Query 046085
Match_columns 230
No_of_seqs 39 out of 41
Neff 3.1
Searched_HMMs 29240
Date Mon Mar 25 14:51:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046085.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046085hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qip_A Protein of unknown func 99.3 1.2E-11 4.2E-16 99.4 7.9 81 106-188 66-156 (165)
2 1paa_A Yeast transcription fac 97.0 0.00011 3.7E-09 40.6 0.1 27 31-59 2-28 (30)
3 2elr_A Zinc finger protein 406 96.9 0.00042 1.4E-08 39.9 1.8 28 28-58 6-33 (36)
4 2epx_A Zinc finger protein 28 96.7 0.00039 1.3E-08 42.5 1.1 32 27-60 8-39 (47)
5 1rim_A E6APC2 peptide; E6-bind 96.7 0.00057 2E-08 39.7 1.7 28 31-61 2-29 (33)
6 1znf_A 31ST zinc finger from X 96.7 0.00041 1.4E-08 37.4 0.9 22 31-54 1-22 (27)
7 2els_A Zinc finger protein 406 96.7 0.00047 1.6E-08 40.0 1.0 29 27-58 5-33 (36)
8 2m0f_A Zinc finger and BTB dom 96.6 0.0006 2.1E-08 36.9 1.2 26 31-59 2-27 (29)
9 2elq_A Zinc finger protein 406 96.6 0.00059 2E-08 39.6 1.2 30 27-59 5-34 (36)
10 2m0e_A Zinc finger and BTB dom 96.6 0.00072 2.5E-08 36.4 1.5 27 30-59 1-27 (29)
11 1njq_A Superman protein; zinc- 96.6 0.00047 1.6E-08 40.9 0.7 30 28-60 3-32 (39)
12 3iuf_A Zinc finger protein UBI 96.6 0.00058 2E-08 43.2 1.2 34 28-63 4-37 (48)
13 1ard_A Yeast transcription fac 96.6 0.00065 2.2E-08 36.9 1.2 26 30-58 1-26 (29)
14 2en3_A ZFP-95, zinc finger pro 96.6 0.001 3.5E-08 40.6 2.2 31 27-60 8-38 (46)
15 2lvt_A Zinc finger and BTB dom 95.6 0.00034 1.2E-08 38.5 0.0 27 31-60 2-28 (29)
16 2elt_A Zinc finger protein 406 96.6 0.00069 2.4E-08 39.0 1.2 29 28-59 6-34 (36)
17 1rik_A E6APC1 peptide; E6-bind 96.6 0.00047 1.6E-08 37.6 0.4 25 31-58 2-26 (29)
18 1srk_A Zinc finger protein ZFP 96.6 0.00066 2.2E-08 39.0 1.1 28 28-58 4-31 (35)
19 1p7a_A BF3, BKLF, kruppel-like 96.5 0.0018 6.1E-08 37.5 2.7 27 28-57 8-34 (37)
20 2eps_A POZ-, at HOOK-, and zin 96.5 0.0006 2E-08 43.7 0.7 31 28-60 9-39 (54)
21 2elv_A Zinc finger protein 406 96.5 0.00068 2.3E-08 39.3 0.8 28 28-58 6-33 (36)
22 2lvr_A Zinc finger and BTB dom 95.5 0.00047 1.6E-08 37.8 0.0 28 30-60 2-29 (30)
23 2elx_A Zinc finger protein 406 96.4 0.00097 3.3E-08 38.0 1.4 29 28-59 4-32 (35)
24 2elp_A Zinc finger protein 406 96.4 0.0012 4.2E-08 38.4 1.8 29 28-59 6-35 (37)
25 2m0d_A Zinc finger and BTB dom 96.4 0.0014 4.9E-08 35.5 1.9 26 30-58 2-27 (30)
26 2kvh_A Zinc finger and BTB dom 96.4 0.0016 5.4E-08 35.4 2.1 23 30-54 2-24 (27)
27 2enf_A Zinc finger protein 347 96.4 0.0011 3.7E-08 40.5 1.5 31 27-60 8-38 (46)
28 2emz_A ZFP-95, zinc finger pro 96.4 0.0024 8.1E-08 39.1 3.0 31 27-60 8-38 (46)
29 2eoz_A Zinc finger protein 473 96.4 0.00085 2.9E-08 41.1 0.9 31 27-60 8-38 (46)
30 2yte_A Zinc finger protein 473 96.4 0.0013 4.4E-08 39.2 1.7 30 27-59 6-35 (42)
31 2en2_A B-cell lymphoma 6 prote 96.4 0.00097 3.3E-08 39.9 1.1 31 27-60 7-37 (42)
32 2lvu_A Zinc finger and BTB dom 95.4 0.00057 1.9E-08 36.9 0.0 22 31-54 2-23 (26)
33 2ytt_A Zinc finger protein 473 96.4 0.0018 6.1E-08 39.7 2.3 31 27-60 8-38 (46)
34 2eov_A Zinc finger protein 484 96.4 0.0014 4.8E-08 39.9 1.8 30 27-59 8-37 (46)
35 2eoo_A ZFP-95, zinc finger pro 96.3 0.0016 5.4E-08 39.9 2.0 31 27-60 8-38 (46)
36 2en9_A Zinc finger protein 28 96.3 0.0016 5.4E-08 39.9 1.9 31 27-60 8-38 (46)
37 2eor_A Zinc finger protein 224 96.3 0.0015 5.1E-08 39.8 1.6 31 27-60 8-38 (46)
38 1klr_A Zinc finger Y-chromosom 96.3 0.0027 9.3E-08 34.3 2.6 23 31-55 2-24 (30)
39 2eom_A ZFP-95, zinc finger pro 96.3 0.0016 5.5E-08 40.0 1.7 31 27-60 8-38 (46)
40 2en7_A Zinc finger protein 268 96.3 0.0012 4E-08 39.7 1.0 31 27-60 8-38 (44)
41 2eou_A Zinc finger protein 473 96.2 0.002 6.9E-08 39.0 2.0 31 27-60 8-38 (44)
42 2yti_A Zinc finger protein 347 96.2 0.0012 4.3E-08 40.2 1.0 31 27-60 8-38 (46)
43 2lv2_A Insulinoma-associated p 96.2 0.00095 3.2E-08 48.7 0.6 32 27-60 52-83 (85)
44 2emj_A Zinc finger protein 28 96.2 0.0016 5.4E-08 39.9 1.5 31 27-60 8-38 (46)
45 2eoh_A Zinc finger protein 28 96.2 0.0015 5.1E-08 40.0 1.4 31 27-60 8-38 (46)
46 2ytm_A Zinc finger protein 28 96.2 0.0024 8.1E-08 39.2 2.3 31 27-60 8-38 (46)
47 2elm_A Zinc finger protein 406 96.2 0.0019 6.6E-08 38.0 1.8 29 28-58 6-34 (37)
48 2emh_A Zinc finger protein 484 96.2 0.0018 6.1E-08 39.5 1.7 31 27-60 8-38 (46)
49 2kvg_A Zinc finger and BTB dom 96.2 0.0014 4.8E-08 36.0 1.1 23 30-54 2-24 (27)
50 2eoq_A Zinc finger protein 224 96.2 0.0018 6.1E-08 39.5 1.7 31 27-60 8-38 (46)
51 2ytn_A Zinc finger protein 347 96.2 0.0013 4.5E-08 40.1 1.0 31 27-60 8-38 (46)
52 2emg_A Zinc finger protein 484 96.2 0.0014 4.7E-08 40.1 1.1 30 27-59 8-37 (46)
53 2ytr_A Zinc finger protein 347 96.2 0.0016 5.4E-08 39.6 1.4 31 27-60 8-38 (46)
54 2epc_A Zinc finger protein 32; 96.2 0.0014 4.7E-08 39.0 1.0 30 27-59 7-36 (42)
55 2kvf_A Zinc finger and BTB dom 96.2 0.0017 5.9E-08 35.3 1.4 23 30-54 2-24 (28)
56 2yth_A Zinc finger protein 224 96.2 0.0016 5.4E-08 39.9 1.3 31 27-60 8-38 (46)
57 2emi_A Zinc finger protein 484 96.2 0.0013 4.3E-08 40.2 0.9 31 27-60 8-38 (46)
58 2em6_A Zinc finger protein 224 96.2 0.0015 5E-08 40.1 1.2 31 27-60 8-38 (46)
59 2adr_A ADR1; transcription reg 96.1 0.0016 5.4E-08 41.6 1.2 31 27-59 26-56 (60)
60 2em4_A Zinc finger protein 28 96.1 0.0016 5.4E-08 39.9 1.2 31 27-60 8-38 (46)
61 2eq4_A Zinc finger protein 224 96.1 0.0019 6.4E-08 39.3 1.5 31 27-60 8-38 (46)
62 2ep1_A Zinc finger protein 484 96.1 0.0017 5.8E-08 39.5 1.3 31 27-60 8-38 (46)
63 2epv_A Zinc finger protein 268 96.1 0.0014 4.9E-08 39.9 0.9 31 27-60 8-38 (44)
64 2ytk_A Zinc finger protein 347 96.1 0.0017 5.6E-08 39.7 1.2 31 27-60 8-38 (46)
65 2elo_A Zinc finger protein 406 96.1 0.003 1E-07 36.5 2.3 29 28-59 6-34 (37)
66 1yui_A GAGA-factor; complex (D 96.1 0.002 6.7E-08 41.1 1.6 30 28-60 21-50 (54)
67 2epz_A Zinc finger protein 28 96.1 0.0016 5.6E-08 39.7 1.2 31 27-60 8-38 (46)
68 2yrm_A B-cell lymphoma 6 prote 96.1 0.0027 9.2E-08 38.6 2.1 31 27-60 6-36 (43)
69 2yu8_A Zinc finger protein 347 96.1 0.0017 5.7E-08 39.7 1.2 31 27-60 8-38 (46)
70 2epu_A Zinc finger protein 32; 96.1 0.001 3.6E-08 40.6 0.2 31 27-60 8-38 (45)
71 2enh_A Zinc finger protein 28 96.1 0.0015 5.1E-08 40.0 0.9 31 27-60 8-38 (46)
72 2elz_A Zinc finger protein 224 96.1 0.0018 6.1E-08 39.7 1.2 30 27-59 8-37 (46)
73 2eq1_A Zinc finger protein 347 96.1 0.0014 4.9E-08 40.0 0.7 31 27-60 8-38 (46)
74 2yto_A Zinc finger protein 484 96.1 0.0018 6.3E-08 39.6 1.2 31 27-60 8-38 (46)
75 2emm_A ZFP-95, zinc finger pro 96.1 0.0017 5.9E-08 39.4 1.1 30 27-59 8-37 (46)
76 2emk_A Zinc finger protein 28 96.1 0.0024 8.2E-08 39.1 1.7 31 27-60 8-38 (46)
77 2eow_A Zinc finger protein 347 96.1 0.0017 5.9E-08 39.5 1.0 31 27-60 8-38 (46)
78 2d9h_A Zinc finger protein 692 96.0 0.0019 6.5E-08 43.4 1.3 31 29-61 36-66 (78)
79 2ytj_A Zinc finger protein 484 96.0 0.0018 6.1E-08 39.5 1.0 31 27-60 8-38 (46)
80 2eon_A ZFP-95, zinc finger pro 96.0 0.0016 5.5E-08 40.0 0.8 31 27-60 8-38 (46)
81 2em7_A Zinc finger protein 224 96.0 0.0016 5.6E-08 39.7 0.8 31 27-60 8-38 (46)
82 2ely_A Zinc finger protein 224 96.0 0.0025 8.5E-08 39.0 1.7 31 27-60 8-38 (46)
83 2eoj_A Zinc finger protein 268 96.0 0.0014 4.8E-08 39.5 0.5 30 27-59 8-37 (44)
84 2em3_A Zinc finger protein 28 96.0 0.0019 6.5E-08 39.4 1.0 31 27-60 8-38 (46)
85 2emx_A Zinc finger protein 268 96.0 0.0022 7.7E-08 38.7 1.4 31 27-60 6-36 (44)
86 2eq0_A Zinc finger protein 347 96.0 0.0013 4.6E-08 40.1 0.3 31 27-60 8-38 (46)
87 2el6_A Zinc finger protein 268 96.0 0.0018 6.2E-08 39.6 0.9 31 27-60 8-38 (46)
88 2eoe_A Zinc finger protein 347 96.0 0.0019 6.5E-08 39.3 0.9 31 27-60 8-38 (46)
89 2em5_A ZFP-95, zinc finger pro 96.0 0.0015 5.1E-08 40.0 0.4 31 27-60 8-38 (46)
90 2ytd_A Zinc finger protein 473 96.0 0.0022 7.6E-08 39.1 1.2 31 27-60 8-38 (46)
91 2eme_A Zinc finger protein 473 95.9 0.0018 6.3E-08 39.3 0.8 30 27-59 8-37 (46)
92 2emy_A Zinc finger protein 268 95.9 0.0025 8.6E-08 38.8 1.5 31 27-60 8-38 (46)
93 2em8_A Zinc finger protein 224 95.9 0.0027 9.1E-08 38.9 1.6 31 27-60 8-38 (46)
94 2eof_A Zinc finger protein 268 95.9 0.0025 8.5E-08 38.2 1.4 31 27-60 8-38 (44)
95 2drp_A Protein (tramtrack DNA- 95.9 0.0039 1.3E-07 40.4 2.5 28 28-57 37-64 (66)
96 2ct1_A Transcriptional repress 95.9 0.0036 1.2E-07 42.1 2.3 31 27-59 11-41 (77)
97 2ept_A Zinc finger protein 32; 95.9 0.0013 4.5E-08 39.2 0.1 30 27-59 6-35 (41)
98 2eop_A Zinc finger protein 268 95.9 0.0026 9.1E-08 38.6 1.5 31 27-60 8-38 (46)
99 2ep2_A Zinc finger protein 484 95.9 0.0019 6.6E-08 39.4 0.8 31 27-60 8-38 (46)
100 2ep0_A Zinc finger protein 28 95.9 0.0017 5.7E-08 39.7 0.5 31 27-60 8-38 (46)
101 3uk3_C Zinc finger protein 217 95.9 0.0037 1.3E-07 39.3 2.2 27 29-57 30-56 (57)
102 2enc_A Zinc finger protein 224 95.9 0.002 6.8E-08 39.3 0.9 31 27-60 8-38 (46)
103 2eq2_A Zinc finger protein 347 95.9 0.0021 7.1E-08 39.2 0.9 31 27-60 8-38 (46)
104 2emp_A Zinc finger protein 347 95.9 0.0028 9.6E-08 38.6 1.6 31 27-60 8-38 (46)
105 2yso_A ZFP-95, zinc finger pro 95.9 0.0023 7.9E-08 39.0 1.1 29 27-58 8-36 (46)
106 2ep3_A Zinc finger protein 484 95.9 0.0021 7.1E-08 39.2 0.8 31 27-60 8-38 (46)
107 2em9_A Zinc finger protein 224 95.9 0.0019 6.4E-08 39.3 0.6 31 27-60 8-38 (46)
108 2ema_A Zinc finger protein 347 95.9 0.0022 7.4E-08 39.1 0.9 31 27-60 8-38 (46)
109 2ytq_A Zinc finger protein 268 95.9 0.0024 8.1E-08 39.1 1.1 31 27-60 8-38 (46)
110 2eox_A Zinc finger protein 473 95.9 0.0015 5.2E-08 39.5 0.2 30 27-59 8-37 (44)
111 2ytp_A Zinc finger protein 484 95.8 0.0017 5.9E-08 39.7 0.4 31 27-60 8-38 (46)
112 2yt9_A Zinc finger-containing 95.8 0.0047 1.6E-07 42.4 2.6 29 29-59 63-91 (95)
113 2em0_A Zinc finger protein 224 95.8 0.0022 7.6E-08 39.1 0.8 31 27-60 8-38 (46)
114 2em2_A Zinc finger protein 28 95.8 0.0025 8.4E-08 39.0 1.0 31 27-60 8-38 (46)
115 2ene_A Zinc finger protein 347 95.8 0.0018 6.1E-08 39.5 0.3 30 27-59 8-37 (46)
116 2eml_A Zinc finger protein 28 95.8 0.0025 8.6E-08 38.8 1.0 31 27-60 8-38 (46)
117 2yts_A Zinc finger protein 484 95.8 0.0019 6.6E-08 39.2 0.4 31 27-60 8-38 (46)
118 2emb_A Zinc finger protein 473 95.8 0.0017 5.8E-08 39.3 0.2 30 27-59 8-37 (44)
119 2emf_A Zinc finger protein 484 95.8 0.0017 5.7E-08 39.8 0.1 30 27-59 8-37 (46)
120 2el5_A Zinc finger protein 268 95.8 0.0025 8.4E-08 38.0 0.8 30 27-59 6-35 (42)
121 2yrj_A Zinc finger protein 473 95.7 0.0022 7.4E-08 39.0 0.5 31 27-60 8-38 (46)
122 2ytf_A Zinc finger protein 268 95.7 0.0025 8.6E-08 38.7 0.7 30 27-59 8-37 (46)
123 2yu5_A Zinc finger protein 473 95.7 0.0061 2.1E-07 36.7 2.4 30 27-59 8-37 (44)
124 2en6_A Zinc finger protein 268 95.6 0.0029 9.9E-08 38.6 0.8 30 27-59 8-37 (46)
125 1zfd_A SWI5; DNA binding motif 95.6 0.0043 1.5E-07 34.8 1.5 26 30-58 2-29 (32)
126 2kfq_A FP1; protein, de novo p 95.6 0.00028 9.7E-09 40.6 -3.7 27 31-60 2-28 (32)
127 2en8_A Zinc finger protein 224 95.6 0.0026 8.9E-08 38.6 0.5 31 27-60 8-38 (46)
128 1va1_A Transcription factor SP 95.5 0.006 2.1E-07 35.8 2.0 30 28-60 5-36 (37)
129 2eos_A B-cell lymphoma 6 prote 95.5 0.0074 2.5E-07 36.0 2.4 29 27-58 7-35 (42)
130 1fv5_A First zinc finger of U- 95.5 0.0066 2.3E-07 38.3 2.1 28 24-53 1-28 (36)
131 2eoy_A Zinc finger protein 473 95.5 0.0029 1E-07 38.7 0.4 30 27-59 8-37 (46)
132 2epr_A POZ-, at HOOK-, and zin 95.4 0.0025 8.5E-08 39.6 -0.1 30 27-59 8-37 (48)
133 2epq_A POZ-, at HOOK-, and zin 95.4 0.0047 1.6E-07 37.6 1.2 30 28-60 7-36 (45)
134 2ytg_A ZFP-95, zinc finger pro 95.4 0.0027 9.3E-08 38.7 0.0 30 27-59 8-37 (46)
135 2epw_A Zinc finger protein 268 95.4 0.009 3.1E-07 36.2 2.4 31 27-60 8-38 (46)
136 2dlq_A GLI-kruppel family memb 95.3 0.007 2.4E-07 43.0 2.1 27 30-58 93-119 (124)
137 1x3c_A Zinc finger protein 292 95.3 0.0063 2.1E-07 45.4 1.9 34 26-61 22-57 (73)
138 2drp_A Protein (tramtrack DNA- 95.3 0.0051 1.8E-07 39.9 1.2 28 28-57 7-34 (66)
139 2el4_A Zinc finger protein 268 95.3 0.0033 1.1E-07 38.2 0.3 30 27-59 8-37 (46)
140 2ct1_A Transcriptional repress 95.3 0.0072 2.5E-07 40.6 1.9 28 30-59 44-71 (77)
141 2en1_A Zinc finger protein 224 95.3 0.0034 1.1E-07 38.3 0.2 30 27-59 8-37 (46)
142 3uk3_C Zinc finger protein 217 95.2 0.007 2.4E-07 38.0 1.5 28 29-59 2-29 (57)
143 2eq3_A Zinc finger protein 347 95.2 0.0077 2.6E-07 36.5 1.7 30 27-59 8-37 (46)
144 2ytb_A Zinc finger protein 32; 95.2 0.0085 2.9E-07 35.5 1.8 29 27-58 7-35 (42)
145 1bhi_A CRE-BP1, ATF-2; CRE bin 95.1 0.011 3.6E-07 34.5 2.1 29 29-60 4-34 (38)
146 1a1h_A QGSR zinc finger peptid 95.1 0.007 2.4E-07 40.9 1.4 23 30-54 33-55 (90)
147 4gzn_C ZFP-57, zinc finger pro 95.1 0.0076 2.6E-07 41.3 1.5 22 30-53 31-52 (60)
148 2lv2_A Insulinoma-associated p 95.0 0.01 3.5E-07 43.2 2.1 32 24-58 21-52 (85)
149 2epp_A POZ-, at HOOK-, and zin 95.0 0.018 6.2E-07 40.6 3.3 35 23-60 5-39 (66)
150 2ysp_A Zinc finger protein 224 94.9 0.009 3.1E-07 36.3 1.4 30 27-59 8-37 (46)
151 4gzn_C ZFP-57, zinc finger pro 94.9 0.0045 1.5E-07 42.4 -0.1 30 29-61 2-31 (60)
152 1x5w_A Zinc finger protein 64, 94.9 0.015 5.2E-07 38.3 2.5 28 28-57 34-61 (70)
153 3jy6_A Transcriptional regulat 94.9 0.12 4E-06 41.6 8.2 68 104-176 27-94 (276)
154 1x5w_A Zinc finger protein 64, 94.7 0.013 4.4E-07 38.6 1.9 30 27-59 5-34 (70)
155 2lce_A B-cell lymphoma 6 prote 94.7 0.0088 3E-07 39.8 1.1 23 29-53 15-37 (74)
156 1sp2_A SP1F2; zinc finger, tra 94.7 0.014 4.7E-07 32.5 1.7 25 31-58 2-28 (31)
157 1bbo_A Human enhancer-binding 94.7 0.018 6.1E-07 36.1 2.4 25 31-58 1-25 (57)
158 1x6h_A Transcriptional repress 94.7 0.015 5.2E-07 38.9 2.2 30 27-58 11-40 (86)
159 1wjp_A Zinc finger protein 295 94.5 0.015 5.1E-07 41.2 2.0 28 29-58 67-94 (107)
160 2dmi_A Teashirt homolog 3; zin 94.5 0.023 7.9E-07 40.4 2.9 29 28-58 77-105 (115)
161 2eln_A Zinc finger protein 406 94.5 0.025 8.4E-07 35.6 2.7 29 27-58 5-35 (38)
162 2adr_A ADR1; transcription reg 94.4 0.019 6.6E-07 36.4 2.0 26 31-59 2-27 (60)
163 2ctd_A Zinc finger protein 512 94.3 0.024 8.3E-07 41.0 2.7 28 29-58 60-87 (96)
164 3l6u_A ABC-type sugar transpor 94.3 0.17 5.9E-06 40.5 8.0 71 104-177 28-99 (293)
165 3o74_A Fructose transport syst 94.3 0.1 3.4E-06 41.4 6.4 71 104-177 22-92 (272)
166 3gbv_A Putative LACI-family tr 94.2 0.082 2.8E-06 42.4 5.9 74 104-177 29-104 (304)
167 2csh_A Zinc finger protein 297 94.2 0.04 1.4E-06 38.9 3.5 30 28-59 62-91 (110)
168 1bbo_A Human enhancer-binding 94.1 0.018 6.2E-07 36.0 1.5 26 27-54 25-50 (57)
169 3m9w_A D-xylose-binding peripl 94.1 0.21 7.3E-06 40.8 8.2 71 104-177 22-93 (313)
170 2gqj_A Zinc finger protein KIA 94.1 0.018 6E-07 41.0 1.5 26 30-57 53-78 (98)
171 2ab3_A ZNF29; zinc finger prot 94.0 0.016 5.5E-07 31.1 0.9 22 31-54 2-25 (29)
172 3tb6_A Arabinose metabolism tr 94.0 0.23 8E-06 39.6 8.1 70 104-176 35-108 (298)
173 1x6e_A Zinc finger protein 24; 93.9 0.029 1E-06 37.2 2.4 24 29-54 40-63 (72)
174 3l49_A ABC sugar (ribose) tran 93.9 0.17 6E-06 40.5 7.2 71 104-177 25-96 (291)
175 2cot_A Zinc finger protein 435 93.8 0.011 3.8E-07 39.6 0.1 23 29-53 44-66 (77)
176 3ksm_A ABC-type sugar transpor 93.8 0.18 6.1E-06 39.9 7.0 73 104-177 20-94 (276)
177 2ebt_A Krueppel-like factor 5; 93.8 0.042 1.4E-06 37.7 2.9 25 28-54 72-96 (100)
178 2gqj_A Zinc finger protein KIA 93.8 0.061 2.1E-06 38.1 3.9 30 27-59 20-50 (98)
179 3h75_A Periplasmic sugar-bindi 93.8 0.21 7.2E-06 41.7 7.7 72 104-177 24-96 (350)
180 1x6f_A Zinc finger protein 462 93.7 0.042 1.4E-06 39.7 3.0 33 27-62 21-53 (88)
181 2d9h_A Zinc finger protein 692 93.7 0.039 1.3E-06 36.9 2.5 30 27-59 3-32 (78)
182 2lce_A B-cell lymphoma 6 prote 93.6 0.051 1.7E-06 36.0 3.1 32 26-60 40-71 (74)
183 3k4h_A Putative transcriptiona 93.6 0.18 6.2E-06 40.4 6.9 69 104-176 33-101 (292)
184 2fn9_A Ribose ABC transporter, 93.6 0.3 1E-05 39.2 8.2 70 104-176 22-92 (290)
185 8abp_A L-arabinose-binding pro 93.6 0.28 9.6E-06 39.6 8.0 68 104-175 22-90 (306)
186 1f2i_G Fusion of N-terminal 17 93.6 0.025 8.6E-07 37.2 1.5 24 29-54 47-70 (73)
187 2ee8_A Protein ODD-skipped-rel 93.6 0.027 9.1E-07 39.4 1.7 23 29-53 71-93 (106)
188 2ghf_A ZHX1, zinc fingers and 93.6 0.033 1.1E-06 41.7 2.3 29 27-57 14-42 (102)
189 1x6e_A Zinc finger protein 24; 93.6 0.038 1.3E-06 36.6 2.3 30 26-58 9-38 (72)
190 3huu_A Transcription regulator 93.5 0.18 6.2E-06 41.2 6.8 69 104-176 47-115 (305)
191 1gud_A ALBP, D-allose-binding 93.5 0.2 6.9E-06 40.7 7.1 70 104-176 21-93 (288)
192 3g1w_A Sugar ABC transporter; 93.5 0.29 1E-05 39.6 8.0 72 104-177 24-96 (305)
193 1x6h_A Transcriptional repress 93.5 0.029 1E-06 37.5 1.7 26 29-56 45-70 (86)
194 3uug_A Multiple sugar-binding 93.5 0.3 1E-05 40.0 8.0 71 104-177 23-94 (330)
195 2ghf_A ZHX1, zinc fingers and 93.4 0.018 6.3E-07 43.1 0.7 32 28-61 47-78 (102)
196 2kmk_A Zinc finger protein GFI 93.4 0.039 1.3E-06 36.4 2.2 25 28-54 54-78 (82)
197 2dri_A D-ribose-binding protei 93.4 0.29 1E-05 39.2 7.8 70 104-176 21-91 (271)
198 3hcw_A Maltose operon transcri 93.3 0.29 9.9E-06 39.9 7.6 70 104-177 32-101 (295)
199 3dbi_A Sugar-binding transcrip 93.2 0.37 1.3E-05 40.1 8.3 70 104-176 83-152 (338)
200 1llm_C Chimera of ZIF23-GCN4; 93.2 0.051 1.7E-06 37.2 2.6 29 28-58 28-56 (88)
201 3sho_A Transcriptional regulat 93.0 0.43 1.5E-05 37.0 7.9 74 106-186 57-133 (187)
202 2dlk_A Novel protein; ZF-C2H2 92.9 0.04 1.4E-06 36.5 1.7 28 28-58 35-64 (79)
203 1llm_C Chimera of ZIF23-GCN4; 92.9 0.034 1.2E-06 38.1 1.3 28 30-60 2-29 (88)
204 2fep_A Catabolite control prot 92.8 0.37 1.3E-05 39.1 7.7 69 104-176 36-104 (289)
205 2vk2_A YTFQ, ABC transporter p 92.8 0.29 9.8E-06 40.0 7.0 70 104-176 22-92 (306)
206 1wjp_A Zinc finger protein 295 92.8 0.085 2.9E-06 37.2 3.3 28 27-57 12-39 (107)
207 1tjy_A Sugar transport protein 92.7 0.43 1.5E-05 39.6 8.0 70 104-176 23-94 (316)
208 1ncs_A Peptide M30F, transcrip 92.6 0.025 8.5E-07 35.1 0.3 30 28-60 15-46 (47)
209 3d8u_A PURR transcriptional re 92.6 0.37 1.3E-05 38.3 7.1 69 104-176 23-91 (275)
210 2wbt_A B-129; zinc finger; 2.7 92.6 0.068 2.3E-06 38.8 2.6 24 29-54 72-95 (129)
211 2rgy_A Transcriptional regulat 92.5 0.33 1.1E-05 39.3 7.0 69 104-176 28-99 (290)
212 2h3h_A Sugar ABC transporter, 92.5 0.35 1.2E-05 39.7 7.0 70 104-176 20-91 (313)
213 2lt7_A Transcriptional regulat 92.4 0.051 1.8E-06 41.7 1.9 28 29-58 76-103 (133)
214 2ioy_A Periplasmic sugar-bindi 92.4 0.44 1.5E-05 38.5 7.5 70 104-176 21-91 (283)
215 2lt7_A Transcriptional regulat 92.4 0.032 1.1E-06 42.9 0.7 31 27-60 18-48 (133)
216 3egc_A Putative ribose operon 92.3 0.17 5.9E-06 40.8 4.9 70 104-177 28-97 (291)
217 2fvy_A D-galactose-binding per 92.2 0.4 1.4E-05 38.6 7.0 70 104-176 22-93 (309)
218 1f2i_G Fusion of N-terminal 17 92.1 0.065 2.2E-06 35.2 1.9 34 23-59 11-46 (73)
219 2dmd_A Zinc finger protein 64, 92.1 0.043 1.5E-06 37.5 1.0 25 29-55 34-58 (96)
220 2yt9_A Zinc finger-containing 92.1 0.076 2.6E-06 36.2 2.2 26 28-55 32-57 (95)
221 2kmk_A Zinc finger protein GFI 92.1 0.085 2.9E-06 34.7 2.4 26 28-55 26-51 (82)
222 3e3m_A Transcriptional regulat 92.0 0.61 2.1E-05 39.3 8.2 69 104-176 90-158 (355)
223 2cot_A Zinc finger protein 435 92.0 0.077 2.6E-06 35.4 2.2 29 27-58 14-42 (77)
224 2dlk_A Novel protein; ZF-C2H2 91.9 0.061 2.1E-06 35.6 1.6 31 28-60 4-36 (79)
225 3brq_A HTH-type transcriptiona 91.9 0.76 2.6E-05 36.6 8.2 69 104-176 41-110 (296)
226 3rot_A ABC sugar transporter, 91.8 0.38 1.3E-05 39.1 6.5 73 104-177 23-96 (297)
227 2dmi_A Teashirt homolog 3; zin 91.8 0.089 3E-06 37.3 2.4 27 27-55 15-41 (115)
228 3kke_A LACI family transcripti 91.7 0.4 1.4E-05 39.2 6.6 70 104-177 35-104 (303)
229 2eod_A TNF receptor-associated 91.6 0.064 2.2E-06 35.1 1.4 26 27-55 6-31 (66)
230 1zr9_A Zinc finger protein 593 91.6 0.064 2.2E-06 43.0 1.6 32 29-62 48-79 (124)
231 3gv0_A Transcriptional regulat 91.5 0.51 1.7E-05 38.2 6.9 69 104-176 30-98 (288)
232 3kjx_A Transcriptional regulat 91.4 0.56 1.9E-05 39.2 7.3 68 105-176 89-156 (344)
233 2ej4_A Zinc finger protein ZIC 91.4 0.2 7E-06 34.1 3.8 25 32-59 63-87 (95)
234 2rjo_A Twin-arginine transloca 91.3 0.47 1.6E-05 39.3 6.6 70 104-176 25-97 (332)
235 2wbs_A Krueppel-like factor 4; 91.3 0.065 2.2E-06 36.0 1.2 23 29-53 63-85 (89)
236 2ee8_A Protein ODD-skipped-rel 91.3 0.13 4.6E-06 35.7 2.9 25 28-54 14-38 (106)
237 3h5o_A Transcriptional regulat 91.1 0.63 2.2E-05 38.8 7.3 69 104-176 82-150 (339)
238 2j7j_A Transcription factor II 90.9 0.085 2.9E-06 34.8 1.4 24 29-54 29-54 (85)
239 2dlq_A GLI-kruppel family memb 90.9 0.28 9.4E-06 34.6 4.2 23 29-53 64-86 (124)
240 1a1h_A QGSR zinc finger peptid 90.8 0.13 4.6E-06 34.5 2.4 31 27-60 58-88 (90)
241 2dmd_A Zinc finger protein 64, 90.6 0.11 3.6E-06 35.5 1.8 26 27-54 4-29 (96)
242 3mjh_B Early endosome antigen 90.6 0.094 3.2E-06 33.9 1.4 30 29-60 3-32 (34)
243 3e61_A Putative transcriptiona 90.6 0.6 2E-05 37.2 6.4 68 104-177 28-96 (277)
244 3d02_A Putative LACI-type tran 90.6 0.66 2.2E-05 37.3 6.7 70 104-176 24-95 (303)
245 2eod_A TNF receptor-associated 90.5 0.15 5.2E-06 33.3 2.4 28 27-57 32-60 (66)
246 3c3k_A Alanine racemase; struc 90.2 0.69 2.4E-05 37.3 6.6 68 104-176 28-95 (285)
247 2o20_A Catabolite control prot 90.2 0.88 3E-05 37.8 7.4 69 104-176 83-151 (332)
248 2x7x_A Sensor protein; transfe 90.2 0.94 3.2E-05 37.5 7.5 70 104-176 25-96 (325)
249 3o1i_D Periplasmic protein TOR 90.2 0.24 8.1E-06 39.8 3.8 71 104-176 25-96 (304)
250 3bbl_A Regulatory protein of L 90.2 0.37 1.3E-05 39.0 4.9 69 104-176 28-96 (287)
251 2ctd_A Zinc finger protein 512 90.1 0.15 5.1E-06 36.8 2.3 27 28-57 31-58 (96)
252 1jx6_A LUXP protein; protein-l 90.1 0.5 1.7E-05 39.1 5.8 71 105-176 65-137 (342)
253 2iks_A DNA-binding transcripti 90.1 0.41 1.4E-05 38.7 5.1 70 104-176 40-109 (293)
254 2wbt_A B-129; zinc finger; 2.7 90.0 0.12 4.3E-06 37.4 1.8 26 30-57 99-124 (129)
255 2i13_A AART; DNA binding, zinc 89.8 0.097 3.3E-06 40.3 1.2 28 28-58 130-157 (190)
256 3bil_A Probable LACI-family tr 89.7 0.86 2.9E-05 38.5 7.0 69 104-176 86-154 (348)
257 3brs_A Periplasmic binding pro 89.6 0.77 2.6E-05 36.7 6.3 72 104-176 27-99 (289)
258 2gli_A Protein (five-finger GL 89.5 0.15 5.1E-06 37.7 1.9 31 28-60 94-126 (155)
259 3qk7_A Transcriptional regulat 89.5 0.38 1.3E-05 39.1 4.5 68 104-176 30-97 (294)
260 2l69_A Rossmann 2X3 fold prote 89.4 0.8 2.7E-05 36.8 6.2 65 107-176 19-84 (134)
261 2l82_A Designed protein OR32; 89.4 1.4 4.6E-05 36.3 7.7 69 108-180 46-116 (162)
262 2jp9_A Wilms tumor 1; DNA bind 89.3 0.2 6.8E-06 35.2 2.4 24 29-54 64-87 (119)
263 3clk_A Transcription regulator 89.3 0.38 1.3E-05 38.9 4.3 69 104-176 28-97 (290)
264 2gli_A Protein (five-finger GL 89.3 0.11 3.8E-06 38.3 1.1 30 28-60 64-95 (155)
265 2hsg_A Glucose-resistance amyl 89.1 0.83 2.8E-05 37.8 6.4 69 104-176 80-148 (332)
266 3k9c_A Transcriptional regulat 89.1 0.75 2.6E-05 37.3 6.0 67 104-176 31-97 (289)
267 2ent_A Krueppel-like factor 15 88.9 0.18 6E-06 30.4 1.6 29 27-58 8-38 (48)
268 2csh_A Zinc finger protein 297 88.8 0.14 4.9E-06 36.0 1.4 27 28-57 34-60 (110)
269 2rpc_A Zinc finger protein ZIC 88.7 0.23 7.9E-06 36.9 2.4 31 28-60 22-52 (155)
270 1dbq_A Purine repressor; trans 88.6 1.8 6.2E-05 34.5 7.8 69 104-176 27-96 (289)
271 1ubd_C Protein (YY1 zinc finge 88.2 0.18 6.3E-06 35.9 1.6 23 29-53 60-84 (124)
272 2epa_A Krueppel-like factor 10 88.2 0.22 7.4E-06 32.6 1.8 26 27-54 43-70 (72)
273 1tk9_A Phosphoheptose isomeras 87.8 0.5 1.7E-05 36.6 3.9 44 143-186 110-156 (188)
274 2j7j_A Transcription factor II 87.8 0.31 1.1E-05 32.1 2.4 26 31-58 1-28 (85)
275 2epa_A Krueppel-like factor 10 87.5 0.19 6.4E-06 32.9 1.2 29 28-59 14-44 (72)
276 2xbl_A Phosphoheptose isomeras 87.5 0.88 3E-05 35.4 5.2 44 143-186 116-162 (198)
277 2ej4_A Zinc finger protein ZIC 87.0 0.46 1.6E-05 32.3 3.0 28 31-60 25-52 (95)
278 2jp9_A Wilms tumor 1; DNA bind 86.9 0.37 1.2E-05 33.8 2.5 24 29-54 4-29 (119)
279 3l8h_A Putative haloacid dehal 86.8 3.2 0.00011 31.1 7.8 94 105-198 34-154 (179)
280 2rpc_A Zinc finger protein ZIC 86.4 0.13 4.3E-06 38.3 -0.2 22 30-53 89-112 (155)
281 1m3s_A Hypothetical protein YC 86.0 1.6 5.6E-05 33.8 6.0 68 106-186 55-125 (186)
282 1vd4_A Transcription initiatio 85.9 0.11 3.8E-06 34.1 -0.6 28 27-60 10-37 (62)
283 3miz_A Putative transcriptiona 85.9 0.27 9.4E-06 39.9 1.6 68 104-176 34-101 (301)
284 2i13_A AART; DNA binding, zinc 85.5 0.42 1.4E-05 36.7 2.4 28 29-58 103-130 (190)
285 2h0a_A TTHA0807, transcription 85.3 0.33 1.1E-05 38.5 1.8 70 104-177 19-88 (276)
286 1tf6_A Protein (transcription 84.6 0.4 1.4E-05 36.8 1.9 24 29-54 132-157 (190)
287 2i2w_A Phosphoheptose isomeras 84.4 0.98 3.4E-05 36.4 4.2 75 110-186 92-177 (212)
288 3hs3_A Ribose operon repressor 84.3 0.53 1.8E-05 38.0 2.6 64 104-176 30-94 (277)
289 2wbs_A Krueppel-like factor 4; 84.0 0.38 1.3E-05 32.1 1.4 25 28-54 2-28 (89)
290 2e72_A POGO transposable eleme 83.9 0.57 1.9E-05 32.7 2.2 24 29-54 10-33 (49)
291 1jeo_A MJ1247, hypothetical pr 83.9 1.4 4.7E-05 34.0 4.7 67 106-186 58-127 (180)
292 3mmz_A Putative HAD family hyd 83.6 2.6 8.7E-05 32.7 6.2 72 106-186 47-122 (176)
293 2qv7_A Diacylglycerol kinase D 83.3 1.6 5.3E-05 37.9 5.3 73 111-186 25-98 (337)
294 1x92_A APC5045, phosphoheptose 82.8 1.7 5.7E-05 34.2 4.9 44 143-186 113-162 (199)
295 1ubd_C Protein (YY1 zinc finge 82.6 0.46 1.6E-05 33.8 1.4 21 31-53 5-27 (124)
296 1tf6_A Protein (transcription 82.6 0.51 1.7E-05 36.3 1.7 27 29-57 70-98 (190)
297 1vim_A Hypothetical protein AF 82.6 1.6 5.6E-05 34.9 4.8 68 106-186 65-135 (200)
298 1qpz_A PURA, protein (purine n 82.2 4.2 0.00014 33.8 7.3 69 104-176 78-147 (340)
299 1zw8_A Zinc-responsive transcr 82.2 1.4 4.7E-05 30.3 3.6 40 16-57 19-64 (64)
300 2xhz_A KDSD, YRBH, arabinose 5 82.2 1.7 6E-05 33.4 4.7 73 106-186 67-142 (183)
301 2ctu_A Zinc finger protein 483 82.2 0.087 3E-06 33.9 -2.4 27 29-58 37-63 (73)
302 3trj_A Phosphoheptose isomeras 82.1 1.6 5.6E-05 35.3 4.7 44 143-186 114-163 (201)
303 3fxa_A SIS domain protein; str 81.5 1.3 4.3E-05 35.1 3.7 73 106-186 63-138 (201)
304 3ic5_A Putative saccharopine d 81.4 4.5 0.00015 27.9 6.2 72 103-176 17-102 (118)
305 2yva_A DNAA initiator-associat 81.2 2 7E-05 33.5 4.8 44 143-186 109-158 (196)
306 1pea_A Amidase operon; gene re 80.7 2.3 7.9E-05 35.8 5.2 68 106-176 160-233 (385)
307 2ebt_A Krueppel-like factor 5; 80.3 1 3.4E-05 30.6 2.4 26 27-54 11-38 (100)
308 2wm8_A MDP-1, magnesium-depend 80.1 8.4 0.00029 29.4 7.9 83 106-197 76-172 (187)
309 3etn_A Putative phosphosugar i 79.3 2.6 8.9E-05 34.4 5.0 73 106-186 77-154 (220)
310 2qu7_A Putative transcriptiona 78.8 1.7 5.9E-05 34.8 3.7 67 104-176 27-93 (288)
311 1jye_A Lactose operon represso 78.4 4.7 0.00016 33.8 6.5 71 104-176 81-151 (349)
312 2pln_A HP1043, response regula 78.4 9.6 0.00033 26.7 7.2 63 104-177 32-96 (137)
313 4evq_A Putative ABC transporte 78.4 1.6 5.3E-05 36.1 3.4 69 105-176 170-239 (375)
314 3sm9_A Mglur3, metabotropic gl 76.3 4.3 0.00015 36.5 5.9 69 106-176 205-276 (479)
315 3td9_A Branched chain amino ac 76.2 1.3 4.4E-05 36.8 2.3 69 105-176 169-237 (366)
316 3e8m_A Acylneuraminate cytidyl 76.0 5.6 0.00019 29.5 5.6 73 106-186 39-115 (164)
317 2eps_A POZ-, at HOOK-, and zin 75.9 1.1 3.8E-05 28.1 1.5 18 27-46 37-54 (54)
318 2bon_A Lipid kinase; DAG kinas 75.6 4.9 0.00017 34.8 5.9 71 110-186 29-100 (332)
319 1usg_A Leucine-specific bindin 75.5 2.1 7.2E-05 34.8 3.4 67 106-175 158-225 (346)
320 1wcw_A Uroporphyrinogen III sy 75.2 0.99 3.4E-05 37.0 1.4 77 104-183 144-231 (261)
321 2hqb_A Transcriptional activat 74.8 5.9 0.0002 33.0 6.0 67 105-176 28-96 (296)
322 3h5t_A Transcriptional regulat 74.4 3 0.0001 35.0 4.2 67 105-176 94-160 (366)
323 3ij5_A 3-deoxy-D-manno-octulos 73.6 5.8 0.0002 32.3 5.6 72 106-186 84-160 (211)
324 1byk_A Protein (trehalose oper 73.5 4.4 0.00015 31.8 4.7 66 104-176 22-88 (255)
325 3jvd_A Transcriptional regulat 73.4 2.3 8E-05 35.6 3.2 62 104-176 84-145 (333)
326 3ipc_A ABC transporter, substr 73.3 1.8 6.3E-05 35.6 2.5 36 141-176 191-226 (356)
327 3gyb_A Transcriptional regulat 73.1 1.4 4.7E-05 35.1 1.7 65 104-177 25-89 (280)
328 3n07_A 3-deoxy-D-manno-octulos 72.9 7.2 0.00025 31.3 5.9 71 108-186 62-136 (195)
329 3lkb_A Probable branched-chain 72.8 2.2 7.4E-05 35.9 2.9 69 105-176 162-231 (392)
330 2e4u_A Metabotropic glutamate 72.6 5.3 0.00018 36.2 5.6 68 107-176 207-277 (555)
331 3s40_A Diacylglycerol kinase; 72.4 5.2 0.00018 34.2 5.2 73 110-186 8-81 (304)
332 3i09_A Periplasmic branched-ch 72.0 2.9 0.0001 34.8 3.5 68 106-176 160-230 (375)
333 3eaf_A ABC transporter, substr 71.8 3.7 0.00013 34.6 4.1 68 106-176 162-232 (391)
334 3rag_A Uncharacterized protein 71.6 6.4 0.00022 34.5 5.7 49 138-186 4-65 (242)
335 1y80_A Predicted cobalamin bin 71.6 15 0.00051 29.5 7.6 64 106-176 108-179 (210)
336 3sc6_A DTDP-4-dehydrorhamnose 71.5 3.3 0.00011 33.3 3.6 73 102-176 17-107 (287)
337 3lop_A Substrate binding perip 70.9 1.7 5.7E-05 36.2 1.7 36 141-176 194-229 (364)
338 3p6l_A Sugar phosphate isomera 70.8 6.3 0.00022 31.6 5.1 66 106-172 68-133 (262)
339 2zj3_A Glucosamine--fructose-6 70.5 5.1 0.00017 35.5 4.9 42 145-186 109-153 (375)
340 2yj3_A Copper-transporting ATP 73.1 0.9 3.1E-05 37.6 0.0 85 105-196 143-229 (263)
341 1rku_A Homoserine kinase; phos 70.2 21 0.0007 26.8 7.6 75 104-186 75-165 (206)
342 3ewi_A N-acylneuraminate cytid 70.2 6.3 0.00021 31.2 4.9 70 108-186 46-119 (168)
343 2fqx_A Membrane lipoprotein TM 70.1 14 0.00047 31.1 7.3 66 105-176 28-95 (318)
344 3hut_A Putative branched-chain 70.0 1.7 5.8E-05 35.8 1.6 36 141-176 192-227 (358)
345 1jr2_A Uroporphyrinogen-III sy 69.7 1.1 3.7E-05 37.8 0.4 77 104-183 170-255 (286)
346 2jvx_A NF-kappa-B essential mo 69.7 2.1 7E-05 26.5 1.6 21 34-55 5-25 (28)
347 1nri_A Hypothetical protein HI 69.4 5.5 0.00019 34.4 4.8 44 143-186 140-186 (306)
348 1j5x_A Glucosamine-6-phosphate 69.3 5 0.00017 35.0 4.5 72 106-186 70-146 (342)
349 2a3n_A Putative glucosamine-fr 69.2 5.9 0.0002 34.6 5.0 42 145-186 104-148 (355)
350 3sg0_A Extracellular ligand-bi 68.4 3.9 0.00013 33.6 3.5 69 105-176 178-247 (386)
351 2zay_A Response regulator rece 67.8 25 0.00085 24.8 7.3 86 102-196 20-117 (147)
352 1lko_A Rubrerythrin all-iron(I 67.8 2.4 8.3E-05 34.9 2.1 34 5-39 127-162 (191)
353 4eyg_A Twin-arginine transloca 67.5 3.5 0.00012 33.9 3.0 67 106-175 159-229 (368)
354 1y81_A Conserved hypothetical 67.5 13 0.00045 28.6 6.1 36 138-177 89-124 (138)
355 3lmz_A Putative sugar isomeras 66.8 12 0.00041 30.1 6.0 66 106-172 66-131 (257)
356 3d8t_A Uroporphyrinogen-III sy 66.6 3.1 0.00011 35.0 2.6 77 104-183 169-256 (286)
357 3ctp_A Periplasmic binding pro 66.3 8.2 0.00028 31.9 5.0 66 104-177 80-145 (330)
358 3n1u_A Hydrolase, HAD superfam 66.2 13 0.00044 29.2 6.0 72 107-186 55-130 (191)
359 3a1c_A Probable copper-exporti 65.9 14 0.0005 30.3 6.5 79 105-191 170-250 (287)
360 3g85_A Transcriptional regulat 65.8 0.96 3.3E-05 36.2 -0.7 70 104-177 32-101 (289)
361 3cvj_A Putative phosphoheptose 65.6 3.3 0.00011 33.8 2.5 43 144-186 109-165 (243)
362 2yxb_A Coenzyme B12-dependent 65.4 14 0.00049 29.2 6.1 64 106-176 38-108 (161)
363 3snr_A Extracellular ligand-bi 65.4 3.6 0.00012 33.5 2.6 69 105-176 154-223 (362)
364 2poc_A D-fructose-6- PH, isome 65.2 7.7 0.00026 34.1 4.9 42 145-186 99-143 (367)
365 3saj_A Glutamate receptor 1; r 65.2 5.5 0.00019 33.8 3.8 65 108-175 149-218 (384)
366 3ibs_A Conserved hypothetical 65.1 6.5 0.00022 30.6 4.0 35 143-177 111-149 (218)
367 1l7m_A Phosphoserine phosphata 65.0 21 0.00073 26.2 6.6 76 104-186 82-179 (211)
368 1vlj_A NADH-dependent butanol 64.9 8.3 0.00028 34.6 5.2 79 106-184 34-119 (407)
369 3m2p_A UDP-N-acetylglucosamine 64.8 4.5 0.00016 33.1 3.2 70 102-174 14-108 (311)
370 3gt7_A Sensor protein; structu 64.8 34 0.0012 24.7 7.6 84 104-196 21-116 (154)
371 3mn1_A Probable YRBI family ph 64.7 13 0.00045 28.9 5.7 73 106-186 54-130 (189)
372 2hoq_A Putative HAD-hydrolase 64.7 46 0.0016 25.6 9.2 88 104-196 100-202 (241)
373 3j08_A COPA, copper-exporting 64.6 14 0.00047 35.4 6.9 72 107-186 466-538 (645)
374 3rfu_A Copper efflux ATPase; a 64.4 9.2 0.00031 37.6 5.8 73 107-186 563-636 (736)
375 3o21_A Glutamate receptor 3; p 63.8 12 0.00042 32.0 5.8 65 108-175 151-221 (389)
376 3eua_A Putative fructose-amino 63.5 8.6 0.00029 33.4 4.9 42 145-186 76-120 (329)
377 3pwf_A Rubrerythrin; non heme 63.2 5.1 0.00017 32.8 3.2 33 6-39 113-145 (170)
378 3hgm_A Universal stress protei 63.2 30 0.001 24.6 7.0 48 130-177 70-120 (147)
379 3kbb_A Phosphorylated carbohyd 62.5 28 0.00095 26.2 7.0 38 89-126 74-112 (216)
380 3tsa_A SPNG, NDP-rhamnosyltran 62.4 25 0.00084 29.4 7.3 42 132-176 103-144 (391)
381 3cs3_A Sugar-binding transcrip 62.4 6.2 0.00021 31.5 3.5 62 104-176 28-89 (277)
382 2aml_A SIS domain protein; 469 62.3 8 0.00027 34.2 4.5 42 145-186 99-144 (373)
383 2d9k_A FLN29 gene product; zin 62.0 0.88 3E-05 31.4 -1.4 25 26-53 12-36 (75)
384 4ex6_A ALNB; modified rossman 61.9 49 0.0017 25.0 8.7 88 104-196 110-211 (237)
385 4hqf_A Thrombospondin-related 61.6 17 0.00057 30.1 6.1 42 145-186 130-179 (281)
386 3skx_A Copper-exporting P-type 61.5 20 0.00069 28.0 6.3 82 106-195 152-235 (280)
387 3i45_A Twin-arginine transloca 61.5 11 0.00039 31.5 5.1 68 106-176 162-234 (387)
388 3cg4_A Response regulator rece 61.4 29 0.001 24.1 6.6 84 104-196 21-116 (142)
389 3g68_A Putative phosphosugar i 60.5 11 0.00037 33.2 5.0 43 144-186 83-128 (352)
390 4f11_A Gamma-aminobutyric acid 60.4 6.5 0.00022 33.6 3.5 59 107-170 175-233 (433)
391 2d9k_A FLN29 gene product; zin 60.3 4.7 0.00016 27.6 2.1 32 25-60 37-68 (75)
392 3o9x_A Uncharacterized HTH-typ 60.3 16 0.00054 27.1 5.2 53 31-84 35-95 (133)
393 3c85_A Putative glutathione-re 60.2 4 0.00014 31.3 2.0 64 104-167 52-130 (183)
394 4g84_A Histidine--tRNA ligase, 60.1 8.3 0.00028 34.4 4.2 58 117-176 369-427 (464)
395 2hsz_A Novel predicted phospha 60.0 32 0.0011 27.0 7.2 84 105-193 121-218 (243)
396 1shu_X Anthrax toxin receptor 60.0 23 0.0008 26.4 6.2 44 143-186 103-155 (182)
397 1tq8_A Hypothetical protein RV 59.8 33 0.0011 25.9 7.1 51 133-183 84-135 (163)
398 2qxy_A Response regulator; reg 59.7 41 0.0014 23.4 7.7 65 104-177 18-85 (142)
399 2djr_A Zinc finger BED domain- 59.7 7.4 0.00025 28.6 3.2 33 30-63 26-65 (76)
400 3fkj_A Putative phosphosugar i 59.5 10 0.00035 33.4 4.6 47 145-191 91-143 (347)
401 3knz_A Putative sugar binding 59.2 12 0.0004 33.4 5.0 44 143-186 97-143 (366)
402 1atz_A VON willebrand factor; 59.0 18 0.00062 27.7 5.5 41 146-186 111-157 (189)
403 2xw6_A MGS, methylglyoxal synt 58.9 21 0.00071 28.5 6.0 63 105-171 39-109 (134)
404 2d59_A Hypothetical protein PH 58.9 21 0.00071 27.5 5.8 38 136-177 95-132 (144)
405 1dp4_A Atrial natriuretic pept 58.8 11 0.00036 32.1 4.5 60 106-169 171-232 (435)
406 2qr3_A Two-component system re 58.8 27 0.00093 24.2 6.0 64 104-176 17-89 (140)
407 3hba_A Putative phosphosugar i 58.3 12 0.00043 32.7 5.0 42 145-186 92-136 (334)
408 2ydy_A Methionine adenosyltran 58.3 8.9 0.0003 31.2 3.8 75 102-176 14-111 (315)
409 4es6_A Uroporphyrinogen-III sy 58.3 1.7 5.9E-05 35.7 -0.5 78 106-184 148-230 (254)
410 3llv_A Exopolyphosphatase-rela 58.3 11 0.00036 27.6 3.9 71 103-173 18-101 (141)
411 3m1y_A Phosphoserine phosphata 58.1 37 0.0013 25.3 7.0 86 98-190 74-183 (217)
412 3lub_A Putative creatinine ami 58.1 28 0.00097 29.8 7.1 74 96-174 66-145 (254)
413 3n0w_A ABC branched chain amin 57.6 5.6 0.00019 33.3 2.5 68 106-176 162-233 (379)
414 2hi0_A Putative phosphoglycola 57.6 44 0.0015 25.9 7.6 83 106-194 118-214 (240)
415 1o97_C Electron transferring f 57.4 32 0.0011 29.6 7.3 82 107-193 46-143 (264)
416 2b2x_A Integrin alpha-1; compu 57.3 8.6 0.00029 30.5 3.5 33 144-176 125-162 (223)
417 2r8e_A 3-deoxy-D-manno-octulos 56.7 28 0.00094 26.9 6.2 72 106-186 61-137 (188)
418 3ddh_A Putative haloacid dehal 56.2 57 0.002 24.0 9.5 88 104-196 111-213 (234)
419 1vl0_A DTDP-4-dehydrorhamnose 56.1 10 0.00035 30.5 3.8 73 102-176 24-114 (292)
420 4hqo_A Sporozoite surface prot 55.6 25 0.00087 29.0 6.2 42 145-186 127-176 (266)
421 2p9j_A Hypothetical protein AQ 55.5 43 0.0015 24.5 6.9 21 106-126 44-64 (162)
422 1moq_A Glucosamine 6-phosphate 55.4 12 0.00042 32.7 4.4 42 145-186 101-146 (368)
423 2hqr_A Putative transcriptiona 55.0 41 0.0014 25.8 7.0 82 104-196 14-104 (223)
424 1ccw_A Protein (glutamate muta 55.0 25 0.00087 26.9 5.7 64 106-176 23-93 (137)
425 4fe7_A Xylose operon regulator 55.0 9.1 0.00031 33.1 3.5 63 104-176 44-106 (412)
426 3fj1_A Putative phosphosugar i 54.9 15 0.0005 32.3 4.9 42 145-186 93-137 (344)
427 3fvv_A Uncharacterized protein 54.6 56 0.0019 24.8 7.6 75 105-186 99-198 (232)
428 2jsp_A Transcriptional regulat 54.4 5.5 0.00019 30.4 1.8 22 32-57 21-42 (87)
429 1efp_B ETF, protein (electron 54.1 43 0.0015 28.6 7.6 82 107-193 46-144 (252)
430 2rjn_A Response regulator rece 53.7 50 0.0017 23.5 6.9 65 104-177 21-89 (154)
431 3kzx_A HAD-superfamily hydrola 53.5 29 0.00098 26.3 5.7 73 106-185 111-196 (231)
432 3sd7_A Putative phosphatase; s 53.3 34 0.0012 26.1 6.2 88 105-197 117-219 (240)
433 2aef_A Calcium-gated potassium 53.0 22 0.00076 28.3 5.3 66 103-169 21-98 (234)
434 1vmd_A MGS, methylglyoxal synt 52.8 36 0.0012 28.6 6.7 63 105-171 63-133 (178)
435 3loq_A Universal stress protei 52.6 69 0.0024 25.9 8.3 68 114-183 200-267 (294)
436 1qkk_A DCTD, C4-dicarboxylate 52.4 21 0.00073 25.6 4.6 65 104-177 17-85 (155)
437 3lc0_A Histidyl-tRNA synthetas 52.2 29 0.00099 32.0 6.6 40 135-175 380-420 (456)
438 3grc_A Sensor protein, kinase; 52.2 56 0.0019 22.7 6.8 64 104-176 20-89 (140)
439 3j09_A COPA, copper-exporting 52.0 30 0.001 33.5 6.9 71 108-186 545-616 (723)
440 2elu_A Zinc finger protein 406 51.8 6.5 0.00022 25.8 1.5 24 34-58 11-34 (37)
441 3fwz_A Inner membrane protein 51.5 16 0.00055 27.1 4.0 28 103-130 19-46 (140)
442 3dqp_A Oxidoreductase YLBE; al 51.3 9.2 0.00031 29.7 2.7 73 102-176 12-107 (219)
443 2qh8_A Uncharacterized protein 51.1 27 0.00091 28.5 5.6 67 104-176 27-99 (302)
444 1b93_A Protein (methylglyoxal 51.1 23 0.00078 28.9 5.1 63 105-171 47-117 (152)
445 3s3t_A Nucleotide-binding prot 50.9 27 0.00094 24.9 5.0 48 134-181 73-122 (146)
446 2ct5_A Zinc finger BED domain 50.7 7.1 0.00024 28.4 1.8 32 31-63 28-62 (73)
447 2ah5_A COG0546: predicted phos 50.7 43 0.0015 25.5 6.4 83 106-194 92-186 (210)
448 3i42_A Response regulator rece 50.6 57 0.0019 22.2 6.9 84 104-196 17-111 (127)
449 1lss_A TRK system potassium up 50.4 63 0.0021 22.7 7.2 72 103-174 16-101 (140)
450 3cnb_A DNA-binding response re 50.0 60 0.002 22.3 6.9 84 104-196 22-119 (143)
451 3e48_A Putative nucleoside-dip 50.0 8 0.00027 31.2 2.2 69 103-173 13-103 (289)
452 3jx9_A Putative phosphoheptose 50.0 23 0.00078 29.0 5.0 45 142-186 76-125 (170)
453 3cg0_A Response regulator rece 49.9 60 0.0021 22.3 7.5 65 104-177 23-92 (140)
454 2nyv_A Pgpase, PGP, phosphogly 49.5 49 0.0017 25.4 6.6 82 106-194 91-188 (222)
455 1rrm_A Lactaldehyde reductase; 49.5 18 0.00061 31.9 4.5 78 106-184 22-106 (386)
456 1zu1_A DSRBP-ZFA, RNA binding 49.5 12 0.0004 28.9 3.0 34 21-59 25-59 (127)
457 3mw8_A Uroporphyrinogen-III sy 49.4 2 6.9E-05 34.9 -1.5 73 104-183 133-217 (240)
458 1k1e_A Deoxy-D-mannose-octulos 49.2 43 0.0015 25.5 6.2 21 106-126 43-63 (180)
459 1pt6_A Integrin alpha-1; cell 49.2 10 0.00035 29.7 2.7 33 144-176 110-147 (213)
460 2gm3_A Unknown protein; AT3G01 49.0 44 0.0015 24.9 6.1 47 135-181 92-138 (175)
461 3p6l_A Sugar phosphate isomera 49.0 66 0.0023 25.6 7.5 56 130-186 63-122 (262)
462 3oow_A Phosphoribosylaminoimid 48.7 30 0.001 28.9 5.6 59 126-184 15-77 (166)
463 3hv2_A Response regulator/HD d 48.4 71 0.0024 22.7 7.6 84 104-196 28-122 (153)
464 4fe3_A Cytosolic 5'-nucleotida 48.4 45 0.0015 27.5 6.6 29 97-125 139-168 (297)
465 4b4k_A N5-carboxyaminoimidazol 48.3 33 0.0011 29.2 5.8 58 126-183 32-93 (181)
466 1mjh_A Protein (ATP-binding do 47.8 37 0.0013 24.8 5.4 43 139-181 92-134 (162)
467 1xn7_A Hypothetical protein YH 47.6 6.4 0.00022 28.5 1.1 19 13-31 33-51 (78)
468 3ks9_A Mglur1, metabotropic gl 47.4 31 0.0011 31.0 5.9 70 106-177 217-293 (496)
469 3gi1_A LBP, laminin-binding pr 47.4 1.2E+02 0.004 26.0 9.3 89 81-174 157-258 (286)
470 2j48_A Two-component sensor ki 47.3 56 0.0019 21.3 6.8 83 105-196 16-107 (119)
471 3ar4_A Sarcoplasmic/endoplasmi 47.3 35 0.0012 34.2 6.7 34 153-186 682-716 (995)
472 1ijb_A VON willebrand factor; 47.2 21 0.00071 28.0 4.2 43 144-186 116-168 (202)
473 1zrn_A L-2-haloacid dehalogena 47.0 36 0.0012 25.7 5.4 81 105-193 102-199 (232)
474 3bvp_A INT, TP901-1 integrase; 46.9 27 0.00091 26.3 4.6 65 111-176 3-80 (138)
475 3h5i_A Response regulator/sens 46.8 72 0.0025 22.3 7.4 84 104-196 19-113 (140)
476 3ib6_A Uncharacterized protein 46.7 63 0.0022 24.6 6.8 21 105-125 41-61 (189)
477 3rsc_A CALG2; TDP, enediyne, s 46.5 77 0.0026 26.6 7.8 39 133-174 108-147 (415)
478 4g85_A Histidine-tRNA ligase, 46.5 18 0.00062 33.3 4.2 43 134-176 437-480 (517)
479 3n28_A Phosphoserine phosphata 46.5 62 0.0021 27.1 7.3 86 98-190 177-286 (335)
480 2rdm_A Response regulator rece 46.3 67 0.0023 21.8 7.7 64 104-176 19-88 (132)
481 3bfj_A 1,3-propanediol oxidore 46.3 14 0.00049 32.6 3.4 79 106-185 24-111 (387)
482 3ezx_A MMCP 1, monomethylamine 46.2 33 0.0011 28.4 5.4 64 106-176 112-185 (215)
483 2k02_A Ferrous iron transport 46.0 6.5 0.00022 29.3 1.0 19 12-30 32-50 (87)
484 3um9_A Haloacid dehalogenase, 45.5 39 0.0013 25.2 5.3 84 105-193 103-200 (230)
485 1efv_B Electron transfer flavo 45.5 43 0.0015 28.7 6.3 83 107-194 49-148 (255)
486 3tbf_A Glucosamine--fructose-6 45.3 19 0.00064 32.0 4.0 42 145-186 103-148 (372)
487 2gkg_A Response regulator homo 45.3 66 0.0022 21.5 6.8 61 104-173 19-86 (127)
488 4iin_A 3-ketoacyl-acyl carrier 45.3 47 0.0016 26.9 6.2 69 102-174 41-114 (271)
489 3tqd_A 3-deoxy-manno-octuloson 45.3 47 0.0016 27.9 6.3 52 129-183 34-85 (256)
490 1te2_A Putative phosphatase; s 44.9 89 0.003 22.9 8.5 85 105-194 101-199 (226)
491 2pr7_A Haloacid dehalogenase/e 44.8 37 0.0013 23.4 4.8 48 122-176 73-120 (137)
492 3re1_A Uroporphyrinogen-III sy 44.7 1.4 5E-05 36.9 -3.1 78 106-184 156-238 (269)
493 3eod_A Protein HNR; response r 44.6 72 0.0025 21.8 6.7 65 104-177 21-89 (130)
494 3e4c_A Caspase-1; zymogen, inf 44.6 8 0.00027 34.2 1.5 87 51-150 37-131 (302)
495 3dv9_A Beta-phosphoglucomutase 44.5 15 0.0005 27.9 2.8 86 105-196 115-216 (247)
496 3iru_A Phoshonoacetaldehyde hy 44.4 1E+02 0.0036 23.5 8.6 101 90-193 102-217 (277)
497 3tva_A Xylose isomerase domain 44.3 1E+02 0.0035 24.7 8.0 67 106-172 56-157 (290)
498 3c3j_A Putative tagatose-6-pho 44.2 23 0.00078 31.3 4.4 73 108-186 73-151 (384)
499 3s6j_A Hydrolase, haloacid deh 44.0 49 0.0017 24.6 5.6 85 105-196 98-198 (233)
500 3mc1_A Predicted phosphatase, 43.9 81 0.0028 23.4 6.9 88 105-197 93-194 (226)
No 1
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=99.25 E-value=1.2e-11 Score=99.39 Aligned_cols=81 Identities=23% Similarity=0.190 Sum_probs=69.4
Q ss_pred hhhhhhhhcEEEEEccc-------cchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHc-CCeEEEecCC-
Q 046085 106 LVVKLKRVWFWVRTMSD-------KLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLR-CLKTGVAGYM- 176 (230)
Q Consensus 106 La~eLrRAGv~VrtV~d-------KpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer-~l~TVVVGd~- 176 (230)
+...|++.||.|.+.|- ..+++|++|.-+|++.. ..+|++||||.|+||+++++.+|++ |.+++|+|-.
