H R + APE DV+SFGV E+
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Query: 287 L 287
L
Sbjct: 214 L 214
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + + +G A+K L + +L +E E +L + + KL
Sbjct: 49 TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHLR---RIGRFXEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N++++ + V DFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 22/154 (14%)
Query: 149 IVKLYGFCLHKKCMFLIYKYMRRGSLFCI-------LRNDDEAIRLDWTKRVNIVKSMAH 201
++ L+ + + LI +Y G +F + + ++++ IRL +K +
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRL--------IKQILE 142
Query: 202 ALSYLHCDCIPSIVHRDISSNNILLNSKL---EAFVADFGVARLLHSDSSNRTVVAGTHG 258
+ YLH + +IVH D+ NILL+S + + DFG++R + R ++ GT
Sbjct: 143 GVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIM-GTPE 198
Query: 259 YIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHP 292
Y+APE+ +T D+++ G++A +L P
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETEL--------AFL-ESFQTEAHLL 141
+ ++ I +G YG+V G VA+K++ ++ ++ +FL + E LL
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 142 SQIRHRNIVKLYGFCLH-----KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
+ H NI+ L +H ++L+ + MR I D+ I + +I
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI---HDQRIVI---SPQHIQ 137
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
M H L LH +VHRD+ NILL + + DF +AR +D +N+T
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTH 196
Query: 257 HGYIAPELAYTMV-LTEKCDVYSFGVVALEVL 287
Y APEL T+ D++S G V E+
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 11/199 (5%)
Query: 96 CIGTGGYGSVYRAQ-LPSGKKVALKKLHHSET-ELAFLESFQTEAHLLSQIRHRNIVKLY 153
+GTG +G V + +G A+K L + +L +E E + + +VKL
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLE 108
Query: 154 GFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPS 213
++++ +Y G +F LR R + YLH
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LD 162
Query: 214 IVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEK 273
+++RD+ N+L++ + VADFG A+ + + + GT Y+APE+ + +
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---WXLCGTPEYLAPEIILSKGYNKA 219
Query: 274 CDVYSFGVVALEVLMGRHP 292
D ++ GV+ E+ G P
Sbjct: 220 VDWWALGVLIYEMAAGYPP 238
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 87/202 (43%), Gaps = 18/202 (8%)
Query: 97 IGTGGYG-SVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG+G +G + S + VA+K + E A + + E +RH NIV+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAA---NVKREIINHRSLRHPNIVRFKEV 83
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
L + ++ +Y G LF + N A R + + + +SY H +
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHA---MQVC 137
Query: 216 HRDISSNNILLNSKLEAF--VADFGVAR--LLHSDSSNRTVVAGTHGYIAPELAYTMVLT 271
HRD+ N LL+ + DFG ++ +LHS + GT YIAPE+
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKEYD 194
Query: 272 EK-CDVYSFGVVALEVLMGRHP 292
K DV+S GV +L+G +P
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYP 216
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKVALKKLHHSETEL--------AFL-ESFQTEAHLL 141
+ ++ I +G YG+V G VA+K++ ++ ++ +FL + E LL
Sbjct: 24 YTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL 83
Query: 142 SQIRHRNIVKLYGFCLH-----KKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIV 196
+ H NI+ L +H ++L+ + MR I D+ I + +I
Sbjct: 84 NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI---HDQRIVI---SPQHIQ 137
Query: 197 KSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTVVAGT 256
M H L LH +VHRD+ NILL + + DF +AR +D +N+T
Sbjct: 138 YFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTAD-ANKTHYVTH 196
Query: 257 HGYIAPELAYTMV-LTEKCDVYSFGVVALEVL 287
Y APEL T+ D++S G V E+
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 112 SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHK--KCMFLIYKYM 169
+G+ VA+K L ++ ++ E +L + H +I+K G C + K + L+ +Y+
Sbjct: 42 TGEMVAVKALK-ADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYV 100
Query: 170 RRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSK 229
GSL R+ + + + + + ++YLH +HR++++ N+LL++
Sbjct: 101 PLGSL----RDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDND 153
Query: 230 LEAFVADFGVARLL---HSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEV 286
+ DFG+A+ + H R + APE DV+SFGV E+
Sbjct: 154 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
Query: 287 L 287
L
Sbjct: 214 L 214
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 15/107 (14%)