T Consensus 66 ~~~~L~~~g~~v~~~p~~~~~~~~~k~~~Dv~laiD~~~~a--~~~d~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~~ 143 (165)
T 2qip_A 66 FHHILRGVGFEVMLKPYIQRRDGSAKGDWDVGITLDAIEIA--PDVDRVILVSGDGDFSLLVERIQQRYNKKVTVYGVPR 143 (165)
T ss_dssp HHHHHHHHTCEEEECCCCCCSSCCCSCCCHHHHHHHHHHHG--GGCSEEEEECCCGGGHHHHHHHHHHHCCEEEEEECGG
T ss_pred HHHHHHHCCcEEEEEeeeeccCCccCCCccHHHHHHHHHhh--ccCCEEEEEECChhHHHHHHHHHHHcCcEEEEEeCCC
Confidence 44678888999886543 34699999999999986 5899999999999999999999998 9999999964
Q ss_pred -CCchhhhhhhcc
Q 046085 177 -NDGTLKRIADRL 188 (230)
Q Consensus 177 -~~~aL~r~AD~l 188 (230)
+..+|.+.||.|
T Consensus 144 ~~s~~L~~~ad~f 156 (165)
T 2qip_A 144 LTSQTLIDCADNF 156 (165)
T ss_dssp GSCHHHHHHSSEE
T ss_pred cChHHHHHhCCEE
Confidence 678899999943
No 2
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.01 E-value=0.00011 Score=40.60 Aligned_cols=27 Identities=22% Similarity=0.314 Sum_probs=23.9
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
|| .|..|| ..|.+...|..|...+|..
T Consensus 2 ~~-~C~~C~-k~f~~~~~l~~H~~~~H~~ 28 (30)
T 1paa_A 2 AY-ACGLCN-RAFTRRDLLIRHAQKIHSG 28 (30)
T ss_dssp CS-BCTTTC-CBCSSSHHHHHHHTTTSCC
T ss_pred Cc-CCcccC-cccCChHHHHHHHHHHccC
Confidence 79 999999 9999999999997667754
No 3
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.87 E-value=0.00042 Score=39.94 Aligned_cols=28 Identities=18% Similarity=0.246 Sum_probs=23.9
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
...|| .|.+|| ..|.+...|..|.+ +|.
T Consensus 6 ~~~~~-~C~~C~-k~f~~~~~l~~H~~-~H~ 33 (36)
T 2elr_A 6 SGKTH-LCDMCG-KKFKSKGTLKSHKL-LHT 33 (36)
T ss_dssp CCSSC-BCTTTC-CBCSSHHHHHHHHH-HHS
T ss_pred CCCCe-ecCcCC-CCcCchHHHHHHHH-Hhc
Confidence 45789 999999 99999999999964 564
No 4
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.75 E-value=0.00039 Score=42.47 Aligned_cols=32 Identities=28% Similarity=0.485 Sum_probs=27.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+.+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~~~H~~~ 39 (47)
T 2epx_A 8 TGKKPY-ECIECG-KAFIQNTSLIRHWRYYHTGE 39 (47)
T ss_dssp CCCCSB-CCSSSC-CCBSSHHHHHHHHTTTTTTS
T ss_pred CCCCCE-ECCccC-chhCChHHHHHHhHhhcCCC
Confidence 346799 999999 99999999999987677544
No 5
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=96.73 E-value=0.00057 Score=39.70 Aligned_cols=28 Identities=18% Similarity=0.240 Sum_probs=24.1
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhHHHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHKREQ 61 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHeREr 61 (230)
|| .|.+|| ..|.+...|..|.+ +|..|+
T Consensus 2 p~-~C~~C~-k~F~~~~~L~~H~~-~H~~~~ 29 (33)
T 1rim_A 2 KF-ACPECP-KRFMRSDHLSKHIT-LHELLG 29 (33)
T ss_dssp CC-CCSSSC-CCCSSHHHHHHHHH-HHTTTC
T ss_pred cc-cCCCCC-chhCCHHHHHHHHH-HhCCCC
Confidence 89 999999 99999999999964 676553
No 6
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=96.71 E-value=0.00041 Score=37.42 Aligned_cols=22 Identities=14% Similarity=0.153 Sum_probs=19.5
Q ss_pred CcccccccCCCcccCchHHHHHHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFk 54 (230)
|| .|..|| ..|.....|..|.+
T Consensus 1 ~~-~C~~C~-k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 1 XY-KCGLCE-RSFVEKSALSRHQR 22 (27)
T ss_dssp -C-BCSSSC-CBCSSHHHHHHHGG
T ss_pred Cc-cCCCCC-CcCCCHHHHHHHHH
Confidence 78 999999 99999999999964
No 7
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.67 E-value=0.00047 Score=39.99 Aligned_cols=29 Identities=14% Similarity=0.159 Sum_probs=24.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
.+..|| .|.+|| ..|.....|..|.+ +|.
T Consensus 5 ~~~k~~-~C~~C~-k~f~~~~~l~~H~~-~H~ 33 (36)
T 2els_A 5 SSGKIF-TCEYCN-KVFKFKHSLQAHLR-IHT 33 (36)
T ss_dssp SCCCCE-ECTTTC-CEESSHHHHHHHHH-HHC
T ss_pred CCCCCE-ECCCCC-ceeCCHHHHHHHHH-HhC
Confidence 356799 999999 99999999999965 564
No 8
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=96.63 E-value=0.0006 Score=36.90 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=22.5
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
|| .|..|| ..|.+...|..|.+ +|..
T Consensus 2 ~~-~C~~C~-k~f~~~~~l~~H~~-~H~~ 27 (29)
T 2m0f_A 2 PL-KCRECG-KQFTTSGNLKRHLR-IHSG 27 (29)
T ss_dssp CE-ECTTTS-CEESCHHHHHHHHH-HHHT
T ss_pred Cc-cCCCCC-CccCChhHHHHHHH-HhcC
Confidence 89 999999 99999999999964 5654
No 9
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.63 E-value=0.00059 Score=39.57 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=24.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.....|..|. .+|..
T Consensus 5 ~~~k~~-~C~~C~-k~f~~~~~l~~H~-~~H~~ 34 (36)
T 2elq_A 5 SSGKPF-KCSLCE-YATRSKSNLKAHM-NRHST 34 (36)
T ss_dssp CCCCSE-ECSSSS-CEESCHHHHHHHH-HHSST
T ss_pred CCCCCc-cCCCCC-chhCCHHHHHHHH-HHhcc
Confidence 346799 999999 9999999999996 45643
No 10
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=96.63 E-value=0.00072 Score=36.43 Aligned_cols=27 Identities=19% Similarity=0.126 Sum_probs=23.0
Q ss_pred CCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
.|| .|..|| ..|.....|..|-+ +|..
T Consensus 1 k~~-~C~~C~-~~f~~~~~l~~H~~-~h~~ 27 (29)
T 2m0e_A 1 KEH-KCPHCD-KKFNQVGNLKAHLK-IHIA 27 (29)
T ss_dssp CCC-CCSSCC-CCCCTTTHHHHHHH-HHHS
T ss_pred CCC-cCCCCC-cccCCHHHHHHHHH-Hhcc
Confidence 389 999999 99999999999974 5654
No 11
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=96.61 E-value=0.00047 Score=40.94 Aligned_cols=30 Identities=20% Similarity=0.419 Sum_probs=25.1
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
+..|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 3 ~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 32 (39)
T 1njq_A 3 PPRSY-TCSFCK-REFRSAQALGGHMN-VHRRD 32 (39)
T ss_dssp CSSSE-ECTTTC-CEESSHHHHHHHHH-TTCCS
T ss_pred CCCce-ECCCCC-cccCCHHHHHHHHH-HcCCC
Confidence 46799 999999 99999999999954 56543
No 12
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=96.60 E-value=0.00058 Score=43.20 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=26.9
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHHHHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKREQKK 63 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeREr~K 63 (230)
...|| .|.+|| ..|.....|.+|.+.+|..|...
T Consensus 4 ~~kp~-~C~~C~-k~F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 4 RDKPY-ACDICG-KRYKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp TTSCE-ECTTTC-CEESSHHHHHHHHHHSSCC----
T ss_pred CCcCE-ECCCcC-cccCCHHHHHHHhhhhcCCCCCC
Confidence 35699 999999 99999999999998788766543
No 13
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=96.60 E-value=0.00065 Score=36.89 Aligned_cols=26 Identities=15% Similarity=0.339 Sum_probs=22.4
Q ss_pred CCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
.|| .|.+|| ..|.....|..|.+ +|.
T Consensus 1 k~~-~C~~C~-~~f~~~~~l~~H~~-~h~ 26 (29)
T 1ard_A 1 RSF-VCEVCT-RAFARQEHLKRHYR-SHT 26 (29)
T ss_dssp CCC-BCTTTC-CBCSSHHHHHHHHH-HHS
T ss_pred CCe-ECCCCC-cccCCHHHHHHHHH-Hhc
Confidence 389 999999 99999999999965 454
No 14
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.59 E-value=0.001 Score=40.64 Aligned_cols=31 Identities=19% Similarity=0.344 Sum_probs=26.3
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~-~~H~~~ 38 (46)
T 2en3_A 8 TGEKPF-QCKECG-MNFSWSCSLFKHL-RSHERT 38 (46)
T ss_dssp CCCCSE-ECSSSC-CEESSSHHHHHHH-HHHHHS
T ss_pred CCCCCe-eCcccC-hhhCCHHHHHHHH-HHhCCC
Confidence 356799 999999 9999999999997 467654
No 15
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=95.60 E-value=0.00034 Score=38.48 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=23.2
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
|| .|..|| ..|.....|..|-+ +|..|
T Consensus 2 ~~-~C~~C~-k~f~~~~~l~~H~~-~H~~~ 28 (29)
T 2lvt_A 2 PC-QCVMCG-KAFTQASSLIAHVR-QHTGE 28 (29)
Confidence 79 999999 99999999999964 66544
No 16
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.56 E-value=0.00069 Score=38.98 Aligned_cols=29 Identities=17% Similarity=0.181 Sum_probs=24.4
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
...|| .|..|| ..|.....|..|.+ +|..
T Consensus 6 ~~k~~-~C~~C~-k~f~~~~~l~~H~~-~H~~ 34 (36)
T 2elt_A 6 SGKPY-KCPQCS-YASAIKANLNVHLR-KHTG 34 (36)
T ss_dssp CCCSE-ECSSSS-CEESSHHHHHHHHH-HHTC
T ss_pred CCCCC-CCCCCC-cccCCHHHHHHHHH-HccC
Confidence 35699 999999 99999999999964 5643
No 17
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=96.56 E-value=0.00047 Score=37.65 Aligned_cols=25 Identities=20% Similarity=0.282 Sum_probs=22.0
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
|| .|..|| ..|.+...|..|.+ +|.
T Consensus 2 ~~-~C~~C~-k~f~~~~~l~~H~~-~H~ 26 (29)
T 1rik_A 2 KF-ACPECP-KRFMRSDHLTLHIL-LHE 26 (29)
T ss_dssp CE-ECSSSS-CEESCSHHHHHHHT-GGG
T ss_pred Cc-cCCCCC-chhCCHHHHHHHHH-Hhc
Confidence 79 999999 99999999999964 464
No 18
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=96.55 E-value=0.00066 Score=38.99 Aligned_cols=28 Identities=14% Similarity=0.295 Sum_probs=23.9
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
...|| .|.+|| ..|.+...|..|.+ +|.
T Consensus 4 ~~k~~-~C~~C~-k~f~~~~~l~~H~~-~H~ 31 (35)
T 1srk_A 4 GKRPF-VCRICL-SAFTTKANCARHLK-VHT 31 (35)
T ss_dssp CCSCE-ECSSSC-CEESSHHHHHHHHG-GGT
T ss_pred CCcCe-eCCCCC-cccCCHHHHHHHHH-HcC
Confidence 45789 999999 99999999999964 464
No 19
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=96.49 E-value=0.0018 Score=37.53 Aligned_cols=27 Identities=22% Similarity=0.204 Sum_probs=23.1
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHh
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
...|| .|.+|| ..|.+...|..|.+ +|
T Consensus 8 ~~k~~-~C~~C~-k~f~~~~~l~~H~~-~H 34 (37)
T 1p7a_A 8 GIKPF-QCPDCD-RSFSRSDHLALHRK-RH 34 (37)
T ss_dssp CSSSB-CCTTTC-CCBSSHHHHHHHHG-GG
T ss_pred CCCCc-cCCCCC-cccCcHHHHHHHHH-Hh
Confidence 45699 999999 99999999999954 34
No 20
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=96.49 E-value=0.0006 Score=43.75 Aligned_cols=31 Identities=32% Similarity=0.519 Sum_probs=27.5
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...|| .|.+|| ..|.+...|..|.+++|..|
T Consensus 9 ~~k~~-~C~~C~-k~f~~~~~L~~H~~~~H~~~ 39 (54)
T 2eps_A 9 VGKPY-ICQSCG-KGFSRPDHLNGHIKQVHTSE 39 (54)
T ss_dssp SSCCE-ECSSSC-CEESSHHHHHHHHHHTSCCC
T ss_pred CCCCe-ECCCCC-cccCCHHHHHHHHHHhcCCC
Confidence 45789 999999 99999999999999888654
No 21
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.47 E-value=0.00068 Score=39.30 Aligned_cols=28 Identities=14% Similarity=0.086 Sum_probs=23.8
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
...|| .|.+|| ..|.....|..|.+ +|.
T Consensus 6 ~~k~~-~C~~C~-k~f~~~~~l~~H~~-~H~ 33 (36)
T 2elv_A 6 SGLLY-DCHICE-RKFKNELDRDRHML-VHG 33 (36)
T ss_dssp CCCCE-ECSSSC-CEESSHHHHHHHHT-TTS
T ss_pred CCCCe-ECCCCC-CccCCHHHHHHHHH-Hhc
Confidence 45689 999999 99999999999964 454
No 22
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=95.46 E-value=0.00047 Score=37.78 Aligned_cols=28 Identities=29% Similarity=0.487 Sum_probs=23.3
Q ss_pred CCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
.|| .|..|| ..|.+...|..|.+ +|..|
T Consensus 2 k~~-~C~~C~-k~f~~~~~l~~H~~-~h~~~ 29 (30)
T 2lvr_A 2 KPY-VCIHCQ-RQFADPGALQRHVR-IHTGE 29 (30)
Confidence 489 999999 99999999999965 46443
No 23
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=96.45 E-value=0.00097 Score=37.97 Aligned_cols=29 Identities=10% Similarity=0.128 Sum_probs=24.3
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
...|| .|..|| ..|.....|..|.+ +|..
T Consensus 4 ~~k~~-~C~~C~-k~f~~~~~L~~H~~-~h~~ 32 (35)
T 2elx_A 4 GSSGY-VCALCL-KKFVSSIRLRSHIR-EVHG 32 (35)
T ss_dssp CCCSE-ECSSSC-CEESSHHHHHHHHH-HTSC
T ss_pred CCCCe-ECCCCc-chhCCHHHHHHHHH-HHcC
Confidence 45689 999999 99999999999965 4543
No 24
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.44 E-value=0.0012 Score=38.40 Aligned_cols=29 Identities=14% Similarity=0.140 Sum_probs=24.4
Q ss_pred CCCCcccccccCCCcccCc-hHHHHHHHHHhHH
Q 046085 28 PAEPYVLVIVEGDLRLYNN-DKLVNHFKQIHKR 59 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~-~kL~kHFkqlHeR 59 (230)
...|| .|.+|| ..|... ..|..|.+ +|..
T Consensus 6 ~~k~~-~C~~C~-k~f~~~~~~L~~H~~-~H~~ 35 (37)
T 2elp_A 6 SGRAM-KCPYCD-FYFMKNGSDLQRHIW-AHEG 35 (37)
T ss_dssp CCCCE-ECSSSS-CEECSSCHHHHHHHH-HHHT
T ss_pred CCCCe-ECCCCC-hhhccCHHHHHHHHH-hcCC
Confidence 45789 999999 999999 99999974 5653
No 25
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=96.42 E-value=0.0014 Score=35.47 Aligned_cols=26 Identities=19% Similarity=0.356 Sum_probs=22.6
Q ss_pred CCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
.|| .|..|| ..|.+...|..|.+ +|.
T Consensus 2 k~~-~C~~C~-~~f~~~~~l~~H~~-~h~ 27 (30)
T 2m0d_A 2 KPY-QCDYCG-RSFSDPTSKMRHLE-THD 27 (30)
T ss_dssp CCE-ECTTTC-CEESCHHHHHHHHH-TTC
T ss_pred cCc-cCCCCC-cccCCHHHHHHHHH-Hhc
Confidence 589 999999 99999999999975 453
No 26
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=96.42 E-value=0.0016 Score=35.40 Aligned_cols=23 Identities=13% Similarity=0.290 Sum_probs=21.0
Q ss_pred CCcccccccCCCcccCchHHHHHHH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
.|| .|..|| ..|.+...|..|.+
T Consensus 2 k~~-~C~~C~-k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 2 KPF-SCSLCP-QRSRDFSAMTKHLR 24 (27)
T ss_dssp CCE-ECSSSS-CEESSHHHHHHHHH
T ss_pred cCc-cCCCcC-hhhCCHHHHHHHHH
Confidence 589 999999 99999999999964
No 27
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.41 E-value=0.0011 Score=40.52 Aligned_cols=31 Identities=32% Similarity=0.382 Sum_probs=25.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~-~~H~~~ 38 (46)
T 2enf_A 8 TGEKPY-KCNECG-KVFTQNSHLVRHR-GIHTGE 38 (46)
T ss_dssp CCCCSC-BCSSSC-CBCSSHHHHHHHH-TTTTTS
T ss_pred CCCcCe-ECCCCC-cccCCHHHHHHHH-HhhCCC
Confidence 456799 999999 9999999999996 467544
No 28
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.40 E-value=0.0024 Score=39.09 Aligned_cols=31 Identities=23% Similarity=0.400 Sum_probs=26.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2emz_A 8 SGERPF-KCNECG-KGFGRRSHLAGHLR-LHSRE 38 (46)
T ss_dssp SCCCSC-CCSSSC-CCCSSHHHHHHHHH-HHHHT
T ss_pred CCCCCe-ECCCCC-cccCCHHHHHHHHH-HhCCC
Confidence 346799 999999 99999999999965 67655
No 29
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.38 E-value=0.00085 Score=41.13 Aligned_cols=31 Identities=26% Similarity=0.440 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eoz_A 8 TGEKPY-SCNVCG-KAFVLSAHLNQHLR-VHTQE 38 (46)
T ss_dssp SSCCSE-EETTTT-EEESSHHHHHHHHH-HHSSC
T ss_pred CCCCCe-ECcccC-hhhCCHHHHHHHHH-HhCCC
Confidence 456799 999999 99999999999964 56543
No 30
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.37 E-value=0.0013 Score=39.15 Aligned_cols=30 Identities=27% Similarity=0.392 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 6 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 35 (42)
T 2yte_A 6 SGEKPY-SCAECK-ETFSDNNRLVQHQK-MHTV 35 (42)
T ss_dssp CSCCSC-BCTTTC-CBCSSHHHHHHHHH-HTSC
T ss_pred CCCCCe-ECCCCC-CccCCHHHHHHHHH-HhCC
Confidence 346799 999999 99999999999965 4643
No 31
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.37 E-value=0.00097 Score=39.87 Aligned_cols=31 Identities=26% Similarity=0.335 Sum_probs=26.0
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 7 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 37 (42)
T 2en2_A 7 GGEKPY-KCETCG-ARFVQVAHLRAHVL-IHTGS 37 (42)
T ss_dssp CSSCSE-ECTTTC-CEESSHHHHHHHTH-HHHSC
T ss_pred CCCCCE-eCCCcC-hhhCCHHHHHHHHH-HcCCC
Confidence 356799 999999 99999999999975 67544
No 32
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=95.37 E-value=0.00057 Score=36.94 Aligned_cols=22 Identities=32% Similarity=0.619 Sum_probs=20.3
Q ss_pred CcccccccCCCcccCchHHHHHHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFk 54 (230)
|| .|..|| ..|.+...|..|-+
T Consensus 2 p~-~C~~C~-k~f~~~~~l~~H~~ 23 (26)
T 2lvu_A 2 PY-VCERCG-KRFVQSSQLANHIR 23 (26)
Confidence 89 999999 99999999999954
No 33
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.36 E-value=0.0018 Score=39.65 Aligned_cols=31 Identities=26% Similarity=0.417 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytt_A 8 EGEKPY-QCSECG-KSFSGSYRLTQHWI-THTRE 38 (46)
T ss_dssp SCCCTT-CCSSSC-CCCSSHHHHHHHHT-HHHHC
T ss_pred CCCCCe-eCCCCC-cccCCHHHHHHHHH-HcCCC
Confidence 456789 999999 99999999999964 57654
No 34
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.35 E-value=0.0014 Score=39.86 Aligned_cols=30 Identities=23% Similarity=0.220 Sum_probs=25.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2eov_A 8 TGEKPY-KCSDCG-KSFTWKSRLRIHQK-CHTG 37 (46)
T ss_dssp SSCCSC-BCSSSC-CBCSSHHHHHHHHH-HHSC
T ss_pred CCCCCc-cCCccC-hhhCCHHHHHHHHH-hcCC
Confidence 346799 999999 99999999999964 6753
No 35
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.34 E-value=0.0016 Score=39.90 Aligned_cols=31 Identities=29% Similarity=0.379 Sum_probs=26.0
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2eoo_A 8 SGERPY-GCNECG-KNFGRHSHLIEHLK-RHFRE 38 (46)
T ss_dssp SCCCCE-ECSSSC-CEESSHHHHHHHHH-HHHST
T ss_pred CCCCCE-EccccC-cccCCHHHHHHHHH-HHcCC
Confidence 456799 999999 99999999999964 47654
No 36
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.33 E-value=0.0016 Score=39.90 Aligned_cols=31 Identities=16% Similarity=0.121 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2en9_A 8 AGKKLF-KCNECK-KTFTQSSSLTVHQR-IHTGE 38 (46)
T ss_dssp CSSCCC-BCTTTC-CBCSSHHHHHHHHH-HHTSS
T ss_pred CCCCCE-ECCccC-cccCCHHHHHHHHH-HcCCC
Confidence 346799 999999 99999999999965 57543
No 37
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.29 E-value=0.0015 Score=39.75 Aligned_cols=31 Identities=26% Similarity=0.399 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eor_A 8 TGEKPY-NCEECG-KAFIHDSQLQEHQR-IHTGE 38 (46)
T ss_dssp SCCCSE-ECTTTC-CEESSHHHHHHHHH-HHHSC
T ss_pred CCCcCc-cCCCCC-CCcCCHHHHHHHHH-hcCCC
Confidence 356799 999999 99999999999964 57543
No 38
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=96.29 E-value=0.0027 Score=34.31 Aligned_cols=23 Identities=22% Similarity=0.281 Sum_probs=21.0
Q ss_pred CcccccccCCCcccCchHHHHHHHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQ 55 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkq 55 (230)
|| .|..|| ..|.+...|..|-+.
T Consensus 2 ~~-~C~~C~-k~f~~~~~l~~H~~~ 24 (30)
T 1klr_A 2 TY-QCQYCE-FRSADSSNLKTHIKT 24 (30)
T ss_dssp CC-CCSSSS-CCCSCSHHHHHHHHH
T ss_pred Cc-cCCCCC-CccCCHHHHHHHHHH
Confidence 79 999999 999999999999653
No 39
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.27 E-value=0.0016 Score=40.02 Aligned_cols=31 Identities=16% Similarity=0.160 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2eom_A 8 HGERGH-RCSDCG-KFFLQASNFIQHRR-IHTGE 38 (46)
T ss_dssp CCCSSC-CCSSSC-CCCSSHHHHHHHHH-HHSSC
T ss_pred CCCCCc-CCCCCC-CeeCChHHHHHHHH-HhCCC
Confidence 346799 999999 99999999999965 56543
No 40
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.26 E-value=0.0012 Score=39.72 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (44)
T 2en7_A 8 TGMKPY-VCNECG-KAFRSKSYLIIHT-RTHTGE 38 (44)
T ss_dssp SSSSSS-CCTTTC-CCCSSHHHHHHHH-TTTCCS
T ss_pred CCCcCe-ECCCCC-CccCCHHHHHHHh-hhcCCC
Confidence 356799 999999 9999999999997 456443
No 41
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.23 E-value=0.002 Score=39.05 Aligned_cols=31 Identities=16% Similarity=0.138 Sum_probs=25.4
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (44)
T 2eou_A 8 AAKTTS-ECQECG-KIFRHSSLLIEHQA-LHAGE 38 (44)
T ss_dssp SSSCCC-CCTTTC-CCCSSHHHHHHHHH-HHTTS
T ss_pred CCCcCe-ECCCCC-cccCCHHHHHHHHH-HHCCC
Confidence 346789 999999 99999999999964 56543
No 42
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.23 E-value=0.0012 Score=40.24 Aligned_cols=31 Identities=29% Similarity=0.347 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~-~~H~~~ 38 (46)
T 2yti_A 8 TGEKPY-KCNECG-KVFTQNSHLARHR-GIHTGE 38 (46)
T ss_dssp SCCCTT-CCSSSC-CCCSSHHHHHHHH-TTTSCS
T ss_pred CCCcCe-ECCCCC-cccCChhHHHHHh-HhcCCC
Confidence 456799 999999 9999999999995 456543
No 43
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.22 E-value=0.00095 Score=48.73 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=21.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+.+|..|
T Consensus 52 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~~~H~~E 83 (85)
T 2lv2_A 52 HAAQVF-PCKYCP-ATFYSSPGLTRHINKCHPSE 83 (85)
T ss_dssp SCSSSE-ECTTSS-CEESSHHHHHHHHHTTCTTC
T ss_pred cCCCcc-CCCCCC-CEeCCHHHHHHhCcccCcCC
Confidence 345567 777777 77777777777776666554
No 44
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=96.22 E-value=0.0016 Score=39.89 Aligned_cols=31 Identities=23% Similarity=0.340 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emj_A 8 TGEKPF-ECAECG-KSFSISSQLATHQR-IHTGE 38 (46)
T ss_dssp CCCCSE-ECSSSS-CEESSHHHHHHHHH-HHTTS
T ss_pred CCCCCE-ECCCCC-cccCCHHHHHHHHH-HhCCC
Confidence 356799 999999 99999999999965 57543
No 45
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.22 E-value=0.0015 Score=40.01 Aligned_cols=31 Identities=19% Similarity=0.226 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eoh_A 8 SGKKPY-ECKECR-KTFIQIGHLNQHKR-VHTGE 38 (46)
T ss_dssp CCSCSC-CCSSSC-CCCSSHHHHHHHHH-HCSSC
T ss_pred CCCCCc-CCCCcC-chhCCHHHHHHHHH-HhCCC
Confidence 345799 999999 99999999999964 56543
No 46
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.22 E-value=0.0024 Score=39.22 Aligned_cols=31 Identities=19% Similarity=0.364 Sum_probs=25.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytm_A 8 TGEKPY-KCMECG-KAFGDNSSCTQHQR-LHTGQ 38 (46)
T ss_dssp SSCCSS-SBTTTT-BCCSSHHHHHHHHH-HHHSC
T ss_pred CCCCCc-CCCCCC-chhCCHHHHHHHHH-HcCCC
Confidence 456799 999999 99999999999975 46543
No 47
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.21 E-value=0.0019 Score=38.04 Aligned_cols=29 Identities=17% Similarity=0.118 Sum_probs=24.9
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
...|| .|..|| ..|.+...|..|-.++|.
T Consensus 6 ~~k~~-~C~~C~-k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 6 SGHLY-YCSQCH-YSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp SSCEE-ECSSSS-CEEECHHHHHHHHHHHTC
T ss_pred CCcCe-ECCCCC-cccCCHHHHHHHHHHHcc
Confidence 35689 999999 999999999999656774
No 48
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.21 E-value=0.0018 Score=39.54 Aligned_cols=31 Identities=32% Similarity=0.555 Sum_probs=26.0
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emh_A 8 TGERPY-ICTVCG-KAFTDRSNLIKHQK-IHTGE 38 (46)
T ss_dssp SCCCSE-ECTTTC-CEESSHHHHHHHHH-HHHCS
T ss_pred CCCCCc-CCCCCC-chhCCHHHHHHHHH-hcCCC
Confidence 456799 999999 99999999999975 67544
No 49
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=96.20 E-value=0.0014 Score=36.00 Aligned_cols=23 Identities=13% Similarity=0.156 Sum_probs=20.8
Q ss_pred CCcccccccCCCcccCchHHHHHHH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
.|| .|..|| ..|.....|..|.+
T Consensus 2 k~~-~C~~C~-k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 2 APY-RCPLCR-AGCPSLASMQAHMR 24 (27)
T ss_dssp CTE-EETTTT-EEESCHHHHHHHHT
T ss_pred cCc-CCCCCC-cccCCHHHHHHHHH
Confidence 589 999999 99999999999953
No 50
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.20 E-value=0.0018 Score=39.52 Aligned_cols=31 Identities=19% Similarity=0.346 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eoq_A 8 TGEKPF-KCDICG-KSFCGRSRLNRHSM-VHTAE 38 (46)
T ss_dssp SSSCSC-CCSSSC-CCCSSHHHHHHHHH-HTTCC
T ss_pred CCCCCc-CCCcCC-chhCCHHHHHHHHH-HcCCC
Confidence 356799 999999 99999999999954 57543
No 51
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.20 E-value=0.0013 Score=40.13 Aligned_cols=31 Identities=29% Similarity=0.342 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~-~~H~~~ 38 (46)
T 2ytn_A 8 TGKKPY-KCNECG-KVFTQNSHLARHR-GIHTGE 38 (46)
T ss_dssp SCCSSC-BCTTTC-CBCSSHHHHHHHG-GGTSCC
T ss_pred CCCcCe-ECCCCC-CeeCCHHHHHHHh-hhcCCC
Confidence 457799 999999 9999999999995 456543
No 52
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.19 E-value=0.0014 Score=40.06 Aligned_cols=30 Identities=23% Similarity=0.371 Sum_probs=25.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2emg_A 8 TGENPF-ICSECG-KVFTHKTNLIIHQK-IHTG 37 (46)
T ss_dssp CSCCSC-BCTTTC-CBCSSHHHHHHHHT-TTSC
T ss_pred CCCCCE-ECCccC-cccCCHHHHHHHHH-HhCC
Confidence 346799 999999 99999999999964 5653
No 53
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.19 E-value=0.0016 Score=39.62 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..+
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytr_A 8 TGEKPY-KCNECG-KAFSQTSKLARHQR-IHTGE 38 (46)
T ss_dssp SSCCTT-CCTTTC-CCCSSHHHHHHHHT-TTTTC
T ss_pred CCCcCc-CCCCCC-CccCCHHHHHHHHH-hcCCC
Confidence 456799 999999 99999999999964 56543
No 54
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=96.19 E-value=0.0014 Score=39.05 Aligned_cols=30 Identities=20% Similarity=0.222 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 7 ~~~~~~-~C~~C~-k~f~~~~~l~~H~~-~H~~ 36 (42)
T 2epc_A 7 GGETPY-LCGQCG-KSFTQRGSLAVHQR-SCSQ 36 (42)
T ss_dssp CSSCCE-ECSSSC-CEESSHHHHHHHHH-HTTC
T ss_pred CCCCCe-ECCCCC-cccCCHHHHHHHhh-hcCC
Confidence 456799 999999 99999999999964 5643
No 55
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=96.18 E-value=0.0017 Score=35.27 Aligned_cols=23 Identities=26% Similarity=0.530 Sum_probs=20.9
Q ss_pred CCcccccccCCCcccCchHHHHHHH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
.|| .|.+|| ..|.+...|..|.+
T Consensus 2 k~~-~C~~C~-k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 2 RPY-SCSVCG-KRFSLKHQMETHYR 24 (28)
T ss_dssp CSE-ECSSSC-CEESCHHHHHHHHT
T ss_pred cCc-cCCCCC-cccCCHHHHHHHHH
Confidence 589 999999 99999999999964
No 56
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.18 E-value=0.0016 Score=39.89 Aligned_cols=31 Identities=26% Similarity=0.403 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. ++|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2yth_A 8 SGEKPF-QCEECG-KRFTQNSHLHSHQ-RVHTGE 38 (46)
T ss_dssp CCSSSB-CCSSSC-CCBSSHHHHHHHG-GGGTTC
T ss_pred CCCcCC-CCCCCC-cccCCHHHHHHHH-HhcCCC
Confidence 356799 999999 9999999999995 457544
No 57
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.18 E-value=0.0013 Score=40.21 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=25.4
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~~~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emi_A 8 TGERHY-ECSECG-KAFIQKSTLSMHQR-IHRGE 38 (46)
T ss_dssp SSCCCE-ECSSSC-CEESSHHHHHHHHG-GGCSC
T ss_pred CCCCCC-CCCCCC-cccCCHHHHHHHHh-HhCCC
Confidence 346789 999999 99999999999954 56543
No 58
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.17 E-value=0.0015 Score=40.06 Aligned_cols=31 Identities=23% Similarity=0.265 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2em6_A 8 MGEKCY-KCDVCG-KEFSQSSHLQTHQ-RVHTGE 38 (46)
T ss_dssp CCCCCC-BCSSSC-CBCSSHHHHHHHH-TTTSSS
T ss_pred CCCCCe-ECCCCC-cccCCHHHHHHHH-HHcCCC
Confidence 456799 999999 9999999999995 467543
No 59
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.14 E-value=0.0016 Score=41.61 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=25.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|.+|.+.+|..