Query: 193 VNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSNRTV 252
++I +A A+ +LH ++HRD+ +NI V DFG+ + D +TV
Sbjct: 167 LHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 253 VA------------GTHGYIAPELAYTMVLTEKCDVYSFGVVALEVL 287
+ GT Y++PE + + K D++S G++ E+L
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 90 DFDIKYCIGTGGYGSVYRAQLPSGK-KVALKKLHHSETELAFLESFQTEAHLLSQIRHRN 148
DF+ C+G GG+G V+ A+ A+K++ ELA E E L+++ H
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA-REKVMREVKALAKLEHPG 65
Query: 149 IVKLYGFCLH 158
IV+ + L
Sbjct: 66 IVRYFNAWLE 75
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 103/240 (42%), Gaps = 36/240 (15%)
Query: 93 IKYCIGTGGYGSVYRAQ-LPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIR-HRNIV 150
++ + GG+ VY AQ + SG++ ALK+L +E E + E + ++ H NIV
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKN--RAIIQEVCFMKKLSGHPNIV 89
Query: 151 KLYGFCLHK----------KCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMA 200
+ FC + FL+ + +G L L+ + L + I
Sbjct: 90 Q---FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC 146
Query: 201 HALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL-----HSDSSNRTVVA- 254
A+ ++H P I+HRD+ N+LL+++ + DFG A + +S S+ R +
Sbjct: 147 RAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVE 205
Query: 255 ------GTHGYIAPE---LAYTMVLTEKCDVYSFGVVALEVLMGRHP---GDLLSSVNPK 302
T Y PE L + EK D+++ G + + +HP G L VN K
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK 265
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
Query: 97 IGTGGYG-SVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG+G +G + S + VA+K + E E+ + E +RH NIV+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEK---IDENVKREIINHRSLRHPNIVRFKEV 83
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
L + ++ +Y G LF + N A R + + + +SY H +
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHA---MQVC 137
Query: 216 HRDISSNNILLNS----KLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLT 271
HRD+ N LL+ +L+ + + +LHS + GT YIAPE+
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKD---TVGTPAYIAPEVLLKKEYD 194
Query: 272 EK-CDVYSFGVVALEVLMGRHP 292
K DV+S GV +L+G +P
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYP 216
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 47/234 (20%)
Query: 91 FDIKYCIGTGGYGSVYRAQLPSGKKV-ALKKLHHSETELAFLESFQTEAHLLSQIRHRNI 149
++I++ IGTG YG V A K+V A+KK+ +L + E +L+++ H ++
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHV 114
Query: 150 VKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI----VKSMAHAL-- 203
VK+ + K + K+ L+ +L D + + V + +K++ + L
Sbjct: 115 VKVLDIVIPKD----VEKF---DELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLV 167
Query: 204 --SYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLL------------------ 243
Y+H I+HRD+ N L+N V DFG+AR +
Sbjct: 168 GVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 244 -------HSDSSNRTVVAG--THGYIAPELAYTMV-LTEKCDVYSFGVVALEVL 287
H+ + R + T Y APEL TE DV+S G + E+L
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 86/202 (42%), Gaps = 18/202 (8%)
Query: 97 IGTGGYG-SVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGF 155
IG+G +G + S + VA+K + E E+ + E +RH NIV+
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEK---IDENVKREIINHRSLRHPNIVRFKEV 83
Query: 156 CLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIV 215
L + ++ +Y G LF + N A R + + + +SY H +
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICN---AGRFSEDEARFFFQQLISGVSYCHA---MQVC 137
Query: 216 HRDISSNNILLNS----KLEAFVADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLT 271
HRD+ N LL+ +L+ + + +LHS + GT YIAPE+
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKS---TVGTPAYIAPEVLLKKEYD 194
Query: 272 EK-CDVYSFGVVALEVLMGRHP 292
K DV+S GV +L+G +P
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYP 216
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 33/265 (12%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRN--IVKLYG 154
IG+GG V++ + A+K ++ E + L+S++ E L++++ + I++LY
Sbjct: 64 IGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYD 123
Query: 155 FCLHKKCMFLIYKYMRRGS--LFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIP 212
+ + + ++++ M G+ L L+ + +D +R + K+M A+ +H
Sbjct: 124 YEITDQYIYMV---MECGNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH--- 174
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVARLLHSDSSN--RTVVAGTHGYIAPELAYTMVL 270
IVH D+ N L+ + + DFG+A + D+++ + G Y+ PE M
Sbjct: 175 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSS 233
Query: 271 TEK-----------CDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDD 319
+ + DV+S G + + G+ P + + K+ I + + P
Sbjct: 234 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIP 293
Query: 320 QTVIQDIILVSKIVFACLRSKPTSR 344
+ +QD++ CL+ P R
Sbjct: 294 EKDLQDVLK------CCLKRDPKQR 312
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 112 SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHK--KCMFLIYKYM 169
+G+ VA+K L +Q E +L + H +IVK G C + K + L+ +Y+
Sbjct: 36 TGEMVAVKALKEG-CGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 94
Query: 170 RRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSK 229
GSL L + + + + + ++YLH +HR +++ N+LL++
Sbjct: 95 PLGSLRDYLPRHCVGL----AQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDND 147
Query: 230 LEAFVADFGVARLL---HSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEV 286
+ DFG+A+ + H R + APE DV+SFGV E+
Sbjct: 148 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 207
Query: 287 L 287
L
Sbjct: 208 L 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 112 SGKKVALKKLHHSETELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHK--KCMFLIYKYM 169
+G+ VA+K L +Q E +L + H +IVK G C + K + L+ +Y+
Sbjct: 37 TGEMVAVKALKEG-CGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYV 95
Query: 170 RRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSK 229
GSL L + + + + + ++YLH +HR +++ N+LL++
Sbjct: 96 PLGSLRDYLPRHCVGL----AQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDND 148
Query: 230 LEAFVADFGVARLL---HSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEV 286
+ DFG+A+ + H R + APE DV+SFGV E+
Sbjct: 149 RLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYEL 208
Query: 287 L 287
L
Sbjct: 209 L 209
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 22/172 (12%)
Query: 137 EAHLLSQIR-HRNIVKLYGFCLHKKCMFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNI 195
E +L Q + HRN+++L F + +L+++ MR GS IL + + + + +
Sbjct: 60 EVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEASVV 116
Query: 196 VKSMAHALSYLHCDCIPSIVHRDISSNNILL---NSKLEAFVADFGVAR--LLHSDSSNR 250
V+ +A AL +LH I HRD+ NIL N + DFG+ L+ D S
Sbjct: 117 VQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPI 173
Query: 251 T-----VVAGTHGYIAPELAYTM-----VLTEKCDVYSFGVVALEVLMGRHP 292
+ G+ Y+APE+ + ++CD++S GV+ +L G P
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 91 FDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI-RHRN 148
++I IG G +G V +A + VA+K + + + AFL Q E LL + +H
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDT 112
Query: 149 IVKLYGFCLHKKCMF-----LIYKYMRRGSLFCILRNDD-EAIRLDWTKRVNIVKSMAHA 202
+K Y L + MF L+++ M +L+ +LRN + + L+ T++ + M A
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRK--FAQQMCTA 169
Query: 203 LSYLHCDCIPSIVHRDISSNNILL-NSKLEAF-VADFG----VARLLHSDSSNRTVVAGT 256
L +L + SI+H D+ NILL N K A + DFG + + ++ +R
Sbjct: 170 LLFLATPEL-SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF----- 223
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGD-LLSSVN 300
Y +PE+ M D++S G + +E+ H G+ L S N
Sbjct: 224 --YRSPEVLLGMPYDLAIDMWSLGCILVEM----HTGEPLFSGAN 262
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 213 SIVHRDISSNNILLNSKLEAFVADFGVA-RLLHSDSSNRTVVAGTHGYIAPELAYTMVLT 271
++HRD+ +NILL+ + + + DFG++ RL+ + +R+ AG Y+APE T
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPDPT 202
Query: 272 E-----KCDVYSFGVVALEVLMGRHP 292
+ + DV+S G+ +E+ G+ P
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 91 FDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI-RHRN 148
++I IG G +G V +A + VA+K + + + AFL Q E LL + +H
Sbjct: 37 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDT 93
Query: 149 IVKLYGFCLHKKCMF-----LIYKYMRRGSLFCILRNDD-EAIRLDWTKRVNIVKSMAHA 202
+K Y L + MF L+++ M +L+ +LRN + + L+ T++ + M A
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRK--FAQQMCTA 150
Query: 203 LSYLHCDCIPSIVHRDISSNNILL-NSKLEAF-VADFG----VARLLHSDSSNRTVVAGT 256
L +L + SI+H D+ NILL N K A + DFG + + ++ +R
Sbjct: 151 LLFLATPEL-SIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRF----- 204
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGD-LLSSVN 300
Y +PE+ M D++S G + +E+ H G+ L S N
Sbjct: 205 --YRSPEVLLGMPYDLAIDMWSLGCILVEM----HTGEPLFSGAN 243
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 106/225 (47%), Gaps = 33/225 (14%)
Query: 91 FDIKYCIGTGGYGSVYRA-QLPSGKKVALKKLHHSETELAFLESFQTEAHLLSQI-RHRN 148