T Consensus 26 ~~~~~~-~C~~C~-~~f~~~~~l~~H~~~~H~~ 56 (60)
T 2adr_A 26 TNEKPY-PCGLCN-RAFTRRDLLIRHAQKIHSG 56 (60)
T ss_dssp TSSCSE-ECTTTC-CEESSHHHHHHHHTTTSCC
T ss_pred CCCCCc-cCCCCC-CccCCHHHHHHHHHHHcCC
Confidence 345689 999999 9999999999998888854
No 60
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.14 E-value=0.0016 Score=39.91 Aligned_cols=31 Identities=26% Similarity=0.361 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2em4_A 8 TGQRPY-ECIECG-KAFKTKSSLICHRR-SHTGE 38 (46)
T ss_dssp CCSSSE-ECSSSC-CEESSHHHHHHHHH-HHSSS
T ss_pred CCCcCc-CCCCCC-CccCCHHHHHHHHH-hcCCC
Confidence 346799 999999 99999999999964 56543
No 61
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.13 E-value=0.0019 Score=39.29 Aligned_cols=31 Identities=19% Similarity=0.203 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq4_A 8 TGEKLY-NCKECG-KSFSRAPCLLKHER-LHSGE 38 (46)
T ss_dssp SCCCCC-CBTTTT-BCCSCHHHHHHHHH-HCCSS
T ss_pred CCCCCe-ECCCCC-CccCchHHHHHHHH-hcCCC
Confidence 456799 999999 99999999999964 56543
No 62
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.13 E-value=0.0017 Score=39.50 Aligned_cols=31 Identities=26% Similarity=0.346 Sum_probs=25.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ep1_A 8 TGEKPY-ECSDCG-KSFIKKSQLHVHQR-IHTGE 38 (46)
T ss_dssp SSCCSS-CCSSSC-CCCSSHHHHHHHHG-GGSSS
T ss_pred CCCCCc-CCCCCC-chhCCHHHHHHHHH-HhCCC
Confidence 356799 999999 99999999999975 57544
No 63
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.13 E-value=0.0014 Score=39.87 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.....|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (44)
T 2epv_A 8 SGEKPY-ECNECG-KAFIWKSLLIVHER-THAGV 38 (44)
T ss_dssp CCCCSE-ECSSSC-CEESSHHHHHHHHG-GGSSC
T ss_pred CCCcCe-ECCCCC-cccCchHHHHHHHh-HhcCC
Confidence 346799 999999 99999999999964 56543
No 64
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.13 E-value=0.0017 Score=39.68 Aligned_cols=31 Identities=32% Similarity=0.495 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytk_A 8 SGEKPY-KCNECG-KVFTQNSHLTNHWR-IHTGE 38 (46)
T ss_dssp SSSCSE-ECSSSC-CEESSHHHHHHHHH-HHSSS
T ss_pred CCCCCE-eCCcCC-CccCCHHHHHHHHH-HHCCC
Confidence 456799 999999 99999999999975 56543
No 65
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.12 E-value=0.003 Score=36.53 Aligned_cols=29 Identities=14% Similarity=0.179 Sum_probs=24.4
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
...|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 6 ~~k~~-~C~~C~-k~f~~~~~l~~H~~-~h~~ 34 (37)
T 2elo_A 6 SGRSY-SCPVCE-KSFSEDRLIKSHIK-TNHP 34 (37)
T ss_dssp CCCCC-EETTTT-EECSSHHHHHHHHH-HHCS
T ss_pred CCCCc-CCCCCC-CccCCHHHHHHHHH-HHcC
Confidence 45789 999999 99999999999975 4543
No 66
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=96.12 E-value=0.002 Score=41.14 Aligned_cols=30 Identities=10% Similarity=0.134 Sum_probs=25.4
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 21 ~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 50 (54)
T 1yui_A 21 SEQPA-TCPICY-AVIRQSRNLRRHLE-LRHFA 50 (54)
T ss_dssp SSCCE-ECTTTC-CEESSHHHHHHHHH-HHTTT
T ss_pred CCCCc-cCCCCC-cccCCHHHHHHHHH-HhccC
Confidence 45789 999999 99999999999975 57544
No 67
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.12 E-value=0.0016 Score=39.70 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2epz_A 8 TGEKPF-DCIDCG-KAFSDHIGLNQHRR-IHTGE 38 (46)
T ss_dssp CCCCSB-CCTTTC-CCBSSHHHHHHHHT-TTTTC
T ss_pred CCCCCe-ECCCCC-ceeCCHHHHHHHHH-HhCCC
Confidence 346799 999999 99999999999975 56543
No 68
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.12 E-value=0.0027 Score=38.58 Aligned_cols=31 Identities=10% Similarity=0.077 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|..|| ..|.+...|..|.+ +|..|
T Consensus 6 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 36 (43)
T 2yrm_A 6 SGNGAF-FCNECD-CRFSEEASLKRHTL-QTHSD 36 (43)
T ss_dssp SSSCCB-CCSSSC-CCBSSHHHHHHHHH-HHTCT
T ss_pred CCCCCE-ECCCCC-CeeCChHHHHHHHH-hhCCC
Confidence 346799 999999 99999999999965 46543
No 69
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.11 E-value=0.0017 Score=39.67 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=26.0
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2yu8_A 8 TGEKPY-KCNECG-KVFTQNSHLARHRR-VHTGG 38 (46)
T ss_dssp CCCSSE-ECSSSC-CEESSSHHHHHHTH-HHHSC
T ss_pred CCCCCe-ECCcCC-chhCCHHHHHHHHH-hcCCC
Confidence 457799 999999 99999999999964 67544
No 70
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.11 E-value=0.001 Score=40.57 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~-~~H~~~ 38 (45)
T 2epu_A 8 TGQKPF-ECTHCG-KSFRAKGNLVTHQ-RIHTGE 38 (45)
T ss_dssp CSCCSE-EETTTT-EEESSHHHHHHHH-TTTSSC
T ss_pred CCCcCc-cCCCCC-CccCChHHHHHHH-HHhCCC
Confidence 346799 999999 9999999999995 467543
No 71
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.09 E-value=0.0015 Score=40.01 Aligned_cols=31 Identities=23% Similarity=0.322 Sum_probs=25.4
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2enh_A 8 TGEKPY-ECDVCR-KAFSHHASLTQHQR-VHSGE 38 (46)
T ss_dssp CCSSSC-BCTTTC-CBCSSSHHHHHHGG-GSCCS
T ss_pred CCCCCc-CCCCcC-chhCCHHHHHHHHH-HhCCC
Confidence 346799 999999 99999999999964 56443
No 72
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.09 E-value=0.0018 Score=39.67 Aligned_cols=30 Identities=20% Similarity=0.170 Sum_probs=25.3
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~ 37 (46)
T 2elz_A 8 SVEKPY-KCEDCG-KGYNRRLNLDMHQR-VHMG 37 (46)
T ss_dssp CCCSSC-BCSSSC-CBCSSHHHHHHHGG-GGGS
T ss_pred CCCCCe-eCcccC-chhCCHHHHHHHHH-hcCC
Confidence 456799 999999 99999999999965 5653
No 73
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.07 E-value=0.0014 Score=39.98 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.....|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq1_A 8 TGEKPY-KCNECG-KAFRAHSNLTTHQV-IHTGE 38 (46)
T ss_dssp CCSCCC-CCTTTT-CCCSSHHHHHHHHT-TTCCS
T ss_pred CCCCCe-ECCcCC-hhhCCHHHHHHHHH-HhCCC
Confidence 346799 999999 99999999999965 56543
No 74
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.06 E-value=0.0018 Score=39.60 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2yto_A 8 TGEKPY-KCSDCG-KAFTRKSGLHIHQQ-SHTGE 38 (46)
T ss_dssp CSCCCE-ECSSSC-CEESSHHHHHHHHH-HHTCC
T ss_pred CCCCCE-ECcccC-CccCCHhHHHHHHH-HcCCC
Confidence 456799 999999 99999999999964 46543
No 75
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.06 E-value=0.0017 Score=39.44 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=25.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2emm_A 8 TGERPH-KCNECG-KSFIQSAHLIQHQR-IHTG 37 (46)
T ss_dssp SCCCSE-ECSSSC-CEESSHHHHHHHHH-HHSC
T ss_pred CCCCCe-eCCCCC-hhhCCHHHHHHHHH-HhCC
Confidence 356799 999999 99999999999964 5653
No 76
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=96.06 E-value=0.0024 Score=39.06 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=25.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emk_A 8 TGEKPY-ECKECG-KAFSQTTHLIQHQR-VHTGE 38 (46)
T ss_dssp SSSCSC-BCSSSC-CBCSCHHHHHHHHH-HHSSC
T ss_pred CCCCce-ECCCCC-chhCCHHHHHHHHH-HcCCC
Confidence 456799 999999 99999999999975 56543
No 77
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.05 E-value=0.0017 Score=39.45 Aligned_cols=31 Identities=23% Similarity=0.239 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eow_A 8 TGEKPY-KCNECG-KAFRARSSLAIHQA-THSGE 38 (46)
T ss_dssp CCCCCE-ECTTSC-CEESSHHHHHHHHH-HHCCC
T ss_pred CCCCCe-eccccC-ChhcCHHHHHHHHH-HcCCC
Confidence 356799 999999 99999999999975 56543
No 78
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.04 E-value=0.0019 Score=43.42 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=23.6
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHKREQ 61 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHeREr 61 (230)
..|| .|.+|| ..|.+...|.+|.+..|..++
T Consensus 36 ~~~~-~C~~C~-k~f~~~~~L~~H~~~~H~~~~ 66 (78)
T 2d9h_A 36 ALRF-PCEFCG-KRFEKPDSVAAHRSKSHPALL 66 (78)
T ss_dssp TCCE-ECTTTC-CEESSHHHHHHHHHHTSTTTS
T ss_pred Cccc-CCCCCC-chhCCHHHHHHHHHHhCCCCC
Confidence 4677 888888 888888888888877776553
No 79
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.02 E-value=0.0018 Score=39.53 Aligned_cols=31 Identities=26% Similarity=0.471 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytj_A 8 TGEKPY-ICAECG-KAFTIRSNLIKHQK-IHTKQ 38 (46)
T ss_dssp SSCCSE-ECSSSC-CEESSHHHHHHHHH-HTSCC
T ss_pred CCCcCe-ECCCCC-hhhCCHHHHHHHHH-HcCCC
Confidence 456799 999999 99999999999974 56543
No 80
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.02 E-value=0.0016 Score=40.02 Aligned_cols=31 Identities=29% Similarity=0.442 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eon_A 8 TGEKPY-KCQVCG-KAFRVSSHLVQHHS-VHSGE 38 (46)
T ss_dssp SSCCSC-BCSSSC-CBCSSHHHHHHHTT-TTTSC
T ss_pred CCCccc-CCCCCC-cccCcHHHHHHHHH-hcCCC
Confidence 456799 999999 99999999999964 57543
No 81
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.01 E-value=0.0016 Score=39.71 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2em7_A 8 TGEKPY-KCEECG-KGFICRRDLYTHH-MVHTGE 38 (46)
T ss_dssp SCCCSE-ECSSSC-CEESCHHHHHHHG-GGGTTC
T ss_pred CCCcCc-cCCCcc-chhCCHHHHHHHH-HHhCCC
Confidence 346799 999999 9999999999995 457543
No 82
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=96.01 E-value=0.0025 Score=38.99 Aligned_cols=31 Identities=23% Similarity=0.353 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ely_A 8 TGEKPF-KCVECG-KGFSRRSALNVHHK-LHTGE 38 (46)
T ss_dssp CCCCSB-CCSSSC-CCBSSTTHHHHHHH-HHSCC
T ss_pred CCCCCc-ccCccC-cccCCHHHHHHHHH-HcCCC
Confidence 346799 999999 99999999999975 57543
No 83
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.01 E-value=0.0014 Score=39.51 Aligned_cols=30 Identities=30% Similarity=0.390 Sum_probs=24.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (44)
T 2eoj_A 8 TGENPY-ECCECG-KVFSRKDQLVSHQK-THSG 37 (44)
T ss_dssp SSCCSC-EETTTT-EECSSHHHHHHHHT-TSSS
T ss_pred CCCcCe-eCCCCC-CccCCHHHHHHHHH-HcCC
Confidence 346799 999999 99999999999964 5653
No 84
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.00 E-value=0.0019 Score=39.41 Aligned_cols=31 Identities=26% Similarity=0.318 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~~~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2em3_A 8 TGEKPY-ECKVCS-KAFTQKAHLAQHQK-THTGE 38 (46)
T ss_dssp SSCCSE-ECSSSC-CEESSHHHHHHHHH-HHCCC
T ss_pred CCCcCe-ECCCCC-cccCCHHHHHHHHH-HhCCC
Confidence 456799 999999 99999999999975 46543
No 85
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.00 E-value=0.0022 Score=38.72 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 6 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 36 (44)
T 2emx_A 6 SGEKPF-GCSCCE-KAFSSKSYLLVHQQ-THAEE 36 (44)
T ss_dssp SSCCCE-ECSSSS-CEESSHHHHHHHHH-HHTSS
T ss_pred CCCcCc-cCCCCC-cccCCHHHHHHHHH-HhCCC
Confidence 346799 999999 99999999999965 46543
No 86
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.99 E-value=0.0013 Score=40.09 Aligned_cols=31 Identities=29% Similarity=0.344 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq0_A 8 TGEKPY-KCHECG-KVFRRNSHLARHQL-IHTGE 38 (46)
T ss_dssp TCCCCE-ECTTTC-CEESSHHHHHHHHT-TTCCC
T ss_pred CCCCCe-ECCCCC-chhCCHHHHHHHHH-HcCCC
Confidence 457899 999999 99999999999964 56543
No 87
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=95.98 E-value=0.0018 Score=39.63 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. ++|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2el6_A 8 AGVNPY-KCSQCE-KSFSGKLRLLVHQ-RMHTRE 38 (46)
T ss_dssp CCCCSE-ECSSSS-CEESSHHHHHHHH-GGGCCS
T ss_pred CCCCCe-ECCCCC-cccCCHHHHHHHH-HHcCCC
Confidence 346789 999999 9999999999995 457543
No 88
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.96 E-value=0.0019 Score=39.27 Aligned_cols=31 Identities=29% Similarity=0.358 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|. ++|..|
T Consensus 8 ~~~~~~-~C~~C~-k~F~~~~~L~~H~-~~H~~~ 38 (46)
T 2eoe_A 8 TGEKPY-KCNECG-KVFTQNSHLANHQ-RIHTGV 38 (46)
T ss_dssp CCCCSS-EETTTT-EECSSHHHHHHHH-GGGSCC
T ss_pred CCCCCe-ECCCcC-hhhCCHHHHHHHH-HHcCCC
Confidence 456799 999999 9999999999996 466543
No 89
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.95 E-value=0.0015 Score=40.01 Aligned_cols=31 Identities=19% Similarity=0.153 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|. ++|..|
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2em5_A 8 SSTKSH-QCHECG-RGFTLKSHLNQHQ-RIHTGE 38 (46)
T ss_dssp CCSCSE-ECSSSC-CEESSHHHHHHHH-TTTSCS
T ss_pred CCCCCe-ECCcCC-CccCCHHHHHHHH-HHhCCC
Confidence 456799 999999 9999999999996 557543
No 90
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.95 E-value=0.0022 Score=39.09 Aligned_cols=31 Identities=23% Similarity=0.273 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. ++|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2ytd_A 8 SGEKPY-KCSECG-KAFHRHTHLNEHR-RIHTGY 38 (46)
T ss_dssp CCCCSE-ECSSSC-CEESSHHHHHHHH-HHHTCC
T ss_pred CCCcCe-ECCCCC-CeeCChHHHHHHH-HHcCCC
Confidence 346799 999999 9999999999995 457543
No 91
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.95 E-value=0.0018 Score=39.33 Aligned_cols=30 Identities=27% Similarity=0.347 Sum_probs=25.3
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|. ++|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~ 37 (46)
T 2eme_A 8 SGEKPY-VCDYCG-KAFGLSAELVRHQ-RIHTG 37 (46)
T ss_dssp CCCCSE-ECSSSC-CEESSHHHHHHHH-GGGCC
T ss_pred CCCCCe-ECCCCC-hhhCCHHHHHHHH-HhcCC
Confidence 356799 999999 9999999999997 46643
No 92
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.95 E-value=0.0025 Score=38.84 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2emy_A 8 TGENPY-ECHECG-KAFSRKYQLISHQR-THAGE 38 (46)
T ss_dssp CSSCCE-ECSSSC-CEESSHHHHHHHHH-HHTTS
T ss_pred CCCcCc-CCCCCC-cccCcHHHHHHHHH-HcCCC
Confidence 356799 999999 99999999999965 46543
No 93
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.95 E-value=0.0027 Score=38.86 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=25.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2em8_A 8 SGEKPY-KCVECG-KGYKRRLDLDFHQR-VHTGE 38 (46)
T ss_dssp CSCCSE-ECSSSC-CEESSHHHHHHHHH-HHHCC
T ss_pred CCCCCe-ECcccC-chhCCHHHHHHHHH-HHcCC
Confidence 456799 999999 99999999999975 57543
No 94
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.95 E-value=0.0025 Score=38.25 Aligned_cols=31 Identities=19% Similarity=0.232 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (44)
T 2eof_A 8 TGEKPY-ECNECQ-KAFNTKSNLMVHQR-THTGE 38 (44)
T ss_dssp SCCCSE-ECTTTC-CEESCHHHHHHHHH-HTTTS
T ss_pred CCCCCe-ECCCCC-cccCCHhHHHHHHH-HhCCC
Confidence 346799 999999 99999999999975 56543
No 95
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=95.94 E-value=0.0039 Score=40.43 Aligned_cols=28 Identities=21% Similarity=0.220 Sum_probs=21.2
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHh
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
...|| .|..|| ..|.+...|.+|.+..|
T Consensus 37 ~~~~~-~C~~C~-k~f~~~~~L~~H~~~~H 64 (66)
T 2drp_A 37 NVKVY-PCPFCF-KEFTRKDNMTAHVKIIH 64 (66)
T ss_dssp SCCCE-ECTTTC-CEESCHHHHHHHHHHHT
T ss_pred CCcCe-ECCCCC-CccCCHHHHHHHHHHHc
Confidence 45677 888888 78888888888877666
No 96
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.94 E-value=0.0036 Score=42.08 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=23.0
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.++.|..
T Consensus 11 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 11 SGEKPY-ECYICH-ARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp SCCCSE-ECTTTC-CEESCHHHHHHHHHHHSSS
T ss_pred CCCCCe-ECCCcC-chhCCHHHHHHHHHHhcCC
Confidence 345678 888888 8888888888887777753
No 97
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.93 E-value=0.0013 Score=39.21 Aligned_cols=30 Identities=20% Similarity=0.165 Sum_probs=24.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|. .+|..
T Consensus 6 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~ 35 (41)
T 2ept_A 6 SGQRVY-ECQECG-KSFRQKGSLTLHE-RIHTG 35 (41)
T ss_dssp CCCCCE-ECSSSC-CEESSHHHHHHHG-GGCCC
T ss_pred CCCCCe-ECCCCC-CCcCCHHHHHHHH-HHhCC
Confidence 346799 999999 9999999999995 45643
No 98
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.93 E-value=0.0026 Score=38.60 Aligned_cols=31 Identities=26% Similarity=0.276 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eop_A 8 TGEKPH-ECRECG-KSFSFNSQLIVHQR-IHTGE 38 (46)
T ss_dssp CCCCSC-BCTTTC-CBCSSHHHHHHHHT-TTTTS
T ss_pred CCCCCe-eCCCCC-chhCCHHHHHHHHH-HcCCC
Confidence 356799 999999 99999999999964 46543
No 99
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.93 E-value=0.0019 Score=39.38 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=25.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ep2_A 8 TGEKPY-ECSICG-KSFTKKSQLHVHQQ-IHTGE 38 (46)
T ss_dssp SCCCSE-ECSSSC-CEESSHHHHHHHHH-TTSSC
T ss_pred CCCcCc-CCCCCC-cccCCHHHHHHHHH-HhCCC
Confidence 456799 999999 99999999999975 56543
No 100
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.92 E-value=0.0017 Score=39.66 Aligned_cols=31 Identities=26% Similarity=0.268 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. ++|..|
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2ep0_A 8 TGEKPY-KCDVCH-KSFRYGSSLTVHQ-RIHTGE 38 (46)
T ss_dssp TTCCSE-ECSSSC-CEESSHHHHHHHH-TTTSSS
T ss_pred CCCCCe-eCcccC-cccCChHHHHHHH-HHhCCC
Confidence 456799 999999 9999999999995 467544
No 101
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=95.91 E-value=0.0037 Score=39.31 Aligned_cols=27 Identities=19% Similarity=0.258 Sum_probs=20.0
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHh
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
..|| .|.+|| ..|.+...|..|.+.-|
T Consensus 30 ~~~~-~C~~C~-~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 30 EKPY-KCEFCE-YAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CCCE-ECSSSS-CEESSHHHHHHHHHHHC
T ss_pred CCCc-CCCCCc-chhCCHHHHHHHHHHhc
Confidence 4577 788887 77777777777776655
No 102
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.91 E-value=0.002 Score=39.31 Aligned_cols=31 Identities=23% Similarity=0.359 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2enc_A 8 SGEKPF-KCEECG-KGFYTNSQCYSHQR-SHSGE 38 (46)
T ss_dssp CCCCSE-ECSSSC-CEESSHHHHHHHHH-HSCCS
T ss_pred CCCCCc-CCCCCC-CcCCChHHHHHHHH-HhCCC
Confidence 346799 999999 99999999999964 56543
No 103
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.91 E-value=0.0021 Score=39.23 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eq2_A 8 TGGKPY-QCNECG-KAFSQTSKLARHQR-VHTGE 38 (46)
T ss_dssp SSSCSS-SCCSSC-CCCSSHHHHHHHGG-GGCCC
T ss_pred CCCCCe-ECCCCC-cccCCHHHHHHHHH-HcCCC
Confidence 456799 999999 99999999999964 56543
No 104
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.91 E-value=0.0028 Score=38.62 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=25.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2emp_A 8 TGVKPY-MCNECG-KAFSVYSSLTTHQV-IHTGE 38 (46)
T ss_dssp SCCCSE-ECSSSC-CEESCHHHHHHHHH-HHHCC
T ss_pred CCCcCe-ECCCCC-chhCCHHHHHHHHH-HcCCC
Confidence 456799 999999 99999999999975 56543
No 105
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.89 E-value=0.0023 Score=39.00 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=24.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
....|| .|.+|| ..|.+...|..|.+ +|.
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~ 36 (46)
T 2yso_A 8 SREKSH-QCRECG-EIFFQYVSLIEHQV-LHM 36 (46)
T ss_dssp SCCCCE-ECTTTC-CEESSHHHHHHHHH-HHS
T ss_pred CCCCCE-EccccC-hhhCCHHHHHHHHH-HhC
Confidence 456799 999999 99999999999964 464
No 106
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.88 E-value=0.0021 Score=39.23 Aligned_cols=31 Identities=29% Similarity=0.416 Sum_probs=25.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ep3_A 8 TGEKPY-RCAECG-KAFTDRSNLFTHQK-IHTGE 38 (46)
T ss_dssp SCCCSE-ECSSSC-CEESSHHHHHHHHT-TTTTS
T ss_pred CCCCCe-ECCCCC-chhCCHHHHHHHHH-HcCCC
Confidence 346799 999999 99999999999974 56543
No 107
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=95.88 E-value=0.0019 Score=39.29 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=25.4
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2em9_A 8 TGEKPY-NCKECG-KSFRWASCLLKHQ-RVHSGE 38 (46)
T ss_dssp CCCCSE-ECSSSC-CEESSHHHHHHHG-GGGTSC
T ss_pred CCCcCe-ECCccc-cccCChHHHHHHH-HHhCCC
Confidence 346799 999999 9999999999995 456543
No 108
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=95.88 E-value=0.0022 Score=39.15 Aligned_cols=31 Identities=29% Similarity=0.305 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ema_A 8 TGEKRY-KCNECG-KVFSRNSQLSQHQK-IHTGE 38 (46)
T ss_dssp TTSCCE-ECSSSC-CEESSHHHHHHHHT-GGGCC
T ss_pred CCCcCc-CCCCCc-chhCCHHHHHHHHH-hcCCC
Confidence 346799 999999 99999999999964 56543
No 109
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.86 E-value=0.0024 Score=39.10 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytq_A 8 AGEKPY-GCSECG-KAFSSKSYLIIHMR-THSGE 38 (46)
T ss_dssp SCCCSC-BCSSSC-CBCSCHHHHHHHHT-TTCCS
T ss_pred CCCCCc-CCCccC-hhhCChHHHHHHHH-HhCCC
Confidence 456799 999999 99999999999964 46543
No 110
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.86 E-value=0.0015 Score=39.51 Aligned_cols=30 Identities=27% Similarity=0.248 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..
T Consensus 8 ~~~~~~-~C~~C~-k~F~~~~~L~~H~~-~H~~ 37 (44)
T 2eox_A 8 TDSKSY-NCNECG-KAFTRIFHLTRHQK-IHTR 37 (44)
T ss_dssp CCCCCE-EETTTT-EEESSSHHHHTTHH-HHCC
T ss_pred CCCCCe-ECcccC-cccCCHHHHHHHHH-HhCC
Confidence 356799 999999 99999999999975 4643
No 111
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.85 E-value=0.0017 Score=39.72 Aligned_cols=31 Identities=23% Similarity=0.269 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2ytp_A 8 TGERHY-ECSECG-KAFARKSTLIMHQR-IHTGE 38 (46)
T ss_dssp CCCCCE-ECSSSC-CEESSHHHHHHHHT-TTSCC
T ss_pred CCCCCe-ECCcCC-cccCCHHHHHHHHH-HhCCC
Confidence 356799 999999 99999999999964 56543
No 112
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.83 E-value=0.0047 Score=42.35 Aligned_cols=29 Identities=31% Similarity=0.525 Sum_probs=25.4
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
..|| .|.+|| ..|.+...|..|.+.+|..
T Consensus 63 ~~~~-~C~~C~-~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 63 GKPY-ICQSCG-KGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp CSSB-CCSSSC-CCBSSHHHHHHHHHHTSCC
T ss_pred CCce-ECCCcc-chhCCHHHHHHHHHHhcCC
Confidence 3689 999999 9999999999999988853
No 113
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=95.82 E-value=0.0022 Score=39.09 Aligned_cols=31 Identities=13% Similarity=0.085 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2em0_A 8 MGEKTW-KCRECD-MCFSQASSLRLHQN-VHVGE 38 (46)
T ss_dssp CCCCCC-CCSSSC-CCCSSHHHHHHHGG-GGSSS
T ss_pred CCCcCe-ECCCCC-cccCCHHHHHHHHH-HcCCC
Confidence 356799 999999 99999999999964 46543
No 114
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.82 E-value=0.0025 Score=39.02 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=25.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2em2_A 8 SGEKPF-KCKECG-KAFRQNIHLASHLR-IHTGE 38 (46)
T ss_dssp CCCCSE-ECSSSC-CEESSHHHHHHHHH-HHCCC
T ss_pred CCCCCE-ECCcCC-chhCCHHHHHHHHH-HhCCC
Confidence 356799 999999 99999999999965 56433
No 115
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.81 E-value=0.0018 Score=39.54 Aligned_cols=30 Identities=27% Similarity=0.330 Sum_probs=25.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2ene_A 8 TGEKPY-KCNECG-KVFRHNSYLSRHQR-IHTG 37 (46)
T ss_dssp CCSSSE-ECSSSC-CEESSHHHHHHHHT-TTCC
T ss_pred CCCCCe-ECCCCC-chhCChHHHHHHHh-hcCC
Confidence 456799 999999 99999999999964 5653
No 116
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.79 E-value=0.0025 Score=38.84 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2eml_A 8 TGEKPY-ECSVCG-KAFSHRQSLSVHQR-IHSGK 38 (46)
T ss_dssp SSCCSE-ECSSSC-CEESSHHHHHHHHG-GGSSC
T ss_pred CCCCCe-eCCCcC-CccCCHHHHHHHHH-HhcCC
Confidence 356799 999999 99999999999964 56543
No 117
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.79 E-value=0.0019 Score=39.25 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. .+|..|
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2yts_A 8 TGEKPY-ICNECG-KSFIQKSHLNRHR-RIHTGE 38 (46)
T ss_dssp CSCCSE-ECSSSC-CEESSHHHHHHHG-GGTSSC
T ss_pred CCCcCE-ECCCCC-hhhCChHHHHHHH-HhcCCC
Confidence 356799 999999 9999999999996 466543
No 118
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.78 E-value=0.0017 Score=39.28 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (44)
T 2emb_A 8 HTRKRY-ECSKCQ-ATFNLRKHLIQHQK-THAA 37 (44)
T ss_dssp CCCSSE-ECTTTC-CEESCHHHHHHHGG-GGCC
T ss_pred CCCCCe-ECCCCC-CccCCHHHHHHHHH-HcCC
Confidence 456799 999999 99999999999964 5643
No 119
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.78 E-value=0.0017 Score=39.79 Aligned_cols=30 Identities=20% Similarity=0.200 Sum_probs=25.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~ 37 (46)
T 2emf_A 8 TGGKHF-ECTECG-KAFTRKSTLSMHQK-IHTG 37 (46)
T ss_dssp SSSCCE-ECSSSC-CEESCHHHHHHHGG-GTSC
T ss_pred CCCCCe-ECCCCC-chhCCHHHHHHHHH-HhCC
Confidence 456799 999999 99999999999975 5643
No 120
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=95.77 E-value=0.0025 Score=38.04 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=24.8
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 6 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 35 (42)
T 2el5_A 6 SGENPY-ECSECG-KAFNRKDQLISHQR-THAG 35 (42)
T ss_dssp SSCCSE-ECSSSC-CEESSHHHHHHHHG-GGCC
T ss_pred CCCCCc-cCCCcC-hhhCCHHHHHHHHH-hcCC
Confidence 346799 999999 99999999999964 5643
No 121
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.72 E-value=0.0022 Score=39.00 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=25.4
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 38 (46)
T 2yrj_A 8 TGEKPY-RCGECG-KAFAQKANLTQHQR-IHTGE 38 (46)
T ss_dssp CCCCCE-ECSSSC-CEESSHHHHHHHHT-TTSSC
T ss_pred CCCCCe-ECCCCC-CccCCHHHHHHHHH-HcCCC
Confidence 346789 999999 99999999999964 56543
No 122
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.70 E-value=0.0025 Score=38.71 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=25.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|..|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2ytf_A 8 TGEKPF-ECSECQ-KAFNTKSNLIVHQR-THTG 37 (46)
T ss_dssp CCCCSE-ECSSSC-CEESSHHHHHHHHH-TSCS
T ss_pred CCCCCc-CCCCCC-cccCCHHHHHHHHH-HhCC
Confidence 456799 999999 99999999999964 5643
No 123
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.69 E-value=0.0061 Score=36.73 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (44)
T 2yu5_A 8 AGENPF-KCSKCD-RVFTQRNYLVQHER-THAR 37 (44)
T ss_dssp SCCCSE-ECSSSS-CEESSSHHHHHHHH-HCCC
T ss_pred CCCCCe-ECCCCC-chhCCHHHHHHHhH-hcCC
Confidence 356799 999999 99999999999965 5643
No 124
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.64 E-value=0.0029 Score=38.55 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=25.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2en6_A 8 SGEKPY-GCNECG-KTFSQKSILSAHQR-THTG 37 (46)
T ss_dssp CSSCCE-EETTTT-EEESSHHHHHHHHH-HHSS
T ss_pred CCCcCe-ECCCCC-cccCchHHHHHHHH-HcCC
Confidence 456799 999999 99999999999976 4643
No 125
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=95.63 E-value=0.0043 Score=34.76 Aligned_cols=26 Identities=27% Similarity=0.333 Sum_probs=22.4
Q ss_pred CCccccc--ccCCCcccCchHHHHHHHHHhH
Q 046085 30 EPYVLVI--VEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 30 epy~~C~--VCGdrkf~t~~kL~kHFkqlHe 58 (230)
.|| .|. .|| ..|.+...|..|.+ +|.
T Consensus 2 k~~-~C~~~~C~-k~f~~~~~L~~H~~-~H~ 29 (32)
T 1zfd_A 2 RPY-SCDHPGCD-KAFVRNHDLIRHKK-SHQ 29 (32)
T ss_dssp CSB-CCCCTTCC-CCBSSSHHHHHHHG-GGT
T ss_pred CCC-cCcCCCCC-CccCCHHHHHHHHH-Hcc
Confidence 489 999 899 99999999999964 464
No 126
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=95.60 E-value=0.00028 Score=40.64 Aligned_cols=27 Identities=15% Similarity=0.129 Sum_probs=22.7
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
|| .|..|| ..|.....|.+|. .+|..|
T Consensus 2 p~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 28 (32)
T 2kfq_A 2 AF-ACPACP-KRFMRSDALSKHI-KTAFIV 28 (32)
T ss_dssp CS-SSSSSC-TTHHHHHTTSSST-TSSSSS
T ss_pred CC-CCCCCC-cccCCHHHHHHHH-HHHccC
Confidence 89 999999 9999999999995 456543
No 127
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.59 E-value=0.0026 Score=38.63 Aligned_cols=31 Identities=16% Similarity=0.048 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|..|. ++|..|
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~-~~H~~~ 38 (46)
T 2en8_A 8 SGEKSH-TCDECG-KNFCYISALRIHQ-RVHMGE 38 (46)
T ss_dssp CCCSSE-ECTTTC-CEESSHHHHHHHH-TTTCCS
T ss_pred CCCCCe-ECCCcC-cccCCHHHHHHHH-HHhCCC
Confidence 456799 999999 9999999999996 456433
No 128
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=95.55 E-value=0.006 Score=35.84 Aligned_cols=30 Identities=17% Similarity=0.210 Sum_probs=24.5
Q ss_pred CCCCcccccc--cCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVIV--EGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~V--CGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...|| .|.+ || ..|.....|..|.+ +|.-|
T Consensus 5 ~~k~~-~C~~~~C~-k~f~~~~~L~~H~~-~H~~e 36 (37)
T 1va1_A 5 KKKQH-ICHIQGCG-KVYGKTSHLRAHLR-WHTGE 36 (37)
T ss_dssp SCCCE-ECCSTTCC-CEESCHHHHHHHHH-HHHTT
T ss_pred CCCCC-CCCCCCCC-CccCCHHHHHHHHH-hcCCC
Confidence 45689 9996 99 99999999999965 56543
No 129
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.53 E-value=0.0074 Score=36.02 Aligned_cols=29 Identities=28% Similarity=0.489 Sum_probs=24.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
....|| .|.+|| ..|.+...|.+|.+ +|.
T Consensus 7 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~ 35 (42)
T 2eos_A 7 GGEKPY-PCEICG-TRFRHLQTLKSHLR-IHT 35 (42)
T ss_dssp SSSCCB-CCSSSC-CCBSSHHHHHHHTT-TTS
T ss_pred CCCCCE-ECCCCC-CccCCHHHHHHHHH-hcC
Confidence 346799 999999 99999999999964 564
No 130
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=95.50 E-value=0.0066 Score=38.26 Aligned_cols=28 Identities=14% Similarity=0.306 Sum_probs=24.5
Q ss_pred CccCCCCCcccccccCCCcccCchHHHHHH
Q 046085 24 GVIRPAEPYVLVIVEGDLRLYNNDKLVNHF 53 (230)
Q Consensus 24 g~i~p~epy~~C~VCGdrkf~t~~kL~kHF 53 (230)
|-...+.|| .|..|| ..|.....|.+|-
T Consensus 1 ~~~~gekp~-~C~~Cg-K~F~~~s~L~~H~ 28 (36)
T 1fv5_A 1 GSLLKPARF-MCLPCG-IAFSSPSTLEAHQ 28 (36)
T ss_dssp CCSSSCCCC-EETTTT-EECSCHHHHHHHH
T ss_pred CCCCCccCe-ECCCCC-CccCCHhHccCcC
Confidence 335667899 999999 9999999999996
No 131
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.49 E-value=0.0029 Score=38.66 Aligned_cols=30 Identities=17% Similarity=0.136 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|. .+|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~ 37 (46)
T 2eoy_A 8 QKEKCF-KCNKCE-KTFSCSKYLTQHE-RIHTR 37 (46)
T ss_dssp CCSCCE-ECSSSC-CEESSSHHHHHHH-TTCCS
T ss_pred CCCCCE-ECcCCC-CcCCCHHHHHHHH-HHcCC
Confidence 346799 999999 9999999999996 46643
No 132
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=95.42 E-value=0.0025 Score=39.59 Aligned_cols=30 Identities=17% Similarity=0.073 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
.+..|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (48)
T 2epr_A 8 RTRKQV-ACEICG-KIFRDVYHLNRHKL-SHSG 37 (48)
T ss_dssp CCCCSE-EETTTT-EEESSHHHHHHHGG-GSCS
T ss_pred CCCcCe-eCCCCC-cccCCHHHHHHHHH-hcCC
Confidence 466799 999999 99999999999954 5643
No 133
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=95.41 E-value=0.0047 Score=37.57 Aligned_cols=30 Identities=30% Similarity=0.529 Sum_probs=24.9
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...|| .|.+|| ..|.....|..|.+ +|..|
T Consensus 7 ~~k~~-~C~~C~-k~f~~~~~l~~H~~-~H~~~ 36 (45)
T 2epq_A 7 GEKPY-SCPVCG-LRFKRKDRMSYHVR-SHDGS 36 (45)
T ss_dssp SCCSS-EETTTT-EECSCHHHHHHHHH-HHSCC
T ss_pred CCCCC-cCCCCC-cccCCHHHHHHHHH-HccCC
Confidence 45699 999999 99999999999975 46543
No 134
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.38 E-value=0.0027 Score=38.68 Aligned_cols=30 Identities=17% Similarity=0.224 Sum_probs=25.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|. ++|..
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~-~~H~~ 37 (46)
T 2ytg_A 8 TGEKPF-KCGECG-KSYNQRVHLTQHQ-RVHTG 37 (46)
T ss_dssp SSCCSE-ECTTTC-CEESSSHHHHTTG-GGGSS
T ss_pred CCCCCe-ECCCCC-cccCCHHHHHHHH-HHcCC
Confidence 456799 999999 9999999999995 45653
No 135
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.37 E-value=0.009 Score=36.15 Aligned_cols=31 Identities=16% Similarity=0.223 Sum_probs=25.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 8 ~~~k~~-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 38 (46)
T 2epw_A 8 TGEKPC-KCTECG-KAFCWKSQLIMHQR-THVDD 38 (46)
T ss_dssp CCCCSE-ECSSSC-CEESSSHHHHHHHH-HCCSC
T ss_pred CCCCCe-eCCCCC-CccCCHHHHHHHHH-HhCCC
Confidence 356799 999999 99999999999975 46543
No 136
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.35 E-value=0.007 Score=43.01 Aligned_cols=27 Identities=19% Similarity=0.364 Sum_probs=13.7
Q ss_pred CCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
.|| .|.+|| ..|.+...|.+|.+..|.
T Consensus 93 ~~~-~C~~C~-~~f~~~~~l~~H~~~~H~ 119 (124)
T 2dlq_A 93 MPY-KCSSCS-QQFMQKKDLQSHMIKLHS 119 (124)
T ss_dssp CSE-ECSSSC-CEESSHHHHHHHHHHTSS
T ss_pred CCc-cCCCcc-chhCCHHHHHHHHHHHCC
Confidence 445 555555 555555555555554443
No 137
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=95.35 E-value=0.0063 Score=45.43 Aligned_cols=34 Identities=21% Similarity=0.380 Sum_probs=29.6
Q ss_pred cCCCCCcccccc--cCCCcccCchHHHHHHHHHhHHHH
Q 046085 26 IRPAEPYVLVIV--EGDLRLYNNDKLVNHFKQIHKREQ 61 (230)
Q Consensus 26 i~p~epy~~C~V--CGdrkf~t~~kL~kHFkqlHeREr 61 (230)
.+..-|| .|.. || ..|.....|.+|.+.+|.-|+
T Consensus 22 ~sGEKPY-kC~~~~Cg-KaFsr~s~L~~H~rriHTgEK 57 (73)
T 1x3c_A 22 YSPYRPY-RCVHQGCF-AAFTIQQNLILHYQAVHKSDL 57 (73)
T ss_dssp SCSSCSC-BCCSTTCC-CBCSSHHHHHHHHHHHSSSCC
T ss_pred ccCCCCe-ECCCCCcC-hhHcCHHHHHHHhhhhCCCCC
Confidence 4567899 9975 99 999999999999999998654
No 138
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=95.34 E-value=0.0051 Score=39.87 Aligned_cols=28 Identities=14% Similarity=0.153 Sum_probs=25.5
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHh
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
...|| .|.+|| ..|.+...|..|.+..|
T Consensus 7 ~~k~~-~C~~C~-k~f~~~~~l~~H~~~~H 34 (66)
T 2drp_A 7 GEHTY-RCKVCS-RVYTHISNFCRHYVTSH 34 (66)
T ss_dssp ETTEE-ECTTTC-CEESSHHHHHHHHHHHS
T ss_pred CCcce-ECCCCc-chhCCHHHHHHHHHHHc
Confidence 45799 999999 99999999999998877
No 139
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=95.33 E-value=0.0033 Score=38.16 Aligned_cols=30 Identities=17% Similarity=0.173 Sum_probs=25.0
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|. .+|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~-~~H~~ 37 (46)
T 2el4_A 8 TGVKPY-GCSQCA-KTFSLKSQLIVHQ-RSHTG 37 (46)
T ss_dssp CCCCSE-ECSSSS-CEESSHHHHHHHG-GGSSS
T ss_pred CCCCce-ECCCCC-chhCCHHHHHHHH-HHhCC
Confidence 346789 999999 9999999999996 45643
No 140
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.29 E-value=0.0072 Score=40.56 Aligned_cols=28 Identities=11% Similarity=0.093 Sum_probs=25.6
Q ss_pred CCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
.|| .|.+|| ..|.+...|.+|.+..|.-
T Consensus 44 ~~~-~C~~C~-~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 44 AKF-HCPHCD-TVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SSE-ECSSSS-CEESSHHHHHHHHHHTSCC
T ss_pred Ccc-CCCCCC-CccCCHHHHHHHHHHhCCC
Confidence 689 999999 9999999999999988854
No 141
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.26 E-value=0.0034 Score=38.26 Aligned_cols=30 Identities=23% Similarity=0.381 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|.+|. .+|..
T Consensus 8 ~~~~~~-~C~~C~-k~f~~~~~L~~H~-~~H~~ 37 (46)
T 2en1_A 8 SGEKPF-KCEECG-KRFTQNSQLHSHQ-RVHTG 37 (46)
T ss_dssp CCCCSE-EETTTT-EEESSHHHHHHHG-GGGSC
T ss_pred CCCCCe-eCCCCC-cccCCHHHHHHHH-HHcCC
Confidence 456789 999999 9999999999996 45643
No 142
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=95.20 E-value=0.007 Score=37.98 Aligned_cols=28 Identities=18% Similarity=0.082 Sum_probs=22.0
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
..|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 2 ~~~~-~C~~C~-~~f~~~~~l~~H~~-~h~~ 29 (57)
T 3uk3_C 2 SSSR-ECSYCG-KFFRSNYYLNIHLR-THTG 29 (57)
T ss_dssp ---C-BCTTTC-CBCSCHHHHHHHHH-HHHC
T ss_pred CCCc-cCCCCc-chhCChHHHHHHHH-HcCC
Confidence 3589 999999 99999999999976 4643
No 143
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.19 E-value=0.0077 Score=36.47 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2eq3_A 8 TGEKPY-ECNQCG-KAFSVRSSLTTHQA-IHTG 37 (46)
T ss_dssp CCCCSS-EETTTT-EECSSHHHHHHHHT-TSCC
T ss_pred CCCCCe-ECCCCC-hhhCCHHHHHHHHH-HhCC
Confidence 346799 999999 99999999999964 5643
No 144
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.18 E-value=0.0085 Score=35.49 Aligned_cols=29 Identities=21% Similarity=0.381 Sum_probs=24.4
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
....|| .|.+|| ..|.+...|..|.+ +|.
T Consensus 7 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~ 35 (42)
T 2ytb_A 7 GGEKPY-RCDQCG-KAFSQKGSLIVHIR-VHT 35 (42)
T ss_dssp CSCCSB-CCTTTT-CCBSSHHHHHTTGG-GTS
T ss_pred CCCCCe-eCCCcc-chhCCHHHHHHHHH-HhC
Confidence 346799 999999 99999999999964 554
No 145
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=95.14 E-value=0.011 Score=34.45 Aligned_cols=29 Identities=31% Similarity=0.449 Sum_probs=24.2
Q ss_pred CCCccccc--ccCCCcccCchHHHHHHHHHhHHH
Q 046085 29 AEPYVLVI--VEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 29 ~epy~~C~--VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
..|| .|. .|| ..|.....|..|.+ +|..|
T Consensus 4 ~k~~-~C~~~~C~-k~f~~~~~L~~H~~-~H~~~ 34 (38)
T 1bhi_A 4 DKPF-LCTAPGCG-QRFTNEDHLAVHKH-KHEMT 34 (38)
T ss_dssp CCCE-ECCCTTTC-CEESSHHHHHHHHH-HHHTT
T ss_pred Ccce-ECCCCCCC-cccCCHHHHHHHHH-HhCCC
Confidence 5689 999 599 99999999999974 57544
No 146
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=95.11 E-value=0.007 Score=40.94 Aligned_cols=23 Identities=17% Similarity=0.369 Sum_probs=11.6
Q ss_pred CCcccccccCCCcccCchHHHHHHH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
.|| .|.+|| ..|.+...|..|.+
T Consensus 33 ~~~-~C~~C~-~~f~~~~~l~~H~~ 55 (90)
T 1a1h_A 33 KPF-QCRICM-RNFSRSDHLTTHIR 55 (90)
T ss_dssp CCE-ECTTTC-CEESCHHHHHHHHH
T ss_pred CCc-cCCCCC-cccCCHHHHHHHHH
Confidence 345 555555 55555555555543
No 147
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=95.07 E-value=0.0076 Score=41.26 Aligned_cols=22 Identities=14% Similarity=0.178 Sum_probs=11.5
Q ss_pred CCcccccccCCCcccCchHHHHHH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHF 53 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHF 53 (230)
.|| .|.+|| ..|.+...|.+|.
T Consensus 31 kp~-~C~~C~-k~F~~~~~L~~H~ 52 (60)
T 4gzn_C 31 RPR-SCPECG-KCFRDQSEVNRHL 52 (60)
T ss_dssp CCE-ECTTTC-CEESSHHHHHHHG
T ss_pred cCe-ECCCCC-CCcCCHHHHHHHh
Confidence 455 555555 5555555555553
No 148
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.99 E-value=0.01 Score=43.19 Aligned_cols=32 Identities=22% Similarity=0.238 Sum_probs=27.4
Q ss_pred CccCCCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 24 GVIRPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 24 g~i~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
++-.|.+|| .|.+|| ..|.+...|.+|.+ +|.
T Consensus 21 ~~~~~~~~h-~C~~Cg-k~F~~~~~L~~H~~-~H~ 52 (85)
T 2lv2_A 21 GLSASAECH-LCPVCG-ESFASKGAQERHLR-LLH 52 (85)
T ss_dssp SSCCCCTTE-ECTTSC-CEESSHHHHHHHHH-TTS
T ss_pred CCCCCCCCE-ECCCCC-CCcCcHHHHhhhhh-hcc
Confidence 455688999 999999 99999999999976 454
No 149
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.96 E-value=0.018 Score=40.56 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=28.9
Q ss_pred cCccCCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 23 KGVIRPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 23 ~g~i~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
.|-.+...|| .|..|| ..|.....|.+|.+ +|..+
T Consensus 5 ~~~~~~ekpy-~C~~Cg-K~F~~~s~L~~H~r-~Htg~ 39 (66)
T 2epp_A 5 SSGLREAGIL-PCGLCG-KVFTDANRLRQHEA-QHGVT 39 (66)
T ss_dssp SCSCCCCCCC-CCTTTC-CCCSCHHHHHHHHH-HHTTT
T ss_pred CCCCCCccCc-CCCCCC-CccCCHHHHHhhhh-hhCCC
Confidence 3556778999 999999 99999999999975 46543
No 150
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.90 E-value=0.009 Score=36.30 Aligned_cols=30 Identities=23% Similarity=0.214 Sum_probs=25.0
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 8 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 37 (46)
T 2ysp_A 8 TGEKPY-KCEKCG-KGYNSKFNLDMHQK-VHTG 37 (46)
T ss_dssp SSCCSE-EETTTT-EEESCHHHHHHHHT-TSCS
T ss_pred CCCCCe-ECCCCC-CccCCHHHHHHHHH-hhCC
Confidence 356799 999999 99999999999964 4643
No 151
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=94.89 E-value=0.0045 Score=42.40 Aligned_cols=30 Identities=17% Similarity=0.256 Sum_probs=26.3
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHKREQ 61 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHeREr 61 (230)
+-|| .|.+|| ..|.+...|..|-+ +|..|+
T Consensus 2 EKpy-~C~~C~-k~F~~~~~L~~H~~-~Ht~ek 31 (60)
T 4gzn_C 2 ERPF-FCNFCG-KTYRDASGLSRHRR-AHLGYR 31 (60)
T ss_dssp CCCE-ECTTTC-CEESSHHHHHHHHH-HHHTCC
T ss_pred CCCc-cCCCCC-CEeCCHHHHHHHHH-HhCCCc
Confidence 4599 999999 99999999999974 687765
No 152
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.87 E-value=0.015 Score=38.26 Aligned_cols=28 Identities=18% Similarity=0.320 Sum_probs=19.7
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHh
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
...|| .|.+|| ..|.+...|..|.+.-|
T Consensus 34 ~~~~~-~C~~C~-~~f~~~~~L~~H~~~h~ 61 (70)
T 1x5w_A 34 TDRPF-KCNYCS-FDTKQPSNLSKHMKKFH 61 (70)
T ss_dssp CSCSE-ECSSSS-CEESSHHHHHHHHHHHH
T ss_pred CCCCE-eCCCCC-CccCCHHHHHHHHHHHh
Confidence 44567 788887 77777777877765433
No 153
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=94.86 E-value=0.12 Score=41.58 Aligned_cols=68 Identities=10% Similarity=0.040 Sum_probs=53.1
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+.......+. .....+.+.+..+++|.|++.+.+. ...+..+.+.|+.+|+||..
T Consensus 27 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~l~~~~iPvV~i~~~ 94 (276)
T 3jy6_A 27 KGISSILESRGYIGVLFDANADI---EREKTLLRAIGSRGFDGLILQSFSN--PQTVQEILHQQMPVVSVDRE 94 (276)
T ss_dssp HHHHHHHHTTTCEEEEEECTTCH---HHHHHHHHHHHTTTCSEEEEESSCC--HHHHHHHHTTSSCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCH---HHHHHHHHHHHhCCCCEEEEecCCc--HHHHHHHHHCCCCEEEEecc
Confidence 46778889999998866554443 2334445555578999999999888 88999999999999999876
No 154
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.73 E-value=0.013 Score=38.63 Aligned_cols=30 Identities=13% Similarity=0.004 Sum_probs=25.4
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
.+..|| .|.+|| ..|.+...|..|.+. |..
T Consensus 5 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~~-H~~ 34 (70)
T 1x5w_A 5 SSGHPE-KCSECS-YSCSSKAALRIHERI-HCT 34 (70)
T ss_dssp CCCCSE-ECSSSS-CEESSHHHHHHHHGG-GCC
T ss_pred CCCCCe-ECCCCC-cccCCHHHHHHHHHH-cCC
Confidence 356799 999999 999999999999864 643
No 155
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=94.72 E-value=0.0088 Score=39.84 Aligned_cols=23 Identities=17% Similarity=0.164 Sum_probs=12.8
Q ss_pred CCCcccccccCCCcccCchHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHF 53 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHF 53 (230)
..|| .|..|| ..|.+...|..|.
T Consensus 15 ~~~~-~C~~C~-k~f~~~~~l~~H~ 37 (74)
T 2lce_A 15 DKPY-KCDRCQ-ASFRYKGNLASHK 37 (74)
T ss_dssp CCSB-CCTTSS-CCBSCHHHHHHHH
T ss_pred CCCe-ECCCCC-ceeCCHHHHHHHH
Confidence 3455 555555 5555555555554
No 156
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=94.72 E-value=0.014 Score=32.46 Aligned_cols=25 Identities=28% Similarity=0.546 Sum_probs=21.6
Q ss_pred Cccccc--ccCCCcccCchHHHHHHHHHhH
Q 046085 31 PYVLVI--VEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 31 py~~C~--VCGdrkf~t~~kL~kHFkqlHe 58 (230)
|| .|. .|| ..|.+...|..|.+ +|.
T Consensus 2 p~-~C~~~~C~-k~f~~~~~L~~H~~-~H~ 28 (31)
T 1sp2_A 2 PF-MCTWSYCG-KRFTRSDELQRHKR-THT 28 (31)
T ss_dssp CC-BCCSTTCC-CBCSSHHHHHHHHT-TTS
T ss_pred Cc-CCcCCCCC-cccCCHhHHHHHHH-Hhc
Confidence 89 998 999 99999999999964 454
No 157
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=94.70 E-value=0.018 Score=36.06 Aligned_cols=25 Identities=24% Similarity=0.426 Sum_probs=20.8
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
|| .|.+|| ..|.+...|..|.+. |.
T Consensus 1 p~-~C~~C~-~~f~~~~~l~~H~~~-h~ 25 (57)
T 1bbo_A 1 KY-ICEECG-IRXKKPSMLKKHIRT-HT 25 (57)
T ss_dssp CC-BCTTTC-CBCSSHHHHHHHHHH-TS
T ss_pred CC-cCCCCc-CcCCCHHHHHHHHHh-cC
Confidence 78 899999 999999999999754 54
No 158
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.69 E-value=0.015 Score=38.91 Aligned_cols=30 Identities=23% Similarity=0.307 Sum_probs=24.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
....|| .|.+|| ..|.+...|..|.+..|.
T Consensus 11 ~~~k~~-~C~~C~-~~f~~~~~l~~H~~~~~~ 40 (86)
T 1x6h_A 11 TGEKPY-ACSHCD-KTFRQKQLLDMHFKRYHD 40 (86)
T ss_dssp CCCCCE-ECSSSS-CEESSHHHHHHHHHHTTC
T ss_pred cCCCCC-cCCCCC-CccCCHHHHHHHHHHhcC
Confidence 345788 899998 888888889888877664
No 159
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.54 E-value=0.015 Score=41.20 Aligned_cols=28 Identities=7% Similarity=0.005 Sum_probs=15.3
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
..|| .|.+|| ..|.+...|.+|.+.+|.
T Consensus 67 ~~~~-~C~~C~-~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 67 YKKL-TCLECM-RTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp TGGG-EEGGGT-EECSSHHHHHHHHHHTSC
T ss_pred CCCc-cCcccc-chhCCHHHHHHHHHHHcC
Confidence 3455 555555 555555555555555553
No 160
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.49 E-value=0.023 Score=40.43 Aligned_cols=29 Identities=10% Similarity=0.086 Sum_probs=25.5
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
...|| .|.+|| ..|.+...|.+|.+..|.
T Consensus 77 ~~~~~-~C~~C~-k~f~~~~~L~~H~~~hh~ 105 (115)
T 2dmi_A 77 AQKVL-KCMYCG-HSFESLQDLSVHMIKTKH 105 (115)
T ss_dssp CCSSC-BCSSSC-CBCSSHHHHHHHHHHTTT
T ss_pred CCcce-ECCCCC-CccCCHHHHHHHHHHhCC
Confidence 45799 999999 999999999999887664
No 161
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.46 E-value=0.025 Score=35.63 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=24.3
Q ss_pred CCCCCcccccc--cCCCcccCchHHHHHHHHHhH
Q 046085 27 RPAEPYVLVIV--EGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 27 ~p~epy~~C~V--CGdrkf~t~~kL~kHFkqlHe 58 (230)
+..-|| .|.. || ..|.+...|.+|.+ +|.
T Consensus 5 ~gekp~-~C~~~~C~-k~F~~~~~L~~H~r-~Ht 35 (38)
T 2eln_A 5 SSGILL-KCPTDGCD-YSTPDKYKLQAHLK-VHT 35 (38)
T ss_dssp SCCCCE-ECSSSSCC-CEESCHHHHHHHHH-HHS
T ss_pred CCCCCC-CCCCCCCC-CccCCHHHHHHHHH-hcC
Confidence 456799 9987 99 99999999999964 564
No 162
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=94.37 E-value=0.019 Score=36.39 Aligned_cols=26 Identities=15% Similarity=0.363 Sum_probs=22.8
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
|| .|..|| ..|.+...|..|.+. |..
T Consensus 2 ~~-~C~~C~-~~f~~~~~l~~H~~~-h~~ 27 (60)
T 2adr_A 2 SF-VCEVCT-RAFARQEHLKRHYRS-HTN 27 (60)
T ss_dssp CB-CCTTTC-CCBSCHHHHHHHHHT-TTS
T ss_pred cC-cCCCCc-cccCCHHHHHHHHHH-hCC
Confidence 89 999999 999999999999764 643
No 163
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.34 E-value=0.024 Score=41.02 Aligned_cols=28 Identities=18% Similarity=0.127 Sum_probs=20.6
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
..|| .|.+|| ..|.+...|.+|...+|.
T Consensus 60 ~k~~-~C~~Cg-k~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 60 QEMF-TCHHCG-KQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp CCCC-CCSSSC-CCCSSHHHHHHHHHHHTC
T ss_pred CCCe-ECCCCC-CeeCCHHHHHHHhHHhcC
Confidence 4677 788888 777777788877666664
No 164
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=94.30 E-value=0.17 Score=40.55 Aligned_cols=71 Identities=7% Similarity=-0.032 Sum_probs=51.1
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCC-cchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDD-SDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDD-SDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++++.|+.+..+....+. .-.....+.|-.+++|.|++.+.+ +++..+++.+.+.|+.+|++|...
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 99 (293)
T 3l6u_A 28 NAFKAEAKANKYEALVATSQNSR---ISEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMI 99 (293)
T ss_dssp HHHHHHHHHTTCEEEEEECSSCH---HHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEECCCCCH---HHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecCCC
Confidence 46778888899988866544333 222333333446899999998754 455689999999999999998764
No 165
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=94.28 E-value=0.1 Score=41.36 Aligned_cols=71 Identities=13% Similarity=-0.046 Sum_probs=52.6
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++++.|+.+.......+. .-...+.+.+.++++|.|++.+.++.-...++.+++.|+.+|+++...
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 92 (272)
T 3o74_A 22 KQLEQGARARGYQLLIASSDDQP---DSERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRRL 92 (272)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCH---HHHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEEEccCC
Confidence 46777888899988866544333 333444455557899999999877545778889999999999999763
No 166
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=94.24 E-value=0.082 Score=42.40 Aligned_cols=74 Identities=4% Similarity=-0.158 Sum_probs=51.5
Q ss_pred Cchhhhhhhh-cEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRV-WFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRA-Gv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..+++.. |+.|....-.....|..-...+.+.+..+++|.|++++-+++ +..+++.+.+.|+.+|+|+...
T Consensus 29 ~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 104 (304)
T 3gbv_A 29 KGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDSQI 104 (304)
T ss_dssp HHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESSCC
T ss_pred HHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4677777877 777775432111122233334444455789999999988774 7889999999999999999763
No 167
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.17 E-value=0.04 Score=38.89 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=17.7
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
...|| .|.+|| ..|.+...|.+|.+.-|..
T Consensus 62 ~~~~~-~C~~C~-~~f~~~~~l~~H~~~~~~~ 91 (110)
T 2csh_A 62 GIKPY-ECNICA-KRFMWRDSFHRHVTSCTKS 91 (110)
T ss_dssp CCCCE-ECSSSC-CEESCHHHHHHHHHHHHHH
T ss_pred CCCCe-eCCCCc-chhcCHHHHHHHHHHcccc
Confidence 34456 666666 6666666666666555443
No 168
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=94.15 E-value=0.018 Score=36.04 Aligned_cols=26 Identities=19% Similarity=0.364 Sum_probs=22.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
....|| .|.+|| ..|.+...|..|.+
T Consensus 25 ~~~~~~-~C~~C~-~~f~~~~~l~~H~~ 50 (57)
T 1bbo_A 25 TDVRPY-HCTYCN-FSFKTKGNLTKHMK 50 (57)
T ss_dssp SSCCCE-ECSSSS-CEESSHHHHHHHHH
T ss_pred CCCCCc-cCCCCC-chhcCHHHHHHHHH
Confidence 345789 999999 99999999999965
No 169
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=94.08 E-value=0.21 Score=40.81 Aligned_cols=71 Identities=18% Similarity=0.081 Sum_probs=52.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..+++..|+.+.......+. .....+.+.|-.+++|.|++.+.+++ +..+++.+++.|+.+|+++...
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 93 (313)
T 3m9w_A 22 DIFVKKAESLGAKVFVQSANGNE---ETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMI 93 (313)
T ss_dssp HHHHHHHHHTSCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEECCCCCH---HHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCcC
Confidence 46788889999988865443222 33344444454689999999987654 5889999999999999998763
No 170
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.07 E-value=0.018 Score=40.96 Aligned_cols=26 Identities=12% Similarity=-0.017 Sum_probs=17.9
Q ss_pred CCcccccccCCCcccCchHHHHHHHHHh
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
.|| .|.+|| ..|.+...|.+|.+.-|
T Consensus 53 ~~~-~C~~C~-k~F~~~~~L~~H~~~h~ 78 (98)
T 2gqj_A 53 DAL-KCQHCR-KQFKSKAGLNYHTMAEH 78 (98)
T ss_dssp HHH-SCSSSC-CCCSCHHHHHHHHHHHS
T ss_pred CCE-ECCCCC-CccCCHHHHHHHHHHHc
Confidence 367 777777 77777777777765444
No 171
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=93.99 E-value=0.016 Score=31.10 Aligned_cols=22 Identities=27% Similarity=0.283 Sum_probs=20.1
Q ss_pred Cccccc--ccCCCcccCchHHHHHHH
Q 046085 31 PYVLVI--VEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 31 py~~C~--VCGdrkf~t~~kL~kHFk 54 (230)
|| .|. .|| ..|.+...|..|.+
T Consensus 2 ~~-~C~~~~C~-k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 2 VY-VCHFENCG-RSFNDRRKLNRHKK 25 (29)
T ss_dssp CE-EECSTTTC-EEESSHHHHHHHHG
T ss_pred CC-CCcCCcCc-CccCCHHHHHHHHH
Confidence 78 999 999 99999999999954
No 172
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=93.98 E-value=0.23 Score=39.63 Aligned_cols=70 Identities=6% Similarity=-0.071 Sum_probs=52.1
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc----chHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS----DFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS----DF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+......... .-.....+.|..+++|.|++.+.++ .-..+++.+++.|..+|+++..
T Consensus 35 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 108 (298)
T 3tb6_A 35 RGIESYLSEQGYSMLLTSTNNNP---DNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINAS 108 (298)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCh---HHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecC
Confidence 37888899999999866544332 3334444445478999999998765 3457889999999999999876
No 173
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.95 E-value=0.029 Score=37.15 Aligned_cols=24 Identities=29% Similarity=0.519 Sum_probs=15.9
Q ss_pred CCCcccccccCCCcccCchHHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
..|| .|.+|| ..|.+...|.+|.+
T Consensus 40 ~~~~-~C~~C~-~~f~~~~~L~~H~~ 63 (72)
T 1x6e_A 40 EKPY-KCLECG-KAFSQNSGLINHQR 63 (72)
T ss_dssp SCCE-ECSSSC-CEESSHHHHHHHHH
T ss_pred CCCe-ECCCCC-cccCCHHHHHHHHH
Confidence 4566 677777 66777777776654
No 174
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=93.86 E-value=0.17 Score=40.49 Aligned_cols=71 Identities=4% Similarity=-0.081 Sum_probs=52.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++++.|+.+.......+. .-...+.+.+-.+++|.|++.+.++ .....++.+.+.|+.+|+++...
T Consensus 25 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (291)
T 3l49_A 25 QAQIAEIERLGGTAIALDAGRND---QTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTAT 96 (291)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHHcCCEEEEEcCCCCH---HHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCC
Confidence 46778888999999866443333 2233344444468999999998774 57789999999999999998764
No 175
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.83 E-value=0.011 Score=39.59 Aligned_cols=23 Identities=22% Similarity=0.385 Sum_probs=13.5
Q ss_pred CCCcccccccCCCcccCchHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHF 53 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHF 53 (230)
..|| .|.+|| ..|.+...|.+|.
T Consensus 44 ~~~~-~C~~C~-~~f~~~~~L~~H~ 66 (77)
T 2cot_A 44 EKPY-KCDECG-KAFIQRSHLIGHH 66 (77)
T ss_dssp SCSE-ECSSSC-CEESSHHHHHHHG
T ss_pred CcCe-eCCCCC-CccCCHHHHHHHH
Confidence 3455 666666 6666666666664
No 176
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=93.80 E-value=0.18 Score=39.86 Aligned_cols=73 Identities=10% Similarity=0.017 Sum_probs=51.6
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcC-cceEEEEcCCc-chHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRR-FGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~-vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~~ 177 (230)
-|+..+++..|+.+..+... ...|.+-...+.+.+-.++ +|.|++.+-++ .....++.+.+.|+.+|+++...
T Consensus 20 ~gi~~~~~~~g~~~~~~~~~-~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~ 94 (276)
T 3ksm_A 20 LGAQKAADEAGVTLLHRSTK-DDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDL 94 (276)
T ss_dssp HHHHHHHHHHTCEEEECCCS-STTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEECCC-CCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 36778888899999866421 1122233333444444678 99999998654 57789999999999999998763
No 177
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=93.79 E-value=0.042 Score=37.75 Aligned_cols=25 Identities=28% Similarity=0.341 Sum_probs=21.6
Q ss_pred CCCCcccccccCCCcccCchHHHHHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
...|| .|.+|| ..|.+...|.+|.+
T Consensus 72 ~~~~~-~C~~C~-~~f~~~~~l~~H~~ 96 (100)
T 2ebt_A 72 GAKPF-QCGVCN-RSFSRSDHLALHMK 96 (100)
T ss_dssp SCCSC-BCSSSC-CBCSSHHHHHHHHH
T ss_pred CCCCe-ECCCCc-CccCCHHHHHHHHH
Confidence 45689 999999 99999999999965
No 178
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.78 E-value=0.061 Score=38.09 Aligned_cols=30 Identities=7% Similarity=-0.041 Sum_probs=25.4
Q ss_pred CCCCCcccccccCCCccc-CchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLY-NNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~-t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|. +...|..|.+. |..
T Consensus 20 ~~~~~~-~C~~C~-k~f~~~~~~L~~H~~~-h~~ 50 (98)
T 2gqj_A 20 HERGEA-VCPTCN-VVTRKTLVGLKKHMEV-CQK 50 (98)
T ss_dssp TTTSCC-CCTTTC-CCCSSCSHHHHHHHHH-HHH
T ss_pred ccCCCc-CCCCCC-CChhhhHHHHHHHHHH-HcC
Confidence 456899 999999 9999 99999999865 543
No 179
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=93.75 E-value=0.21 Score=41.75 Aligned_cols=72 Identities=7% Similarity=0.018 Sum_probs=52.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhh-cCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDK-RRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~-r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..+++..|+.+..+....+.+. -...+.+++.. .++|.|+++++++....+++.+.+.|+.+|+|+...
T Consensus 24 ~g~~~~a~~~g~~~~~~~~~~~~~~--~~~~i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (350)
T 3h75_A 24 QFMQAAARDLGLDLRILYAERDPQN--TLQQARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPL 96 (350)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHHH--HHHHHHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESCC
T ss_pred HHHHHHHHHcCCeEEEEECCCCHHH--HHHHHHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCCC
Confidence 3677888888999886644333321 12334444532 599999999877778889999999999999999873
No 180
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.72 E-value=0.042 Score=39.75 Aligned_cols=33 Identities=21% Similarity=0.298 Sum_probs=28.3
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKREQK 62 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeREr~ 62 (230)
....|| .|.+|| ..|.....|..|.+ +|..|+.
T Consensus 21 ~~~kpy-~C~~C~-k~F~~~~~L~~H~~-~Ht~ekp 53 (88)
T 1x6f_A 21 LQNSTY-QCKHCD-SKLQSTAELTSHLN-IHNEEFQ 53 (88)
T ss_dssp CCCSCE-ECSSSC-CEESSHHHHHHHHH-HHHHHHH
T ss_pred CCCCCC-cCCCCC-CEeCCHHHHHHHHH-HhCCCCC
Confidence 456799 999999 99999999999975 6877754
No 181
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.67 E-value=0.039 Score=36.87 Aligned_cols=30 Identities=13% Similarity=0.094 Sum_probs=25.1
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
....|| .|.+|| ..|.+...|..|.+ +|..
T Consensus 3 ~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~h~~ 32 (78)
T 2d9h_A 3 SGSSGL-QCEICG-FTCRQKASLNWHQR-KHAE 32 (78)
T ss_dssp CSCCCE-ECSSSC-CEESSHHHHHHHHH-HHHH
T ss_pred CCCcCe-ECCCCC-CeeCCHHHHHHHHH-Hhhc
Confidence 356799 999999 99999999999975 4543
No 182
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=93.64 E-value=0.051 Score=36.03 Aligned_cols=32 Identities=25% Similarity=0.388 Sum_probs=26.4
Q ss_pred cCCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 26 IRPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 26 i~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
-....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 40 H~~~~~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 71 (74)
T 2lce_A 40 HTGEKPY-RCNICG-AQFNRPANLKTHTR-IHSGE 71 (74)
T ss_dssp HCCCCSE-ECTTTC-CEESCHHHHHHHHH-HHCCS
T ss_pred cCCCCCE-ECCCCC-chhCCHHHHHHHHH-hcCCC
Confidence 4567899 999999 99999999999975 56433
No 183
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=93.63 E-value=0.18 Score=40.41 Aligned_cols=69 Identities=10% Similarity=0.090 Sum_probs=52.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++.+.|+.+......... .....+.+.+..+++|.|++++.+.+ ...++.+.+.|+.+|+|+..
T Consensus 33 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 101 (292)
T 3k4h_A 33 RGISSFAHVEGYALYMSTGETEE---EIFNGVVKMVQGRQIGGIILLYSREN-DRIIQYLHEQNFPFVLIGKP 101 (292)
T ss_dssp HHHHHHHHHTTCEEEECCCCSHH---HHHHHHHHHHHTTCCCEEEESCCBTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCCCH---HHHHHHHHHHHcCCCCEEEEeCCCCC-hHHHHHHHHCCCCEEEECCC
Confidence 47788899999999866544333 34455566666789999999875543 37888999999999999876
No 184
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=93.63 E-value=0.3 Score=39.23 Aligned_cols=70 Identities=6% Similarity=0.037 Sum_probs=48.2
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+......-+ ......+.+.+...++|.|++.+.++ ++..+++.+++.|+.+|+++..
T Consensus 22 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (290)
T 2fn9_A 22 ETAKQRAEQLGYEATIFDSQND---TAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRG 92 (290)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCCCCC---HHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 3666777888888775443222 22233333444468999999987654 4667899999999999999875
No 185
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=93.62 E-value=0.28 Score=39.59 Aligned_cols=68 Identities=13% Similarity=-0.072 Sum_probs=49.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGY 175 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd 175 (230)
.|+..+++..|+.+..+.. . |..-.....+.|-.+++|.|++.+.+++ ...+++.+.+.|+.+|+++.
T Consensus 22 ~gi~~~a~~~g~~~~~~~~-~---~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 90 (306)
T 8abp_A 22 KFADKAGKDLGFEVIKIAV-P---DGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDD 90 (306)
T ss_dssp HHHHHHHHHHTEEEEEEEC-C---SHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHHcCCEEEEeCC-C---CHHHHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHHHCCCcEEEeCC
Confidence 3677788888999876544 2 2233334444444689999999987765 45679999999999999994
No 186
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=93.60 E-value=0.025 Score=37.22 Aligned_cols=24 Identities=17% Similarity=0.351 Sum_probs=19.3
Q ss_pred CCCcccccccCCCcccCchHHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
..|| .|.+|| ..|.+...|..|.+
T Consensus 47 ~~~~-~C~~C~-~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 47 QKPF-QCRICM-RNFSRSDHLTTHIR 70 (73)
T ss_dssp CCCE-ECTTTC-CEESCHHHHHHHHT
T ss_pred CCCe-ECCCCC-chhCCHHHHHHHHH
Confidence 4678 888888 88888888888854
No 187
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=93.59 E-value=0.027 Score=39.42 Aligned_cols=23 Identities=17% Similarity=0.234 Sum_probs=12.7
Q ss_pred CCCcccccccCCCcccCchHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHF 53 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHF 53 (230)
..|| .|.+|| ..|.+...|.+|.
T Consensus 71 ~~~~-~C~~C~-~~f~~~~~L~~H~ 93 (106)
T 2ee8_A 71 EKPF-KCQECG-KGFCQSRTLAVHK 93 (106)
T ss_dssp CCTT-SCSSSC-CCCSSHHHHHHHH
T ss_pred CCCe-ECCCcC-CcccCHHHHHHHH
Confidence 3455 555555 5555555555554
No 188
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.57 E-value=0.033 Score=41.70 Aligned_cols=29 Identities=10% Similarity=0.052 Sum_probs=20.9
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHh
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
+...|| .|..|| ..|.+...|..|.+.+|
T Consensus 14 ~gekpy-~C~~Cg-k~F~~~~~L~~H~r~~H 42 (102)
T 2ghf_A 14 KVEGGY-ECKYCT-FQTPDLNMFTFHVDSEH 42 (102)
T ss_dssp CCCSSE-ECSSCS-CEESCHHHHHHHHHHHC
T ss_pred CCCcCc-CCCCCC-CccCCHHHHHHHHHhhC
Confidence 345677 777777 77777777777776666
No 189
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.55 E-value=0.038 Score=36.63 Aligned_cols=30 Identities=23% Similarity=0.372 Sum_probs=25.5
Q ss_pred cCCCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 26 IRPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 26 i~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
-....|| .|.+|| ..|.+...|..|.+ +|.
T Consensus 9 H~~~k~~-~C~~C~-k~f~~~~~L~~H~~-~h~ 38 (72)
T 1x6e_A 9 HSGEKPY-GCVECG-KAFSRSSILVQHQR-VHT 38 (72)
T ss_dssp TTTCCCE-ECSSSC-CEESSHHHHHHHHH-GGG
T ss_pred cCCCCCc-cCCCCC-CccCCHHHHHHHHH-hcC
Confidence 3567899 999999 99999999999976 454
No 190
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=93.53 E-value=0.18 Score=41.21 Aligned_cols=69 Identities=7% Similarity=-0.031 Sum_probs=52.5
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+.......+. .....+.+.|..+++|.|++++.+.+ ...+..+.+.|+.+|+||..
T Consensus 47 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 115 (305)
T 3huu_A 47 NGINQACNVRGYSTRMTVSENSG---DLYHEVKTMIQSKSVDGFILLYSLKD-DPIEHLLNEFKVPYLIVGKS 115 (305)
T ss_dssp HHHHHHHHHHTCEEEECCCSSHH---HHHHHHHHHHHTTCCSEEEESSCBTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCh---HHHHHHHHHHHhCCCCEEEEeCCcCC-cHHHHHHHHcCCCEEEECCC
Confidence 47888999999999866544332 34455666666799999999875543 27788899999999999976
No 191
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=93.52 E-value=0.2 Score=40.72 Aligned_cols=70 Identities=10% Similarity=0.012 Sum_probs=49.4
Q ss_pred CchhhhhhhhcEEEEEcc--ccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMS--DKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~--dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.... ..- |......+.+.|..+++|.|++++.+++ +...++.+++.|+.+|+++..
T Consensus 21 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (288)
T 1gud_A 21 KGIEDEAKTLGVSVDIFASPSEG---DFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 93 (288)
T ss_dssp HHHHHHHHHHTCCEEEEECSSTT---CHHHHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHHHHHTTCEEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCCCCCC---CHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEECCC
Confidence 477888999998887543 211 2223333444444689999999876654 567889999999999999865
No 192
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=93.51 E-value=0.29 Score=39.59 Aligned_cols=72 Identities=6% Similarity=-0.047 Sum_probs=51.5
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..+++..|+.+..+.+.. .|..-...+.+.+-.+++|.|++.+-++ .+...++.+.+.|+.+|+++...
T Consensus 24 ~gi~~~a~~~g~~~~~~~~~~--~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 96 (305)
T 3g1w_A 24 KGFEDAAQALNVTVEYRGAAQ--YDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGA 96 (305)
T ss_dssp HHHHHHHHHHTCEEEEEECSS--SCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEeCCCc--CCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECCCC
Confidence 477888899999998633211 1223333444444468999999987655 47889999999999999999763
No 193
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.51 E-value=0.029 Score=37.50 Aligned_cols=26 Identities=8% Similarity=0.198 Sum_probs=23.0
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQI 56 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkql 56 (230)
+.|| .|.+|| ..|.+...|..|.+.-
T Consensus 45 ~~~~-~C~~C~-~~f~~~~~L~~H~~~h 70 (86)
T 1x6h_A 45 PAAF-VCSKCG-KTFTRRNTMARHADNC 70 (86)
T ss_dssp CCCE-ECSSSC-CEESCHHHHHHHHHHC
T ss_pred Ccce-ECCCCC-ChhCCHHHHHHHHHHc
Confidence 4689 999999 9999999999998643
No 194
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=93.46 E-value=0.3 Score=40.01 Aligned_cols=71 Identities=15% Similarity=0.091 Sum_probs=52.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..+++..|+.+.......+. .-.....+.|-.+++|.|++.+-++ .+...++.+.+.|+.+|+|+...
T Consensus 23 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 94 (330)
T 3uug_A 23 NNIVKQLQEAGYKTDLQYADDDI---PNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLI 94 (330)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEeeCCCCH---HHHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCCC
Confidence 46778888899988865533222 3333334444468999999998776 57899999999999999998764
No 195
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=93.42 E-value=0.018 Score=43.14 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=27.6
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKREQ 61 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeREr 61 (230)
...|| .|..|| ..|.+...|..|-..+|..|+
T Consensus 47 ~ekpf-~C~~Cg-k~F~~~~~L~~H~~r~Htgek 78 (102)
T 2ghf_A 47 LNSSY-VCVECN-FLTKRYDALSEHNLKYHPGEE 78 (102)
T ss_dssp CSCCE-EETTTT-EEESSTHHHHTHHHHTSTTCC
T ss_pred CCCCc-CCCCCC-cccCCHHHHHHHHHHhcCCCC
Confidence 45689 999999 999999999999767887654
No 196
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=93.41 E-value=0.039 Score=36.41 Aligned_cols=25 Identities=20% Similarity=0.292 Sum_probs=18.5
Q ss_pred CCCCcccccccCCCcccCchHHHHHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
...|| .|.+|| ..|.+...|.+|.+
T Consensus 54 ~~~~~-~C~~C~-~~f~~~~~l~~H~~ 78 (82)
T 2kmk_A 54 GEKPH-KCQVCG-KAFSQSSNLITHSR 78 (82)
T ss_dssp TCCCE-ECTTTS-CEESSHHHHHHHHH
T ss_pred CCCCC-cCCCcc-hhhCChHHHHHHHH
Confidence 34577 788888 78888888887764
No 197
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=93.39 E-value=0.29 Score=39.24 Aligned_cols=70 Identities=10% Similarity=-0.004 Sum_probs=49.2
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. .-...+.+.+..+++|.|++.+.+++ ....++.+++.|+.+|+++..
T Consensus 21 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~i~~~ 91 (271)
T 2dri_A 21 DGAQKEADKLGYNLVVLDSQNNP---AKELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQ 91 (271)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCH---HHHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCcEEEEeCCCCCH---HHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCcEEEecCC
Confidence 47778888999888754322222 22333444454689999999876544 457889999999999999875
No 198
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=93.26 E-value=0.29 Score=39.90 Aligned_cols=70 Identities=10% Similarity=0.037 Sum_probs=51.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++++.|+.+....... |......+.+.+..+++|.|++++.+.+ ..+++.+.+.|+.+|+||...
T Consensus 32 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 101 (295)
T 3hcw_A 32 LGISETCNQHGYGTQTTVSNN---MNDLMDEVYKMIKQRMVDAFILLYSKEN-DPIKQMLIDESMPFIVIGKPT 101 (295)
T ss_dssp HHHHHHHHTTTCEEEECCCCS---HHHHHHHHHHHHHTTCCSEEEESCCCTT-CHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHHCCCEEEEEcCCC---ChHHHHHHHHHHHhCCcCEEEEcCcccC-hHHHHHHHhCCCCEEEECCCC
Confidence 467888999999988655433 2344455666666799999999865543 367888899999999999763
No 199
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=93.24 E-value=0.37 Score=40.09 Aligned_cols=70 Identities=7% Similarity=-0.105 Sum_probs=52.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. .....+.+.|..+++|.|++.+.+.+-..+...+.+.++.+|+++..
T Consensus 83 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~ 152 (338)
T 3dbi_A 83 FHAARMAEEKGRQLLLADGKHSA---EEERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRR 152 (338)
T ss_dssp HHHHHHHHHTTCEEEEEECTTSH---HHHHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCh---HHHHHHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcCC
Confidence 47788999999998866543332 22333445555789999999998877777888999999999999876
No 200
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=93.23 E-value=0.051 Score=37.21 Aligned_cols=29 Identities=17% Similarity=0.245 Sum_probs=24.6
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
...|| .|.+|| ..|.+...|..|.+.-|.
T Consensus 28 ~~~~~-~C~~C~-k~f~~~~~L~~H~~~h~~ 56 (88)
T 1llm_C 28 GEKPF-ACDICG-RKFARSDERKRHRDIQHI 56 (88)
T ss_dssp CCCCE-ECTTTC-CEESSHHHHHHHHHHHTH
T ss_pred CCCCc-cCCCCC-CccCCHHHHHHHHHHhCC
Confidence 35689 999999 999999999999887774
No 201
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=92.96 E-value=0.43 Score=37.05 Aligned_cols=74 Identities=20% Similarity=0.090 Sum_probs=50.9
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLK 182 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~ 182 (230)
++..|.+.|..|..+++.+.. . . .....+ ..=|+++++|-. .+...+++.|+++|+++|+|-+.....|.
T Consensus 57 ~~~~l~~~g~~~~~~~~~~~~--~--~-~~~~~~--~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~ 129 (187)
T 3sho_A 57 LGHGLNSLGIRTTVLTEGGST--L--T-ITLANL--RPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPA 129 (187)
T ss_dssp HHHHHHHTTCCEEEECCCTHH--H--H-HHHHTC--CTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred HHHHHHhcCCCEEEecCCchh--H--H-HHHhcC--CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCCcch
Confidence 456678999999988732221 1 1 111122 123677777653 35567789999999999999998667899
Q ss_pred hhhh
Q 046085 183 RIAD 186 (230)
Q Consensus 183 r~AD 186 (230)
+.||
T Consensus 130 ~~ad 133 (187)
T 3sho_A 130 RIAD 133 (187)
T ss_dssp HHCS
T ss_pred hhCc
Confidence 9999
No 202
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.95 E-value=0.04 Score=36.50 Aligned_cols=28 Identities=18% Similarity=0.268 Sum_probs=21.2
Q ss_pred CCCCcccccc--cCCCcccCchHHHHHHHHHhH
Q 046085 28 PAEPYVLVIV--EGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 28 p~epy~~C~V--CGdrkf~t~~kL~kHFkqlHe 58 (230)
...|| .|.+ || ..|.+...|..|.+ +|.
T Consensus 35 ~~~~~-~C~~~~C~-k~f~~~~~L~~H~~-~H~ 64 (79)
T 2dlk_A 35 HQKSF-SCPEPACG-KSFNFKKHLKEHMK-LHS 64 (79)
T ss_dssp SCCCE-ECSCTTTC-CEESSHHHHHHHHH-HHH
T ss_pred CCCCe-ECCCCCCc-CccCCHHHHHHHHH-HhC
Confidence 35678 8887 88 88888888888875 564
No 203
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=92.88 E-value=0.034 Score=38.10 Aligned_cols=28 Identities=21% Similarity=0.400 Sum_probs=24.0
Q ss_pred CCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
.|| .|.+|| ..|.+...|..|.+ +|..+
T Consensus 2 k~~-~C~~C~-k~f~~~~~L~~H~~-~H~~~ 29 (88)
T 1llm_C 2 KPF-QCRICM-RNFSRSDHLTTHIR-THTGE 29 (88)
T ss_dssp CCE-ECTTTC-CEESCHHHHHHHHH-HHHCC
T ss_pred CCC-cCCCCC-CccCCHHHHHHHHH-HcCCC
Confidence 589 999999 99999999999976 46543
No 204
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=92.84 E-value=0.37 Score=39.14 Aligned_cols=69 Identities=9% Similarity=-0.004 Sum_probs=47.4
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+.......+. .-...+.+.|..+++|.|++.+.+.+ ...++.+.+.|+.+|+++..
T Consensus 36 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 104 (289)
T 2fep_A 36 RGIEDIATMYKYNIILSNSDQNM---EKELHLLNTMLGKQVDGIVFMGGNIT-DEHVAEFKRSPVPIVLAASV 104 (289)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHHSSSCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCCCH---HHHHHHHHHHHhCCCCEEEEecCCCC-HHHHHHHHhcCCCEEEEccc
Confidence 46777888888887754332222 22333444444689999999886544 56788888999999999875
No 205
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=92.81 E-value=0.29 Score=40.02 Aligned_cols=70 Identities=7% Similarity=-0.053 Sum_probs=49.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. .-...+.+.|..+++|.|++.+.+.+ +..+++.+.+.|+.+|+++..
T Consensus 22 ~gi~~~a~~~g~~l~~~~~~~~~---~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (306)
T 2vk2_A 22 NVAKSEAEKRGITLKIADGQQKQ---ENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRS 92 (306)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCH---HHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCCCCCH---HHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHHCCCCEEEecCC
Confidence 46677888889888755432222 22233334444689999999887654 568899999999999999875
No 206
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.79 E-value=0.085 Score=37.20 Aligned_cols=28 Identities=14% Similarity=0.008 Sum_probs=22.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHh
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
....|| .|.+|| ..|.+...|..|.+. |
T Consensus 12 ~~~~~~-~C~~C~-~~f~~~~~l~~H~~~-H 39 (107)
T 1wjp_A 12 ENKEVY-QCRLCN-AKLSSLLEQGSHERL-C 39 (107)
T ss_dssp CCCCCC-BCTTTC-CBCSSHHHHHHHHHH-H
T ss_pred CCCcCe-ECCCCC-CccCCHHHHHHHHHH-C
Confidence 456788 899999 888888889888764 6
No 207
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=92.67 E-value=0.43 Score=39.65 Aligned_cols=70 Identities=13% Similarity=0.008 Sum_probs=49.5
Q ss_pred CchhhhhhhhcEEEEEcc-ccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMS-DKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~-dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~ 176 (230)
-|+..+++..|+.+.... ... |.+......+.|-.++++.|++++-|++ ...+++.|+++|+.+|.++..
T Consensus 23 ~g~~~~~~~~g~~~~~~~~~~~---d~~~q~~~i~~li~~~vdgiii~~~~~~~~~~~~~~a~~~gipvV~~d~~ 94 (316)
T 1tjy_A 23 NGAQEAGKALGIDVTYDGPTEP---SVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSD 94 (316)
T ss_dssp HHHHHHHHHHTCEEEECCCSSC---CHHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESSC
T ss_pred HHHHHHHHHhCCEEEEECCCCC---CHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCcCEEEEecCC
Confidence 466677888898887542 222 2233333344444689999999887765 578999999999999999754
No 208
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=92.61 E-value=0.025 Score=35.13 Aligned_cols=30 Identities=10% Similarity=0.214 Sum_probs=24.3
Q ss_pred CCCCccccc--ccCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVI--VEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~--VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...|| .|. .|| ..|.....|..|.+ +|..|
T Consensus 15 ~~k~~-~C~~~~C~-k~F~~~~~L~~H~~-~H~~e 46 (47)
T 1ncs_A 15 PDKTF-ECLFPGCT-KTFKRRYNIRSHIQ-THLED 46 (47)
T ss_dssp TTTEE-ECCCTTCC-CEECSSSSHHHHHH-HHTTT
T ss_pred CCCCe-ECCCCCCC-CccCCHHHHHHHHH-HccCC
Confidence 46789 995 799 99999999999965 46543
No 209
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=92.56 E-value=0.37 Score=38.26 Aligned_cols=69 Identities=7% Similarity=-0.048 Sum_probs=47.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+.......+. .....+.+.+..+++|.|++.+.+.+ ..+++.+.+.|+.+|+++..
T Consensus 23 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 91 (275)
T 3d8u_A 23 PSFQQALNKAGYQLLLGYSDYSI---EQEEKLLSTFLESRPAGVVLFGSEHS-QRTHQLLEASNTPVLEIAEL 91 (275)
T ss_dssp HHHHHHHHHTSCEECCEECTTCH---HHHHHHHHHHHTSCCCCEEEESSCCC-HHHHHHHHHHTCCEEEESSS
T ss_pred HHHHHHHHHCCCEEEEEcCCCCH---HHHHHHHHHHHhcCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEeec
Confidence 46777888889887644322222 22333444444689999999886654 46788888899999999865
No 210
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=92.55 E-value=0.068 Score=38.84 Aligned_cols=24 Identities=8% Similarity=0.163 Sum_probs=16.2
Q ss_pred CCCcccccccCCCcccCchHHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
..|| .|.+|| ..|.+...|..|.+
T Consensus 72 ~~~~-~C~~C~-k~f~~~~~l~~H~~ 95 (129)
T 2wbt_A 72 ISQF-VCPLCL-MPFSSSVSLKQHIR 95 (129)
T ss_dssp HCSE-ECTTTC-CEESSHHHHHHHHH
T ss_pred CCCe-ECCCCC-cccCCHhHHHHHHH
Confidence 4566 777777 77777777777764
No 211
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=92.54 E-value=0.33 Score=39.31 Aligned_cols=69 Identities=19% Similarity=0.055 Sum_probs=47.4
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHH---HHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNY---MVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~---m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+.......+. .-... +.+.+..+++|.|++.+.+.+ ...+..+++.|+.+|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 99 (290)
T 2rgy_A 28 KQTDLELRAVHRHVVVATGCGES---TPREQALEAVRFLIGRDCDGVVVISHDLH-DEDLDELHRMHPKMVFLNRA 99 (290)
T ss_dssp HHHHHHHHHTTCEEEEECCCSSS---CHHHHHHHHHHHHHHTTCSEEEECCSSSC-HHHHHHHHHHCSSEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCch---hhhhhHHHHHHHHHhcCccEEEEecCCCC-HHHHHHHhhcCCCEEEEccc
Confidence 46777888889887754332221 11122 333344689999999887665 56788888899999999875
No 212
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=92.46 E-value=0.35 Score=39.67 Aligned_cols=70 Identities=9% Similarity=0.004 Sum_probs=48.0
Q ss_pred CchhhhhhhhcEEEEEcc-ccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMS-DKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~-dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+..+. +.. |.+-...+.+.|-.+++|.|++.+.++ .+...++.+.+.|+.+|+++..
T Consensus 20 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (313)
T 2h3h_A 20 QGVKAAGKALGVDTKFFVPQKE---DINAQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLDTD 91 (313)
T ss_dssp HHHHHHHHHHTCEEEEECCSSS---CHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEECCCCC---CHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEeCCC
Confidence 366677778898887543 222 222223333333368999999987655 4678899999999999999875
No 213
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=92.44 E-value=0.051 Score=41.67 Aligned_cols=28 Identities=21% Similarity=0.400 Sum_probs=19.2
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
..|| .|.+|| ..|.+...|..|.+..|.
T Consensus 76 ~k~~-~C~~C~-k~F~~~~~L~~H~~~hh~ 103 (133)
T 2lt7_A 76 ERRY-QCLACG-KSFINYQFMSSHIKSVHS 103 (133)
T ss_dssp CCCE-EESSSC-CEESSHHHHHHHHHHHTC
T ss_pred Cccc-cCCCCC-CCcCCHHHHHHHhHHhcC
Confidence 3466 777777 777777777777766664
No 214
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=92.37 E-value=0.44 Score=38.47 Aligned_cols=70 Identities=13% Similarity=0.059 Sum_probs=47.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+-......+. .-.....+.|-.+++|.|++.+.++ +....++.+++.|+.+|+++..
T Consensus 21 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (283)
T 2ioy_A 21 NGAEEKAKELGYKIIVEDSQNDS---SKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEANSKNIPVITIDRS 91 (283)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHhcCcEEEEecCCCCH---HHHHHHHHHHHHcCCCEEEEeCCchhhhHHHHHHHHHCCCeEEEecCC
Confidence 46777888889888755432222 2222223333368999999987654 4567889999999999999864
No 215
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=92.37 E-value=0.032 Score=42.87 Aligned_cols=31 Identities=29% Similarity=0.285 Sum_probs=22.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...-|| .|.+|| ..|.+...|..|.+ +|..|
T Consensus 18 ~Gek~y-~C~~C~-k~F~~~~~L~~H~~-~H~~~ 48 (133)
T 2lt7_A 18 DGRVYY-ICIVCK-RSYVCLTSLRRHFN-IHSWE 48 (133)
T ss_dssp TTEEEE-EETTTC-CEESCHHHHHHHHH-HHHCC
T ss_pred CCCcCe-ECCCCC-CCcCCHHHHHHHHH-HcCCC
Confidence 345678 888888 88888888888864 57543
No 216
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=92.28 E-value=0.17 Score=40.78 Aligned_cols=70 Identities=9% Similarity=0.018 Sum_probs=52.2
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++++.|+.+..+....+. .-...+.+.|..+++|.|++.+.+. ...+++.+.+.|+.+|+++...
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~~~~~~~iPvV~~~~~~ 97 (291)
T 3egc_A 28 SGVESEARHKGYSVLLANTAEDI---VREREAVGQFFERRVDGLILAPSEG-EHDYLRTELPKTFPIVAVNREL 97 (291)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEECCCSS-CCHHHHHSSCTTSCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCH---HHHHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHhhccCCCEEEEeccc
Confidence 46778889999998866543322 2334445555578999999998776 5678888999999999999873
No 217
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=92.20 E-value=0.4 Score=38.62 Aligned_cols=70 Identities=11% Similarity=-0.047 Sum_probs=48.5
Q ss_pred CchhhhhhhhcE-EEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWF-WVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv-~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+ .+....... |......+.+.|..+++|.|++.+.+.+ ...+++.+++.|+.+|+++..
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (309)
T 2fvy_A 22 KAIEQDAKAAPDVQLLMNDSQN---DQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKE 93 (309)
T ss_dssp HHHHHHHHTCTTEEEEEEECTT---CHHHHHHHHHHHHHTTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESSC
T ss_pred HHHHHHHHhcCCeEEEEecCCC---CHHHHHHHHHHHHHcCCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecCC
Confidence 466777888885 666443221 2233334444444689999999887665 467899999999999999875
No 218
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=92.15 E-value=0.065 Score=35.19 Aligned_cols=34 Identities=29% Similarity=0.456 Sum_probs=26.7
Q ss_pred cCccCCCCCcccccc--cCCCcccCchHHHHHHHHHhHH
Q 046085 23 KGVIRPAEPYVLVIV--EGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 23 ~g~i~p~epy~~C~V--CGdrkf~t~~kL~kHFkqlHeR 59 (230)
+.+.....|| .|++ || ..|.+...|..|.+ +|..
T Consensus 11 ~~~~~~~~~~-~C~~~~C~-k~f~~~~~l~~H~~-~h~~ 46 (73)
T 1f2i_G 11 NYVVPKMRPY-ACPVESCD-RRFSRSDELTRHIR-IHTG 46 (73)
T ss_dssp SCCCCCCCCE-ECSSTTBC-CEESSHHHHHHHHH-HHHC
T ss_pred hccCCCCCcc-CCcCCCCC-CccCCHHHHHHHHH-hhCC
Confidence 3445567889 9985 99 99999999999964 5653
No 219
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.14 E-value=0.043 Score=37.54 Aligned_cols=25 Identities=16% Similarity=0.278 Sum_probs=15.2
Q ss_pred CCCcccccccCCCcccCchHHHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQ 55 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkq 55 (230)
..|| .|.+|| ..|.+...|.+|.+.
T Consensus 34 ~~~~-~C~~C~-~~f~~~~~l~~H~~~ 58 (96)
T 2dmd_A 34 VKPY-KCKTCD-YAAADSSSLNKHLRI 58 (96)
T ss_dssp CCSE-ECSSSC-CEESSHHHHHHHHHH
T ss_pred CCCE-eCCCCC-CccCCHHHHHHHHHH
Confidence 4556 666666 666666666666543
No 220
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=92.06 E-value=0.076 Score=36.20 Aligned_cols=26 Identities=31% Similarity=0.562 Sum_probs=18.7
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQ 55 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkq 55 (230)
...|| .|.+|| ..|.+...|..|.+.
T Consensus 32 ~~~~~-~C~~C~-~~f~~~~~l~~H~~~ 57 (95)
T 2yt9_A 32 GEKPY-SCPVCG-LRFKRKDRMSYHVRS 57 (95)
T ss_dssp SSCSE-ECSSSC-CEESCHHHHHHHHHH
T ss_pred CCCCC-cCCCCC-CccCCHHHHHHHHHH
Confidence 44577 777777 777777777777643
No 221
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=92.06 E-value=0.085 Score=34.73 Aligned_cols=26 Identities=19% Similarity=0.250 Sum_probs=22.7
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQ 55 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkq 55 (230)
...|| .|.+|| ..|.+...|..|.+.
T Consensus 26 ~~~~~-~C~~C~-~~f~~~~~l~~H~~~ 51 (82)
T 2kmk_A 26 DTRPY-PCQYCG-KRFHQKSDMKKHTFI 51 (82)
T ss_dssp TCCCE-ECSSSC-CEESSHHHHHHHHHH
T ss_pred CCCCe-eCCcCC-hhhCCHHHHHHHHHH
Confidence 45789 999999 999999999999763
No 222
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=92.02 E-value=0.61 Score=39.26 Aligned_cols=69 Identities=13% Similarity=-0.009 Sum_probs=50.1
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++.+.|+.+.......+. .-...+.+.|..+++|.|++++.+.+ ...+..+.+.|+.+|+|++.
T Consensus 90 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~ 158 (355)
T 3e3m_A 90 QSLTDVLEQGGLQLLLGYTAYSP---EREEQLVETMLRRRPEAMVLSYDGHT-EQTIRLLQRASIPIVEIWEK 158 (355)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTCCSEEEEECSCCC-HHHHHHHHHCCSCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCh---HHHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEECCc
Confidence 47888999999998755432222 22234444455789999999987655 36788899999999999865
No 223
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=92.01 E-value=0.077 Score=35.39 Aligned_cols=29 Identities=21% Similarity=0.259 Sum_probs=24.5
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
....|| .|.+|| ..|.+...|..|.+ +|.
T Consensus 14 ~~~~~~-~C~~C~-~~f~~~~~l~~H~~-~h~ 42 (77)
T 2cot_A 14 RERRRY-KCDECG-KSFSHSSDLSKHRR-THT 42 (77)
T ss_dssp CCSCSS-BCSSSC-CBCSCHHHHHHHHT-TTC
T ss_pred CCCCCE-ECCCCC-cccCCHHHHHHHHH-HcC
Confidence 446799 999999 99999999999975 453
No 224
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=91.94 E-value=0.061 Score=35.58 Aligned_cols=31 Identities=19% Similarity=0.060 Sum_probs=26.1
Q ss_pred CCCCcccccc--cCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVIV--EGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~V--CGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...|| .|.. || ..|.+...|..|.+..|..+
T Consensus 4 ~~~~~-~C~~~~C~-~~f~~~~~L~~H~~~~H~~~ 36 (79)
T 2dlk_A 4 GSSGM-PCDFPGCG-RIFSNRQYLNHHKKYQHIHQ 36 (79)
T ss_dssp CCSSE-ECSSTTTC-CEESSHHHHHHHHHHGGGSC
T ss_pred CCCCc-cCCCCCCc-CccCCHHHHHHHHHHHhCCC
Confidence 35688 8887 99 99999999999998888643
No 225
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=91.87 E-value=0.76 Score=36.59 Aligned_cols=69 Identities=7% Similarity=-0.063 Sum_probs=47.1
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHH-cCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATL-RCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARe-r~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. .-...+.+.+..++++.|++.+.+.+ ...+..+.+ .|+.+|+++..
T Consensus 41 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 110 (296)
T 3brq_A 41 FHAARMAEEKGRQLLLADGKHSA---EEERQAIQYLLDLRCDAIMIYPRFLS-VDEIDDIIDAHSQPIMVLNRR 110 (296)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSH---HHHHHHHHHHHHTTCSEEEEECSSSC-HHHHHHHHHTCSSCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCH---HHHHHHHHHHHhcCCCEEEEecCCCC-hHHHHHHHhcCCCCEEEEccc
Confidence 46677788889888765443332 22233333344689999999876644 366788888 89999999865
No 226
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=91.80 E-value=0.38 Score=39.13 Aligned_cols=73 Identities=10% Similarity=-0.038 Sum_probs=51.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..+++..|+.+...... +..|..-.....+.|-.+++|.|++.+.++ .+...++.+++.|+.+|.++...
T Consensus 23 ~gi~~~a~~~g~~~~~~~~~-~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (297)
T 3rot_A 23 QGAKKAAEELKVDLQILAPP-GANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRP 96 (297)
T ss_dssp HHHHHHHHHHTCEEEEECCS-SSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCC
T ss_pred HHHHHHHHHhCcEEEEECCC-CcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 56778888899999865522 001222233334444468999999987554 46889999999999999998763
No 227
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.79 E-value=0.089 Score=37.33 Aligned_cols=27 Identities=11% Similarity=-0.015 Sum_probs=24.2
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQ 55 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkq 55 (230)
....|| .|.+|| ..|.+...|..|.+.
T Consensus 15 ~~~~~~-~C~~C~-k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 15 TGASKF-RCKDCS-AAYDTLVELTVHMNE 41 (115)
T ss_dssp CCCCSE-EBSSSS-CEESSHHHHHHHHHH
T ss_pred CCCCCE-ECCccC-chhcCHHHHHHHHHH
Confidence 456799 999999 999999999999874
No 228
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=91.66 E-value=0.4 Score=39.20 Aligned_cols=70 Identities=4% Similarity=-0.147 Sum_probs=50.3
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++++.|+.+.......+. .-...+.+.|..+++|.|++++.+.+-...+..+.+ |+.+|+||...
T Consensus 35 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~~ 104 (303)
T 3kke_A 35 SGVQMAASGHSTDVLLGQIDAPP---RGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSRV 104 (303)
T ss_dssp HHHHHHHHHTTCCEEEEECCSTT---HHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCh---HHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCcC
Confidence 47788889999988865544333 223445555657999999999876653327778888 99999998764
No 229
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.63 E-value=0.064 Score=35.12 Aligned_cols=26 Identities=12% Similarity=-0.054 Sum_probs=17.7
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQ 55 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkq 55 (230)
-|..|| .|..|| ..|. ...|.+|-+.
T Consensus 6 C~~~~~-~C~~C~-k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 6 SGKRTQ-PCTYCT-KEFV-FDTIQSHQYQ 31 (66)
T ss_dssp CCCCEE-ECSSSC-CEEE-HHHHHHHHHH
T ss_pred CCCCCe-eccccC-CccC-HHHHHHHHHH
Confidence 355677 777777 7777 7777777543
No 230
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=91.59 E-value=0.064 Score=43.02 Aligned_cols=32 Identities=9% Similarity=0.163 Sum_probs=25.7
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHKREQK 62 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHeREr~ 62 (230)
.-|| .|..|| +.|.+...|..|++.-.-+.+.
T Consensus 48 ekpf-yC~~C~-K~F~~~~~L~~H~rsK~HKrrv 79 (124)
T 1zr9_A 48 GGLH-RCLACA-RYFIDSTNLKTHFRSKDHKKRL 79 (124)
T ss_dssp GGCS-EETTTT-EECSSHHHHHHHTTCHHHHHHH
T ss_pred Ccce-EcccCc-chhCCHHHHHHHHhhhhhhHHH
Confidence 3588 999999 9999999999999865433333
No 231
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=91.52 E-value=0.51 Score=38.20 Aligned_cols=69 Identities=6% Similarity=0.007 Sum_probs=49.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+........... ...+.+++..+++|.|++++.+.+ ...++.+.+.|+.+|+||..
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~~~~---~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 98 (288)
T 3gv0_A 30 FGITEVLSTTQYHLVVTPHIHAKDS---MVPIRYILETGSADGVIISKIEPN-DPRVRFMTERNMPFVTHGRS 98 (288)
T ss_dssp HHHHHHHTTSSCEEEECCBSSGGGT---THHHHHHHHHTCCSEEEEESCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEecCCcchhH---HHHHHHHHHcCCccEEEEecCCCC-cHHHHHHhhCCCCEEEECCc
Confidence 3778889999999886654333211 223444455689999999875533 26788899999999999975
No 232
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=91.39 E-value=0.56 Score=39.17 Aligned_cols=68 Identities=4% Similarity=-0.191 Sum_probs=48.5
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
|+..++...|+.+.......+. .....+.+.|..+++|.|++++.+.+- ..+..+.+.|+.+|+||+.
T Consensus 89 gi~~~a~~~g~~~~~~~~~~~~---~~~~~~i~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~i~~~ 156 (344)
T 3kjx_A 89 GINQVLEDTELQPVVGVTDYLP---EKEEKVLYEMLSWRPSGVIIAGLEHSE-AARAMLDAAGIPVVEIMDS 156 (344)
T ss_dssp HHHHHHTSSSSEEEEEECTTCH---HHHHHHHHHHHTTCCSEEEEECSCCCH-HHHHHHHHCSSCEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEeCCCCH---HHHHHHHHHHHhCCCCEEEEECCCCCH-HHHHHHHhCCCCEEEEeCC
Confidence 7888899999988754332222 222344444557899999999766443 6788899999999999765
No 233
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.37 E-value=0.2 Score=34.11 Aligned_cols=25 Identities=32% Similarity=0.371 Sum_probs=18.7
Q ss_pred cccccccCCCcccCchHHHHHHHHHhHH
Q 046085 32 YVLVIVEGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 32 y~~C~VCGdrkf~t~~kL~kHFkqlHeR 59 (230)
| .|.+|| ..|.+...|..|.+ +|..
T Consensus 63 ~-~C~~C~-k~f~~~~~L~~H~~-~H~~ 87 (95)
T 2ej4_A 63 E-ECPREG-KSFKAKYKLVNHIR-VHTG 87 (95)
T ss_dssp T-TCSSTT-CCCSSHHHHHHHHH-HHHT
T ss_pred c-CCCCCC-cccCCHHHHHHHHH-hcCC
Confidence 6 788888 88888888888865 4643
No 234
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=91.30 E-value=0.47 Score=39.35 Aligned_cols=70 Identities=7% Similarity=-0.157 Sum_probs=48.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcC--cceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRR--FGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~--vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+.......+. .....+.+.|...+ +|.|++.+.+++ +..+++.+.+.|+.+|+++..
T Consensus 25 ~gi~~~a~~~g~~l~~~~~~~~~---~~~~~~i~~l~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 97 (332)
T 2rjo_A 25 KGAQSFAKSVGLPYVPLTTEGSS---EKGIADIRALLQKTGGNLVLNVDPNDSADARVIVEACSKAGAYVTTIWNK 97 (332)
T ss_dssp HHHHHHHHHHTCCEEEEECTTCH---HHHHHHHHHHHHHTTTCEEEEECCSSHHHHHHHHHHHHHHTCEEEEESCC
T ss_pred HHHHHHHHHcCCEEEEecCCCCH---HHHHHHHHHHHHCCCCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEECCC
Confidence 46777788888888755432222 22333334444578 999999887654 457889999999999999876
No 235
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=91.30 E-value=0.065 Score=35.98 Aligned_cols=23 Identities=17% Similarity=0.244 Sum_probs=15.5
Q ss_pred CCCcccccccCCCcccCchHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHF 53 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHF 53 (230)
..|| .|.+|| ..|.+...|..|.