++I IG G +G V +A + VA+K + + + AFL Q E LL + +H
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK---AFLNQAQIEVRLLELMNKHDT 112
Query: 149 IVKLYGFCLHKKCMF-----LIYKYMRRGSLFCILRNDD-EAIRLDWTKRVNIVKSMAHA 202
+K Y L + MF L+++ M +L+ +LRN + + L+ T++ + M A
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRK--FAQQMCTA 169
Query: 203 LSYLHCDCIPSIVHRDISSNNILL-NSKLEAF-VADFG----VARLLHSDSSNRTVVAGT 256
L +L + SI+H D+ NILL N K A + DFG + + ++ +R
Sbjct: 170 LLFLATPEL-SIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRF----- 223
Query: 257 HGYIAPELAYTMVLTEKCDVYSFGVVALEVLMGRHPGD-LLSSVN 300
Y +PE+ M D++S G + +E+ H G+ L S N
Sbjct: 224 --YRSPEVLLGMPYDLAIDMWSLGCILVEM----HTGEPLFSGAN 262
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 97 IGTGGYGSVYRAQLPSGKKVALKKLHHSETELAFLE-SFQTEAHLLSQIRHRNIVKLYGF 155
+G G G+V G+ VA+K++ ++A +E TE+ H N+++ Y
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD-----DHPNVIRYYCS 77
Query: 156 CLHKKCMFLIYKY--MRRGSLFCILRNDDEAIRLDWTKR-VNIVKSMAHALSYLHCDCIP 212
+ +++ + + L DE ++L +++++ +A +++LH
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---L 134
Query: 213 SIVHRDISSNNILLNS-------------KLEAFVADFGVARLLHSDS----SNRTVVAG 255
I+HRD+ NIL+++ L ++DFG+ + L S N +G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 194
Query: 256 THGYIAPE-------LAYTMVLTEKCDVYSFGVVALEVL-MGRHP-GD 294
T G+ APE L LT D++S G V +L G+HP GD
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD 242
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 90/218 (41%), Gaps = 19/218 (8%)
Query: 105 VYRAQLPSGKKVALKKLHHSET---ELAFLESFQTEAHLLSQIRHRNIVKLYGFCLHKKC 161
VY A+ +++ KL SET + F Q EA +++ ++V ++ F
Sbjct: 50 VYEAEDTVRERIVALKLX-SETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQ 108
Query: 162 MFLIYKYMRRGSLFCILRNDDEAIRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISS 221
+++ + + L LR L + V IV+ + S L HRD+
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGP---LAPPRAVAIVRQIG---SALDAAHAAGATHRDVKP 162
Query: 222 NNILLNSKLEAFVADFGVARLLHSDS-SNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFG 280
NIL+++ A++ DFG+A + + GT Y APE T + D+Y+
Sbjct: 163 ENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALT 222
Query: 281 VVALEVLMGRHP--GDLLSSVNPKIMLIDLLDQRVPSP 316
V E L G P GD LS I +Q +P P
Sbjct: 223 CVLYECLTGSPPYQGDQLSVXGAHI------NQAIPRP 254
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 8/133 (6%)
Query: 215 VHRDISSNNILLNSKLEAFVADFGVARLLHS--DSSNRTVVAGTHGYIAPELAYTMVLTE 272
+HRD+++ NILL+ + DFG+AR ++ D + ++APE + + +
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 273 KCDVYSFGVVALEVLMGRHPGDLLSSVNPKIMLIDLLDQRVPSPIDDQTVIQDIILVSKI 332
K DV+S+GV+ E+ L S P + + + R+ + + + +I
Sbjct: 281 KSDVWSYGVLLWEIF------SLGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQI 334
Query: 333 VFACLRSKPTSRP 345
+ C P RP
Sbjct: 335 MLDCWHRDPKERP 347
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 20/171 (11%)
Query: 131 LESFQTEAHLLSQIRHRNIVKLYGFC--LHKKCMFLIYKYMRRGSLFCILR----NDDEA 184
+E E +L ++ H N+VKL ++ ++++++ + +G + + ++D+A
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 185 IRLDWTKRVNIVKSMAHALSYLHCDCIPSIVHRDISSNNILLNSKLEAFVADFGVARLLH 244
R + + + + YLH I+HRDI +N+L+ +ADFGV+
Sbjct: 140 -RFYF-------QDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK 188
Query: 245 SDSSNRTVVAGTHGYIAPE-LAYT--MVLTEKCDVYSFGVVALEVLMGRHP 292
+ + GT ++APE L+ T + + DV++ GV + G+ P
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 48/115 (41%), Gaps = 25/115 (21%)
Query: 194 NIVKSMAHALSYLHCDCIPSIVHRDISSNNIL-LNSKLEAF------------------V 234
++ + HAL +LH + + H D+ NIL +NS+ E V
Sbjct: 127 HMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV 183
Query: 235 ADFGVARLLHSDSSNRTVVAGTHGYIAPELAYTMVLTEKCDVYSFGVVALEVLMG 289
ADFG A D + T + T Y PE+ + + CDV+S G + E G
Sbjct: 184 ADFGSATF---DHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,114,502
Number of Sequences: 62578
Number of extensions: 388265
Number of successful extensions: 3704
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 268
Number of HSP's that attempted gapping in prelim test: 1245
Number of HSP's gapped (non-prelim): 1131
length of query: 363
length of database: 14,973,337
effective HSP length: 100
effective length of query: 263
effective length of database: 8,715,537
effective search space: 2292186231
effective search space used: 2292186231
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.6 bits)