T Consensus 63 ~~~~-~C~~C~-~~f~~~~~l~~H~ 85 (89)
T 2wbs_A 63 HRPF-QCQKCD-RAFSRSDHLALHM 85 (89)
T ss_dssp CCCE-ECSSSS-CEESSHHHHHHHG
T ss_pred CCCc-cCCCCC-cccCCHHHHHHHH
Confidence 3566 777777 7777777777664
No 236
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=91.29 E-value=0.13 Score=35.74 Aligned_cols=25 Identities=12% Similarity=0.214 Sum_probs=19.2
Q ss_pred CCCCcccccccCCCcccCchHHHHHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
+..|| .|.+|| ..|.+...|..|.+
T Consensus 14 ~~~~~-~C~~C~-~~f~~~~~l~~H~~ 38 (106)
T 2ee8_A 14 TKKEF-ICKFCG-RHFTKSYNLLIHER 38 (106)
T ss_dssp CCCCC-BCSSSC-CBCSSHHHHHHHHH
T ss_pred CCcCe-ECCCCC-CccCCHHHHHHHHH
Confidence 45577 888888 88888888888865
No 237
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=91.10 E-value=0.63 Score=38.79 Aligned_cols=69 Identities=6% Similarity=-0.102 Sum_probs=49.6
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++.+.|+.+.......+. .-...+.+.+..+++|.|++++.+.+- .++..+.+.|+.+|++++.
T Consensus 82 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~ 150 (339)
T 3h5o_A 82 TGIETVLDAAGYQMLIGNSHYDA---GQELQLLRAYLQHRPDGVLITGLSHAE-PFERILSQHALPVVYMMDL 150 (339)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHTTCCSEEEEECSCCCT-THHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCh---HHHHHHHHHHHcCCCCEEEEeCCCCCH-HHHHHHhcCCCCEEEEeec
Confidence 37888999999998855433222 223344445557899999999855443 6788889999999999875
No 238
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=90.86 E-value=0.085 Score=34.83 Aligned_cols=24 Identities=25% Similarity=0.169 Sum_probs=15.9
Q ss_pred CCCcccccc--cCCCcccCchHHHHHHH
Q 046085 29 AEPYVLVIV--EGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 29 ~epy~~C~V--CGdrkf~t~~kL~kHFk 54 (230)
..|| .|.+ || ..|.+...|..|.+
T Consensus 29 ~~~~-~C~~~~C~-~~f~~~~~l~~H~~ 54 (85)
T 2j7j_A 29 QLPY-ECPHEGCD-KRFSLPSRLKRHEK 54 (85)
T ss_dssp TCCE-ECCSTTCC-CEESSHHHHHHHHH
T ss_pred CCCe-eCCCCCCc-CccCCHHHHHHHHH
Confidence 4566 6766 77 66777777776653
No 239
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=90.86 E-value=0.28 Score=34.59 Aligned_cols=23 Identities=13% Similarity=0.059 Sum_probs=11.2
Q ss_pred CCCcccccccCCCcccCchHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHF 53 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHF 53 (230)
..|| .|.+|| ..|.+...|..|.
T Consensus 64 ~~~~-~C~~C~-~~f~~~~~l~~H~ 86 (124)
T 2dlq_A 64 EQVF-TCSVCQ-ETFRRRMELRLHM 86 (124)
T ss_dssp CCCE-ECSSSC-CEESSHHHHHHHH
T ss_pred CCCe-ECCCCC-CccCCHHHHHHHH
Confidence 3444 455555 4555555555444
No 240
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=90.81 E-value=0.13 Score=34.48 Aligned_cols=31 Identities=26% Similarity=0.419 Sum_probs=21.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.+...|.+|.+ +|..|
T Consensus 58 ~~~~~~-~C~~C~-~~f~~~~~l~~H~~-~H~~~ 88 (90)
T 1a1h_A 58 TGEKPF-ACDICG-RKFARSDERKRHTK-IHLRQ 88 (90)
T ss_dssp HCCCCE-ECTTTC-CEESSHHHHHHHHG-GGGC-
T ss_pred CCCCCc-cCCCCC-chhCCHHHHHHHHH-Hhccc
Confidence 356677 788888 77888888888864 45544
No 241
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=90.62 E-value=0.11 Score=35.54 Aligned_cols=26 Identities=27% Similarity=0.324 Sum_probs=23.3
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
....|| .|.+|| ..|.+...|..|.+
T Consensus 4 ~~~~~~-~C~~C~-~~f~~~~~l~~H~~ 29 (96)
T 2dmd_A 4 GSSGPH-KCEVCG-KCFSRKDKLKTHMR 29 (96)
T ss_dssp CCCCCC-CBTTTT-BCCCCHHHHHHHGG
T ss_pred CCCcCe-ECCCCC-CccCCHHHHHHHHH
Confidence 456799 999999 99999999999976
No 242
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=90.61 E-value=0.094 Score=33.86 Aligned_cols=30 Identities=20% Similarity=0.332 Sum_probs=26.1
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
.|+. +||.|. ..|.+-..|..||...|..+
T Consensus 3 ~EGF-iCP~C~-~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 3 SEGF-ICPQCM-KSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp SEEE-ECTTTC-CEESSHHHHHHHHHHHTSSS
T ss_pred Cccc-CCcHHH-HHcCCHHHHHHHHHhccccC
Confidence 3566 999999 99999999999999999643
No 243
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=90.60 E-value=0.6 Score=37.20 Aligned_cols=68 Identities=4% Similarity=-0.112 Sum_probs=48.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHH-HHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQ-EATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr-~ARer~l~TVVVGd~~ 177 (230)
.|+..+++..|+.+.......+. .....+.+.+..+++|.|++.+.+ .+.++ .+.+.|+.+|+||...
T Consensus 28 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~~dgiIi~~~~---~~~~~~~l~~~~iPvV~~~~~~ 96 (277)
T 3e61_A 28 RGVEDVALAHGYQVLIGNSDNDI---KKAQGYLATFVSHNCTGMISTAFN---ENIIENTLTDHHIPFVFIDRIN 96 (277)
T ss_dssp HHHHHHHHHTTCCEEEEECTTCH---HHHHHHHHHHHHTTCSEEEECGGG---HHHHHHHHHHC-CCEEEGGGCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCH---HHHHHHHHHHHhCCCCEEEEecCC---hHHHHHHHHcCCCCEEEEeccC
Confidence 46778888999988865444333 333445555557899999999843 45678 8899999999998863
No 244
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=90.59 E-value=0.66 Score=37.33 Aligned_cols=70 Identities=11% Similarity=0.085 Sum_probs=47.3
Q ss_pred CchhhhhhhhcEEEEEcc-ccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMS-DKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~-dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+..+. ...+. .-...+.+.+-.++++.|++.+.+++ +..+++.+.+.|+.+|.++..
T Consensus 24 ~g~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~ipvV~~~~~ 95 (303)
T 3d02_A 24 EGVVQAGKEFNLNASQVGPSSTDA---PQQVKIIEDLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESP 95 (303)
T ss_dssp HHHHHHHHHTTEEEEEECCSSSCH---HHHHHHHHHHHHTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEEESCT
T ss_pred HHHHHHHHHcCCEEEEECCCCCCH---HHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 466777888899887443 22222 22223333333689999999887654 457889999999999999864
No 245
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.45 E-value=0.15 Score=33.28 Aligned_cols=28 Identities=21% Similarity=0.218 Sum_probs=24.4
Q ss_pred CCCCCccccc-ccCCCcccCchHHHHHHHHHh
Q 046085 27 RPAEPYVLVI-VEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 27 ~p~epy~~C~-VCGdrkf~t~~kL~kHFkqlH 57 (230)
.+..|| .|. .|| ..|.....|.+|.+ +|
T Consensus 32 ~~~~p~-~C~~~C~-k~f~~~~~L~~H~~-~h 60 (66)
T 2eod_A 32 CPRLPV-ACPNQCG-VGTVAREDLPGHLK-DS 60 (66)
T ss_dssp CSSSEE-ECTTCCS-CCEEETTTHHHHHH-TT
T ss_pred cCCcCc-cCCcccC-cccccHHHHHHHHH-hh
Confidence 677899 999 999 99999999999964 45
No 246
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=90.24 E-value=0.69 Score=37.34 Aligned_cols=68 Identities=4% Similarity=0.005 Sum_probs=45.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+ ..-...+.+.+..+++|.|++++.+.+ ...+..+. .|+.+|+++..
T Consensus 28 ~gi~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~-~~iPvV~~~~~ 95 (285)
T 3c3k_A 28 KGIEKTAEKNGYRILLCNTESD---LARSRSCLTLLSGKMVDGVITMDALSE-LPELQNII-GAFPWVQCAEY 95 (285)
T ss_dssp HHHHHHHHHTTCEEEEEECTTC---HHHHHHHTHHHHTTCCSEEEECCCGGG-HHHHHHHH-TTSSEEEESSC
T ss_pred HHHHHHHHHcCCEEEEEeCCCC---HHHHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHh-cCCCEEEEccc
Confidence 4667778888988875543222 222333444454689999999875543 35677777 99999999865
No 247
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=90.23 E-value=0.88 Score=37.80 Aligned_cols=69 Identities=4% Similarity=-0.006 Sum_probs=47.4
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. .....+.+.|..+++|.|++++.+.+ ...+..+.+.|+.+|+++..
T Consensus 83 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 151 (332)
T 2o20_A 83 RGVDDIASMYKYNMILANSDNDV---EKEEKVLETFLSKQVDGIVYMGSSLD-EKIRTSLKNSRTPVVLVGTI 151 (332)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEECSSCCC-HHHHHHHHHHCCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEECCCCh---HHHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 47778888999988755433222 22233344444689999999885443 35677788899999999875
No 248
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=90.20 E-value=0.94 Score=37.51 Aligned_cols=70 Identities=9% Similarity=-0.000 Sum_probs=46.5
Q ss_pred Cchhhhhhhh-cEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRV-WFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRA-Gv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++... |+.+.......+. .....+.+.+-.+++|.|++.+.+.+ +...++.+.+.|+.+|+++..
T Consensus 25 ~gi~~~a~~~~g~~l~i~~~~~~~---~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 96 (325)
T 2x7x_A 25 DEILREAMFYNGVSVEIRSAGDDN---SKQAEDVHYFMDEGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRK 96 (325)
T ss_dssp HHHHHHHTTSSSCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCcEEEEeCCCCCH---HHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 3566667777 8877654322221 22233333333689999999876654 467888899999999999875
No 249
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=90.20 E-value=0.24 Score=39.83 Aligned_cols=71 Identities=7% Similarity=0.022 Sum_probs=48.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc-hHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD-FVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD-F~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+....... ..|..-.....+.|-.+++|.|++.+-+++ +...++.+. .|+.+|+++..
T Consensus 25 ~g~~~~a~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~-~~iPvV~~~~~ 96 (304)
T 3o1i_D 25 YGMVSEAEKQGVNLRVLEAGG-YPNKSRQEQQLALCTQWGANAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQ 96 (304)
T ss_dssp HHHHHHHHHHTCEEEEEECSS-TTCHHHHHHHHHHHHHHTCSEEEECCSSTTSSTTTHHHHT-TTSCEEECSSC
T ss_pred HHHHHHHHHcCCeEEEEcCCC-CCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHc-CCCCEEEecCC
Confidence 467778888899888654432 112233334444444689999999876654 456788888 99999999765
No 250
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=90.17 E-value=0.37 Score=39.00 Aligned_cols=69 Identities=13% Similarity=0.012 Sum_probs=46.3
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. .-...+.+.+..+++|.|++.+.+.+ ...++.+.+.|+.+|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 96 (287)
T 3bbl_A 28 SSMVREAGAVNYFVLPFPFSEDR---SQIDIYRDLIRSGNVDGFVLSSINYN-DPRVQFLLKQKFPFVAFGRS 96 (287)
T ss_dssp HHHHHHHHHTTCEEEECCCCSST---TCCHHHHHHHHTTCCSEEEECSCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCCch---HHHHHHHHHHHcCCCCEEEEeecCCC-cHHHHHHHhcCCCEEEECCc
Confidence 46777888889888755422111 11122333444689999999876543 26788888899999999865
No 251
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=90.15 E-value=0.15 Score=36.79 Aligned_cols=27 Identities=7% Similarity=-0.168 Sum_probs=23.5
Q ss_pred CCCCcccccccCCCcc-cCchHHHHHHHHHh
Q 046085 28 PAEPYVLVIVEGDLRL-YNNDKLVNHFKQIH 57 (230)
Q Consensus 28 p~epy~~C~VCGdrkf-~t~~kL~kHFkqlH 57 (230)
...|| .|.+|| ..| .+...|..|.+ +|
T Consensus 31 ~~~~~-~C~~C~-k~F~~~~~~L~~H~~-~h 58 (96)
T 2ctd_A 31 DKGSV-SCPTCQ-AVGRKTIEGLKKHME-NC 58 (96)
T ss_dssp HTSCE-ECTTTC-SCEESSHHHHHHHHH-HH
T ss_pred CCCCc-CCCCCC-CCcccCHHHHHHHHH-HH
Confidence 45799 999999 999 89999999965 46
No 252
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=90.14 E-value=0.5 Score=39.11 Aligned_cols=71 Identities=11% Similarity=0.053 Sum_probs=45.4
Q ss_pred chhhhhhhhcEEEEEc--cccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVRTM--SDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV--~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
|+..++++.|+.+... ...++ .|..-.....+.|..+++|.|++.++.......++.+.+.|..+|++.|.
T Consensus 65 gi~~~a~~~g~~~~~~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~ip~V~~~~~ 137 (342)
T 1jx6_A 65 SFEKRLYKLNINYQLNQVFTRPN-ADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI 137 (342)
T ss_dssp HHHHHHHHTTCCEEEEEEECCTT-CCHHHHHHHHHHHHHTTCSEEEECCSSSTTHHHHHHHHHHCSCEEEEETC
T ss_pred HHHHHHHHcCCeEEEEecCCCCc-cCHHHHHHHHHHHHhcCCCEEEEeCChHhHHHHHHHHHHcCCCEEEEecC
Confidence 7788889999766643 11110 11122223333344689999999444444578899999999999988543
No 253
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=90.06 E-value=0.41 Score=38.74 Aligned_cols=70 Identities=6% Similarity=-0.087 Sum_probs=47.4
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+.......+. .-...+.+.+..+++|.|++++.+++-..++..+.+.|+.+|+++..
T Consensus 40 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 109 (293)
T 2iks_A 40 NYLERQARQRGYQLLIACSEDQP---DNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRA 109 (293)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEECCSSCTTCHHHHTTTTSSSCEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEcCCCCH---HHHHHHHHHHHHcCCCEEEEeCCCCCcHHHHHHHHhCCCCEEEECCc
Confidence 46777888889888754432222 22233344444689999999876543245778888899999999865
No 254
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=90.01 E-value=0.12 Score=37.41 Aligned_cols=26 Identities=15% Similarity=0.169 Sum_probs=22.0
Q ss_pred CCcccccccCCCcccCchHHHHHHHHHh
Q 046085 30 EPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 30 epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
.|| .|.+|| ..|.+...|.+|.+.-|
T Consensus 99 ~~~-~C~~C~-k~f~~~~~l~~H~~~h~ 124 (129)
T 2wbt_A 99 HTK-VCPVCK-KEFTSTDSALDHVCKKH 124 (129)
T ss_dssp CCC-BCTTTC-CBCSSHHHHHHHHHHTT
T ss_pred CCC-CCCCCC-cccCCHHHHHHHHHHHC
Confidence 046 899999 99999999999987655
No 255
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=89.85 E-value=0.097 Score=40.34 Aligned_cols=28 Identities=25% Similarity=0.373 Sum_probs=22.2
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
...|| .|.+|| ..|.+...|..|.+. |.
T Consensus 130 ~~~~~-~C~~C~-~~f~~~~~L~~H~~~-H~ 157 (190)
T 2i13_A 130 GEKPY-KCPECG-KSFSREDNLHTHQRT-HT 157 (190)
T ss_dssp CCCCE-ECTTTC-CEESCHHHHHHHHHH-HH
T ss_pred CCCCe-ECCCCC-cccCCHHHHHHHHHh-cC
Confidence 45688 888898 888888888888764 54
No 256
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=89.67 E-value=0.86 Score=38.46 Aligned_cols=69 Identities=4% Similarity=0.021 Sum_probs=47.2
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++...|+.+.......+. .-...+.+.|..+++|.|++.+.+.+ ...+..+.+.|+.+|+|+..
T Consensus 86 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~ 154 (348)
T 3bil_A 86 TEIQSTASKAGLATIITNSNEDA---TTMSGSLEFLTSHGVDGIICVPNEEC-ANQLEDLQKQGMPVVLVDRE 154 (348)
T ss_dssp HHHHHHHHHTTCCEEEEECTTCH---HHHHHHHHHHHHTTCSCEEECCCGGG-HHHHHHHHHC-CCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEEeCCCCH---HHHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHHhCCCCEEEEccc
Confidence 46777888899888754432222 22333444454689999999876554 46788888899999999875
No 257
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=89.58 E-value=0.77 Score=36.65 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=48.4
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+..+.... ..|..-...+.+.+-..++|.|++.+.++ ++..+++.+.+.|+.+|+++..
T Consensus 27 ~gi~~~a~~~g~~~~~~~~~~-~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 99 (289)
T 3brs_A 27 EGAQMAAKEYEIKLEFMAPEK-EEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSG 99 (289)
T ss_dssp HHHHHHHHHHTCEEEECCCSS-TTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTHHHHTTTGGGTCEEEEESSC
T ss_pred HHHHHHHHHcCCEEEEecCCC-CCCHHHHHHHHHHHHHhCCCEEEEeCCChHHhHHHHHHHHHCCCcEEEECCC
Confidence 377788888999888654210 11112222333334468999999987554 4567888899999999999875
No 258
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=89.50 E-value=0.15 Score=37.66 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=24.6
Q ss_pred CCCCcccccc--cCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVIV--EGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~V--CGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...|| .|.+ || ..|.+...|.+|.+.+|..+
T Consensus 94 ~~~~~-~C~~~~C~-~~f~~~~~L~~H~~~~H~~~ 126 (155)
T 2gli_A 94 GEKPY-MCEHEGCS-KAFSNASDRAKHQNRTHSNE 126 (155)
T ss_dssp TCCCE-ECCSTTCC-CEESSSSTTHHHHHHTTCSC
T ss_pred CCCCe-eCCCCCCC-CccCCHHHHHHHHHHhcCCC
Confidence 45678 8887 88 88888888888888888754
No 259
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=89.49 E-value=0.38 Score=39.15 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=48.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++.+.|+.+........ .-...+.+.+..+++|.|++++.+.+- ..+..+.+.|+.+|+||..
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~----~~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~ 97 (294)
T 3qk7_A 30 SWIGIELGKRGLDLLLIPDEPG----EKYQSLIHLVETRRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRS 97 (294)
T ss_dssp HHHHHHHHHTTCEEEEEEECTT----CCCHHHHHHHHHTCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCh----hhHHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHhCCCCEEEECCC
Confidence 4677888888988875543221 112334455556899999999876543 7888999999999999975
No 260
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=89.44 E-value=0.8 Score=36.78 Aligned_cols=65 Identities=22% Similarity=0.231 Sum_probs=53.0
Q ss_pred hhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHH-HHHHHHHcCCeEEEecCC
Q 046085 107 VVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVE-VLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 107 a~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~-lLr~ARer~l~TVVVGd~ 176 (230)
-+.++..||.|+||.. ||. |+..+.+...+.+..-+|.|-||.+++. .+|+.+.-|..+.+|=..
T Consensus 19 kdiikkngfkvrtvrs-pqe----lkdsieelvkkynativvvvvddkewaekairfvkslgaqvliiiyd 84 (134)
T 2l69_A 19 KDIIKKNGFKVRTVRS-PQE----LKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYD 84 (134)
T ss_dssp HHHHHHTTCEEEEECS-HHH----HHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred HHHHHhcCceEEEecC-HHH----HHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 4668899999999975 664 7888888888888888999999999975 688889999988766443
No 261
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=89.41 E-value=1.4 Score=36.33 Aligned_cols=69 Identities=19% Similarity=0.163 Sum_probs=47.8
Q ss_pred hhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCC-cc-hHHHHHHHHHcCCeEEEecCCCCch
Q 046085 108 VKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDD-SD-FVEVLQEATLRCLKTGVAGYMNDGT 180 (230)
Q Consensus 108 ~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDD-SD-F~~lLr~ARer~l~TVVVGd~~~~a 180 (230)
.|....||-|+||.||..-- --++.+++-. -..+.+|+|+-| .. ..+++..|+++|+.+.||=+..+..
T Consensus 46 eefekqgvdvrtvedkedfr--enireiwery--pqldvvvivttddkewikdfieeakergvevfvvynnkddd 116 (162)
T 2l82_A 46 EEFEKQGVDVRTVEDKEDFR--ENIREIWERY--PQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNNKDDD 116 (162)
T ss_dssp HHHHTTTCEEEECCSHHHHH--HHHHHHHHHC--TTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEECSCHH
T ss_pred HHHHHcCCceeeeccHHHHH--HHHHHHHHhC--CCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEEEecCCCch
Confidence 35667899999999997631 1233444433 246888887654 44 4578999999999999998764333
No 262
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=89.34 E-value=0.2 Score=35.20 Aligned_cols=24 Identities=17% Similarity=0.317 Sum_probs=16.5
Q ss_pred CCCcccccccCCCcccCchHHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
..|| .|.+|| ..|.+...|..|.+
T Consensus 64 ~~~~-~C~~C~-~~f~~~~~l~~H~~ 87 (119)
T 2jp9_A 64 VKPF-QCKTCQ-RKFSRSDHLKTHTR 87 (119)
T ss_dssp CCCE-ECTTTC-CEESCHHHHHHHHH
T ss_pred CCCc-cCCccC-chhCCHHHHHHHHH
Confidence 4567 777777 77777777777764
No 263
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=89.33 E-value=0.38 Score=38.87 Aligned_cols=69 Identities=7% Similarity=-0.110 Sum_probs=40.6
Q ss_pred CchhhhhhhhcEEEEEc-cccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTM-SDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV-~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+... ....+. .-...+.+.+..+++|.|++.+.+.+ ...++.+.+.|+.+|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 97 (290)
T 3clk_A 28 DGIQEEAHKNGYNLIIVYSGSADP---EEQKHALLTAIERPVMGILLLSIALT-DDNLQLLQSSDVPYCFLSMG 97 (290)
T ss_dssp HHHHHHHHTTTCEEEEEC-------------CHHHHHHSSCCSEEEEESCC-----CHHHHHCC--CEEEESCC
T ss_pred HHHHHHHHHcCCeEEEEeCCCCCH---HHHHHHHHHHHhcCCCEEEEecccCC-HHHHHHHHhCCCCEEEEcCC
Confidence 46777888889888765 332221 22233344444689999999876543 35677788899999999875
No 264
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=89.32 E-value=0.11 Score=38.31 Aligned_cols=30 Identities=17% Similarity=0.195 Sum_probs=23.7
Q ss_pred CCCCcccccc--cCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVIV--EGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~V--CGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...|| .|.+ || ..|.+...|..|.+. |.-+
T Consensus 64 ~~~~~-~C~~~~C~-~~f~~~~~l~~H~~~-h~~~ 95 (155)
T 2gli_A 64 GEKPH-KCTFEGCR-KSYSRLENLKTHLRS-HTGE 95 (155)
T ss_dssp CCCCC-CCCSTTCC-CCCSSHHHHHHHHHH-TTTC
T ss_pred CCCCc-cCCCCCCC-CcccCHHHHHHHHHH-cCCC
Confidence 45688 8986 99 999999999999875 6544
No 265
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=89.11 E-value=0.83 Score=37.83 Aligned_cols=69 Identities=9% Similarity=0.024 Sum_probs=49.2
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++...|+.+....... |......+.+.+..+++|.|++.+.+.+ ...+..+.+.|+.+|+++..
T Consensus 80 ~gi~~~a~~~g~~~~~~~~~~---~~~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 148 (332)
T 2hsg_A 80 RGIEDIATMYKYNIILSNSDQ---NQDKELHLLNNMLGKQVDGIIFMSGNVT-EEHVEELKKSPVPVVLAASI 148 (332)
T ss_dssp HHHHHHHHHHTCEEEEEECCS---HHHHHHHHHHHTSCCSSCCEEECCSSCC-HHHHHHHTTSSSCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCC---ChHHHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 467788889999887554322 2233344555555789999999876544 36788888899999999875
No 266
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=89.09 E-value=0.75 Score=37.32 Aligned_cols=67 Identities=12% Similarity=0.021 Sum_probs=46.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+.......... .....+.|..+++|.|++.+.+.+- ..++.+.+ |+.+|+||..
T Consensus 31 ~gi~~~a~~~g~~~~~~~~~~~~~----~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~-~iPvV~i~~~ 97 (289)
T 3k9c_A 31 EQIYAAATRRGYDVMLSAVAPSRA----EKVAVQALMRERCEAAILLGTRFDT-DELGALAD-RVPALVVARA 97 (289)
T ss_dssp HHHHHHHHHTTCEEEEEEEBTTBC----HHHHHHHHTTTTEEEEEEETCCCCH-HHHHHHHT-TSCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHH----HHHHHHHHHhCCCCEEEEECCCCCH-HHHHHHHc-CCCEEEEcCC
Confidence 467788889998887554333221 2223333446899999999876654 67777776 9999999976
No 267
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.89 E-value=0.18 Score=30.40 Aligned_cols=29 Identities=24% Similarity=0.402 Sum_probs=24.1
Q ss_pred CCCCCccccc--ccCCCcccCchHHHHHHHHHhH
Q 046085 27 RPAEPYVLVI--VEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 27 ~p~epy~~C~--VCGdrkf~t~~kL~kHFkqlHe 58 (230)
....|| .|. .|| ..|.....|..|.+ +|.
T Consensus 8 ~~~k~~-~C~~~~C~-k~f~~~~~L~~H~~-~H~ 38 (48)
T 2ent_A 8 TGEKPF-ACTWPGCG-WRFSRSDELSRHRR-SHS 38 (48)
T ss_dssp CCCCCE-ECCSSSCC-CEESSHHHHHHHHT-TSC
T ss_pred CCCCCe-ECCCCCCC-CccCCHHHHHHHHH-HhC
Confidence 456799 998 899 99999999999964 464
No 268
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=88.85 E-value=0.14 Score=35.95 Aligned_cols=27 Identities=37% Similarity=0.492 Sum_probs=21.2
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHh
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
...|| .|.+|| ..|.+...|..|.+ +|
T Consensus 34 ~~~~~-~C~~C~-~~f~~~~~l~~H~~-~h 60 (110)
T 2csh_A 34 GLRPY-GCGVCG-KKFKMKHHLVGHMK-IH 60 (110)
T ss_dssp CCCSE-ECTTTS-CEESSSHHHHHHHT-TT
T ss_pred CCcCc-cCCCCC-cccCCHHHHHHHHH-Hc
Confidence 45678 888888 88888888888864 44
No 269
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=88.67 E-value=0.23 Score=36.86 Aligned_cols=31 Identities=13% Similarity=-0.036 Sum_probs=25.9
Q ss_pred CCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 28 PAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 28 p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...+| .|..|| ..|.+...|..|.+..|..+
T Consensus 22 ~~~~~-~C~~C~-~~f~~~~~L~~H~~~~H~~~ 52 (155)
T 2rpc_A 22 AQLSR-PKKSCD-RTFSTMHELVTHVTMEHVGG 52 (155)
T ss_dssp TCCSS-SCCCCC-CCBSSHHHHHHHHHTTTSCC
T ss_pred hhccc-ccccCC-cccCCHHHHHHHHHhhcCCC
Confidence 34567 899999 99999999999998888654
No 270
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=88.57 E-value=1.8 Score=34.49 Aligned_cols=69 Identities=10% Similarity=0.006 Sum_probs=44.2
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHH-cCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATL-RCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARe-r~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. .-...+.+.+-..++|.|++.+.+.+ ..++..+.+ .|+.+|+++..
T Consensus 27 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 96 (289)
T 1dbq_A 27 EAVEKNCFQKGYTLILGNAWNNL---EKQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWG 96 (289)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEEECSCCC-HHHHHHHHHTTTSCEEEEECS
T ss_pred HHHHHHHHHcCCeEEEEcCCCCh---HHHHHHHHHHHhCCCCEEEEEeccCC-HHHHHHHHhccCCCEEEEccC
Confidence 36677778888888754433222 33333444444689999999876643 234455545 79999999875
No 271
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=88.21 E-value=0.18 Score=35.90 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=11.9
Q ss_pred CCCcccccc--cCCCcccCchHHHHHH
Q 046085 29 AEPYVLVIV--EGDLRLYNNDKLVNHF 53 (230)
Q Consensus 29 ~epy~~C~V--CGdrkf~t~~kL~kHF 53 (230)
..|| .|.+ || ..|.+...|..|.
T Consensus 60 ~~~~-~C~~~~C~-~~f~~~~~l~~H~ 84 (124)
T 1ubd_C 60 EKPF-QCTFEGCG-KRFSLDFNLRTHV 84 (124)
T ss_dssp CCCE-ECCSTTCC-CEESCHHHHHHHH
T ss_pred CCCe-eCCCCCCc-CccCCHHHHHHHH
Confidence 3445 5544 55 5555555555554
No 272
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=88.19 E-value=0.22 Score=32.63 Aligned_cols=26 Identities=19% Similarity=0.258 Sum_probs=21.7
Q ss_pred CCCCCcccccc--cCCCcccCchHHHHHHH
Q 046085 27 RPAEPYVLVIV--EGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 27 ~p~epy~~C~V--CGdrkf~t~~kL~kHFk 54 (230)
....|| .|.+ || ..|.+...|.+|.+
T Consensus 43 ~~~~~~-~C~~~~C~-k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 43 TGEKPF-SCSWKGCE-RRFARSDELSRHRR 70 (72)
T ss_dssp SSSCSE-ECCCTTCC-CEESSHHHHHHHTT
T ss_pred CCCCCc-cCCCCCCC-cccCCHHHHHhHhh
Confidence 346789 9976 99 99999999999953
No 273
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=87.79 E-value=0.5 Score=36.60 Aligned_cols=44 Identities=16% Similarity=0.173 Sum_probs=36.6
Q ss_pred CcceEEEEcC---CcchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 143 RFGCLVFVSD---DSDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 143 ~vdclvLVSD---DSDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
.=|+++++|- ..+-..+++.|+++|++||.|-+.....|.+.||
T Consensus 110 ~~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad 156 (188)
T 1tk9_A 110 EKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCD 156 (188)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCC
Confidence 4488888886 4567788899999999999998875678999999
No 274
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=87.79 E-value=0.31 Score=32.05 Aligned_cols=26 Identities=15% Similarity=0.107 Sum_probs=19.6
Q ss_pred Ccccc--cccCCCcccCchHHHHHHHHHhH
Q 046085 31 PYVLV--IVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 31 py~~C--~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
|| .| ..|| ..|.+...|..|.+.-+.
T Consensus 1 p~-~C~~~~C~-~~f~~~~~l~~H~~~h~~ 28 (85)
T 2j7j_A 1 MY-VCHFENCG-KAFKKHNQLKVHQFSHTQ 28 (85)
T ss_dssp CE-ECCSTTCC-CEESSHHHHHHHHHHHHT
T ss_pred Cc-cCCCCCCC-cccCCHHHHHHHHHHhCC
Confidence 67 78 7788 888888888888765554
No 275
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=87.49 E-value=0.19 Score=32.94 Aligned_cols=29 Identities=14% Similarity=0.210 Sum_probs=24.1
Q ss_pred CCCCcccccc--cCCCcccCchHHHHHHHHHhHH
Q 046085 28 PAEPYVLVIV--EGDLRLYNNDKLVNHFKQIHKR 59 (230)
Q Consensus 28 p~epy~~C~V--CGdrkf~t~~kL~kHFkqlHeR 59 (230)
...|| .|.. || ..|.+...|..|.+ +|..
T Consensus 14 ~~~~~-~C~~~~C~-k~f~~~~~L~~H~~-~H~~ 44 (72)
T 2epa_A 14 RIRSH-ICSHPGCG-KTYFKSSHLKAHTR-THTG 44 (72)
T ss_dssp CCCCE-ECSSTTTC-CEESSHHHHHHHHH-HHSS
T ss_pred ccCce-eCCCCCCc-cccCCHHHHHHHHH-hcCC
Confidence 45688 9998 99 99999999999985 5643
No 276
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=87.47 E-value=0.88 Score=35.45 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=36.6
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 143 RFGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 143 ~vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
.=|+++++|-. .+...+++.|+++|++||.|-+.....|.+.||
T Consensus 116 ~~d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad 162 (198)
T 2xbl_A 116 EGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCD 162 (198)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCC
Confidence 45788888754 456778899999999999999876678999999
No 277
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.96 E-value=0.46 Score=32.32 Aligned_cols=28 Identities=14% Similarity=-0.008 Sum_probs=24.0
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
.| .|..|| ..|.+...|..|.+..|.-+
T Consensus 25 ~~-~C~~C~-k~f~~~~~L~~H~~~~H~~~ 52 (95)
T 2ej4_A 25 SR-PKKSCD-RTFSTMHELVTHVTMEHVGG 52 (95)
T ss_dssp SS-SCCCCC-CCCSSHHHHHHHHHHTTTCC
T ss_pred CC-cccccc-cccCCHHHHHHHHHHhccCC
Confidence 35 799999 99999999999988778654
No 278
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=86.86 E-value=0.37 Score=33.82 Aligned_cols=24 Identities=17% Similarity=0.332 Sum_probs=14.7
Q ss_pred CCCcccccc--cCCCcccCchHHHHHHH
Q 046085 29 AEPYVLVIV--EGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 29 ~epy~~C~V--CGdrkf~t~~kL~kHFk 54 (230)
..|| .|.+ || ..|.+...|..|.+
T Consensus 4 ~~~~-~C~~~~C~-~~f~~~~~l~~H~~ 29 (119)
T 2jp9_A 4 KRPF-MCAYPGCN-KRYFKLSHLQMHSR 29 (119)
T ss_dssp SCCB-CCCSTTSC-CCBSCHHHHHHHHH
T ss_pred Ceee-eCCCCCCc-chhCCHHHHHHHHH
Confidence 3456 6665 66 66666666666654
No 279
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=86.75 E-value=3.2 Score=31.10 Aligned_cols=94 Identities=10% Similarity=0.001 Sum_probs=58.2
Q ss_pred chhhhhhhhcEEEEEccccch-------HHH-HHHHHHHHHHHhhcC--cceEEEE----cCCcc-----hHHHHHHHHH
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQ-------AAD-VLLRNYMVDMMDKRR--FGCLVFV----SDDSD-----FVEVLQEATL 165 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpq-------AAD-~AL~~~m~~~m~~r~--vdclvLV----SDDSD-----F~~lLr~ARe 165 (230)
.+-.+|++.|+.+-.+|..|. ..+ .++...+...+...| ++.++.. |++.. -..+...+++
T Consensus 34 ~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 113 (179)
T 3l8h_A 34 QAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARR 113 (179)
T ss_dssp HHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 455789999999999999885 111 123345556666667 7776543 34432 2233344444
Q ss_pred cCC---eEEEecCC-CCchhhhhhh----ccccccchHHHH
Q 046085 166 RCL---KTGVAGYM-NDGTLKRIAD----RLKWAYNSEVEK 198 (230)
Q Consensus 166 r~l---~TVVVGd~-~~~aL~r~AD----~leW~~~~e~e~ 198 (230)
-|+ .+++|||+ +|-.-.+.|- ++.|.+.++.+.
T Consensus 114 ~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~ 154 (179)
T 3l8h_A 114 YDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLA 154 (179)
T ss_dssp HTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHH
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhh
Confidence 555 59999998 5444555555 778887766544
No 280
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=86.41 E-value=0.13 Score=38.29 Aligned_cols=22 Identities=18% Similarity=0.227 Sum_probs=10.6
Q ss_pred CCcccccc--cCCCcccCchHHHHHH
Q 046085 30 EPYVLVIV--EGDLRLYNNDKLVNHF 53 (230)
Q Consensus 30 epy~~C~V--CGdrkf~t~~kL~kHF 53 (230)
.|| .|.+ || ..|.+...|..|.
T Consensus 89 ~~~-~C~~~~C~-~~f~~~~~L~~H~ 112 (155)
T 2rpc_A 89 KPF-PCPFPGCG-KIFARSENLKIHK 112 (155)
T ss_dssp CSE-ECSCTTTC-CEESCHHHHHHHH
T ss_pred Ccc-cCCcCCCC-CccCCHHHHHHHH
Confidence 344 4444 54 4444444454444
No 281
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=85.96 E-value=1.6 Score=33.77 Aligned_cols=68 Identities=9% Similarity=0.074 Sum_probs=49.0
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc---chHHHHHHHHHcCCeEEEecCCCCchhh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS---DFVEVLQEATLRCLKTGVAGYMNDGTLK 182 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS---DF~~lLr~ARer~l~TVVVGd~~~~aL~ 182 (230)
++..|.+.|+.|..+++- . + ..+ ..=|+++++|-.- +...+++.|+++|+++|.|-+.....|.
T Consensus 55 ~~~~l~~~g~~~~~~~~~-~---------~-~~~--~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~ 121 (186)
T 1m3s_A 55 FAMRLMHMGFNAHIVGEI-L---------T-PPL--AEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIG 121 (186)
T ss_dssp HHHHHHHTTCCEEETTST-T---------C-CCC--CTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHH
T ss_pred HHHHHHhcCCeEEEeCcc-c---------c-cCC--CCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEEEEECCCCCchH
Confidence 445678899999887653 1 1 112 2336777777543 4566788999999999999997667899
Q ss_pred hhhh
Q 046085 183 RIAD 186 (230)
Q Consensus 183 r~AD 186 (230)
+.||
T Consensus 122 ~~ad 125 (186)
T 1m3s_A 122 KQAD 125 (186)
T ss_dssp HHCS
T ss_pred HhCC
Confidence 9999
No 282
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=85.94 E-value=0.11 Score=34.07 Aligned_cols=28 Identities=4% Similarity=-0.091 Sum_probs=19.6
Q ss_pred CCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 27 RPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
....|| .|.+|| ..|.....|. .+|.-|
T Consensus 10 ~~~k~~-~C~~C~-k~F~~~~~l~----~~H~~~ 37 (62)
T 1vd4_A 10 TNRASF-KCPVCS-STFTDLEANQ----LFDPMT 37 (62)
T ss_dssp CSSSEE-ECSSSC-CEEEHHHHHH----HEETTT
T ss_pred CCCCCc-cCCCCC-chhccHHHhH----hhcCCC
Confidence 346789 999999 8887766664 556433
No 283
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=85.86 E-value=0.27 Score=39.91 Aligned_cols=68 Identities=9% Similarity=-0.078 Sum_probs=49.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+......... .....+.+.|..+++|.|++++.+.+- .+..+.+.|+.+|+||..
T Consensus 34 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdGiIi~~~~~~~--~~~~~~~~~iPvV~~~~~ 101 (301)
T 3miz_A 34 RGIQDWANANGKTILIANTGGSS---EREVEIWKMFQSHRIDGVLYVTMYRRI--VDPESGDVSIPTVMINCR 101 (301)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEEEEEEEEE--CCCCCTTCCCCEEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEeCCCCh---HHHHHHHHHHHhCCCCEEEEecCCccH--HHHHHHhCCCCEEEECCC
Confidence 35788899999999865433222 233445555557899999998865443 677788899999999865
No 284
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=85.49 E-value=0.42 Score=36.71 Aligned_cols=28 Identities=18% Similarity=0.175 Sum_probs=18.2
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
..|| .|.+|| ..|.+...|..|.+.-|.
T Consensus 103 ~~~~-~C~~C~-~~f~~~~~l~~H~~~h~~ 130 (190)
T 2i13_A 103 EKPY-ACPECG-KSFSQLAHLRAHQRTHTG 130 (190)
T ss_dssp CCCE-ECTTTC-CEESSHHHHHHHHHHHHC
T ss_pred CCCC-cCCCCC-CccCCHHHHHHHHHHhCC
Confidence 4566 777777 677777777777665443
No 285
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=85.30 E-value=0.33 Score=38.52 Aligned_cols=70 Identities=11% Similarity=-0.054 Sum_probs=39.5
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++++.|+.+.......+.. -...+.+.+..+++|.|++.+.+.+ ...++.+++.|+.+|+++...
T Consensus 19 ~gi~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~~~~~~iPvV~~~~~~ 88 (276)
T 2h0a_A 19 EGIEGVLLEQRYDLALFPILSLAR---LKRYLENTTLAYLTDGLILASYDLT-ERFEEGRLPTERPVVLVDAQN 88 (276)
T ss_dssp HHHHHHHGGGTCEEEECCCCSCCC---CC---------CCCSEEEEESCCCC-------CCSCSSCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCchh---hHHHHHHHHHhCCCCEEEEecCCCC-HHHHHHHhhcCCCEEEEeccC
Confidence 467788888898887654332211 1112233333689999999876644 367778888999999998753
No 286
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=84.60 E-value=0.4 Score=36.83 Aligned_cols=24 Identities=25% Similarity=0.169 Sum_probs=13.9
Q ss_pred CCCcccccc--cCCCcccCchHHHHHHH
Q 046085 29 AEPYVLVIV--EGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 29 ~epy~~C~V--CGdrkf~t~~kL~kHFk 54 (230)
..|| .|++ || ..|.+...|.+|.+
T Consensus 132 ~~~~-~C~~~~C~-k~F~~~~~L~~H~~ 157 (190)
T 1tf6_A 132 QLPY-ECPHEGCD-KRFSLPSRLKRHEK 157 (190)
T ss_dssp SCSS-BCCSSSCC-CBCSSHHHHHHHHT
T ss_pred CCCc-cCCCCCCC-chhcCHHHHHHHHH
Confidence 4456 6655 66 66666666666653
No 287
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=84.35 E-value=0.98 Score=36.38 Aligned_cols=75 Identities=17% Similarity=0.182 Sum_probs=49.2
Q ss_pred hhhhcEEEEEccccchH----HH----HHHHHHHHHHHhhcCcceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCC
Q 046085 110 LKRVWFWVRTMSDKLQA----AD----VLLRNYMVDMMDKRRFGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMND 178 (230)
Q Consensus 110 LrRAGv~VrtV~dKpqA----AD----~AL~~~m~~~m~~r~vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~ 178 (230)
+.|.|+.+..++|.... .| ..++......+ ..=|+++++|-. .+-..+++.|+++|++||.|-+...
T Consensus 92 ~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~ 169 (212)
T 2i2w_A 92 ENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVG--REGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDG 169 (212)
T ss_dssp TTSSSCSEEECCCTTCGGGGSCCCSCSSHHHHHHHHHC--CTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTC
T ss_pred ccCCCCeEEecCChHHhhHhhccCCHHHHHHHHHHhcC--CCCCEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCC
Confidence 45688888877633211 00 01122222223 245778888753 4567788999999999999998766
Q ss_pred chhhhhhh
Q 046085 179 GTLKRIAD 186 (230)
Q Consensus 179 ~aL~r~AD 186 (230)
..|.+.||
T Consensus 170 s~La~~aD 177 (212)
T 2i2w_A 170 GKMAGTAD 177 (212)
T ss_dssp GGGTTCSS
T ss_pred CchHHhCC
Confidence 78999999
No 288
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=84.32 E-value=0.53 Score=37.99 Aligned_cols=64 Identities=2% Similarity=-0.101 Sum_probs=45.5
Q ss_pred CchhhhhhhhcEE-EEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFW-VRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~-VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+. +.......+. .....+.+.+..+++|.|++++ ..+..+.+.|+.+|+++..
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiIi~~------~~~~~~~~~~iPvV~~~~~ 94 (277)
T 3hs3_A 30 DGIQEVIQKEGYTALISFSTNSDV---KKYQNAIINFENNNVDGIITSA------FTIPPNFHLNTPLVMYDSA 94 (277)
T ss_dssp HHHHHHHHHTTCEEEEEECSSCCH---HHHHHHHHHHHHTTCSEEEEEC------CCCCTTCCCSSCEEEESCC
T ss_pred HHHHHHHHHCCCCEEEEEeCCCCh---HHHHHHHHHHHhCCCCEEEEcc------hHHHHHHhCCCCEEEEccc
Confidence 4677889999999 7655444333 3334445555578999999998 2355677889999999876
No 289
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=84.03 E-value=0.38 Score=32.10 Aligned_cols=25 Identities=12% Similarity=0.086 Sum_probs=15.2
Q ss_pred CCCCcccccc--cCCCcccCchHHHHHHH
Q 046085 28 PAEPYVLVIV--EGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 28 p~epy~~C~V--CGdrkf~t~~kL~kHFk 54 (230)
.+.|| .|.+ || ..|.+...|..|.+
T Consensus 2 ~~~~~-~C~~~~C~-~~f~~~~~l~~H~~ 28 (89)
T 2wbs_A 2 RTATH-TCDYAGCG-KTYTKSSHLKAHLR 28 (89)
T ss_dssp -CCCE-ECCSTTTC-CEESSHHHHHHHHT
T ss_pred CCCCe-eCCCCCCC-CcCCCHHHHHHHHH
Confidence 34556 6666 66 66666666666654
No 290
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.91 E-value=0.57 Score=32.75 Aligned_cols=24 Identities=8% Similarity=0.011 Sum_probs=22.2
Q ss_pred CCCcccccccCCCcccCchHHHHHHH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFk 54 (230)
..+| .|+-|| ..|.--+.|.+|.|
T Consensus 10 ~~~~-~CPrCn-~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 10 GGRK-ICPRCN-AQFRVTEALRGHMC 33 (49)
T ss_dssp SSCC-CCTTTC-CCCSSHHHHHHHHH
T ss_pred CCce-eCCccc-ccccchHHHHhhhh
Confidence 3688 999999 99999999999988
No 291
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=83.90 E-value=1.4 Score=34.00 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=48.3
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc---chHHHHHHHHHcCCeEEEecCCCCchhh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS---DFVEVLQEATLRCLKTGVAGYMNDGTLK 182 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS---DF~~lLr~ARer~l~TVVVGd~~~~aL~ 182 (230)
++..|.+.|+.|..+++- . + ..+ ..=|+++++|-.- +...+++.|+++|+++|.|-+.... |.
T Consensus 58 ~~~~l~~~g~~~~~~~~~-~---------~-~~~--~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s-l~ 123 (180)
T 1jeo_A 58 FAMRLMHLGFKSYFVGET-T---------T-PSY--EKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCECGN-VV 123 (180)
T ss_dssp HHHHHHHTTCCEEETTST-T---------C-CCC--CTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEEEEESSCCG-GG
T ss_pred HHHHHHHcCCeEEEeCCC-c---------c-ccC--CCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCh-HH
Confidence 345677899999887653 1 0 112 2347788887543 4567788999999999999987556 99
Q ss_pred hhhh
Q 046085 183 RIAD 186 (230)
Q Consensus 183 r~AD 186 (230)
+.||
T Consensus 124 ~~ad 127 (180)
T 1jeo_A 124 EFAD 127 (180)
T ss_dssp GGCS
T ss_pred HhCC
Confidence 9999
No 292
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=83.64 E-value=2.6 Score=32.66 Aligned_cols=72 Identities=13% Similarity=-0.008 Sum_probs=46.9
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcC---CeEEEecCC-CCchh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRC---LKTGVAGYM-NDGTL 181 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~---l~TVVVGd~-~~~aL 181 (230)
+-..|+.+|+.+-.+|.++... ...+ +...|++ ++-+.-+.-..+.+.+.+-| -.+++|||+ +|-..
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~----~~~~---~~~lgi~--~~~~~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~ 117 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPV----VAAR---ARKLKIP--VLHGIDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPC 117 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHH----HHHH---HHHHTCC--EEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCeEEEEECcChHH----HHHH---HHHcCCe--eEeCCCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHH
Confidence 5678999999999999888751 1222 3344777 33444444444444444455 468999999 77777
Q ss_pred hhhhh
Q 046085 182 KRIAD 186 (230)
Q Consensus 182 ~r~AD 186 (230)
.+.|+
T Consensus 118 ~~~ag 122 (176)
T 3mmz_A 118 FALVG 122 (176)
T ss_dssp HHHSS
T ss_pred HHHCC
Confidence 77777
No 293
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=83.26 E-value=1.6 Score=37.87 Aligned_cols=73 Identities=18% Similarity=0.125 Sum_probs=32.2
Q ss_pred hhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 111 KRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 111 rRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
++.+|.+++.+.+-++.. +..++...+...++++.+..+... +...+.+.+-..+...||+..+ ||++..+++
T Consensus 25 ~~i~vI~NP~sg~~~~~~--~~~~i~~~L~~~g~~~~~~~t~~~~~a~~~~~~~~~~~~d~vvv~GG-DGTv~~v~~ 98 (337)
T 2qv7_A 25 KRARIIYNPTSGKEQFKR--ELPDALIKLEKAGYETSAYATEKIGDATLEAERAMHENYDVLIAAGG-DGTLNEVVN 98 (337)
T ss_dssp EEEEEEECTTSTTSCHHH--HHHHHHHHHHHTTEEEEEEECCSTTHHHHHHHHHTTTTCSEEEEEEC-HHHHHHHHH
T ss_pred ceEEEEECCCCCCCchHH--HHHHHHHHHHHcCCeEEEEEecCcchHHHHHHHHhhcCCCEEEEEcC-chHHHHHHH
Confidence 445555554444333321 224444445445555555444432 3334444444444444444333 344555444
No 294
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=82.83 E-value=1.7 Score=34.20 Aligned_cols=44 Identities=16% Similarity=0.183 Sum_probs=36.2
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhh---hh
Q 046085 143 RFGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRI---AD 186 (230)
Q Consensus 143 ~vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~---AD 186 (230)
.=|+++++|-. .+...+++.|+++|++||.|-+.....|.+. ||
T Consensus 113 ~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad 162 (199)
T 1x92_A 113 PGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPED 162 (199)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCC
Confidence 34777777753 4567789999999999999998867789999 99
No 295
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=82.64 E-value=0.46 Score=33.77 Aligned_cols=21 Identities=10% Similarity=0.007 Sum_probs=10.5
Q ss_pred Cccccc--ccCCCcccCchHHHHHH
Q 046085 31 PYVLVI--VEGDLRLYNNDKLVNHF 53 (230)
Q Consensus 31 py~~C~--VCGdrkf~t~~kL~kHF 53 (230)
|| .|+ .|| ..|.+...|.+|.
T Consensus 5 ~~-~C~~~~C~-~~f~~~~~l~~H~ 27 (124)
T 1ubd_C 5 TI-ACPHKGCT-KMFRDNSAMRKHL 27 (124)
T ss_dssp CE-ECCSTTCC-CEESSHHHHHHHH
T ss_pred cc-cCCCCCCc-CccCCHHHHHHHH
Confidence 44 454 455 5555555555553
No 296
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=82.59 E-value=0.51 Score=36.25 Aligned_cols=27 Identities=19% Similarity=0.358 Sum_probs=15.0
Q ss_pred CCCccccc--ccCCCcccCchHHHHHHHHHh
Q 046085 29 AEPYVLVI--VEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 29 ~epy~~C~--VCGdrkf~t~~kL~kHFkqlH 57 (230)
..|| .|. .|| ..|.+...|.+|.+..|
T Consensus 70 ~~~~-~C~~~~C~-~~f~~~~~l~~H~~~~h 98 (190)
T 1tf6_A 70 EKNF-TCDSDGCD-LRFTTKANMKKHFNRFH 98 (190)
T ss_dssp CCCE-ECCSSSCC-CEESCHHHHHHHHHTTS
T ss_pred CCce-eCCCCCCC-CccCCHHHHHHHHHHhc
Confidence 3455 555 555 55555555555555555
No 297
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=82.58 E-value=1.6 Score=34.87 Aligned_cols=68 Identities=18% Similarity=0.183 Sum_probs=50.1
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLK 182 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~ 182 (230)
++..|.+.|+.|..++|- .+ ..+ ..=|+++++|-. .+...+++.|+++|+++|.|-+.....|.
T Consensus 65 ~~~~l~~~g~~~~~~~~~-~~----------~~~--~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La 131 (200)
T 1vim_A 65 FAMRLMHLGYTVYVVGET-VT----------PRI--TDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLA 131 (200)
T ss_dssp HHHHHHHTTCCEEETTST-TC----------CCC--CTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEESCTTSHHH
T ss_pred HHHHHHhcCCeEEEeCCc-cc----------cCC--CCCCEEEEEeCCCCcHHHHHHHHHHHHCCCeEEEEECCCCChHH
Confidence 445677889999887652 11 012 234778888754 45677889999999999999998667899
Q ss_pred hhhh
Q 046085 183 RIAD 186 (230)
Q Consensus 183 r~AD 186 (230)
+.||
T Consensus 132 ~~ad 135 (200)
T 1vim_A 132 KMAD 135 (200)
T ss_dssp HHCS
T ss_pred HhCC
Confidence 9999
No 298
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=82.19 E-value=4.2 Score=33.80 Aligned_cols=69 Identities=10% Similarity=0.006 Sum_probs=43.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHH-cCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATL-RCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARe-r~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. .-...+.+.|..+++|.|++++.+.+ ..++..+.+ .|+.+|+++..
T Consensus 78 ~gi~~~a~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 147 (340)
T 1qpz_A 78 EAVEKNCFQKGYTLILGNAWNNL---EKQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWG 147 (340)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHTTTTSCEEEEEES
T ss_pred HHHHHHHHHcCCEEEEEeCCCCH---HHHHHHHHHHHcCCCCEEEEeCCCCC-hHHHHHHHhhCCCCEEEEecc
Confidence 47778888899988754332222 22333344444689999999876543 123444444 79999999865
No 299
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=82.17 E-value=1.4 Score=30.34 Aligned_cols=40 Identities=23% Similarity=0.185 Sum_probs=30.0
Q ss_pred HHHHHHhcCccCC---C-CCccccc--ccCCCcccCchHHHHHHHHHh
Q 046085 16 LFNQLEIKGVIRP---A-EPYVLVI--VEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 16 ~l~~le~~g~i~p---~-epy~~C~--VCGdrkf~t~~kL~kHFkqlH 57 (230)
+...+++..+-.+ + +|| .|. -|+ +.++...+|++|.+.-|
T Consensus 19 l~~Hv~~~Hv~~~~~~~~~~~-~C~W~~C~-~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 19 LQRHLLKDHVSQDFKHPMEPL-ACNWEDCD-FLGDDTASIVNHINAQH 64 (64)
T ss_dssp HHHHHHHHSCCCCCCCSSCCE-ECCCSSCC-CEESSHHHHHHHHHHHC
T ss_pred HHHHHHhhccCcccCCCCCCC-EeeCCCCc-CCCCChHHHHhhccccC
Confidence 3445666665554 3 488 997 999 99999999999998765
No 300
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=82.17 E-value=1.7 Score=33.42 Aligned_cols=73 Identities=7% Similarity=0.007 Sum_probs=49.6
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc---chHHHHHHHHHcCCeEEEecCCCCchhh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS---DFVEVLQEATLRCLKTGVAGYMNDGTLK 182 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS---DF~~lLr~ARer~l~TVVVGd~~~~aL~ 182 (230)
++..|.+.|..+..+.+--. +...+ ..+ ..=|+++++|-.- +...+++.|+++|+++|.|-+.....|.
T Consensus 67 ~~~~l~~~g~~~~~~~~~~~-----~~~~~-~~~--~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~la 138 (183)
T 2xhz_A 67 MAATFASTGTPSFFVHPGEA-----AHGDL-GMV--TPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMA 138 (183)
T ss_dssp HHHHHHTTTCCEEECCTTHH-----HHHTS-TTC--CTTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESCTTSHHH
T ss_pred HHHHHHhcCceEEEeCchHH-----hhhhh-ccC--CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChhH
Confidence 45567788999987764211 11100 111 2347788887543 4566788899999999999987667899
Q ss_pred hhhh
Q 046085 183 RIAD 186 (230)
Q Consensus 183 r~AD 186 (230)
+.||
T Consensus 139 ~~ad 142 (183)
T 2xhz_A 139 RAAD 142 (183)
T ss_dssp HHSS
T ss_pred HhCC
Confidence 9999
No 301
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.15 E-value=0.087 Score=33.94 Aligned_cols=27 Identities=4% Similarity=-0.199 Sum_probs=21.7
Q ss_pred CCCcccccccCCCcccCchHHHHHHHHHhH
Q 046085 29 AEPYVLVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 29 ~epy~~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
..|| .|.+|| ..|.+...|..|.+ +|.
T Consensus 37 ~~~~-~C~~C~-~~f~~~~~l~~H~~-~H~ 63 (73)
T 2ctu_A 37 RKTP-MCEKCR-KDSCQEAALNKDEG-NES 63 (73)
T ss_dssp SSSC-CCHHHH-HTCSCCCSSCCCSS-CCC
T ss_pred CCCC-CCCCCC-hhhcCHHHHHHHHH-hhc
Confidence 5688 999999 99999999998853 353
No 302
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=82.10 E-value=1.6 Score=35.34 Aligned_cols=44 Identities=16% Similarity=0.170 Sum_probs=37.2
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhh---h
Q 046085 143 RFGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIA---D 186 (230)
Q Consensus 143 ~vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~A---D 186 (230)
.=|+++.+|-. .+-..+++.|+++|++||.|-+.....|.+.| |
T Consensus 114 ~~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d 163 (201)
T 3trj_A 114 EDDILLVITTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDD 163 (201)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTC
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCC
Confidence 45888888864 56778899999999999999887667999999 9
No 303
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=81.49 E-value=1.3 Score=35.07 Aligned_cols=73 Identities=11% Similarity=0.111 Sum_probs=49.2
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc---chHHHHHHHHHcCCeEEEecCCCCchhh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS---DFVEVLQEATLRCLKTGVAGYMNDGTLK 182 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS---DF~~lLr~ARer~l~TVVVGd~~~~aL~ 182 (230)
++..|.+.|+.|..+++. + ........+ ..=|+++++|-.- +...+++.|+++|+++|.|-+.....|.
T Consensus 63 ~~~~l~~~g~~~~~~~~~----~--~~~~~~~~~--~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~ 134 (201)
T 3fxa_A 63 LVHSFNCIERPAVFLTPS----D--AVHGTLGVL--QKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIA 134 (201)
T ss_dssp HHHHHHHTTCCEEECCHH----H--HTTTGGGGC--CTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEESCTTSHHH
T ss_pred HHHHHHhcCCcEEEeCch----H--HHhhhhhcC--CCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEEECCCCChhH
Confidence 344678889999877531 1 000000112 1237777777643 4556779999999999999998667899
Q ss_pred hhhh
Q 046085 183 RIAD 186 (230)
Q Consensus 183 r~AD 186 (230)
+.||
T Consensus 135 ~~ad 138 (201)
T 3fxa_A 135 KEAD 138 (201)
T ss_dssp HHCS
T ss_pred HhCC
Confidence 9999
No 304
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=81.39 E-value=4.5 Score=27.92 Aligned_cols=72 Identities=14% Similarity=-0.010 Sum_probs=48.8
Q ss_pred CCchhhhhhhhc-EEEEEccccchHHHHHH-------------HHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCC
Q 046085 103 GYSLVVKLKRVW-FWVRTMSDKLQAADVLL-------------RNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCL 168 (230)
Q Consensus 103 gygLa~eLrRAG-v~VrtV~dKpqAAD~AL-------------~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l 168 (230)
|..++..|.+.| +.|..+...|+.++... ...+.+.+ .++|.++..........++..+.+.|+
T Consensus 17 G~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~vi~~~~~~~~~~~~~~~~~~g~ 94 (118)
T 3ic5_A 17 GQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL--GGFDAVISAAPFFLTPIIAKAAKAAGA 94 (118)
T ss_dssp HHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHT--TTCSEEEECSCGGGHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHH--cCCCEEEECCCchhhHHHHHHHHHhCC
Confidence 356788888889 77776665555443322 12333444 378888887766667788888888999
Q ss_pred eEEEecCC
Q 046085 169 KTGVAGYM 176 (230)
Q Consensus 169 ~TVVVGd~ 176 (230)
+.+.++..
T Consensus 95 ~~~~~~~~ 102 (118)
T 3ic5_A 95 HYFDLTED 102 (118)
T ss_dssp EEECCCSC
T ss_pred CEEEecCc
Confidence 88877764
No 305
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=81.22 E-value=2 Score=33.50 Aligned_cols=44 Identities=20% Similarity=0.232 Sum_probs=35.6
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhh---hh
Q 046085 143 RFGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRI---AD 186 (230)
Q Consensus 143 ~vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~---AD 186 (230)
.=|+++++|-. .+-..+++.|+++|++||.|-+.....|.+. ||
T Consensus 109 ~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad 158 (196)
T 2yva_A 109 AGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQD 158 (196)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTS
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCC
Confidence 44777777754 4567788999999999999998866789999 88
No 306
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=80.72 E-value=2.3 Score=35.81 Aligned_cols=68 Identities=9% Similarity=-0.041 Sum_probs=44.0
Q ss_pred hhhhhhhhcEEEE---EccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCe---EEEecCC
Q 046085 106 LVVKLKRVWFWVR---TMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLK---TGVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~Vr---tV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~---TVVVGd~ 176 (230)
+...|+++|+.|. .++..+...|.. ..+.+++ +.+.+.|++.+++.+...+++.+++.|++ ..++|..
T Consensus 160 ~~~~l~~~G~~v~~~~~~~~~~~~~d~~--~~~~~l~-~~~pdaI~~~~~~~~a~~~~~~~~~~G~~~~~~~~~~~~ 233 (385)
T 1pea_A 160 MRHLYRQHGGTVLEEIYIPLYPSDDDLQ--RAVERIY-QARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLT 233 (385)
T ss_dssp HHHHHHHTTCEEEEEEEECSSCCHHHHH--HHHHHHH-HHTCSEEEEECCTHHHHHHHHHHHHHHCSSCCCCEEESS
T ss_pred HHHHHHHcCCEEEEEEeecCCCCcchHH--HHHHHHH-HCCCCEEEEecccccHHHHHHHHHHcCCCcCCceEEecc
Confidence 3455666676543 233222344432 3344444 35899999988888999999999999998 4456654
No 307
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=80.25 E-value=1 Score=30.65 Aligned_cols=26 Identities=8% Similarity=-0.058 Sum_probs=17.8
Q ss_pred CCCCCcccccc--cCCCcccCchHHHHHHH
Q 046085 27 RPAEPYVLVIV--EGDLRLYNNDKLVNHFK 54 (230)
Q Consensus 27 ~p~epy~~C~V--CGdrkf~t~~kL~kHFk 54 (230)
.+..|| .|.+ || ..|.+...|.+|.+
T Consensus 11 ~~~~~~-~C~~~~C~-~~f~~~~~l~~H~~ 38 (100)
T 2ebt_A 11 EKRRIH-YCDYPGCT-KVYTKSSHLKAHLR 38 (100)
T ss_dssp CSCCCE-ECCSSSCC-CEESCHHHHHHHHH
T ss_pred ccCcce-EcCCCCCC-CcccCHHHHHHHHH
Confidence 344566 7776 77 77777777777765
No 308
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=80.06 E-value=8.4 Score=29.44 Aligned_cols=83 Identities=10% Similarity=-0.058 Sum_probs=48.9
Q ss_pred hhhhhhhhcEEEEEccccch--HHHHHHHHHHHHHHhhcC----cceEEEEcCCcchHHHHHHHHHcCC---eEEEecCC
Q 046085 106 LVVKLKRVWFWVRTMSDKLQ--AADVLLRNYMVDMMDKRR----FGCLVFVSDDSDFVEVLQEATLRCL---KTGVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpq--AAD~AL~~~m~~~m~~r~----vdclvLVSDDSDF~~lLr~ARer~l---~TVVVGd~ 176 (230)
+-..|+..|+.+-.+|..+. .+...| ...+ ++.++. +..++-..+...+++-|+ .+++|||.
T Consensus 76 ~L~~L~~~G~~v~ivT~~~~~~~~~~~l--------~~~gl~~~f~~~~~-~~~~k~~~~~~~~~~~~~~~~~~~~igD~ 146 (187)
T 2wm8_A 76 VLKRLQSLGVPGAAASRTSEIEGANQLL--------ELFDLFRYFVHREI-YPGSKITHFERLQQKTGIPFSQMIFFDDE 146 (187)
T ss_dssp HHHHHHHHTCCEEEEECCSCHHHHHHHH--------HHTTCTTTEEEEEE-SSSCHHHHHHHHHHHHCCCGGGEEEEESC
T ss_pred HHHHHHHCCceEEEEeCCCChHHHHHHH--------HHcCcHhhcceeEE-EeCchHHHHHHHHHHcCCChHHEEEEeCC
Confidence 45678888999988998872 322222 2223 344433 344454445555566676 48999998
Q ss_pred -CCchhhhhhh----ccccccchHHH
Q 046085 177 -NDGTLKRIAD----RLKWAYNSEVE 197 (230)
Q Consensus 177 -~~~aL~r~AD----~leW~~~~e~e 197 (230)
++-.-.+.|. ++.|.+.++.-
T Consensus 147 ~~Di~~a~~aG~~~i~v~~g~~~~~~ 172 (187)
T 2wm8_A 147 RRNIVDVSKLGVTCIHIQNGMNLQTL 172 (187)
T ss_dssp HHHHHHHHTTTCEEEECSSSCCHHHH
T ss_pred ccChHHHHHcCCEEEEECCCCChHHH
Confidence 3223344444 67888876553
No 309
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=79.30 E-value=2.6 Score=34.42 Aligned_cols=73 Identities=16% Similarity=0.066 Sum_probs=51.3
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCC---cchHHHHHHHHH--cCCeEEEecCCCCch
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDD---SDFVEVLQEATL--RCLKTGVAGYMNDGT 180 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDD---SDF~~lLr~ARe--r~l~TVVVGd~~~~a 180 (230)
++..|.+.|+.|..+++.-... .....+ ..=|+++++|-. .+...+++.|++ +|+++|.|-+.....
T Consensus 77 ~~~~l~~lg~~~~~~~~~~~~~------~~~~~~--~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~ 148 (220)
T 3etn_A 77 IATTFCSTGIPSVFLHPSEAQH------GDLGIL--QENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSP 148 (220)
T ss_dssp HHHHHHHTTCCEEECCTTGGGB------TGGGGC--CTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSH
T ss_pred HHHHHHhcCCcEEEeCCHHHHH------hhhccC--CCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCCh
Confidence 5667889999999876542110 000112 123777777754 456678899999 999999999886678
Q ss_pred hhhhhh
Q 046085 181 LKRIAD 186 (230)
Q Consensus 181 L~r~AD 186 (230)
|.+.||
T Consensus 149 La~~aD 154 (220)
T 3etn_A 149 LASESD 154 (220)
T ss_dssp HHHHSS
T ss_pred hHHhCC
Confidence 999999
No 310
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=78.79 E-value=1.7 Score=34.83 Aligned_cols=67 Identities=9% Similarity=0.087 Sum_probs=43.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+.......+. .....+.+.+..+++|.|++.+.+.+- ..+..+ .|+.+|+++..
T Consensus 27 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiI~~~~~~~~-~~~~~l--~~iPvV~~~~~ 93 (288)
T 2qu7_A 27 TEISHECQKHHLHVAVASSEENE---DKQQDLIETFVSQNVSAIILVPVKSKF-QMKREW--LKIPIMTLDRE 93 (288)
T ss_dssp HHHHHHHGGGTCEEEEEECTTCH---HHHHHHHHHHHHTTEEEEEECCSSSCC-CCCGGG--GGSCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCH---HHHHHHHHHHHHcCccEEEEecCCCCh-HHHHHh--cCCCEEEEecc
Confidence 46677788888888755433222 333334444446899999998765431 334444 79999999865
No 311
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=78.43 E-value=4.7 Score=33.80 Aligned_cols=71 Identities=11% Similarity=-0.046 Sum_probs=42.6
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++...|+.+........ |........+.|..+++|.|++++...+-..+...+...|+.+|+++..
T Consensus 81 ~gi~~~a~~~g~~~~~~~~~~~--~~~~~~~~l~~l~~~~vdGiIi~~~~~~~~~~~~~~~~~~iPvV~i~~~ 151 (349)
T 1jye_A 81 AAILSRADQLGASVVVSMVERS--GVEACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVS 151 (349)
T ss_dssp HHHHHHHHHTTCEEEEEECCSS--SHHHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSSC
T ss_pred HHHHHHHHHcCCEEEEEeCCCC--cHHHHHHHHHHHHHCCCCEEEEecCCCChhHHHHHHhhCCCCEEEEccc
Confidence 4677888899998875432211 1111222333344689999999843222223445566789999999753
No 312
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=78.42 E-value=9.6 Score=26.73 Aligned_cols=63 Identities=14% Similarity=0.122 Sum_probs=42.3
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHc--CCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLR--CLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer--~l~TVVVGd~~ 177 (230)
-.|...|...|+.|.++++..+|- +.+.....+.++ .. +.+-.++++..++. .+..|+++...
T Consensus 32 ~~l~~~L~~~g~~v~~~~~~~~al---------~~l~~~~~dlvi-~~-~~~g~~~~~~l~~~~~~~~ii~ls~~~ 96 (137)
T 2pln_A 32 GEIEKGLNVKGFMADVTESLEDGE---------YLMDIRNYDLVM-VS-DKNALSFVSRIKEKHSSIVVLVSSDNP 96 (137)
T ss_dssp HHHHHHHHHTTCEEEEESCHHHHH---------HHHHHSCCSEEE-EC-STTHHHHHHHHHHHSTTSEEEEEESSC
T ss_pred HHHHHHHHHcCcEEEEeCCHHHHH---------HHHHcCCCCEEE-Ec-CccHHHHHHHHHhcCCCccEEEEeCCC
Confidence 356777888899998777654442 223345678887 44 44445777777775 78888888764
No 313
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=78.36 E-value=1.6 Score=36.14 Aligned_cols=69 Identities=6% Similarity=0.008 Sum_probs=44.2
Q ss_pred chhhhhhhhcEEEE-EccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVR-TMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~Vr-tV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
|+...|+.+|+.|- ...-.+...|.. ..+..+. +.+.+.|++.+.|.+...+++.+++.|++.-++|.+
T Consensus 170 ~~~~~l~~~G~~v~~~~~~~~~~~d~~--~~~~~l~-~~~~dai~~~~~~~~a~~~~~~~~~~g~~vp~~~~~ 239 (375)
T 4evq_A 170 GFKKSFTAGKGEVVKDITIAFPDVEFQ--SALAEIA-SLKPDCVYAFFSGGGALKFIKDYAAANLGIPLWGPG 239 (375)
T ss_dssp HHHHHHHHTTCEEEEEEEECTTCCCCH--HHHHHHH-HHCCSEEEEECCTHHHHHHHHHHHHTTCCCCEEEEG
T ss_pred HHHHHHHHcCCeEEEEEecCCCCccHH--HHHHHHH-hcCCCEEEEecCcchHHHHHHHHHHcCCCceEEecC
Confidence 44556677776553 111111222221 2222233 458899999899999999999999999998888754
No 314
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=76.31 E-value=4.3 Score=36.48 Aligned_cols=69 Identities=7% Similarity=0.003 Sum_probs=47.0
Q ss_pred hhhhhhhhcEEEE---EccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 106 LVVKLKRVWFWVR---TMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~Vr---tV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
+..++++.|+-|- +++..+...|. ...+...|.+-+.+.|++.++..++..+++.|++.|+..+.||-.
T Consensus 205 ~~~~~~~~Gi~v~~~~~i~~~~~~~d~--~~~l~~~i~~s~a~vIi~~~~~~~~~~l~~~~~~~g~~~~wI~s~ 276 (479)
T 3sm9_A 205 FEQEARLRNISIATAEKVGRSNIRKSY--DSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASFTWVASD 276 (479)
T ss_dssp HHHHHHTTTCEEEEEEEECC--CHHHH--HHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEECT
T ss_pred HHHHHHHCCceEEEEEEcCCCCChHHH--HHHHHHHHhcCCCeEEEEEcChHHHHHHHHHHHHhCCEEEEEEec
Confidence 3467788897765 34433333343 233324454568999999999999999999999999975555543
No 315
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=76.17 E-value=1.3 Score=36.77 Aligned_cols=69 Identities=7% Similarity=-0.074 Sum_probs=46.3
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
++...|+.+|+.|....-.+...|.. ..+..+. +.+.+.|++.+.+.+...+++.+++.|++.-++|..
T Consensus 169 ~~~~~~~~~G~~v~~~~~~~~~~d~~--~~~~~l~-~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 237 (366)
T 3td9_A 169 FFINKFTELGGQVKRVFFRSGDQDFS--AQLSVAM-SFNPDAIYITGYYPEIALISRQARQLGFTGYILAGD 237 (366)
T ss_dssp HHHHHHHHTTCEEEEEEECTTCCCCH--HHHHHHH-HTCCSEEEECSCHHHHHHHHHHHHHTTCCSEEEECG
T ss_pred HHHHHHHHCCCEEEEEEeCCCCccHH--HHHHHHH-hcCCCEEEEccchhHHHHHHHHHHHcCCCceEEeeC
Confidence 45556677777654322112222321 2233334 478999999899999999999999999998888753
No 316
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=75.99 E-value=5.6 Score=29.51 Aligned_cols=73 Identities=10% Similarity=-0.022 Sum_probs=43.0
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCC---eEEEecCC-CCchh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCL---KTGVAGYM-NDGTL 181 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l---~TVVVGd~-~~~aL 181 (230)
+-..|++.|+.+-.+|..+.. .+...+...|++.++-.. -++-..+...+++-|+ .+++|||+ +|-..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~-------~~~~~~~~~gl~~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~ 110 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTE-------IVRRRAEKLKVDYLFQGV-VDKLSAAEELCNELGINLEQVAYIGDDLNDAKL 110 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCH-------HHHHHHHHTTCSEEECSC-SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHH
T ss_pred HHHHHHHCCCEEEEEeCCChH-------HHHHHHHHcCCCEeeccc-CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence 357788999999989988864 122223344665433222 2333333333444454 68899998 66666
Q ss_pred hhhhh
Q 046085 182 KRIAD 186 (230)
Q Consensus 182 ~r~AD 186 (230)
.+.|+
T Consensus 111 ~~~ag 115 (164)
T 3e8m_A 111 LKRVG 115 (164)
T ss_dssp HTTSS
T ss_pred HHHCC
Confidence 66666
No 317
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=75.87 E-value=1.1 Score=28.05 Aligned_cols=18 Identities=11% Similarity=-0.149 Sum_probs=14.3
Q ss_pred CCCCCcccccccCCCcccCc
Q 046085 27 RPAEPYVLVIVEGDLRLYNN 46 (230)
Q Consensus 27 ~p~epy~~C~VCGdrkf~t~ 46 (230)
....|| .|.+|| ..|..|
T Consensus 37 ~~~k~~-~C~~C~-k~F~~~ 54 (54)
T 2eps_A 37 TSERPH-KCQVWV-SGPSSG 54 (54)
T ss_dssp CCCCCC-CSSSSC-CSSCCC
T ss_pred CCCCCc-cCCCCC-CCCCCC
Confidence 346789 999999 888764
No 318
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=75.58 E-value=4.9 Score=34.82 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=35.8
Q ss_pred hhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 110 LKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 110 LrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
.+|.+|.+++.+.+-+ ...++...+...+++..+..+... +...+.+.+-..+...|||-.+ ||++.++++
T Consensus 29 ~~~~~vi~Np~sg~~~-----~~~~i~~~l~~~g~~~~~~~t~~~~~~~~~~~~~~~~~~d~vvv~GG-DGTl~~v~~ 100 (332)
T 2bon_A 29 FPASLLILNGKSTDNL-----PLREAIMLLREEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGG-DGTINEVST 100 (332)
T ss_dssp -CCEEEEECSSSTTCH-----HHHHHHHHHHTTTCCEEEEECCSTTHHHHHHHHHHHHTCSEEEEEES-HHHHHHHHH
T ss_pred cceEEEEECCCCCCCc-----hHHHHHHHHHHcCCcEEEEEecCcchHHHHHHHHHhcCCCEEEEEcc-chHHHHHHH
Confidence 4566666665554331 223455555556666665555433 3444444444445554444333 455655554
No 319
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=75.48 E-value=2.1 Score=34.80 Aligned_cols=67 Identities=16% Similarity=0.080 Sum_probs=42.3
Q ss_pred hhhhhhhhcEEEEEc-cccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecC
Q 046085 106 LVVKLKRVWFWVRTM-SDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGY 175 (230)
Q Consensus 106 La~eLrRAGv~VrtV-~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd 175 (230)
+...|++.|+-|... .-.+...|.. ..+.+++ +.+.+.|++.+++.+...+++.+++.|++.-++|.
T Consensus 158 ~~~~l~~~g~~v~~~~~~~~~~~d~~--~~~~~l~-~~~~d~i~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (346)
T 1usg_A 158 VQDGLKAANANVVFFDGITAGEKDFS--ALIARLK-KENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 225 (346)
T ss_dssp HHHHHHHTTCCEEEEEECCTTCCCCH--HHHHHHH-HTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHcCCEEEEEeccCCCCcCHH--HHHHHHH-hcCCCEEEEcCcchHHHHHHHHHHHcCCCCeEEec
Confidence 445566667654321 1111222221 2333344 46789999998889999999999999998767764
No 320
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=75.25 E-value=0.99 Score=37.01 Aligned_cols=77 Identities=14% Similarity=0.103 Sum_probs=47.1
Q ss_pred CchhhhhhhhcEEEEEccc---cchHHHHHHHHHHHHHHhhcCcceEEEEcCCc--chHHHHHHH-----HHc-CCeEEE
Q 046085 104 YSLVVKLKRVWFWVRTMSD---KLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS--DFVEVLQEA-----TLR-CLKTGV 172 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~d---KpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS--DF~~lLr~A-----Rer-~l~TVV 172 (230)
-.|+..|+.+|+.|..++- .|...+ ...+.+.+....+|++++-|... .|..++... .-. +++.++
T Consensus 144 ~~L~~~L~~~G~~v~~~~~Y~~~~~~~~---~~~~~~~l~~~~~d~v~ftS~~~v~~~~~~~~~~~~~~~~l~~~~~~~a 220 (261)
T 1wcw_A 144 PLLENALAERGYRVLPLMPYRHLPDPEG---ILRLEEALLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALA 220 (261)
T ss_dssp HHHHHHHHHTTEEEEEECSEEEEECHHH---HHHHHHHHHHTCCSEEEECSHHHHHHHHHHCSCHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHCCCEEEEEeeEEEecCCcc---HHHHHHHHHcCCCCEEEEECHHHHHHHHHHHhhccchhHHhhcCCEEEE
Confidence 4588999999999985543 233221 22333445456789888877654 244433211 124 788999
Q ss_pred ecCCCCchhhh
Q 046085 173 AGYMNDGTLKR 183 (230)
Q Consensus 173 VGd~~~~aL~r 183 (230)
||..+-.++..
T Consensus 221 IG~~Ta~~l~~ 231 (261)
T 1wcw_A 221 VGRVTADALRE 231 (261)
T ss_dssp ESHHHHHHHHH
T ss_pred ECHHHHHHHHH
Confidence 99986555554
No 321
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=74.82 E-value=5.9 Score=32.98 Aligned_cols=67 Identities=6% Similarity=-0.162 Sum_probs=41.5
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHH-HHHHH-cCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVL-QEATL-RCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lL-r~ARe-r~l~TVVVGd~ 176 (230)
|+...++..|+.+..++..+..++.. ..++.|-.+++|.|+++|. .+.+.+ ..|.+ .++..|+|+..
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~~~~---~~l~~l~~~~vdgIi~~~~--~~~~~~~~~~~~~p~~p~v~id~~ 96 (296)
T 2hqb_A 28 GLLNIHSNLDVDVVLEEGVNSEQKAH---RRIKELVDGGVNLIFGHGH--AFAEYFSTIHNQYPDVHFVSFNGE 96 (296)
T ss_dssp HHHHHHHHSCCEEEEECCCCSHHHHH---HHHHHHHHTTCCEEEECST--HHHHHHHTTTTSCTTSEEEEESCC
T ss_pred HHHHHHHHhCCeEEEEeCCCCHHHHH---HHHHHHHHCCCCEEEEcCH--hHHHHHHHHHHHCCCCEEEEEecC
Confidence 66677888899888665444433322 2333344689999999873 333333 33333 27889999764
No 322
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=74.40 E-value=3 Score=35.02 Aligned_cols=67 Identities=7% Similarity=-0.053 Sum_probs=42.2
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
|+..+++ |+.+..+...++..+ . ...+.+.+..+++|.|++++.+.+ ...+..+.+.|+.+|+||..
T Consensus 94 gi~~~a~--g~~~~~~~~~~~~~~-~-~~~~~~~l~~~~vdGiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 160 (366)
T 3h5t_A 94 GVAQAAG--DTQLTLIPASPASSV-D-HVSAQQLVNNAAVDGVVIYSVAKG-DPHIDAIRARGLPAVIADQP 160 (366)
T ss_dssp HHHHHSS--SCEEEEEECCCCTTC-C-HHHHHHHHHTCCCSCEEEESCCTT-CHHHHHHHHHTCCEEEESSC
T ss_pred HHHHHHh--hCCEEEEEcCCCccH-H-HHHHHHHHHhCCCCEEEEecCCCC-hHHHHHHHHCCCCEEEECCc
Confidence 4555555 666654433332210 0 123344455789999999876333 36778888899999999875
No 323
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=73.56 E-value=5.8 Score=32.28 Aligned_cols=72 Identities=8% Similarity=-0.132 Sum_probs=45.2
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHH-cC---CeEEEecCC-CCch
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATL-RC---LKTGVAGYM-NDGT 180 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARe-r~---l~TVVVGd~-~~~a 180 (230)
+-..|+.+|+.+-.++.+|... ...+ +...|++.++-.. .+. ..+++.+.+ .| -.+++|||+ +|-.
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~----~~~~---l~~lgi~~~f~~~-k~K-~~~l~~~~~~lg~~~~~~~~vGDs~nDi~ 154 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKL----LEDR---ANTLGITHLYQGQ-SDK-LVAYHELLATLQCQPEQVAYIGDDLIDWP 154 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH----HHHH---HHHHTCCEEECSC-SSH-HHHHHHHHHHHTCCGGGEEEEECSGGGHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHH----HHHH---HHHcCCchhhccc-CCh-HHHHHHHHHHcCcCcceEEEEcCCHHHHH
Confidence 5578999999999999988751 1222 3334665433322 223 444544444 34 468999999 7666
Q ss_pred hhhhhh
Q 046085 181 LKRIAD 186 (230)
Q Consensus 181 L~r~AD 186 (230)
..+.|+
T Consensus 155 ~~~~ag 160 (211)
T 3ij5_A 155 VMAQVG 160 (211)
T ss_dssp HHTTSS
T ss_pred HHHHCC
Confidence 677777
No 324
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=73.54 E-value=4.4 Score=31.78 Aligned_cols=66 Identities=8% Similarity=-0.032 Sum_probs=42.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCC-cchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDD-SDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDD-SDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. .-...+.+.+..+++|.|++.+.+ .+. . ...+.+..+|+++..
T Consensus 22 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiI~~~~~~~~~-~---~l~~~~~pvV~~~~~ 88 (255)
T 1byk_A 22 QTMLPAFYEQGYDPIMMESQFSP---QLVAEHLGVLKRRNIDGVVLFGFTGITE-E---MLAHWQSSLVLLARD 88 (255)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCH---HHHHHHHHHHHTTTCCEEEEECCTTCCT-T---TSGGGSSSEEEESSC
T ss_pred HHHHHHHHHcCCEEEEEeCCCcH---HHHHHHHHHHHhcCCCEEEEecCccccH-H---HHHhcCCCEEEEccc
Confidence 47788889999988765433222 222334444546899999998743 332 2 234568889998764
No 325
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=73.37 E-value=2.3 Score=35.55 Aligned_cols=62 Identities=5% Similarity=-0.029 Sum_probs=43.4
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+....... . .....+.+.|..+++|.|++++. +..+.+.|+.+|+|+..
T Consensus 84 ~gi~~~a~~~g~~~~~~~~~~-~---~~~~~~~~~l~~~~vdGiIi~~~-------~~~~~~~~iPvV~~~~~ 145 (333)
T 3jvd_A 84 QTIQQDLKAAGYQMLVAEANS-V---QAQDVVMESLISIQAAGIIHVPV-------VGSIAPEGIPMVQLTRG 145 (333)
T ss_dssp HHHHHHHHHHTCEEEEEECCS-H---HHHHHHHHHHHHHTCSEEEECCC-------TTCCC-CCSCEEEECC-
T ss_pred HHHHHHHHHCCCEEEEECCCC-h---HHHHHHHHHHHhCCCCEEEEcch-------HHHHhhCCCCEEEECcc
Confidence 477888999999888554333 2 22234444455689999999887 66778889999999875
No 326
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=73.28 E-value=1.8 Score=35.55 Aligned_cols=36 Identities=8% Similarity=0.032 Sum_probs=31.9
Q ss_pred hcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 141 KRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 141 ~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
+.+.+.|++.+.+.+...+++.+++.|++.-++|..
T Consensus 191 ~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 226 (356)
T 3ipc_A 191 EAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSGD 226 (356)
T ss_dssp HTTCCEEEEESCHHHHHHHHHHHHHHTCCCEEEECG
T ss_pred hcCCCEEEEccCchHHHHHHHHHHHCCCCCcEEEec
Confidence 468999999999999999999999999998888754
No 327
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=73.14 E-value=1.4 Score=35.13 Aligned_cols=65 Identities=11% Similarity=-0.017 Sum_probs=40.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++++.|+.+..+... +. .-...+.+.|..+++|.|+ ++.+.+ ...+.. .|+.+|+|+...
T Consensus 25 ~gi~~~a~~~g~~~~~~~~~-~~---~~~~~~~~~l~~~~vdgiI-~~~~~~-~~~~~~---~~iPvV~~~~~~ 89 (280)
T 3gyb_A 25 QSLSDVLTPKGYRLSVIDSL-TS---QAGTDPITSALSMRPDGII-IAQDIP-DFTVPD---SLPPFVIAGTRI 89 (280)
T ss_dssp HHHHHHHGGGTCEEEEECSS-SS---CSSSCHHHHHHTTCCSEEE-EESCC------------CCCEEEESCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC-Cc---hHHHHHHHHHHhCCCCEEE-ecCCCC-hhhHhh---cCCCEEEECCCC
Confidence 46778889999999866554 22 1122233334468999999 877666 334444 899999998764
No 328
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=72.93 E-value=7.2 Score=31.27 Aligned_cols=71 Identities=10% Similarity=0.019 Sum_probs=44.5
Q ss_pred hhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCC---eEEEecCC-CCchhhh
Q 046085 108 VKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCL---KTGVAGYM-NDGTLKR 183 (230)
Q Consensus 108 ~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l---~TVVVGd~-~~~aL~r 183 (230)
..|+.+|+.+-.+|.++... +...+...|++-++-.. .+.-..+...+++-|+ .+++|||+ +|-...+
T Consensus 62 ~~L~~~G~~~~ivT~~~~~~-------~~~~l~~lgi~~~~~~~-k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~ 133 (195)
T 3n07_A 62 KALMNAGIEIAIITGRRSQI-------VENRMKALGISLIYQGQ-DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVME 133 (195)
T ss_dssp HHHHHTTCEEEEECSSCCHH-------HHHHHHHTTCCEEECSC-SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHT
T ss_pred HHHHHCCCEEEEEECcCHHH-------HHHHHHHcCCcEEeeCC-CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHH
Confidence 57899999999999888751 12223344665443222 3344444555555565 68999998 6666666
Q ss_pred hhh
Q 046085 184 IAD 186 (230)
Q Consensus 184 ~AD 186 (230)
.|+
T Consensus 134 ~ag 136 (195)
T 3n07_A 134 KVA 136 (195)
T ss_dssp TSS
T ss_pred HCC
Confidence 666
No 329
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=72.81 E-value=2.2 Score=35.87 Aligned_cols=69 Identities=10% Similarity=0.025 Sum_probs=45.3
Q ss_pred chhhhhhhhcEEEEEcc-ccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVRTMS-DKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~-dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
++...|+.+|+.|.... -.+...|. ...+..+. +.+.+.|++.+.+.+...+++.+++.|++.-++|..
T Consensus 162 ~~~~~l~~~G~~v~~~~~~~~~~~d~--~~~~~~l~-~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 231 (392)
T 3lkb_A 162 DARKAARELGLQIVDVQEVGSGNLDN--TALLKRFE-QAGVEYVVHQNVAGPVANILKDAKRLGLKMRHLGAH 231 (392)
T ss_dssp HHHHHHHHHTCEEEEEEECCTTCCCC--HHHHHHHH-HTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEECG
T ss_pred HHHHHHHHcCCeEEEEEeeCCCCcCH--HHHHHHHH-hcCCCEEEEecCcchHHHHHHHHHHcCCCceEEEec
Confidence 34556677776654211 11222221 11222333 468999999999999999999999999998888764
No 330
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=72.57 E-value=5.3 Score=36.24 Aligned_cols=68 Identities=7% Similarity=-0.002 Sum_probs=47.1
Q ss_pred hhhhhhhcEEEE---EccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 107 VVKLKRVWFWVR---TMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 107 a~eLrRAGv~Vr---tV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
..+|++.|+-|- +++..+...| +...+..++.+.+.+.|++.++..++..+++.|++.|++.+.||..
T Consensus 207 ~~~~~~~gi~v~~~~~~~~~~~~~~--~~~~l~~i~~~s~a~vIi~~~~~~~~~~~~~~~~~~g~~~~~i~s~ 277 (555)
T 2e4u_A 207 EQEARLRNICIATAEKVGRSNIRKS--YDSVIRELLQKPNARVVVLFMRSDDSRELIAAANRVNASFTWVASD 277 (555)
T ss_dssp HHHHHTTTCEEEEEEEECTTCCHHH--HHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEECT
T ss_pred HHHHHHCCccEEEEEEeCCCCChHH--HHHHHHHHhccCCCCEEEEEcCHHHHHHHHHHHHHhcCCeEEEEec
Confidence 456778898664 3443234445 3344444443358999999999999999999999999877777543
No 331
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=72.36 E-value=5.2 Score=34.24 Aligned_cols=73 Identities=12% Similarity=0.032 Sum_probs=38.4
Q ss_pred hhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc-chHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 110 LKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS-DFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 110 LrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS-DF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
.+|..|.|++.+.+-++... ..++...+...++++-+..+... +-..+++.+.+ +..+||+..+ ||++..+++
T Consensus 8 m~~~~vi~Np~sG~~~~~~~--~~~i~~~l~~~~~~~~~~~t~~~~~a~~~~~~~~~-~~d~vv~~GG-DGTl~~v~~ 81 (304)
T 3s40_A 8 FEKVLLIVNPKAGQGDLHTN--LTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFAS-KVDLIIVFGG-DGTVFECTN 81 (304)
T ss_dssp CSSEEEEECTTCSSSCHHHH--HHHHHHHHHHHCSEEEEEECCSTTHHHHHHHHHTT-TCSEEEEEEC-HHHHHHHHH
T ss_pred CCEEEEEECcccCCCchHHH--HHHHHHHHHHcCCeEEEEEccCcchHHHHHHHhhc-CCCEEEEEcc-chHHHHHHH
Confidence 34566666666665554332 34555556555666655555443 33444444432 5555555444 455666555
No 332
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=71.96 E-value=2.9 Score=34.81 Aligned_cols=68 Identities=15% Similarity=0.112 Sum_probs=44.7
Q ss_pred hhhhhhhhcEEEEE-ccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeE--EEecCC
Q 046085 106 LVVKLKRVWFWVRT-MSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKT--GVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~Vrt-V~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~T--VVVGd~ 176 (230)
+...|+++|..|-. ..-.+...|.. ..+..+. +.+.+.|++.++..+...+++.+++.|++. .++|..
T Consensus 160 ~~~~~~~~G~~v~~~~~~~~~~~d~~--~~l~~i~-~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~g~~ 230 (375)
T 3i09_A 160 TADVVKANGGKVLGEVRHPLSASDFS--SFLLQAQ-SSKAQILGLANAGGDTVNAIKAAKEFGITKTMKLAALL 230 (375)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCSCCH--HHHHHHH-HTCCSEEEEECCHHHHHHHHHHHHHTTGGGTCEEEESS
T ss_pred HHHHHHHcCCEEeeeeeCCCCCccHH--HHHHHHH-hCCCCEEEEecCchhHHHHHHHHHHcCCCcCceEEecc
Confidence 44566777776532 11112223321 2333334 468999999998889999999999999987 577765
No 333
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=71.78 E-value=3.7 Score=34.64 Aligned_cols=68 Identities=9% Similarity=-0.097 Sum_probs=45.3
Q ss_pred hhhhhhhhcEEEEE-ccccchHHHHHHHHHHHH--HHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 106 LVVKLKRVWFWVRT-MSDKLQAADVLLRNYMVD--MMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~Vrt-V~dKpqAAD~AL~~~m~~--~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
+...|+++|+.|-. ..-.+...|.. ..+.. +. +.+.+.|++.++..+...+++.+++.|++.-++|..
T Consensus 162 ~~~~l~~~G~~v~~~~~~~~~~~d~~--~~~~~~~l~-~~~~dav~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 232 (391)
T 3eaf_A 162 IKKAAPSLGLQVVGDYDLPLRATEAD--AERIAREML-AADPDYVWCGNTISSCSLLGRAMAKVGLDAFLLTNV 232 (391)
T ss_dssp HHHHTGGGTEEEEEEEECCTTCCHHH--HHHHHHHHH-TTCCSEEEECSCHHHHHHHHHHHHHHTCCCEEEECG
T ss_pred HHHHHHHcCCceeeeeccCCCCcCHH--HHHHHHHHH-HcCCCEEEEecCcHHHHHHHHHHHHCCCCceEEEec
Confidence 44566777876542 11122333322 22333 34 478999999888899999999999999988777754
No 334
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=71.63 E-value=6.4 Score=34.46 Aligned_cols=49 Identities=22% Similarity=0.299 Sum_probs=39.0
Q ss_pred HHhhcCcceEEEEcCCc-----chHHHHHHHHHcCCeEEEecCCCC--------chhhhhhh
Q 046085 138 MMDKRRFGCLVFVSDDS-----DFVEVLQEATLRCLKTGVAGYMND--------GTLKRIAD 186 (230)
Q Consensus 138 ~m~~r~vdclvLVSDDS-----DF~~lLr~ARer~l~TVVVGd~~~--------~aL~r~AD 186 (230)
||.+.....|+|+||-. |=..+.+.|++.|++..+||-+.+ ..|+.+|+
T Consensus 4 ~~~~~~~k~iillTDG~~~~g~~p~~aa~~a~~~gi~v~tIGig~~~~~~~~~~~~L~~IA~ 65 (242)
T 3rag_A 4 MTREATIRQILVITDGCSNIGPDPVEAARRAHRHGIVVNVIGIVGRGDAGEQGYQEAHSIAD 65 (242)
T ss_dssp HHHHCCEEEEEEEESSCCCSSSCHHHHHHHHHHTTCEEEEEEECCSSSCTTCCCHHHHHHHH
T ss_pred cccCCCccEEEEEccCCCCCCCCHHHHHHHHHHCCCEEEEEEecCCccccchhHHHHHHHHH
Confidence 47667788999999975 567889999999999888777421 57888888
No 335
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=71.62 E-value=15 Score=29.55 Aligned_cols=64 Identities=13% Similarity=0.050 Sum_probs=43.3
Q ss_pred hhhhhhhhcEEEEEcc-ccchHHHHHHHHHHHHHHhhcCcceEEEEcCC----cchHHHHHHHHHcCC---eEEEecCC
Q 046085 106 LVVKLKRVWFWVRTMS-DKLQAADVLLRNYMVDMMDKRRFGCLVFVSDD----SDFVEVLQEATLRCL---KTGVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~VrtV~-dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDD----SDF~~lLr~ARer~l---~TVVVGd~ 176 (230)
++..|+.+||.|..+. +-|.. .+.+.+...+.+.|+|-+-. ..+..+++..|++|+ -.|+||..
T Consensus 108 va~~l~~~G~~v~~LG~~vp~~-------~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 108 VAMMLESGGFTVYNLGVDIEPG-------KFVEAVKKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp HHHHHHHTTCEEEECCSSBCHH-------HHHHHHHHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred HHHHHHHCCCEEEECCCCCCHH-------HHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 5678999999999543 33332 23333445688888876643 357788889999886 46777776
No 336
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=71.50 E-value=3.3 Score=33.31 Aligned_cols=73 Identities=14% Similarity=0.076 Sum_probs=48.4
Q ss_pred cCCchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcch------------------HHHHHHH
Q 046085 102 VGYSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDF------------------VEVLQEA 163 (230)
Q Consensus 102 vgygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF------------------~~lLr~A 163 (230)
+|.-|+..|.+.|+.|..+...+ +|+.=...+.+.+...++|.++-...-..+ ..+++.|
T Consensus 17 iG~~l~~~L~~~g~~V~~~~r~~--~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 94 (287)
T 3sc6_A 17 LGKQLQEELNPEEYDIYPFDKKL--LDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVAS 94 (287)
T ss_dssp HHHHHHHHSCTTTEEEEEECTTT--SCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecccc--cCCCCHHHHHHHHHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 35778999999999999765422 232222333444543489999877654432 3488999
Q ss_pred HHcCCeEEEecCC
Q 046085 164 TLRCLKTGVAGYM 176 (230)
Q Consensus 164 Rer~l~TVVVGd~ 176 (230)
++.|++.|.++..
T Consensus 95 ~~~~~~~v~~SS~ 107 (287)
T 3sc6_A 95 QLVGAKLVYISTD 107 (287)
T ss_dssp HHHTCEEEEEEEG
T ss_pred HHcCCeEEEEchh
Confidence 9999987777653
No 337
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=70.93 E-value=1.7 Score=36.17 Aligned_cols=36 Identities=6% Similarity=0.059 Sum_probs=31.8
Q ss_pred hcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 141 KRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 141 ~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
..+.+.|++.+++.+...+++.+++.|++.-+||..
T Consensus 194 ~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~~ 229 (364)
T 3lop_A 194 AADVQAIFLGATAEPAAQFVRQYRARGGEAQLLGLS 229 (364)
T ss_dssp HSCCSEEEEESCHHHHHHHHHHHHHTTCCCEEEECT
T ss_pred hCCCCEEEEecCcHHHHHHHHHHHHcCCCCeEEEec
Confidence 468999999999999999999999999988788754
No 338
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=70.78 E-value=6.3 Score=31.61 Aligned_cols=66 Identities=9% Similarity=-0.083 Sum_probs=44.2
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEE
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGV 172 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVV 172 (230)
+...|+.+|+.+-.+..-++.. ..-.+.+.+.....|+..|++.+....|..+...|++.|++..+
T Consensus 68 ~~~~l~~~gl~i~~~~~~~~~~-~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 68 IKELAASKGIKIVGTGVYVAEK-SSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIKISV 133 (262)
T ss_dssp HHHHHHHTTCEEEEEEEECCSS-TTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHcCCeEEEEeccCCcc-HHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCEEEE
Confidence 3455677787776554333222 22344555666678899999988888899999999999986443
No 339
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=70.52 E-value=5.1 Score=35.47 Aligned_cols=42 Identities=19% Similarity=0.103 Sum_probs=34.8
Q ss_pred ceEEEEcC---CcchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 145 GCLVFVSD---DSDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSD---DSDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
|.++.+|- ..+-..+++.|+++|++|+.|-+..+..|.+.||
T Consensus 109 dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad 153 (375)
T 2zj3_A 109 DVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETD 153 (375)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHSS
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCChHHHhCC
Confidence 56777775 3456778899999999999999876679999999
No 340
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=73.14 E-value=0.9 Score=37.63 Aligned_cols=85 Identities=14% Similarity=0.110 Sum_probs=54.7
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC-CCchhhh
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM-NDGTLKR 183 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~-~~~aL~r 183 (230)
.+-..|+..|+.+-.++.++... +..++...|++.++-..-..+|..+++.....+-.++.|||+ +|-.-.+
T Consensus 143 ~~l~~L~~~g~~~~i~T~~~~~~-------~~~~~~~~gl~~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~ 215 (263)
T 2yj3_A 143 DYLEKLKNEGLKIIILSGDKEDK-------VKELSKELNIQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215 (263)
Confidence 34567999999999999887742 111122234432221111457888888888888889999999 6666667
Q ss_pred hhh-ccccccchHH
Q 046085 184 IAD-RLKWAYNSEV 196 (230)
Q Consensus 184 ~AD-~leW~~~~e~ 196 (230)
.|+ .+.|-+..+.
T Consensus 216 ~Agv~va~g~~~~~ 229 (263)
T 2yj3_A 216 LADVSVAMGNGVDI 229 (263)
Confidence 777 5566654433
No 341
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=70.22 E-value=21 Score=26.84 Aligned_cols=75 Identities=21% Similarity=0.162 Sum_probs=47.6
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcc-eEE--EEc-CCc-----------chHHHHHHHHHcCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFG-CLV--FVS-DDS-----------DFVEVLQEATLRCL 168 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vd-clv--LVS-DDS-----------DF~~lLr~ARer~l 168 (230)
-.+-..|++. +.+-.+|..+.. ....+ +...|++ .+. +++ ++. .|..+++......-
T Consensus 75 ~~~l~~l~~~-~~~~i~s~~~~~----~~~~~---l~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l~~l~~~~~ 146 (206)
T 1rku_A 75 VEFVDWLRER-FQVVILSDTFYE----FSQPL---MRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYY 146 (206)
T ss_dssp HHHHHHHHTT-SEEEEEEEEEHH----HHHHH---HHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhc-CcEEEEECChHH----HHHHH---HHHcCCcceecceeEEcCCceEEeeecCCCchHHHHHHHHHhcCC
Confidence 3455678888 888888888764 22222 3333443 232 333 343 37777877777777
Q ss_pred eEEEecCC-CCchhhhhhh
Q 046085 169 KTGVAGYM-NDGTLKRIAD 186 (230)
Q Consensus 169 ~TVVVGd~-~~~aL~r~AD 186 (230)
.+++|||+ +|-...+.|.
T Consensus 147 ~~~~iGD~~~Di~~a~~aG 165 (206)
T 1rku_A 147 RVIAAGDSYNDTTMLSEAH 165 (206)
T ss_dssp EEEEEECSSTTHHHHHHSS
T ss_pred EEEEEeCChhhHHHHHhcC
Confidence 89999999 6556667777
No 342
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=70.21 E-value=6.3 Score=31.20 Aligned_cols=70 Identities=17% Similarity=0.091 Sum_probs=44.8
Q ss_pred hhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCC---eEEEecCC-CCchhhh
Q 046085 108 VKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCL---KTGVAGYM-NDGTLKR 183 (230)
Q Consensus 108 ~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l---~TVVVGd~-~~~aL~r 183 (230)
..|++.|+.+-.+|.+ ..+.. +.+.+ ..+++ +.....+.-..+...+.+.|+ .++.|||+ +|-...+
T Consensus 46 ~~Lk~~Gi~~~I~Tg~-~~~~~-----~l~~l-~lgi~--~~~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~ 116 (168)
T 3ewi_A 46 SLLKKSGIEVRLISER-ACSKQ-----TLSAL-KLDCK--TEVSVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLK 116 (168)
T ss_dssp HHHHHTTCEEEEECSS-CCCHH-----HHHTT-CCCCC--EECSCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHH
T ss_pred HHHHHCCCEEEEEeCc-HHHHH-----HHHHh-CCCcE--EEECCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHH
Confidence 6899999999999988 33222 21211 35777 334444455555555566665 68999999 7666666
Q ss_pred hhh
Q 046085 184 IAD 186 (230)
Q Consensus 184 ~AD 186 (230)
.|.
T Consensus 117 ~ag 119 (168)
T 3ewi_A 117 RVG 119 (168)
T ss_dssp HSS
T ss_pred HCC
Confidence 666
No 343
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=70.14 E-value=14 Score=31.12 Aligned_cols=66 Identities=12% Similarity=0.042 Sum_probs=41.0
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHH-HHHHHHH-cCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVE-VLQEATL-RCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~-lLr~ARe-r~l~TVVVGd~ 176 (230)
|+...++..|+.+..+....+ +|. ...+..++ .+++|.|+++|.. +.+ +...|.+ .++.+|+|+..
T Consensus 28 Gi~~~~~~~g~~~~~~~~~~~-~~~--~~~l~~l~-~~~~dgIi~~~~~--~~~~~~~~a~~~p~~p~v~id~~ 95 (318)
T 2fqx_A 28 GISRFAQENNAKCKYVTASTD-AEY--VPSLSAFA-DENMGLVVACGSF--LVEAVIETSARFPKQKFLVIDAV 95 (318)
T ss_dssp HHHHHHHHTTCEEEEEECCSG-GGH--HHHHHHHH-HTTCSEEEEESTT--THHHHHHHHHHCTTSCEEEESSC
T ss_pred HHHHHHHHhCCeEEEEeCCCH-HHH--HHHHHHHH-HcCCCEEEECChh--HHHHHHHHHHHCCCCEEEEEcCc
Confidence 566677888988775544332 332 22333334 6899999999743 223 4444544 38999999864
No 344
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=70.03 E-value=1.7 Score=35.81 Aligned_cols=36 Identities=14% Similarity=0.024 Sum_probs=31.1
Q ss_pred hcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 141 KRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 141 ~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
+.+.+.|++.+|..+...+++.+++.|++.-+||..
T Consensus 192 ~~~~d~i~~~~~~~~a~~~~~~~~~~g~~~p~~~~~ 227 (358)
T 3hut_A 192 DEAPQAIYLAMAYEDAAPFLRALRARGSALPVYGSS 227 (358)
T ss_dssp HHCCSEEEEESCHHHHHHHHHHHHHTTCCCCEEECG
T ss_pred hcCCCEEEEccCchHHHHHHHHHHHcCCCCcEEecC
Confidence 468899888888889999999999999998888753
No 345
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=69.75 E-value=1.1 Score=37.81 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=44.3
Q ss_pred CchhhhhhhhcEEEEEccc---cchHHHHHHHHHHHHHHhh-cCcceEEEEcCCc--chHHHHHHH---HHcCCeEEEec
Q 046085 104 YSLVVKLKRVWFWVRTMSD---KLQAADVLLRNYMVDMMDK-RRFGCLVFVSDDS--DFVEVLQEA---TLRCLKTGVAG 174 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~d---KpqAAD~AL~~~m~~~m~~-r~vdclvLVSDDS--DF~~lLr~A---Rer~l~TVVVG 174 (230)
-.|+..|+.+|+.|..++- .|...+. ..+.+.+.. ..+|++++.|... .|..++... .-.+++.++||
T Consensus 170 ~~L~~~L~~~G~~v~~~~~Y~~~~~~~~~---~~~~~~l~~~~~~d~v~ftS~~~v~~f~~~~~~~~~~~l~~~~i~aIG 246 (286)
T 1jr2_A 170 EILPKALKDKGIAMESITVYQTVAHPGIQ---GNLNSYYSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIG 246 (286)
T ss_dssp CCHHHHHHTTTCCEEEEECEEEEECTTHH---HHHHHHHHHHCSCSEEEESSHHHHHHHHHHHHHHHGGGGGGSEEEESS
T ss_pred HHHHHHHHHCCCeeEEEEEEEEeeCCCcH---HHHHHHHHhCCCCCEEEEEChHHHHHHHHHHhhhccccccCCEEEEEC
Confidence 4589999999987764331 2221111 112222322 5788888877765 344444431 13578899999
Q ss_pred CCCCchhhh
Q 046085 175 YMNDGTLKR 183 (230)
Q Consensus 175 d~~~~aL~r 183 (230)
..+-.+|..
T Consensus 247 ~~Ta~~l~~ 255 (286)
T 1jr2_A 247 PTTARALAA 255 (286)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 886455554
No 346
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=69.71 E-value=2.1 Score=26.53 Aligned_cols=21 Identities=14% Similarity=-0.024 Sum_probs=19.3
Q ss_pred cccccCCCcccCchHHHHHHHH
Q 046085 34 LVIVEGDLRLYNNDKLVNHFKQ 55 (230)
Q Consensus 34 ~C~VCGdrkf~t~~kL~kHFkq 55 (230)
.|++|. -..++..+|+-||..
T Consensus 5 ~CpvCk-~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 5 CCPKCQ-YQAPDMDTLQIHVME 25 (28)
T ss_dssp ECTTSS-CEESSHHHHHHHHHH
T ss_pred cCcccc-ccCcChHHHHHHHHH
Confidence 899999 999999999999963
No 347
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=69.44 E-value=5.5 Score=34.41 Aligned_cols=44 Identities=20% Similarity=0.056 Sum_probs=36.7
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 143 RFGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 143 ~vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
.=|+++.+|-. .+-.++++.|+++|.+||.|-+.....|.+.||
T Consensus 140 ~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD 186 (306)
T 1nri_A 140 KNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIAD 186 (306)
T ss_dssp TTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSS
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCC
Confidence 34788888753 456788999999999999999986678999999
No 348
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=69.34 E-value=5 Score=35.01 Aligned_cols=72 Identities=11% Similarity=0.072 Sum_probs=47.6
Q ss_pred hhhhhhh-hcEEEEEccccchHHHHHHHHHHHHHHhhcCc-ceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCch
Q 046085 106 LVVKLKR-VWFWVRTMSDKLQAADVLLRNYMVDMMDKRRF-GCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGT 180 (230)
Q Consensus 106 La~eLrR-AGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~v-dclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~a 180 (230)
++.-|.+ .|+.|..+.+ .+. .+....+ ..= +.++.+|-. .+-..+++.|+++|++|+.|-+..+..
T Consensus 70 ~~~~l~~~~g~~v~~~~~----~~~---~~~~~~~--~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~ 140 (342)
T 1j5x_A 70 ISYYFERVLKIRTKAIPA----GEV---AFQKIPD--LEERGLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESR 140 (342)
T ss_dssp HHHHHHHHHCCEEEEEEH----HHH---HTTCSCC--CCSSEEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSH
T ss_pred HHHHHHHhhCCeEEEECc----hHH---HhcCccc--CCCCeEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCH
Confidence 3445667 8998886643 111 0000001 122 567777743 466778899999999999998876679
Q ss_pred hhhhhh
Q 046085 181 LKRIAD 186 (230)
Q Consensus 181 L~r~AD 186 (230)
|.+.||
T Consensus 141 La~~ad 146 (342)
T 1j5x_A 141 LAKESD 146 (342)
T ss_dssp HHHHSS
T ss_pred HHHhcC
Confidence 999999
No 349
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=69.20 E-value=5.9 Score=34.61 Aligned_cols=42 Identities=12% Similarity=0.140 Sum_probs=34.2
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 145 GCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
+.++.+|-. .|-..+++.|+++|++|+.|-+..+..|.+.||
T Consensus 104 dlvI~iS~SG~t~e~~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad 148 (355)
T 2a3n_A 104 SVVITLSKSGDTKESVAIAEWCKAQGIRVVAITKNADSPLAQAAT 148 (355)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTCS
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCChhhHhCC
Confidence 566666643 456778899999999999998876679999999
No 350
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=68.38 E-value=3.9 Score=33.64 Aligned_cols=69 Identities=13% Similarity=0.075 Sum_probs=43.5
Q ss_pred chhhhhhhhcEEEEEc-cccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVRTM-SDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV-~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
|+...|+++|+.|-.. .-.+...|. ...+..+. +.+.+.|++.+++.+...+++.+++.|++.-++|..
T Consensus 178 ~~~~~l~~~g~~v~~~~~~~~~~~d~--~~~~~~~~-~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 247 (386)
T 3sg0_A 178 VLAAAAPKLGFELTTHEVYARSDASV--TGQVLKII-ATKPDAVFIASAGTPAVLPQKALRERGFKGAIYQTH 247 (386)
T ss_dssp HHHHHHHHHTCEECCCEEECTTCSCC--HHHHHHHH-HTCCSEEEEECCSGGGHHHHHHHHHTTCCSEEECCG
T ss_pred HHHHHHHHcCCEEEEEEeeCCCCCcH--HHHHHHHH-hcCCCEEEEecCcchHHHHHHHHHHcCCCCcEEecc
Confidence 4455667777655311 111112221 11222334 468999999999899999999999999987666643
No 351
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=67.82 E-value=25 Score=24.76 Aligned_cols=86 Identities=6% Similarity=-0.086 Sum_probs=52.4
Q ss_pred cCCchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHH----cCCeEEEecC
Q 046085 102 VGYSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATL----RCLKTGVAGY 175 (230)
Q Consensus 102 vgygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARe----r~l~TVVVGd 175 (230)
..-.|...|.+.|+.|.++++..+|- +.+.....+.+++=.+ +.+-.++++..++ .++..|++++
T Consensus 20 ~~~~l~~~L~~~g~~v~~~~~~~~a~---------~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~ls~ 90 (147)
T 2zay_A 20 ALAASISALSQEGFDIIQCGNAIEAV---------PVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIPVIALSG 90 (147)
T ss_dssp GGHHHHHHHHHHTEEEEEESSHHHHH---------HHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSCEEEEES
T ss_pred HHHHHHHHHHHcCCeEEEeCCHHHHH---------HHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCCEEEEeC
Confidence 34567888999999999777655442 2233346777666433 3345577888886 5678888887
Q ss_pred CCCchhhh-----hhh-ccccccchHH
Q 046085 176 MNDGTLKR-----IAD-RLKWAYNSEV 196 (230)
Q Consensus 176 ~~~~aL~r-----~AD-~leW~~~~e~ 196 (230)
..+..... -|+ +|.-.+++++
T Consensus 91 ~~~~~~~~~~~~~g~~~~l~kp~~~~~ 117 (147)
T 2zay_A 91 RATAKEEAQLLDMGFIDFIAKPVNAIR 117 (147)
T ss_dssp SCCHHHHHHHHHHTCSEEEESSCCHHH
T ss_pred CCCHHHHHHHHhCCCCEEEeCCCCHHH
Confidence 64332222 222 6655555544
No 352
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=67.82 E-value=2.4 Score=34.92 Aligned_cols=34 Identities=15% Similarity=0.161 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHHHHHhcCccCCCC--CcccccccC
Q 046085 5 LQESKEKKIKELFNQLEIKGVIRPAE--PYVLVIVEG 39 (230)
Q Consensus 5 ~~~r~~r~er~~l~~le~~g~i~p~e--py~~C~VCG 39 (230)
-|+..+..-+++|+.|+.....+..+ -| .|++||
T Consensus 127 ~E~ehe~~~~~~l~~l~~~~~~~~~~~~~~-~C~~CG 162 (191)
T 1lko_A 127 AEEFHEKRFLDFARNIKEGRVFLREQATKW-RCRNCG 162 (191)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSEEEEEEEE-EETTTC
T ss_pred HHHHHHHHHHHHHHhhhcccccccCCCceE-EECCCC
Confidence 45566666778888888866665333 45 999999
No 353
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=67.54 E-value=3.5 Score=33.93 Aligned_cols=67 Identities=10% Similarity=0.024 Sum_probs=41.1
Q ss_pred hhhhhhhhcEEEEEc-cccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCe---EEEecC
Q 046085 106 LVVKLKRVWFWVRTM-SDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLK---TGVAGY 175 (230)
Q Consensus 106 La~eLrRAGv~VrtV-~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~---TVVVGd 175 (230)
+...|+++|+.|-.. .-.+...|.. ..+..+. +.+.+.|++.+.+.+...+++.+++.|++ ..++|.
T Consensus 159 ~~~~l~~~g~~v~~~~~~~~~~~d~~--~~~~~l~-~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~v~~~~~ 229 (368)
T 4eyg_A 159 FKERFTAGGGEIVEEIKVPLANPDFA--PFLQRMK-DAKPDAMFVFVPAGQGGNFMKQFAERGLDKSGIKVIGP 229 (368)
T ss_dssp HHHHHHHTTCEEEEEEEECSSSCCCH--HHHHHHH-HHCCSEEEEECCTTCHHHHHHHHHHTTGGGTTCEEEEE
T ss_pred HHHHHHHcCCEEEEEEeCCCCCCcHH--HHHHHHH-hcCCCEEEEeccchHHHHHHHHHHHcCCCcCCceEEec
Confidence 445566677654321 1111222221 2233334 46899999988888999999999999998 445543
No 354
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=67.53 E-value=13 Score=28.62 Aligned_cols=36 Identities=11% Similarity=-0.043 Sum_probs=22.3
Q ss_pred HHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 138 MMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 138 ~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
++ ..|+..+++.+.. .=..+.+.|++.|++ +||..+
T Consensus 89 ~~-~~g~~~i~~~~~~-~~~~l~~~a~~~Gi~--~igpnc 124 (138)
T 1y81_A 89 AV-EAGFKKLWFQPGA-ESEEIRRFLEKAGVE--YSFGRC 124 (138)
T ss_dssp HH-HTTCCEEEECTTS-CCHHHHHHHHHHTCE--EECSCC
T ss_pred HH-HcCCCEEEEcCcc-HHHHHHHHHHHCCCE--EEcCCc
Confidence 44 3677776666543 235677777777777 556554
No 355
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=66.84 E-value=12 Score=30.05 Aligned_cols=66 Identities=8% Similarity=-0.144 Sum_probs=40.4
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEE
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGV 172 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVV 172 (230)
+...|+.+|+.+-.+..-.. ..+.-.+.+.+.+...|+..+++......|..++..|.+.|++..+
T Consensus 66 ~~~~l~~~gl~i~~~~~~~~-~~~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~gv~l~l 131 (257)
T 3lmz_A 66 FHDKCAAHKVTGYAVGPIYM-KSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFHYAI 131 (257)
T ss_dssp HHHHHHHTTCEEEEEEEEEE-CSHHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHcCCeEEEEecccc-CCHHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHcCCEEEE
Confidence 34556666666654432211 2334445555556567888888777667788888888888876443
No 356
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=66.56 E-value=3.1 Score=35.04 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=46.7
Q ss_pred CchhhhhhhhcEEEEEccc---cchHHHHHHHHHHHHHHhhcCcceEEEEcCCc--chHHHHHHH-----HHc-CCeEEE
Q 046085 104 YSLVVKLKRVWFWVRTMSD---KLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS--DFVEVLQEA-----TLR-CLKTGV 172 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~d---KpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS--DF~~lLr~A-----Rer-~l~TVV 172 (230)
-.|+..|+.+|+.|..++- .|...+ ...+.+.+....+|++++-|... .|..++... ... +++.++
T Consensus 169 ~~L~~~L~~~G~~v~~~~~Y~~~~~~~~---~~~~~~~l~~~~~d~v~FtS~~~v~~~~~~~~~~~~~~~~l~~~~~i~a 245 (286)
T 3d8t_A 169 PLLENALAERGYRVLPLMPYRHLPDPEG---ILRLEEAVLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALA 245 (286)
T ss_dssp HHHHHHHHHTTCEEEEECSEEEEECHHH---HHHHHHHHHTTCCSEEEESSHHHHHHHHHHCSCHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHHCCCEEEEEEEEEEecCccc---HHHHHHHHHcCCCCEEEEECHHHHHHHHHHHHhccchhhHhhcCCEEEE
Confidence 3588999999999885543 233221 22333445556789887777654 244433211 124 788999
Q ss_pred ecCCCCchhhh
Q 046085 173 AGYMNDGTLKR 183 (230)
Q Consensus 173 VGd~~~~aL~r 183 (230)
||..+-.++..
T Consensus 246 IG~~TA~al~~ 256 (286)
T 3d8t_A 246 VGRVTADALRE 256 (286)
T ss_dssp ESHHHHHHHHH
T ss_pred ECHHHHHHHHH
Confidence 99986555554
No 357
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=66.32 E-value=8.2 Score=31.87 Aligned_cols=66 Identities=6% Similarity=-0.095 Sum_probs=42.9
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++...|+.+.......+. .-...+.+.|..+++|.|+ ++.+.+. ..+.+.|+.+|+++...
T Consensus 80 ~gi~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~l~~~~vdgiI-~~~~~~~----~~l~~~~iPvV~~~~~~ 145 (330)
T 3ctp_A 80 SVIEEYAKNKGYTLFLCNTDDDK---EKEKTYLEVLQSHRVAGII-ASRSQCE----DEYANIDIPVVAFENHI 145 (330)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCH---HHHHHHHHHHHHTTCSEEE-EETCCCS----GGGTTCCSCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCh---HHHHHHHHHHHhCCCCEEE-ECCCCCH----HHHHhcCCCEEEEeccC
Confidence 46777888899988755432222 2233344444468999999 8765443 23457899999998753
No 358
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=66.21 E-value=13 Score=29.18 Aligned_cols=72 Identities=11% Similarity=-0.051 Sum_probs=37.8
Q ss_pred hhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCC---eEEEecCC-CCchhh
Q 046085 107 VVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCL---KTGVAGYM-NDGTLK 182 (230)
Q Consensus 107 a~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l---~TVVVGd~-~~~aL~ 182 (230)
-..|+.+|+.+-.+|..|... + . ..+...|++-++-.. -+.-..+...++.-|+ .+++|||+ +|-...
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~---~-~---~~l~~lgl~~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~ 126 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAV---V-D---HRMEQLGITHYYKGQ-VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLI 126 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHH---H-H---HHHHHHTCCEEECSC-SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred HHHHHHCCCeEEEEeCcChHH---H-H---HHHHHcCCccceeCC-CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 356788898888888877641 1 1 122223544322111 2222333333344454 47888877 555555
Q ss_pred hhhh
Q 046085 183 RIAD 186 (230)
Q Consensus 183 r~AD 186 (230)
+.|+
T Consensus 127 ~~ag 130 (191)
T 3n1u_A 127 QQVG 130 (191)
T ss_dssp HHSS
T ss_pred HHCC
Confidence 5555
No 359
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=65.87 E-value=14 Score=30.35 Aligned_cols=79 Identities=14% Similarity=0.059 Sum_probs=48.5
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC-CCchhhh
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM-NDGTLKR 183 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~-~~~aL~r 183 (230)
.+-..|+.+|+.+-.++..|... ...+ +...|++-++-.--......+++..... -.+++|||+ +|-...+
T Consensus 170 ~~l~~L~~~g~~~~i~T~~~~~~----~~~~---l~~~gl~~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~ 241 (287)
T 3a1c_A 170 PAVQELKRMGIKVGMITGDNWRS----AEAI---SRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 241 (287)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHH----HHHH---HHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCCHHH----HHHH---HHHhCCceeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHH
Confidence 34567889999999999998751 1222 2223554332111123566666666656 679999999 6666667
Q ss_pred hhh-ccccc
Q 046085 184 IAD-RLKWA 191 (230)
Q Consensus 184 ~AD-~leW~ 191 (230)
.|+ .+-|.
T Consensus 242 ~ag~~v~~~ 250 (287)
T 3a1c_A 242 QADLGIAVG 250 (287)
T ss_dssp HSSEEEEEC
T ss_pred HCCeeEEeC
Confidence 777 34443
No 360
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=65.75 E-value=0.96 Score=36.22 Aligned_cols=70 Identities=10% Similarity=0.024 Sum_probs=44.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.|+..++++.|+.+..+.......+ ...+.+.+..+++|.|++++.+.+-..++ .+.+.|+.+|++|...
T Consensus 32 ~gi~~~a~~~g~~~~~~~~~~~~~~---~~~~~~~l~~~~vdgiIi~~~~~~~~~~~-~~~~~~iPvV~~~~~~ 101 (289)
T 3g85_A 32 RGLQSKLAKQNYNYNVVICPYKTDC---LHLEKGISKENSFDAAIIANISNYDLEYL-NKASLTLPIILFNRLS 101 (289)
T ss_dssp HHHHHHHHHTTTCSEEEEEEECTTC---GGGCGGGSTTTCCSEEEESSCCHHHHHHH-HHCCCSSCEEEESCCC
T ss_pred HHHHHHHHHcCCeEEEEecCCCchh---HHHHHHHHhccCCCEEEEecCCcccHHHH-HhccCCCCEEEECCCC
Confidence 4667788888887664432211111 12333445578999999998765543444 4457899999998764
No 361
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=65.58 E-value=3.3 Score=33.85 Aligned_cols=43 Identities=21% Similarity=0.114 Sum_probs=33.9
Q ss_pred cceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCC-----------Cchhhhhhh
Q 046085 144 FGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMN-----------DGTLKRIAD 186 (230)
Q Consensus 144 vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~-----------~~aL~r~AD 186 (230)
=|+++++|-. .+-..+++.|+++|++||.|-+.. .+.|.+.||
T Consensus 109 ~Dv~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD 165 (243)
T 3cvj_A 109 KDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYAD 165 (243)
T ss_dssp TCEEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCS
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCC
Confidence 4788888753 567788899999999999997762 227999999
No 362
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=65.40 E-value=14 Score=29.18 Aligned_cols=64 Identities=8% Similarity=-0.076 Sum_probs=43.1
Q ss_pred hhhhhhhhcEEEEEcc-ccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc----chHHHHHHHHHcCC--eEEEecCC
Q 046085 106 LVVKLKRVWFWVRTMS-DKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS----DFVEVLQEATLRCL--KTGVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~VrtV~-dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS----DF~~lLr~ARer~l--~TVVVGd~ 176 (230)
++..|+.+||.|.-.. +.|.. .+.+.+-..+.+.++|-|... .+..+++..++.|. -.|+||..
T Consensus 38 va~~l~~~G~eVi~lG~~~p~e-------~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 38 VARALRDAGFEVVYTGLRQTPE-------QVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp HHHHHHHTTCEEECCCSBCCHH-------HHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred HHHHHHHCCCEEEECCCCCCHH-------HHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 4678999999999553 33432 233444457889888877654 46677778888875 45777765
No 363
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=65.36 E-value=3.6 Score=33.46 Aligned_cols=69 Identities=4% Similarity=-0.115 Sum_probs=42.6
Q ss_pred chhhhhhhhcEEEEE-ccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 105 SLVVKLKRVWFWVRT-MSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 105 gLa~eLrRAGv~Vrt-V~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
|+...|+.+|+.|-. ..-.+...|.. ..+..+. +.+.+.|++.+.+.+...+++.+++.|++.-+||..
T Consensus 154 ~~~~~l~~~g~~v~~~~~~~~~~~~~~--~~~~~l~-~~~~dav~~~~~~~~a~~~~~~~~~~g~~~p~i~~~ 223 (362)
T 3snr_A 154 DLKKQGEAMGLKIVGEERFARPDTSVA--GQALKLV-AANPDAILVGASGTAAALPQTTLRERGYNGLIYQTH 223 (362)
T ss_dssp HHHHHHHHTTCEEEEEEEECTTCSCCH--HHHHHHH-HHCCSEEEEECCHHHHHHHHHHHHHTTCCSEEEECG
T ss_pred HHHHHHHHcCCEEEEEeecCCCCCCHH--HHHHHHH-hcCCCEEEEecCcchHHHHHHHHHHcCCCccEEecc
Confidence 345566777765431 11111222211 1222233 468899999998999999999999999986556543
No 364
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=65.18 E-value=7.7 Score=34.12 Aligned_cols=42 Identities=24% Similarity=0.115 Sum_probs=34.5
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 145 GCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
|.++.+|-. .+-..+++.|+++|++|+.|-+..+..|.+.||
T Consensus 99 dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad 143 (367)
T 2poc_A 99 DTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTH 143 (367)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSHHHHHSS
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCC
Confidence 566667643 456778899999999999999876679999999
No 365
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=65.17 E-value=5.5 Score=33.78 Aligned_cols=65 Identities=9% Similarity=0.022 Sum_probs=44.0
Q ss_pred hhhhhhcEEEEEccc-cchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCe----EEEecC
Q 046085 108 VKLKRVWFWVRTMSD-KLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLK----TGVAGY 175 (230)
Q Consensus 108 ~eLrRAGv~VrtV~d-KpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~----TVVVGd 175 (230)
.+++..|+-|-...- .+...| ....+..+. +.+.+.|++.+...+...+++.|++.|+. +.++++
T Consensus 149 ~~~~~~g~~v~~~~~~~~~~~d--~~~~l~~ik-~~~~~vii~~~~~~~~~~~~~qa~~~g~~~~~~~~i~~~ 218 (384)
T 3saj_A 149 DTAAEKNWQVTAVNILTTTEEG--YRMLFQDLE-KKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILAN 218 (384)
T ss_dssp HHHHHHTCEEEEEEGGGCCHHH--HHHTTTTCC-SCSEEEEEEECCGGGHHHHHHHHHHTCCTTCEEEEEESS
T ss_pred HHhhhcCceEEEEEeccCCchh--HHHHHHHHh-ccCCcEEEEEcCHHHHHHHHHHHHHcCCCCCCcEEEEEC
Confidence 456677877664332 223334 333333333 46889999999999999999999999986 345665
No 366
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=65.06 E-value=6.5 Score=30.55 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=28.0
Q ss_pred CcceEEEEcCCc----chHHHHHHHHHcCCeEEEecCCC
Q 046085 143 RFGCLVFVSDDS----DFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 143 ~vdclvLVSDDS----DF~~lLr~ARer~l~TVVVGd~~ 177 (230)
+...|+|+||-. +...+++.++..|+...+||-++
T Consensus 111 ~~~~ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~ 149 (218)
T 3ibs_A 111 VGRAIIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGM 149 (218)
T ss_dssp CCEEEEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESC
T ss_pred CCcEEEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecC
Confidence 347899999853 48899999999999888877664
No 367
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=64.96 E-value=21 Score=26.19 Aligned_cols=76 Identities=18% Similarity=0.139 Sum_probs=46.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcc----eEEEEcC--------------CcchHHHHHHHHH
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFG----CLVFVSD--------------DSDFVEVLQEATL 165 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vd----clvLVSD--------------DSDF~~lLr~ARe 165 (230)
-.+-..|+..|+.+-.++.++... . ..+.+. .+++ ..+.+.+ -+.-..++..+.+
T Consensus 82 ~~~l~~l~~~g~~~~i~T~~~~~~---~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 154 (211)
T 1l7m_A 82 EETIKELKNRGYVVAVVSGGFDIA---V-NKIKEK---LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKI 154 (211)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEHHH---H-HHHHHH---HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEcCCcHHH---H-HHHHHH---cCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHH
Confidence 345567888999999898887641 1 222222 2333 2222222 1234566677777
Q ss_pred cCCe---EEEecCC-CCchhhhhhh
Q 046085 166 RCLK---TGVAGYM-NDGTLKRIAD 186 (230)
Q Consensus 166 r~l~---TVVVGd~-~~~aL~r~AD 186 (230)
-|+. +++|||+ +|-...+.|.
T Consensus 155 lgi~~~~~~~iGD~~~Di~~~~~ag 179 (211)
T 1l7m_A 155 EGINLEDTVAVGDGANDISMFKKAG 179 (211)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHCS
T ss_pred cCCCHHHEEEEecChhHHHHHHHCC
Confidence 7875 9999999 6666667777
No 368
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=64.94 E-value=8.3 Score=34.56 Aligned_cols=79 Identities=11% Similarity=-0.017 Sum_probs=50.4
Q ss_pred hhhhhhhhc-EEEEEccccchHHHHHHHHHHHHHHhhcCcceEEE--EcCCcc---hHHHHHHHHHcCCeEEE-ecCCCC
Q 046085 106 LVVKLKRVW-FWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVF--VSDDSD---FVEVLQEATLRCLKTGV-AGYMND 178 (230)
Q Consensus 106 La~eLrRAG-v~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvL--VSDDSD---F~~lLr~ARer~l~TVV-VGd~~~ 178 (230)
|..+|++-| =.|=.|.|.+.....-+...+.+.+.+.|+++.++ |..++. ...+++.+++.+...|| ||.++.
T Consensus 34 l~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 113 (407)
T 1vlj_A 34 IGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSV 113 (407)
T ss_dssp HHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHH
T ss_pred HHHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhH
Confidence 445566666 34556778665544346788888887778887654 222544 45566778888987777 888743
Q ss_pred chhhhh
Q 046085 179 GTLKRI 184 (230)
Q Consensus 179 ~aL~r~ 184 (230)
..+.+.
T Consensus 114 iD~AK~ 119 (407)
T 1vlj_A 114 VDSAKA 119 (407)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 369
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=64.85 E-value=4.5 Score=33.13 Aligned_cols=70 Identities=10% Similarity=0.097 Sum_probs=49.2
Q ss_pred cCCchhhhhhhhcEEEEEccccchH----------HHHHHHHHHHHHHhhcCcceEEEEcCCcch--------------H
Q 046085 102 VGYSLVVKLKRVWFWVRTMSDKLQA----------ADVLLRNYMVDMMDKRRFGCLVFVSDDSDF--------------V 157 (230)
Q Consensus 102 vgygLa~eLrRAGv~VrtV~dKpqA----------AD~AL~~~m~~~m~~r~vdclvLVSDDSDF--------------~ 157 (230)
+|.-|+..|.+.|+.|..+...|.. +|+. ...+.+.+. ++|.|+-......+ .
T Consensus 14 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~--~~d~Vih~a~~~~~~~~~~~~~~n~~~~~ 90 (311)
T 3m2p_A 14 LGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLN--DVDAVVHLAATRGSQGKISEFHDNEILTQ 90 (311)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTT--TCSEEEECCCCCCSSSCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhc--CCCEEEEccccCCCCChHHHHHHHHHHHH
Confidence 3567899999999999876655443 4555 556666663 89999987654432 5
Q ss_pred HHHHHHHHcCCeEEE-ec
Q 046085 158 EVLQEATLRCLKTGV-AG 174 (230)
Q Consensus 158 ~lLr~ARer~l~TVV-VG 174 (230)
.+++.|++.|++.+| ++
T Consensus 91 ~ll~a~~~~~~~r~v~~S 108 (311)
T 3m2p_A 91 NLYDACYENNISNIVYAS 108 (311)
T ss_dssp HHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEc
Confidence 788999999998444 44
No 370
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=64.78 E-value=34 Score=24.70 Aligned_cols=84 Identities=13% Similarity=0.004 Sum_probs=51.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHHc----CCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATLR----CLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARer----~l~TVVVGd~~ 177 (230)
..|...|.+.|+.|.++++..+| .+.+....+|.+++=.. +.+=.++++..|+. .+..+++....
T Consensus 21 ~~l~~~L~~~g~~v~~~~~~~~a---------l~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~~~ 91 (154)
T 3gt7_A 21 EHLKHILEETGYQTEHVRNGREA---------VRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTILS 91 (154)
T ss_dssp HHHHHHHHTTTCEEEEESSHHHH---------HHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEECCC
T ss_pred HHHHHHHHHCCCEEEEeCCHHHH---------HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEECCC
Confidence 46778889999999887765444 23344566787776543 34456778888874 57788887653
Q ss_pred Cchh-hh----hhh-ccccccchHH
Q 046085 178 DGTL-KR----IAD-RLKWAYNSEV 196 (230)
Q Consensus 178 ~~aL-~r----~AD-~leW~~~~e~ 196 (230)
+... .+ -|| +|.--+++++
T Consensus 92 ~~~~~~~~~~~g~~~~l~KP~~~~~ 116 (154)
T 3gt7_A 92 DPRDVVRSLECGADDFITKPCKDVV 116 (154)
T ss_dssp SHHHHHHHHHHCCSEEEESSCCHHH
T ss_pred ChHHHHHHHHCCCCEEEeCCCCHHH
Confidence 3222 22 122 6665555544
No 371
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=64.69 E-value=13 Score=28.89 Aligned_cols=73 Identities=11% Similarity=-0.096 Sum_probs=40.0
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcC---CeEEEecCC-CCchh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRC---LKTGVAGYM-NDGTL 181 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~---l~TVVVGd~-~~~aL 181 (230)
+-..|+.+|+.+-.+|.++... ...+ +...|++-++-.. .+--..+...++.-| -.+++|||+ +|-..
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~----~~~~---~~~lgl~~~f~~~-~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~ 125 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAI----VERR---AKSLGIEHLFQGR-EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPV 125 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHH----HHHH---HHHHTCSEEECSC-SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCEEEEEECcChHH----HHHH---HHHcCCHHHhcCc-CChHHHHHHHHHHcCCChhHEEEECCCHHHHHH
Confidence 5578899999998888888741 1112 2233554322211 111233333333344 357888888 65556
Q ss_pred hhhhh
Q 046085 182 KRIAD 186 (230)
Q Consensus 182 ~r~AD 186 (230)
.+.|+
T Consensus 126 ~~~ag 130 (189)
T 3mn1_A 126 IRRVG 130 (189)
T ss_dssp HHHSS
T ss_pred HHHCC
Confidence 66666
No 372
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=64.65 E-value=46 Score=25.56 Aligned_cols=88 Identities=13% Similarity=0.076 Sum_probs=49.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCcc-----hHHHHHHHHHcCC---eEEEec
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDSD-----FVEVLQEATLRCL---KTGVAG 174 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDSD-----F~~lLr~ARer~l---~TVVVG 174 (230)
-.+-..|+..|+.+-.++..+... ...+.+.+. ..-++. ++.|++.. =..+...+..-|+ .+++||
T Consensus 100 ~~~l~~l~~~g~~~~i~t~~~~~~----~~~~l~~~~l~~~f~~-~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iG 174 (241)
T 2hoq_A 100 RKVLIRLKELGYELGIITDGNPVK----QWEKILRLELDDFFEH-VIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVG 174 (241)
T ss_dssp HHHHHHHHHHTCEEEEEECSCHHH----HHHHHHHTTCGGGCSE-EEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHHHHCCCEEEEEECCCchh----HHHHHHHcCcHhhccE-EEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEEC
Confidence 345667889999988888877541 222222220 111343 33444422 1233444455565 589999
Q ss_pred CC--CCchhhhhhh----ccccccchHH
Q 046085 175 YM--NDGTLKRIAD----RLKWAYNSEV 196 (230)
Q Consensus 175 d~--~~~aL~r~AD----~leW~~~~e~ 196 (230)
|+ +|-...+.|. ++.|.+....
T Consensus 175 D~~~~Di~~a~~aG~~~~~v~~g~~~~~ 202 (241)
T 2hoq_A 175 DRLYSDIYGAKRVGMKTVWFRYGKHSER 202 (241)
T ss_dssp SCTTTTHHHHHHTTCEEEEECCSCCCHH
T ss_pred CCchHhHHHHHHCCCEEEEECCCCCCcc
Confidence 98 4555667777 6677765443
No 373
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=64.61 E-value=14 Score=35.38 Aligned_cols=72 Identities=15% Similarity=0.069 Sum_probs=50.5
Q ss_pred hhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC-CCchhhhhh
Q 046085 107 VVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM-NDGTLKRIA 185 (230)
Q Consensus 107 a~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~-~~~aL~r~A 185 (230)
-..|+++|+.|-.++..+...=. .++...|++.++.-....+=..+++..++. -.++.|||+ ||-.--+.|
T Consensus 466 i~~L~~~Gi~v~~~TGd~~~~a~-------~ia~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A 537 (645)
T 3j08_A 466 VQELKRMGIKVGMITGDNWRSAE-------AISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQA 537 (645)
T ss_dssp HHHHHHTTCEEEEECSSCHHHHH-------HHHHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHS
T ss_pred HHHHHHCCCEEEEEeCCCHHHHH-------HHHHHcCCCEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhC
Confidence 35688899999888888764222 223344777666666667788888888777 678899999 765555666
Q ss_pred h
Q 046085 186 D 186 (230)
Q Consensus 186 D 186 (230)
|
T Consensus 538 ~ 538 (645)
T 3j08_A 538 D 538 (645)
T ss_dssp S
T ss_pred C
Confidence 6
No 374
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=64.41 E-value=9.2 Score=37.58 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=48.6
Q ss_pred hhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC-CCchhhhhh
Q 046085 107 VVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM-NDGTLKRIA 185 (230)
Q Consensus 107 a~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~-~~~aL~r~A 185 (230)
-..|+++|+.|-.++..+...=.+ ++...|++-++.-....+-..+++..++.|-.+..|||+ ||-.-=+.|
T Consensus 563 I~~L~~~Gi~v~mlTGd~~~~a~~-------ia~~lgi~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~A 635 (736)
T 3rfu_A 563 ILELQQSGIEIVMLTGDSKRTAEA-------VAGTLGIKKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKA 635 (736)
T ss_dssp HHHHHHHTCEEEEECSSCHHHHHH-------HHHHHTCCCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHS
T ss_pred HHHHHHCCCeEEEECCCCHHHHHH-------HHHHcCCCEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhC
Confidence 346778888888887766642112 223346665554445566778889999999999999999 764444455
Q ss_pred h
Q 046085 186 D 186 (230)
Q Consensus 186 D 186 (230)
|
T Consensus 636 d 636 (736)
T 3rfu_A 636 D 636 (736)
T ss_dssp S
T ss_pred C
Confidence 5
No 375
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=63.75 E-value=12 Score=32.04 Aligned_cols=65 Identities=9% Similarity=0.043 Sum_probs=43.3
Q ss_pred hhhhhhcEEEEEccccc--hHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeE----EEecC
Q 046085 108 VKLKRVWFWVRTMSDKL--QAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKT----GVAGY 175 (230)
Q Consensus 108 ~eLrRAGv~VrtV~dKp--qAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~T----VVVGd 175 (230)
.++++.|+.|-...--| .+.| ....+..+. +.+.+.|++.+...+...+++.|++.|+.. .++++
T Consensus 151 ~~~~~~g~~v~~~~~~~~~~~~d--~~~~l~~ik-~~~~~vii~~~~~~~~~~i~~qa~~~g~~~~~~~~i~~~ 221 (389)
T 3o21_A 151 EAAVQNNWQVTARSVGNIKDVQE--FRRIIEEMD-RRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN 221 (389)
T ss_dssp HHHHHTTCEEEEEECTTCCCTHH--HHHHHHHHH-TTTCCEEEEESCHHHHHHHHHHHHHHCSCSTTCEEEECC
T ss_pred HHhhcCCCeEEEEEecCCCCcHH--HHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHcCcccCCeEEEEcc
Confidence 45667787665332222 2224 333444444 568999999999999999999999999863 45554
No 376
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=63.47 E-value=8.6 Score=33.38 Aligned_cols=42 Identities=14% Similarity=0.101 Sum_probs=34.4
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 145 GCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
+.++.+|-. .|-..+++.|+++|++|+.|-+..+..|.+.||
T Consensus 76 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad 120 (329)
T 3eua_A 76 SLVILCSHSGNTPETVKAAAFARGKGALTIAMTFKPESPLAQEAQ 120 (329)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHSS
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCC
Confidence 566666643 366778899999999999999886789999999
No 377
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=63.25 E-value=5.1 Score=32.79 Aligned_cols=33 Identities=9% Similarity=0.066 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHhcCccCCCCCcccccccC
Q 046085 6 QESKEKKIKELFNQLEIKGVIRPAEPYVLVIVEG 39 (230)
Q Consensus 6 ~~r~~r~er~~l~~le~~g~i~p~epy~~C~VCG 39 (230)
+.+-...=+++|+.|+.-.... .+++-+|++||
T Consensus 113 E~~H~~~~~~~l~~l~~~~~~~-~~~~~~C~~CG 145 (170)
T 3pwf_A 113 EKIHAELYRKAKEKAEKGEDIE-IKKVYICPICG 145 (170)
T ss_dssp HHHHHHHHHHHHHHHTTTCCCC-CSCEEECTTTC
T ss_pred HHHHHHHHHHHHHHHhcCCcCC-CCCeeEeCCCC
Confidence 3344455567788887655553 33433999999
No 378
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=63.23 E-value=30 Score=24.61 Aligned_cols=48 Identities=13% Similarity=-0.028 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhhcCcce---EEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 130 LLRNYMVDMMDKRRFGC---LVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 130 AL~~~m~~~m~~r~vdc---lvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.....+.+.+...|+++ -..|...+-...+++.|++.+..-+|+|-..
T Consensus 70 ~~l~~~~~~~~~~g~~~~~~~~~~~~g~~~~~I~~~a~~~~~dliV~G~~~ 120 (147)
T 3hgm_A 70 EIAVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQG 120 (147)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEEEEESCHHHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHHHhcCCCccceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCC
Confidence 34445555565677765 3333333557889999999999999999874
No 379
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=62.52 E-value=28 Score=26.23 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=26.4
Q ss_pred HHHHHHhhhcCCccC-CchhhhhhhhcEEEEEccccchH
Q 046085 89 TYKMASKATLTPKVG-YSLVVKLKRVWFWVRTMSDKLQA 126 (230)
Q Consensus 89 KY~~AAr~vl~pkvg-ygLa~eLrRAGv~VrtV~dKpqA 126 (230)
.|.....+...|--| ..+-..|+..|+.+-.++..|..
T Consensus 74 ~~~~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~ 112 (216)
T 3kbb_A 74 EKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQR 112 (216)
T ss_dssp HHHHHHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred HHHHHHHHhcccCccHHHHHHHHHHcCCCcccccCCcHH
Confidence 344444555555544 56777899999999989988874
No 380
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=62.42 E-value=25 Score=29.35 Aligned_cols=42 Identities=12% Similarity=0.050 Sum_probs=28.8
Q ss_pred HHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 132 RNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 132 ~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
...+...+...+.|+| |+|...|...+ .|+..|+.+|.+.-.
T Consensus 103 ~~~l~~~l~~~~PD~V--v~~~~~~~~~~-aa~~~giP~v~~~~~ 144 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVL--LVDVCALIGRV-LGGLLDLPVVLHRWG 144 (391)
T ss_dssp HHHHHHHHHHHCCSEE--EEETTCHHHHH-HHHHTTCCEEEECCS
T ss_pred HHHHHHHHHhcCCCEE--EeCcchhHHHH-HHHHhCCCEEEEecC
Confidence 3445566656678865 34567777665 778899999998654
No 381
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=62.39 E-value=6.2 Score=31.45 Aligned_cols=62 Identities=8% Similarity=-0.093 Sum_probs=40.9
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..++++.|+.+..+....+.. .... .++|.|++.+.+.+ ...++.+.+.|+.+|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~---~~~~-------~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 89 (277)
T 3cs3_A 28 EGIKKGLALFDYEMIVCSGKKSHL---FIPE-------KMVDGAIILDWTFP-TKEIEKFAERGHSIVVLDRT 89 (277)
T ss_dssp HHHHHHHHTTTCEEEEEESTTTTT---CCCT-------TTCSEEEEECTTSC-HHHHHHHHHTTCEEEESSSC
T ss_pred HHHHHHHHHCCCeEEEEeCCCCHH---HHhh-------ccccEEEEecCCCC-HHHHHHHHhcCCCEEEEecC
Confidence 467778888888876543221110 0000 18999999876654 36778888899999999865
No 382
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=62.28 E-value=8 Score=34.19 Aligned_cols=42 Identities=10% Similarity=0.103 Sum_probs=34.3
Q ss_pred ceEEEEcCC---cchHHHHHHHHHc-CCeEEEecCCCCchhhhhhh
Q 046085 145 GCLVFVSDD---SDFVEVLQEATLR-CLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSDD---SDF~~lLr~ARer-~l~TVVVGd~~~~aL~r~AD 186 (230)
+.++.+|-. .+-..+++.|+++ |++||.|-+..+..|.+.||
T Consensus 99 dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~~ad 144 (373)
T 2aml_A 99 DLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFAD 144 (373)
T ss_dssp CEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCTTSGGGGGCS
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCCCChHHHhcC
Confidence 666667643 4567788999999 99999998876678999999
No 383
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.02 E-value=0.88 Score=31.41 Aligned_cols=25 Identities=24% Similarity=0.048 Sum_probs=15.3
Q ss_pred cCCCCCcccccccCCCcccCchHHHHHH
Q 046085 26 IRPAEPYVLVIVEGDLRLYNNDKLVNHF 53 (230)
Q Consensus 26 i~p~epy~~C~VCGdrkf~t~~kL~kHF 53 (230)
-.|..|| .|..|| ..| ....|..|-
T Consensus 12 ~c~~r~~-~C~~C~-~~~-~~~~L~~H~ 36 (75)
T 2d9k_A 12 ECPLRLA-VCQHCD-LEL-SILKLKEHE 36 (75)
T ss_dssp CCCCCCE-ECSSSC-CEE-CHHHHHHHH
T ss_pred cCCCccc-CCcccC-hHh-hHHHHHHHH
Confidence 3566666 677776 655 366666664
No 384
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=61.93 E-value=49 Score=24.97 Aligned_cols=88 Identities=15% Similarity=0.131 Sum_probs=50.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCc-----chHHHHHHHHHcCC---eEEEec
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDS-----DFVEVLQEATLRCL---KTGVAG 174 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDS-----DF~~lLr~ARer~l---~TVVVG 174 (230)
..+-..|+..|+.+-.++..+...= ..+.+.+. ..-++.+ +.|++. +=..+...++.-|+ .+++||
T Consensus 110 ~~~l~~l~~~g~~~~i~s~~~~~~~----~~~l~~~~l~~~f~~~-~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vG 184 (237)
T 4ex6_A 110 LEGLDRLSAAGFRLAMATSKVEKAA----RAIAELTGLDTRLTVI-AGDDSVERGKPHPDMALHVARGLGIPPERCVVIG 184 (237)
T ss_dssp HHHHHHHHHTTEEEEEECSSCHHHH----HHHHHHHTGGGTCSEE-ECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHHHhCCCcEEEEcCCChHHH----HHHHHHcCchhheeeE-EeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEc
Confidence 4566788999999999998886421 12222110 1223433 334432 11333444444565 589999
Q ss_pred CC-CCchhhhhhh----ccccccchHH
Q 046085 175 YM-NDGTLKRIAD----RLKWAYNSEV 196 (230)
Q Consensus 175 d~-~~~aL~r~AD----~leW~~~~e~ 196 (230)
|+ +|-...+.|. ++.|.++...
T Consensus 185 D~~~Di~~a~~aG~~~i~v~~g~~~~~ 211 (237)
T 4ex6_A 185 DGVPDAEMGRAAGMTVIGVSYGVSGPD 211 (237)
T ss_dssp SSHHHHHHHHHTTCEEEEESSSSSCHH
T ss_pred CCHHHHHHHHHCCCeEEEEecCCCCHH
Confidence 99 5555566666 6677766533
No 385
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=61.60 E-value=17 Score=30.14 Aligned_cols=42 Identities=17% Similarity=0.134 Sum_probs=31.3
Q ss_pred ceEEEEcCCc-----chHHHHHHHHHcCCeEEEecCCC---Cchhhhhhh
Q 046085 145 GCLVFVSDDS-----DFVEVLQEATLRCLKTGVAGYMN---DGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSDDS-----DF~~lLr~ARer~l~TVVVGd~~---~~aL~r~AD 186 (230)
..|||+||-. +....++.++..|+..++||-++ ...|..+|+
T Consensus 130 ~~iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~~~~~~~L~~iA~ 179 (281)
T 4hqf_A 130 QLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGINVAFNRFLVG 179 (281)
T ss_dssp EEEEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESSSCCHHHHHHHTT
T ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCCccCHHHHHhhhC
Confidence 5799999742 57788899999999887777652 234677775
No 386
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=61.53 E-value=20 Score=27.99 Aligned_cols=82 Identities=13% Similarity=0.109 Sum_probs=48.6
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC-CCchhhhh
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM-NDGTLKRI 184 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~-~~~aL~r~ 184 (230)
+-..|+..|+.+-.++.++... ...+ +...|++-++-..-.++=+..++..-+.. .+++|||+ +|-...+.
T Consensus 152 ~l~~l~~~g~~~~i~T~~~~~~----~~~~---~~~~gl~~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~ 223 (280)
T 3skx_A 152 AISKLKAIGIKCMMLTGDNRFV----AKWV---AEELGLDDYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQ 223 (280)
T ss_dssp HHHHHHHTTCEEEEECSSCHHH----HHHH---HHHHTCSEEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHH----HHHH---HHHcCChhHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHh
Confidence 4467888999999899888752 1222 22335543332222223344555554443 88999999 77777777
Q ss_pred hh-ccccccchH
Q 046085 185 AD-RLKWAYNSE 195 (230)
Q Consensus 185 AD-~leW~~~~e 195 (230)
|+ .+-|....+
T Consensus 224 Ag~~va~~~~~~ 235 (280)
T 3skx_A 224 ADVGIAIGAGTD 235 (280)
T ss_dssp SSEEEECSCCSS
T ss_pred CCceEEecCCcH
Confidence 77 445554433
No 387
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=61.51 E-value=11 Score=31.49 Aligned_cols=68 Identities=15% Similarity=0.034 Sum_probs=42.6
Q ss_pred hhhhhhhh--cEEEEE-ccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCC--eEEEecCC
Q 046085 106 LVVKLKRV--WFWVRT-MSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCL--KTGVAGYM 176 (230)
Q Consensus 106 La~eLrRA--Gv~Vrt-V~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l--~TVVVGd~ 176 (230)
+...|+.+ |+.|-. ..-.+...|. ...+..+. +.+.+.|++.+.+.+...+++.|++.|+ ...++|..
T Consensus 162 ~~~~l~~~~~g~~vv~~~~~~~~~~d~--~~~~~~i~-~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~ 234 (387)
T 3i45_A 162 FKELLLAARPEVTFVAEQWPALYKLDA--GPTVQALQ-QAEPEGLFNVLFGADLPKFVREGRVRGLFAGRQVVSML 234 (387)
T ss_dssp HHHHHHHHCTTCEEEEEECCCTTCCCH--HHHHHHHH-HTCCSEEEECCCTTHHHHHHHHHHHHTSSTTCEEEEEE
T ss_pred HHHHHHHhCCCcEEEeeecCCCCCcCH--HHHHHHHH-hCCCCEEEEcCccHHHHHHHHHHHHcCCCCCCeEEeec
Confidence 34556666 665432 2222233332 22233334 4689999999999999999999999998 35556643
No 388
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=61.45 E-value=29 Score=24.12 Aligned_cols=84 Identities=12% Similarity=0.068 Sum_probs=49.5
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHH----cCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATL----RCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARe----r~l~TVVVGd~~ 177 (230)
-.|...|.+.|+.|.++++..+| .+.+.....+.+++=.+ +.+-.++++..++ ..+..+++++..
T Consensus 21 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~ 91 (142)
T 3cg4_A 21 IAVKTILSDAGFHIISADSGGQC---------IDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKN 91 (142)
T ss_dssp HHHHHHHHHTTCEEEEESSHHHH---------HHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTEEEEEEECTT
T ss_pred HHHHHHHHHCCeEEEEeCCHHHH---------HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCCEEEEECCC
Confidence 45777888889998877765444 23344455666555332 3345578888887 356677776652
Q ss_pred C-----chhhhhhh-ccccccchHH
Q 046085 178 D-----GTLKRIAD-RLKWAYNSEV 196 (230)
Q Consensus 178 ~-----~aL~r~AD-~leW~~~~e~ 196 (230)
+ .++..-|+ ++.--..+++
T Consensus 92 ~~~~~~~~~~~g~~~~l~kp~~~~~ 116 (142)
T 3cg4_A 92 APDAKMIGLQEYVVDYITKPFDNED 116 (142)
T ss_dssp CCCCSSTTGGGGEEEEEESSCCHHH
T ss_pred CHHHHHHHHhcCccEEEeCCCCHHH
Confidence 1 12222233 6665555544
No 389
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=60.48 E-value=11 Score=33.21 Aligned_cols=43 Identities=16% Similarity=0.071 Sum_probs=34.8
Q ss_pred cceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 144 FGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 144 vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
=+.++.+|-. .|-..+++.|+++|++|+.|-+..+..|.+.||
T Consensus 83 ~dlvI~iS~SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~La~~aD 128 (352)
T 3g68_A 83 NTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDEISD 128 (352)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGGGCS
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCChHHHhCC
Confidence 3566666654 366778899999999999999876679999999
No 390
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=60.39 E-value=6.5 Score=33.60 Aligned_cols=59 Identities=8% Similarity=-0.136 Sum_probs=39.8
Q ss_pred hhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeE
Q 046085 107 VVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKT 170 (230)
Q Consensus 107 a~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~T 170 (230)
..+|++.|+-|-....-|. |. ...+..+. +.+.+.|++.+...+...+++.|++.|+..
T Consensus 175 ~~~~~~~g~~v~~~~~~~~--d~--~~~l~~i~-~~~~~vii~~~~~~~~~~~~~~a~~~g~~~ 233 (433)
T 4f11_A 175 TGVLYGEDIEISDTESFSN--DP--CTSVKKLK-GNDVRIILGQFDQNMAAKVFCCAYEENMYG 233 (433)
T ss_dssp HHHSSSSSCEEEEEEEESS--CC--HHHHHHHH-HTTCCEEEEECCHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHcCceEEEEeccCc--CH--HHHHHHHh-hCCCeEEEEeCcHHHHHHHHHHHHHcCCCC
Confidence 4456677776653322222 21 12222333 478999999999999999999999999975
No 391
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.28 E-value=4.7 Score=27.61 Aligned_cols=32 Identities=22% Similarity=0.081 Sum_probs=24.8
Q ss_pred ccCCCCCcccccccCCCcccCchHHHHHHHHHhHHH
Q 046085 25 VIRPAEPYVLVIVEGDLRLYNNDKLVNHFKQIHKRE 60 (230)
Q Consensus 25 ~i~p~epy~~C~VCGdrkf~t~~kL~kHFkqlHeRE 60 (230)
...|..|| .|..|| ..|. ...|..|-+ +|-.+
T Consensus 37 ~~c~~~~~-~C~~C~-~~~~-~~~l~~H~~-~c~~~ 68 (75)
T 2d9k_A 37 DYCGARTE-LCGNCG-RNVL-VKDLKTHPE-VCGRE 68 (75)
T ss_dssp HHHHHCEE-ECSSSC-CEEE-TTGGGTHHH-HBTTB
T ss_pred hHcCCCce-EcccCC-CcCc-HHHHHHHHH-HccCC
Confidence 56788999 999999 7776 689999964 45443
No 392
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=60.26 E-value=16 Score=27.07 Aligned_cols=53 Identities=4% Similarity=0.001 Sum_probs=30.8
Q ss_pred CcccccccCCCcccCchHHHHHHHHHhHHHHHH--------HhhhhhhcccchhhHhHhhhh
Q 046085 31 PYVLVIVEGDLRLYNNDKLVNHFKQIHKREQKK--------RLNQIESAKGKMREHLVGNYS 84 (230)
Q Consensus 31 py~~C~VCGdrkf~t~~kL~kHFkqlHeREr~K--------rlnri~s~kGkrR~~~~~~~~ 84 (230)
|+-.|..|| ..+.+.+....-.+.+-+-.++. +|.++....|--...|+..+-
T Consensus 35 ~~~~C~~CG-E~~~d~e~~~~~~~~~~e~~r~~~~~~~~~~~l~~~R~~~glsq~~la~~~g 95 (133)
T 3o9x_A 35 HGLYCVHCE-ESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFG 95 (133)
T ss_dssp EEEEESSSS-CEECCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHTTCCHHHHHHHHC
T ss_pred ceeECCCCC-CEeecHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHcCCCHHHHHHHHC
Confidence 666999999 87777766655444444433222 255555555555555555443
No 393
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=60.20 E-value=4 Score=31.33 Aligned_cols=64 Identities=9% Similarity=-0.032 Sum_probs=38.5
Q ss_pred Cchhhhhhhh-cEEEEEccccchHHHHHHHHHH---------HHHHhh----cCcceEEEEcC-CcchHHHHHHHHHcC
Q 046085 104 YSLVVKLKRV-WFWVRTMSDKLQAADVLLRNYM---------VDMMDK----RRFGCLVFVSD-DSDFVEVLQEATLRC 167 (230)
Q Consensus 104 ygLa~eLrRA-Gv~VrtV~dKpqAAD~AL~~~m---------~~~m~~----r~vdclvLVSD-DSDF~~lLr~ARer~ 167 (230)
..+|..|++. |+.|..+...|+.++.+....+ .+.+.. .+++.+++.+. +.....++..|+..|
T Consensus 52 ~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 52 TGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp HHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 4468889998 9988877777765544322111 012211 25677777554 444556677888866
No 394
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=60.10 E-value=8.3 Score=34.38 Aligned_cols=58 Identities=12% Similarity=0.091 Sum_probs=35.8
Q ss_pred EEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeE-EEecCC
Q 046085 117 VRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKT-GVAGYM 176 (230)
Q Consensus 117 VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~T-VVVGd~ 176 (230)
|-.++-.+.+.+.|+ .+...|.+.|+.+-+...++..+..-++.|...|+.. ||||+.
T Consensus 369 v~v~~~~~~~~~~a~--~l~~~Lr~~Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~ 427 (464)
T 4g84_A 369 VLVASAQKKLLEERL--KLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQ 427 (464)
T ss_dssp EEEECSSSSCHHHHH--HHHHHHHHTTCCEECCSCSSCCHHHHHHHHHHHTCCEEEECCHH
T ss_pred EEEEeCCHHHHHHHH--HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECch
Confidence 333444444444443 3555666778877665555556888888888888864 556653
No 395
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=60.04 E-value=32 Score=26.95 Aligned_cols=84 Identities=14% Similarity=0.086 Sum_probs=46.5
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCc-----chHHHHHHHHHcCC---eEEEecC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDS-----DFVEVLQEATLRCL---KTGVAGY 175 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDS-----DF~~lLr~ARer~l---~TVVVGd 175 (230)
.+-..|+..|+.+-.++..+.. +...+.+.+. ..-++.+ +.+++. +=..+...++.-|+ .+++|||
T Consensus 121 ~~l~~l~~~g~~~~i~t~~~~~----~~~~~l~~~gl~~~f~~~-~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD 195 (243)
T 2hsz_A 121 ETLEALKAQGYILAVVTNKPTK----HVQPILTAFGIDHLFSEM-LGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGD 195 (243)
T ss_dssp HHHHHHHHTTCEEEEECSSCHH----HHHHHHHHTTCGGGCSEE-ECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHCCCEEEEEECCcHH----HHHHHHHHcCchheEEEE-EecccCCCCCcCHHHHHHHHHHhCcChhhEEEEcC
Confidence 4456788999999889988764 2233322220 0113433 333332 11223333444455 5899999
Q ss_pred C-CCchhhhhhh----ccccccc
Q 046085 176 M-NDGTLKRIAD----RLKWAYN 193 (230)
Q Consensus 176 ~-~~~aL~r~AD----~leW~~~ 193 (230)
+ +|-...+.|. ++.|.+.
T Consensus 196 ~~~Di~~a~~aG~~~i~v~~g~~ 218 (243)
T 2hsz_A 196 SQNDIFAAHSAGCAVVGLTYGYN 218 (243)
T ss_dssp SHHHHHHHHHHTCEEEEESSSCS
T ss_pred CHHHHHHHHHCCCeEEEEcCCCC
Confidence 9 5455556666 6677664
No 396
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=59.96 E-value=23 Score=26.43 Aligned_cols=44 Identities=16% Similarity=0.138 Sum_probs=30.8
Q ss_pred CcceEEEEcCCc---c----hHHHHHHHHHcCCeEEEecCC--CCchhhhhhh
Q 046085 143 RFGCLVFVSDDS---D----FVEVLQEATLRCLKTGVAGYM--NDGTLKRIAD 186 (230)
Q Consensus 143 ~vdclvLVSDDS---D----F~~lLr~ARer~l~TVVVGd~--~~~aL~r~AD 186 (230)
.-..++|+||-. + .....+.+++.|+...+||-+ +...|..+|+
T Consensus 103 ~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~~i~i~~igvg~~~~~~L~~ia~ 155 (182)
T 1shu_X 103 TSSIIIALTDGKLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIAD 155 (182)
T ss_dssp SCEEEEEEECCCCCTTHHHHHHHHHHHHHHTTCEEEEEECSSCCHHHHHHHSS
T ss_pred CCeEEEEECCCCcCCCCchhHHHHHHHHHhCCCEEEEEeCCcCCHHHHHHHhC
Confidence 347899999843 2 244678888999887666654 5566777777
No 397
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=59.81 E-value=33 Score=25.86 Aligned_cols=51 Identities=8% Similarity=-0.134 Sum_probs=33.7
Q ss_pred HHHHHHHhhcCcc-eEEEEcCCcchHHHHHHHHHcCCeEEEecCCCCchhhh
Q 046085 133 NYMVDMMDKRRFG-CLVFVSDDSDFVEVLQEATLRCLKTGVAGYMNDGTLKR 183 (230)
Q Consensus 133 ~~m~~~m~~r~vd-clvLVSDDSDF~~lLr~ARer~l~TVVVGd~~~~aL~r 183 (230)
..+.+.+...|+. +-..|-..+-...|++.|++.+...||+|-...+.+++
T Consensus 84 ~~~~~~~~~~gv~~v~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g~~~~~~ 135 (163)
T 1tq8_A 84 HDAKERAHNAGAKNVEERPIVGAPVDALVNLADEEKADLLVVGNVGLSTIAG 135 (163)
T ss_dssp HHHHHHHHTTTCCEEEEEEECSSHHHHHHHHHHHTTCSEEEEECCCCCSHHH
T ss_pred HHHHHHHHHcCCCeEEEEEecCCHHHHHHHHHHhcCCCEEEECCCCCCcccc
Confidence 3444455456776 43333334457889999999999999999874444443
No 398
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=59.69 E-value=41 Score=23.42 Aligned_cols=65 Identities=9% Similarity=0.102 Sum_probs=41.9
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEc-CCcchHHHHHHHHHc--CCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVS-DDSDFVEVLQEATLR--CLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVS-DDSDF~~lLr~ARer--~l~TVVVGd~~ 177 (230)
-.|...|.+.|+.|.++++..+| .+.+.....+.+++=. .+.+-.++++..++. ++..+++++..
T Consensus 18 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (142)
T 2qxy_A 18 LAVKNALEKDGFNVIWAKNEQEA---------FTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVLSAYV 85 (142)
T ss_dssp HHHHHHHGGGTCEEEEESSHHHH---------HHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEEESCC
T ss_pred HHHHHHHHhCCCEEEEECCHHHH---------HHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEEECCC
Confidence 35677788899999877765444 2334445677666543 233344667777774 57788887764
No 399
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.69 E-value=7.4 Score=28.62 Aligned_cols=33 Identities=24% Similarity=0.421 Sum_probs=25.2
Q ss_pred CCcccccccCCCccc-------CchHHHHHHHHHhHHHHHH
Q 046085 30 EPYVLVIVEGDLRLY-------NNDKLVNHFKQIHKREQKK 63 (230)
Q Consensus 30 epy~~C~VCGdrkf~-------t~~kL~kHFkqlHeREr~K 63 (230)
.....|..|| ..+. .=..|.+|++-.|..|=.|
T Consensus 26 ~~~A~Ck~C~-k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~ 65 (76)
T 2djr_A 26 NQYATCRLCG-RQVSRGPGVNVGTTALWKHLKSMHREELEK 65 (76)
T ss_dssp CSCEEESSSC-CBCCCCSSCCSSSCHHHHHHHHTTHHHHHH
T ss_pred CCEEECCCCC-CccCCCCCCCCchHHHHHHHHHHCHHHHHh
Confidence 3466999999 7665 1248999999999888544
No 400
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=59.51 E-value=10 Score=33.41 Aligned_cols=47 Identities=21% Similarity=0.274 Sum_probs=36.5
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh---ccccc
Q 046085 145 GCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD---RLKWA 191 (230)
Q Consensus 145 dclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD---~leW~ 191 (230)
+.++.+|-. .|-..+++.|+++|++|+.|-+..+..|.+.|| .+++.
T Consensus 91 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~~g 143 (347)
T 3fkj_A 91 SVVILASQQGNTAETVAAARVAREKGAATIGLVYQPDTPLCEYSDYIIEYQWA 143 (347)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHTCSEEEECBCC
T ss_pred CEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCChHHhhcCeEEEeccC
Confidence 455555543 366778899999999999999886789999999 44555
No 401
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=59.22 E-value=12 Score=33.43 Aligned_cols=44 Identities=18% Similarity=0.085 Sum_probs=35.8
Q ss_pred CcceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 143 RFGCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 143 ~vdclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
.=+.++.+|-. .|-..+++.|+++|++|+.|-+..+..|.+.||
T Consensus 97 ~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~aD 143 (366)
T 3knz_A 97 GKALVVGISQGGGSLSTLAAMERARNVGHITASMAGVAPATIDRAAD 143 (366)
T ss_dssp CSEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGGGGCS
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhhhhcC
Confidence 34666677654 467788999999999999998876779999999
No 402
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=58.96 E-value=18 Score=27.66 Aligned_cols=41 Identities=15% Similarity=0.139 Sum_probs=29.2
Q ss_pred eEEEEcCC---cchHHHHHHHHHcCCeEEEecCC---CCchhhhhhh
Q 046085 146 CLVFVSDD---SDFVEVLQEATLRCLKTGVAGYM---NDGTLKRIAD 186 (230)
Q Consensus 146 clvLVSDD---SDF~~lLr~ARer~l~TVVVGd~---~~~aL~r~AD 186 (230)
.++++||+ .+.....+.+++.|++.++||-+ +...|..+|.
T Consensus 111 ~vivltdg~~~~~~~~~~~~~~~~gi~v~~igvG~~~~~~~L~~iA~ 157 (189)
T 1atz_A 111 AVVILVTDVSVDSVDAAADAARSNRVTVFPIGIGDRYDAAQLRILAG 157 (189)
T ss_dssp EEEEEECSCCSSCCHHHHHHHHHTTEEEEEEEESSSSCHHHHHHHTG
T ss_pred EEEEEeCCCCCchHHHHHHHHHHCCCEEEEEEcCCcCCHHHHHHHHC
Confidence 36777775 35788899999999887777655 2345666665
No 403
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=58.87 E-value=21 Score=28.55 Aligned_cols=63 Identities=13% Similarity=0.178 Sum_probs=51.0
Q ss_pred chhhhhhh-hcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC-------CcchHHHHHHHHHcCCeEE
Q 046085 105 SLVVKLKR-VWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD-------DSDFVEVLQEATLRCLKTG 171 (230)
Q Consensus 105 gLa~eLrR-AGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD-------DSDF~~lLr~ARer~l~TV 171 (230)
|=+.-|++ +|+.|..|...|.--| -++.++|.+..|+.++...| +.|=..|.|.|-+.++-..
T Consensus 39 gTa~~L~e~~Gl~v~~v~k~~~eG~----p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~ 109 (134)
T 2xw6_A 39 TTGRRIEEATGLTVEKLLSGPLGGD----QQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLA 109 (134)
T ss_dssp HHHHHHHHHHCCCCEECSCGGGTHH----HHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHhhCceEEEEEecCCCCc----chHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeE
Confidence 45778999 9999999987773333 37889998888999999998 6788889999988887544
No 404
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=58.85 E-value=21 Score=27.45 Aligned_cols=38 Identities=13% Similarity=0.035 Sum_probs=24.0
Q ss_pred HHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCC
Q 046085 136 VDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMN 177 (230)
Q Consensus 136 ~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~ 177 (230)
.+++ ..|+..+++ +....-..+++.|++.|++ +||..+
T Consensus 95 ~~~~-~~gi~~i~~-~~g~~~~~l~~~a~~~Gi~--vvGpnc 132 (144)
T 2d59_A 95 EQAI-KKGAKVVWF-QYNTYNREASKKADEAGLI--IVANRC 132 (144)
T ss_dssp HHHH-HHTCSEEEE-CTTCCCHHHHHHHHHTTCE--EEESCC
T ss_pred HHHH-HcCCCEEEE-CCCchHHHHHHHHHHcCCE--EEcCCc
Confidence 3444 367776653 4444456778888888877 566655
No 405
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=58.81 E-value=11 Score=32.13 Aligned_cols=60 Identities=10% Similarity=0.066 Sum_probs=39.6
Q ss_pred hhhhhhh-hcEEEEEcccc-chHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCe
Q 046085 106 LVVKLKR-VWFWVRTMSDK-LQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLK 169 (230)
Q Consensus 106 La~eLrR-AGv~VrtV~dK-pqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~ 169 (230)
+..+|.+ .|+-|-...-- +...|. ...+.. |.+ +.+.|++.+...+...+++.|++.|+.
T Consensus 171 ~~~~~~~~~g~~v~~~~~~~~~~~d~--~~~l~~-i~~-~~~viv~~~~~~~~~~~~~~a~~~g~~ 232 (435)
T 1dp4_A 171 LYMRVRERLNITVNHQEFVEGDPDHY--PKLLRA-VRR-KGRVIYICSSPDAFRNLMLLALNAGLT 232 (435)
T ss_dssp HHHHHHHHHCCEEEEEEECTTCGGGH--HHHHHH-HHH-HCSEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhhcCeEEEEEEEecCchhhH--HHHHHH-HHh-hCceEEEecChHHHHHHHHHHHHcCCC
Confidence 3456666 78766532211 234443 222323 324 789999999999999999999999986
No 406
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=58.77 E-value=27 Score=24.16 Aligned_cols=64 Identities=13% Similarity=0.050 Sum_probs=40.5
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC-------CcchHHHHHHHHHc--CCeEEEec
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD-------DSDFVEVLQEATLR--CLKTGVAG 174 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD-------DSDF~~lLr~ARer--~l~TVVVG 174 (230)
-.|...|.+.|+.|.++++..+| .+.+.....+.+++=.+ +.+=.++++..++. ++..++++
T Consensus 17 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls 87 (140)
T 2qr3_A 17 TAVQLLLKNHFSKVITLSSPVSL---------STVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFT 87 (140)
T ss_dssp HHHHHHHTTTSSEEEEECCHHHH---------HHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEE
T ss_pred HHHHHHHHhCCcEEEEeCCHHHH---------HHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEE
Confidence 35677788889998877665443 22333456666665433 33445677777774 67888887
Q ss_pred CC
Q 046085 175 YM 176 (230)
Q Consensus 175 d~ 176 (230)
+.
T Consensus 88 ~~ 89 (140)
T 2qr3_A 88 AY 89 (140)
T ss_dssp EG
T ss_pred CC
Confidence 76
No 407
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=58.32 E-value=12 Score=32.73 Aligned_cols=42 Identities=17% Similarity=0.139 Sum_probs=34.1
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 145 GCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
+.++.+|-. .|-...++.|+++|++|+.|-+..+..|.+.||
T Consensus 92 dl~i~iS~SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad 136 (334)
T 3hba_A 92 GLVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVD 136 (334)
T ss_dssp CEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGGGTSS
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHHHhcC
Confidence 556666644 366778899999999999999876679999999
No 408
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=58.32 E-value=8.9 Score=31.24 Aligned_cols=75 Identities=8% Similarity=-0.016 Sum_probs=41.3
Q ss_pred cCCchhhhhhhhcEEEEEccccchH-----HHHHHHHHHHHHHhhcCcceEEEEcCCcc------------------hHH
Q 046085 102 VGYSLVVKLKRVWFWVRTMSDKLQA-----ADVLLRNYMVDMMDKRRFGCLVFVSDDSD------------------FVE 158 (230)
Q Consensus 102 vgygLa~eLrRAGv~VrtV~dKpqA-----AD~AL~~~m~~~m~~r~vdclvLVSDDSD------------------F~~ 158 (230)
+|..|+..|.+.|..|..+...+.. +|+.=...+.+++...++|.|+-...... ...
T Consensus 14 iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~ 93 (315)
T 2ydy_A 14 LGRAVHKEFQQNNWHAVGCGFRRARPKFEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGN 93 (315)
T ss_dssp HHHHHHHHHHTTTCEEEEEC------------------CHHHHHHHCCSEEEECC-------------------CHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEccCCCCCCeEEecCCCHHHHHHHHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHH
Confidence 3567888999999998866544333 45544444445554336888876543221 135
Q ss_pred HHHHHHHcCCeEEEecCC
Q 046085 159 VLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 159 lLr~ARer~l~TVVVGd~ 176 (230)
+++.|++.|.+.|.++..
T Consensus 94 l~~a~~~~~~~~v~~SS~ 111 (315)
T 2ydy_A 94 LAKEAAAVGAFLIYISSD 111 (315)
T ss_dssp HHHHHHHHTCEEEEEEEG
T ss_pred HHHHHHHcCCeEEEEchH
Confidence 788888888887777654
No 409
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=58.30 E-value=1.7 Score=35.70 Aligned_cols=78 Identities=17% Similarity=0.068 Sum_probs=0.0
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEecCCCCch
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLR-----CLKTGVAGYMNDGT 180 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer-----~l~TVVVGd~~~~a 180 (230)
|+..|+.+|+.|..++---...-......+.+.+....+|+++ +++-|-+..++..+.+. +++.++||..+-.+
T Consensus 148 L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~~~d~v~-ftS~s~v~~~~~~~~~~~~~l~~~~~~aIG~~Ta~~ 226 (254)
T 4es6_A 148 LAERLRGQGVQVDYLPLYRRRAPDYPAGELLARVRAERLNGLV-VSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEM 226 (254)
T ss_dssp HHHHHHHTTCEEEEEECEEEECCCCCTTHHHHHHHHTTCCEEE-CCSHHHHHHHHHHHGGGHHHHTTSCEEESSHHHHHH
T ss_pred HHHHHHHCCCEEEEEeEEEeeCCCCCHHHHHHHHHhCCCCEEE-EcCHHHHHHHHHHhhHHHHHHhCCeEEEECHHHHHH
Q ss_pred hhhh
Q 046085 181 LKRI 184 (230)
Q Consensus 181 L~r~ 184 (230)
+...
T Consensus 227 l~~~ 230 (254)
T 4es6_A 227 AREL 230 (254)
T ss_dssp HHHT
T ss_pred HHHc
No 410
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=58.27 E-value=11 Score=27.61 Aligned_cols=71 Identities=13% Similarity=0.107 Sum_probs=39.6
Q ss_pred CCchhhhhhhhcEEEEEccccchHHHHHHHH------------HHHHHHhhcCcceEEEEcCC-cchHHHHHHHHHcCCe
Q 046085 103 GYSLVVKLKRVWFWVRTMSDKLQAADVLLRN------------YMVDMMDKRRFGCLVFVSDD-SDFVEVLQEATLRCLK 169 (230)
Q Consensus 103 gygLa~eLrRAGv~VrtV~dKpqAAD~AL~~------------~m~~~m~~r~vdclvLVSDD-SDF~~lLr~ARer~l~ 169 (230)
|..+|..|.+.|+.|..+...|...+.+... ..+..+.-.+++.+++.++| ..-..++..|++.|..
T Consensus 18 G~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~ 97 (141)
T 3llv_A 18 GVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDV 97 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCc
Confidence 4558889999999998777777654433221 11111111346666665552 2234456677776644
Q ss_pred EEEe
Q 046085 170 TGVA 173 (230)
Q Consensus 170 TVVV 173 (230)
.+++
T Consensus 98 ~iia 101 (141)
T 3llv_A 98 YAIV 101 (141)
T ss_dssp CEEE
T ss_pred eEEE
Confidence 4443
No 411
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=58.13 E-value=37 Score=25.29 Aligned_cols=86 Identities=23% Similarity=0.205 Sum_probs=46.9
Q ss_pred cCCccC-CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCc----ceEEEE---------cC-----CcchHH
Q 046085 98 LTPKVG-YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRF----GCLVFV---------SD-----DSDFVE 158 (230)
Q Consensus 98 l~pkvg-ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~v----dclvLV---------SD-----DSDF~~ 158 (230)
+.|.-| -.+-..|+..|+.+-.+|..+.. ....+.+.+ |+ +.++-+ |+ -++-..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~----~~~~~l~~~---gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~ 146 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDL----ATNHYRDLL---HLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEM 146 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHH----HHHHHHHHH---TCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchh----HHHHHHHHc---CcchhccceeEEeCCEEEeeeccCCCCCCChHHH
Confidence 334433 45667899999999999988764 122222222 43 333211 21 123233
Q ss_pred HHHHHHHcCC---eEEEecCC-CCchhhhhhh-cccc
Q 046085 159 VLQEATLRCL---KTGVAGYM-NDGTLKRIAD-RLKW 190 (230)
Q Consensus 159 lLr~ARer~l---~TVVVGd~-~~~aL~r~AD-~leW 190 (230)
+...+..-|+ .++.|||+ +|-...+.|. .+-|
T Consensus 147 ~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~ 183 (217)
T 3m1y_A 147 LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF 183 (217)
T ss_dssp HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE
T ss_pred HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE
Confidence 3333444465 58999998 5555556666 3344
No 412
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=58.06 E-value=28 Score=29.78 Aligned_cols=74 Identities=11% Similarity=0.204 Sum_probs=56.8
Q ss_pred hhcCCccCCch-hhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCC---cchHHHHHHHHHc--CCe
Q 046085 96 ATLTPKVGYSL-VVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDD---SDFVEVLQEATLR--CLK 169 (230)
Q Consensus 96 ~vl~pkvgygL-a~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDD---SDF~~lLr~ARer--~l~ 169 (230)
-++.|-+.||. ..+...- -=|++=.|.+. .++..++.+++...|+.-||+|... . +..++++++.+ ++.
T Consensus 66 ~lv~P~i~yG~~s~~h~~f---PGTisl~~~tl-~~~l~di~~sl~~~G~rrlvivNgHGGN~-l~~a~~~l~~~~~~~~ 140 (254)
T 3lub_A 66 CMVMPPVPFGAHNPGQREL---PFCIHTRYATQ-QAILEDIVSSLHVQGFRKLLILSGHGGNN-FKGMIRDLAFEYPDFL 140 (254)
T ss_dssp EEECCCBCCBCCCTTTTTS---TTCCBCCHHHH-HHHHHHHHHHHHHTTCCEEEEEESCTTCC-CHHHHHHHHHHCTTCE
T ss_pred EEEeCCccccCCCccccCc---CCeEEeCHHHH-HHHHHHHHHHHHHcCCCEEEEEeCCchHH-HHHHHHHHHHHCCCcE
Confidence 47889999999 7776432 12666667654 6788999999988999999999864 5 88888888886 677
Q ss_pred EEEec
Q 046085 170 TGVAG 174 (230)
Q Consensus 170 TVVVG 174 (230)
.+.+.
T Consensus 141 v~~~~ 145 (254)
T 3lub_A 141 IAAAN 145 (254)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 66654
No 413
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=57.61 E-value=5.6 Score=33.25 Aligned_cols=68 Identities=13% Similarity=0.124 Sum_probs=43.3
Q ss_pred hhhhhhhhcEEEEEccc-cchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeE---EEecCC
Q 046085 106 LVVKLKRVWFWVRTMSD-KLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKT---GVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~VrtV~d-KpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~T---VVVGd~ 176 (230)
+...|+++|+.|-.... .+...|.. ..+..+. +.+.+.|++.++..+...+++.+++.|++. ++.|+.
T Consensus 162 ~~~~~~~~G~~v~~~~~~~~~~~d~~--~~l~~i~-~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 233 (379)
T 3n0w_A 162 IRRELTAGGGQIVGSVRFPFETQDFS--SYLLQAK-ASGAQLIVSTSGGAANINIMKQAREFGLPSKTQKVGGMI 233 (379)
T ss_dssp HHHHHHHHTCEEEEEEEECTTCCCCH--HHHHHHH-HHTCSEEEECCCHHHHHHHHHHHHHTTCSCSSCEEECCB
T ss_pred HHHHHHHcCCEEEEEEeCCCCCCCHH--HHHHHHH-HCCCCEEEEecccchHHHHHHHHHHcCCCCCCcEEEecc
Confidence 44566777776542211 11222321 2233334 468899998888789999999999999986 566655
No 414
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=57.57 E-value=44 Score=25.90 Aligned_cols=83 Identities=16% Similarity=0.141 Sum_probs=48.0
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCc-----chHHHHHHHHHcCC---eEEEecCC
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDS-----DFVEVLQEATLRCL---KTGVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDS-----DF~~lLr~ARer~l---~TVVVGd~ 176 (230)
+-..|+..|+.+-.++.++... ...+++.+. . -++.++ -|++. +=..++..++.-|+ .+++|||+
T Consensus 118 ~l~~l~~~g~~~~i~t~~~~~~----~~~~l~~~~l~-~f~~~~-~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs 191 (240)
T 2hi0_A 118 LMKNLRQKGVKLAVVSNKPNEA----VQVLVEELFPG-SFDFAL-GEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDS 191 (240)
T ss_dssp HHHHHHHTTCEEEEEEEEEHHH----HHHHHHHHSTT-TCSEEE-EECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESS
T ss_pred HHHHHHHCCCEEEEEeCCCHHH----HHHHHHHcCCc-ceeEEE-ecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCC
Confidence 4456888999998899888641 222222221 1 355443 34432 22334444555566 48999999
Q ss_pred -CCchhhhhhh----ccccccch
Q 046085 177 -NDGTLKRIAD----RLKWAYNS 194 (230)
Q Consensus 177 -~~~aL~r~AD----~leW~~~~ 194 (230)
+|-.-.+.|. ++.|.+..
T Consensus 192 ~~Di~~a~~aG~~~v~v~~~~~~ 214 (240)
T 2hi0_A 192 EIDIQTARNSEMDEIAVNWGFRS 214 (240)
T ss_dssp HHHHHHHHHTTCEEEEESSSSSC
T ss_pred HHHHHHHHHCCCeEEEECCCCCc
Confidence 5445566666 46776644
No 415
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=57.38 E-value=32 Score=29.61 Aligned_cols=82 Identities=24% Similarity=0.195 Sum_probs=51.5
Q ss_pred hhhhhhh-cE--EEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCc----c---hHHHHHHH-HHcCCeEEEecC
Q 046085 107 VVKLKRV-WF--WVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDS----D---FVEVLQEA-TLRCLKTGVAGY 175 (230)
Q Consensus 107 a~eLrRA-Gv--~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDS----D---F~~lLr~A-Rer~l~TVVVGd 175 (230)
|..|+.+ |- .|..|+-.|..++.+|+.- + ..|+|-+++|+|+. | ++.+|..+ ++.+...|+.|.
T Consensus 46 A~~Lke~~g~~~~V~av~~G~~~~~~~lr~a----l-a~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~ 120 (264)
T 1o97_C 46 AMKIKESSDTDVEVVVVSVGPDRVDESLRKC----L-AKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGV 120 (264)
T ss_dssp HHHHHHHCSSCCEEEEEEESCGGGHHHHHHH----H-HTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHhcCCCceEEEEEeCchhHHHHHHHH----H-hcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 4455543 33 5666777775555555543 3 35999999999753 1 34455544 345889999998
Q ss_pred CC-----Cchhhhhhhccccccc
Q 046085 176 MN-----DGTLKRIADRLKWAYN 193 (230)
Q Consensus 176 ~~-----~~aL~r~AD~leW~~~ 193 (230)
.+ .+...++|-.|.|-.-
T Consensus 121 ~s~d~~~~~v~p~lA~~L~~~~v 143 (264)
T 1o97_C 121 QSSDQAYASTGISVASYLNWPHA 143 (264)
T ss_dssp CCTTTCCCCHHHHHHHHHTCCEE
T ss_pred CccCCchhhHHHHHHHHhCCCcc
Confidence 75 3356677776666443
No 416
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=57.26 E-value=8.6 Score=30.51 Aligned_cols=33 Identities=15% Similarity=0.211 Sum_probs=25.7
Q ss_pred cceEEEEcCCc-----chHHHHHHHHHcCCeEEEecCC
Q 046085 144 FGCLVFVSDDS-----DFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 144 vdclvLVSDDS-----DF~~lLr~ARer~l~TVVVGd~ 176 (230)
-..+||+||-. +...+++.+++.|++.++||-+
T Consensus 125 ~~~iillTDG~~~~~~~~~~~~~~~~~~gi~v~~igvG 162 (223)
T 2b2x_A 125 KKVMVIVTDGESHDNYRLKQVIQDCEDENIQRFSIAIL 162 (223)
T ss_dssp EEEEEEEESSCCTTGGGHHHHHHHHHTTTEEEEEEEEC
T ss_pred CeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEec
Confidence 35799999732 3677889999999998888765
No 417
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=56.72 E-value=28 Score=26.85 Aligned_cols=72 Identities=7% Similarity=-0.100 Sum_probs=40.9
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHH-cCC---eEEEecCC-CCch
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATL-RCL---KTGVAGYM-NDGT 180 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARe-r~l---~TVVVGd~-~~~a 180 (230)
+-..|+++|+.|-.+|..+... ...+ +...|++-++ +....-..+++.+.+ -|+ .++.|||+ +|-.
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~----~~~~---l~~lgl~~~~--~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~ 131 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKL----VEDR---CATLGITHLY--QGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWP 131 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHH----HHHH---HHHHTCCEEE--CSCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHH
T ss_pred HHHHHHHCCCeEEEEeCCChHH----HHHH---HHHcCCceee--cCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHH
Confidence 4567888999999899887751 1222 2223554322 222222444444433 453 58888888 5555
Q ss_pred hhhhhh
Q 046085 181 LKRIAD 186 (230)
Q Consensus 181 L~r~AD 186 (230)
..+.|.
T Consensus 132 ~a~~ag 137 (188)
T 2r8e_A 132 VMEKVG 137 (188)
T ss_dssp HHTTSS
T ss_pred HHHHCC
Confidence 566666
No 418
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=56.23 E-value=57 Score=23.97 Aligned_cols=88 Identities=11% Similarity=0.046 Sum_probs=50.7
Q ss_pred Cchhhhhhhhc-EEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCcchHHHHHHHHHcCCe---EEEecCC--
Q 046085 104 YSLVVKLKRVW-FWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDSDFVEVLQEATLRCLK---TGVAGYM-- 176 (230)
Q Consensus 104 ygLa~eLrRAG-v~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDSDF~~lLr~ARer~l~---TVVVGd~-- 176 (230)
..+-..|+..| +.+-.++..+... .....+.+. ..-++.++ .++.++=..+...+..-|+. +++|||+
T Consensus 111 ~~~l~~l~~~g~~~~~i~t~~~~~~----~~~~l~~~~~~~~f~~~~-~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~ 185 (234)
T 3ddh_A 111 KETLKTLKETGKYKLVVATKGDLLD----QENKLERSGLSPYFDHIE-VMSDKTEKEYLRLLSILQIAPSELLMVGNSFK 185 (234)
T ss_dssp HHHHHHHHHHCCCEEEEEEESCHHH----HHHHHHHHTCGGGCSEEE-EESCCSHHHHHHHHHHHTCCGGGEEEEESCCC
T ss_pred HHHHHHHHhCCCeEEEEEeCCchHH----HHHHHHHhCcHhhhheee-ecCCCCHHHHHHHHHHhCCCcceEEEECCCcH
Confidence 34567789999 8888787666531 122222221 12345444 45556655555556666764 8999998
Q ss_pred CCchhhhhhh----cc----ccccchHH
Q 046085 177 NDGTLKRIAD----RL----KWAYNSEV 196 (230)
Q Consensus 177 ~~~aL~r~AD----~l----eW~~~~e~ 196 (230)
+|-...+.|- ++ .|.+..+.
T Consensus 186 ~Di~~a~~aG~~~v~v~~~~~~g~~~~~ 213 (234)
T 3ddh_A 186 SDIQPVLSLGGYGVHIPFEVMWKHEVTE 213 (234)
T ss_dssp CCCHHHHHHTCEEEECCCCTTCCCC---
T ss_pred HHhHHHHHCCCeEEEecCCcccccCCcc
Confidence 5666666666 44 67665544
No 419
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=56.10 E-value=10 Score=30.53 Aligned_cols=73 Identities=8% Similarity=-0.054 Sum_probs=46.3
Q ss_pred cCCchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc------------------hHHHHHHH
Q 046085 102 VGYSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD------------------FVEVLQEA 163 (230)
Q Consensus 102 vgygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD------------------F~~lLr~A 163 (230)
+|-.|+..|.+.|+.|..+...+ .|+.=...+.+++...++|.|+-....+. ...+++.|
T Consensus 24 iG~~l~~~L~~~g~~V~~~~r~~--~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~ 101 (292)
T 1vl0_A 24 LGREIQKQLKGKNVEVIPTDVQD--LDITNVLAVNKFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAA 101 (292)
T ss_dssp HHHHHHHHHTTSSEEEEEECTTT--CCTTCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEeccCcc--CCCCCHHHHHHHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 35678899999999998664331 22222223334443237999887765433 14678888
Q ss_pred HHcCCeEEEecCC
Q 046085 164 TLRCLKTGVAGYM 176 (230)
Q Consensus 164 Rer~l~TVVVGd~ 176 (230)
++.|++.|.++..
T Consensus 102 ~~~~~~iv~~SS~ 114 (292)
T 1vl0_A 102 YSVGAEIVQISTD 114 (292)
T ss_dssp HHHTCEEEEEEEG
T ss_pred HHcCCeEEEechH
Confidence 8888877777653
No 420
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=55.64 E-value=25 Score=29.02 Aligned_cols=42 Identities=19% Similarity=0.260 Sum_probs=31.3
Q ss_pred ceEEEEcCCc-----chHHHHHHHHHcCCeEEEecCCC--Cch-hhhhhh
Q 046085 145 GCLVFVSDDS-----DFVEVLQEATLRCLKTGVAGYMN--DGT-LKRIAD 186 (230)
Q Consensus 145 dclvLVSDDS-----DF~~lLr~ARer~l~TVVVGd~~--~~a-L~r~AD 186 (230)
..|||+||-. +....++.++..|+..++||-++ +.. |..+|+
T Consensus 127 ~~iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~~~~~~~L~~iA~ 176 (266)
T 4hqo_A 127 QLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGINHQFNRLIAG 176 (266)
T ss_dssp EEEEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSSSCCHHHHHHHHT
T ss_pred eEEEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCcccCHHHHHHhhC
Confidence 5789999743 57788899999999988877662 333 577774
No 421
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=55.47 E-value=43 Score=24.52 Aligned_cols=21 Identities=14% Similarity=0.090 Sum_probs=13.4
Q ss_pred hhhhhhhhcEEEEEccccchH
Q 046085 106 LVVKLKRVWFWVRTMSDKLQA 126 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqA 126 (230)
+-..|++.|+.+-.+|..|..
T Consensus 44 ~l~~l~~~g~~~~i~T~~~~~ 64 (162)
T 2p9j_A 44 GIKLLQKMGITLAVISGRDSA 64 (162)
T ss_dssp HHHHHHTTTCEEEEEESCCCH
T ss_pred HHHHHHHCCCEEEEEeCCCcH
Confidence 345666777777777766653
No 422
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=55.35 E-value=12 Score=32.71 Aligned_cols=42 Identities=17% Similarity=0.127 Sum_probs=33.6
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcC-CeEEEecCCCCchhhhhhh
Q 046085 145 GCLVFVSDD---SDFVEVLQEATLRC-LKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSDD---SDF~~lLr~ARer~-l~TVVVGd~~~~aL~r~AD 186 (230)
+.++.+|-. .+-..+++.|+++| ++|+.|-+..+..|.+.||
T Consensus 101 dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad 146 (368)
T 1moq_A 101 SLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESD 146 (368)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSS
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCC
Confidence 566666643 46667888999999 9999998876679999999
No 423
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=55.05 E-value=41 Score=25.75 Aligned_cols=82 Identities=15% Similarity=0.120 Sum_probs=51.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHc--CCeEEEecCCCCchh
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLR--CLKTGVAGYMNDGTL 181 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer--~l~TVVVGd~~~~aL 181 (230)
-+|...|...|+.|.++++..+| .+.+.....|.++ .. +.+=.++++..|+. .+..+++....+...
T Consensus 14 ~~l~~~L~~~g~~v~~~~~~~~a---------l~~l~~~~~dlvi-lp-~~~g~~~~~~lr~~~~~~~ii~lt~~~~~~~ 82 (223)
T 2hqr_A 14 GEIEKGLNVKGFMADVTESLEDG---------EYLMDIRNYDLVM-VS-DKNALSFVSRIKEKHSSIVVLVSSDNPTSEE 82 (223)
T ss_dssp HHHHHHHGGGTCCEEEESSHHHH---------HHHHTTSCCSEEE-EC-CTTHHHHHHHHHHHCTTSEEEEEESSCCHHH
T ss_pred HHHHHHHHHCCcEEEEECCHHHH---------HHHHhcCCCCEEE-eC-CCCHHHHHHHHHhCCCCCcEEEEECCCCHHH
Confidence 46777888889988877665444 2334445678777 44 44445777777775 678888877643222
Q ss_pred -----hhhhh-cccccc-chHH
Q 046085 182 -----KRIAD-RLKWAY-NSEV 196 (230)
Q Consensus 182 -----~r~AD-~leW~~-~~e~ 196 (230)
..-|| ++.-.. ++++
T Consensus 83 ~~~~~~~Ga~~~l~Kp~~~~~~ 104 (223)
T 2hqr_A 83 EVHAFEQGADDYIAKPYRSIKA 104 (223)
T ss_dssp HHHHHHHTCSEEEETTCSCTHH
T ss_pred HHHHHHcCCCEEEECCCCCHHH
Confidence 22223 776666 5554
No 424
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=54.97 E-value=25 Score=26.86 Aligned_cols=64 Identities=13% Similarity=-0.030 Sum_probs=42.2
Q ss_pred hhhhhhhhcEEEEEc-cccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcc----hHHHHHHHHHcCC--eEEEecCC
Q 046085 106 LVVKLKRVWFWVRTM-SDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSD----FVEVLQEATLRCL--KTGVAGYM 176 (230)
Q Consensus 106 La~eLrRAGv~VrtV-~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSD----F~~lLr~ARer~l--~TVVVGd~ 176 (230)
++..|+.+||.|.-+ .+.|.. .+.+.+-..+++.++|-|.... +..+++..+++|. -.|+||..
T Consensus 23 v~~~l~~~G~~Vi~lG~~~p~e-------~~v~~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~g~~~i~v~vGG~ 93 (137)
T 1ccw_A 23 LDHAFTNAGFNVVNIGVLSPQE-------LFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGGN 93 (137)
T ss_dssp HHHHHHHTTCEEEEEEEEECHH-------HHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHHTTCTTCEEEEEES
T ss_pred HHHHHHHCCCEEEECCCCCCHH-------HHHHHHHhcCCCEEEEEecCcCcHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 357899999999833 344443 2333344568888888776654 4456777888776 45677764
No 425
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=54.95 E-value=9.1 Score=33.12 Aligned_cols=63 Identities=10% Similarity=-0.154 Sum_probs=40.0
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.|+..+++..|+.+.......+. . ..+.+.++++|.|++.+.+ ..+++.+.+.|+.+|+||..
T Consensus 44 ~gi~~~a~~~g~~~~i~~~~~~~---~----~i~~l~~~~vDGiIi~~~~---~~~~~~l~~~~iPvV~i~~~ 106 (412)
T 4fe7_A 44 EGVGEYLQASQSEWDIFIEEDFR---A----RIDKIKDWLGDGVIADFDD---KQIEQALADVDVPIVGVGGS 106 (412)
T ss_dssp HHHHHHHHHHTCCEEEEECC-CC---------------CCCSEEEEETTC---HHHHHHHTTCCSCEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEecCCcc---c----hhhhHhcCCCCEEEEecCC---hHHHHHHhhCCCCEEEecCC
Confidence 46778888888877754422221 1 1334447899999985543 45778888999999999865
No 426
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=54.91 E-value=15 Score=32.28 Aligned_cols=42 Identities=14% Similarity=0.048 Sum_probs=33.3
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 145 GCLVFVSDD---SDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSDD---SDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
+.++.+|-. .|-...++.|+++|++|+.|-+..+..|.+.||
T Consensus 93 dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad 137 (344)
T 3fj1_A 93 ALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAGVSA 137 (344)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTSS
T ss_pred cEEEEEcCCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHHHhcC
Confidence 455555543 366778999999999999998776679999999
No 427
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=54.61 E-value=56 Score=24.80 Aligned_cols=75 Identities=13% Similarity=-0.092 Sum_probs=44.0
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEE---EEcCC----------cch-----HHHHHHHHHc
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLV---FVSDD----------SDF-----VEVLQEATLR 166 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclv---LVSDD----------SDF-----~~lLr~ARer 166 (230)
.+-..|+..|+.+-.||..|.. ..+.+ +...|++.++ +.++| ..+ ..+...+.+.
T Consensus 99 ~~l~~l~~~g~~~~ivS~~~~~----~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~ 171 (232)
T 3fvv_A 99 DVVRGHLAAGDLCALVTATNSF----VTAPI---ARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGM 171 (232)
T ss_dssp HHHHHHHHTTCEEEEEESSCHH----HHHHH---HHHTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEeCCCHH----HHHHH---HHHcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHc
Confidence 4566788999999999988864 22233 2234554221 22122 122 1233445556
Q ss_pred C---C---eEEEecCC-CCchhhhhhh
Q 046085 167 C---L---KTGVAGYM-NDGTLKRIAD 186 (230)
Q Consensus 167 ~---l---~TVVVGd~-~~~aL~r~AD 186 (230)
| + .+++|||+ +|-...+.|+
T Consensus 172 ~~~~~~~~~~~~vGDs~~D~~~~~~ag 198 (232)
T 3fvv_A 172 GLALGDFAESYFYSDSVNDVPLLEAVT 198 (232)
T ss_dssp TCCGGGSSEEEEEECCGGGHHHHHHSS
T ss_pred CCCcCchhheEEEeCCHhhHHHHHhCC
Confidence 6 3 58999999 6666677777
No 428
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=54.39 E-value=5.5 Score=30.36 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=17.3
Q ss_pred cccccccCCCcccCchHHHHHHHHHh
Q 046085 32 YVLVIVEGDLRLYNNDKLVNHFKQIH 57 (230)
Q Consensus 32 y~~C~VCGdrkf~t~~kL~kHFkqlH 57 (230)
|++|-.|| .+|+ .|.+|..+-|
T Consensus 21 ~iiClecG-K~fK---~LkRHL~~~h 42 (87)
T 2jsp_A 21 HIVCLECG-GSFK---SLKRHLTTHH 42 (87)
T ss_dssp CEECTBTC-CEES---BHHHHHHHTT
T ss_pred ceEecccc-hhhH---HHHHHHHHcc
Confidence 55999999 7777 4889987754
No 429
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=54.14 E-value=43 Score=28.62 Aligned_cols=82 Identities=21% Similarity=0.206 Sum_probs=51.9
Q ss_pred hhhhhhhcE--EEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEc-CCc---c-----hHHHHHHH-HHcCCeEEEec
Q 046085 107 VVKLKRVWF--WVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVS-DDS---D-----FVEVLQEA-TLRCLKTGVAG 174 (230)
Q Consensus 107 a~eLrRAGv--~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVS-DDS---D-----F~~lLr~A-Rer~l~TVVVG 174 (230)
|..|+.+|- .|-.|+-.|..++.+|+.-+ ..|+|-+++|+ |+. . ++.+|..+ ++.+...|+.|
T Consensus 46 A~~Lke~g~~~~V~av~~G~~~a~~~lr~al-----a~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G 120 (252)
T 1efp_B 46 AIRLKEKGQAEEIIAVSIGVKQAAETLRTAL-----AMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAG 120 (252)
T ss_dssp HHHHHTTTSCSEEEEEEEESGGGHHHHHHHH-----HHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHhcCCCceEEEEEeCChhHHHHHHHHH-----hcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 455655454 67777777765555655432 35999999999 652 2 34455544 34577899999
Q ss_pred CCC-----Cchhhhhhhccccccc
Q 046085 175 YMN-----DGTLKRIADRLKWAYN 193 (230)
Q Consensus 175 d~~-----~~aL~r~AD~leW~~~ 193 (230)
..+ .+...++|-.|.|-.-
T Consensus 121 ~~s~d~~~~~v~p~lA~~L~~~~v 144 (252)
T 1efp_B 121 KQAIDNDMNATGQMLAAILGWAQA 144 (252)
T ss_dssp SCCTTTCCCCHHHHHHHHHTCEEE
T ss_pred CCccCCchhhHHHHHHHHhCCCcc
Confidence 875 3356677766666443
No 430
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=53.74 E-value=50 Score=23.50 Aligned_cols=65 Identities=14% Similarity=0.061 Sum_probs=42.3
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATLR--CLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARer--~l~TVVVGd~~ 177 (230)
-.|...|.+.|+.|.++++..+| .+.+....++.+++=.+ +.+-.++++..++. .+..+++++..
T Consensus 21 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 21 NSLKRLIKRLGCNIITFTSPLDA---------LEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHHTTTCEEEEESCHHHH---------HHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHHHcCCeEEEeCCHHHH---------HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 35677788889998877765443 23344556776666433 33445678887774 67788887763
No 431
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=53.49 E-value=29 Score=26.26 Aligned_cols=73 Identities=18% Similarity=0.048 Sum_probs=0.0
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcc---eEEEEcCCcch-----HHHHHHHHHcCC----eEEEe
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFG---CLVFVSDDSDF-----VEVLQEATLRCL----KTGVA 173 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vd---clvLVSDDSDF-----~~lLr~ARer~l----~TVVV 173 (230)
+-..|+..|+.+-.++..+.. .+...+...|+. -.++.|++... ..+...++.-|+ .+++|
T Consensus 111 ~l~~l~~~g~~~~i~T~~~~~-------~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~v 183 (231)
T 3kzx_A 111 LLDTLKENNITMAIVSNKNGE-------RLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFI 183 (231)
T ss_dssp HHHHHHHTTCEEEEEEEEEHH-------HHHHHHHHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEE
T ss_pred HHHHHHHCCCeEEEEECCCHH-------HHHHHHHHCCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEE
Q ss_pred cCC-CCchhhhhh
Q 046085 174 GYM-NDGTLKRIA 185 (230)
Q Consensus 174 Gd~-~~~aL~r~A 185 (230)
||+ +|-...+.|
T Consensus 184 GD~~~Di~~a~~a 196 (231)
T 3kzx_A 184 GDSISDIQSAIEA 196 (231)
T ss_dssp ESSHHHHHHHHHT
T ss_pred cCCHHHHHHHHHC
No 432
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=53.28 E-value=34 Score=26.10 Aligned_cols=88 Identities=15% Similarity=0.037 Sum_probs=48.5
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCcc-----hHHHHHHHHHcCCe----EEEec
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDSD-----FVEVLQEATLRCLK----TGVAG 174 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDSD-----F~~lLr~ARer~l~----TVVVG 174 (230)
.+-..|+..|+.+-.++..+... .....+.+. ..-++. ++.|++.. =..+...+..-|+. +++||
T Consensus 117 ~~l~~l~~~g~~~~i~s~~~~~~----~~~~l~~~~l~~~f~~-~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vG 191 (240)
T 3sd7_A 117 EILEMLYKNGKILLVATSKPTVF----AETILRYFDIDRYFKY-IAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVG 191 (240)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHH----HHHHHHHTTCGGGCSE-EEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEE
T ss_pred HHHHHHHHCCCeEEEEeCCcHHH----HHHHHHHcCcHhhEEE-EEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEEC
Confidence 45678899999998888876531 112212210 111343 44555432 22333344445554 89999
Q ss_pred CC-CCchhhhhhh----ccccccchHHH
Q 046085 175 YM-NDGTLKRIAD----RLKWAYNSEVE 197 (230)
Q Consensus 175 d~-~~~aL~r~AD----~leW~~~~e~e 197 (230)
|+ +|-...+.|. ++.|.+....+
T Consensus 192 D~~~Di~~a~~aG~~~i~v~~g~~~~~~ 219 (240)
T 3sd7_A 192 DRKYDIIGAKKIGIDSIGVLYGYGSFEE 219 (240)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSSCCHHH
T ss_pred CCHHHHHHHHHCCCCEEEEeCCCCCHHH
Confidence 98 5444455555 56776655443
No 433
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=52.98 E-value=22 Score=28.29 Aligned_cols=66 Identities=8% Similarity=-0.059 Sum_probs=37.7
Q ss_pred CCchhhhhhhhcEEEEEccccchHHHHHHH-----------HHHHHHHhhcCcceEEEEcCCcchH-HHHHHHHHcCCe
Q 046085 103 GYSLVVKLKRVWFWVRTMSDKLQAADVLLR-----------NYMVDMMDKRRFGCLVFVSDDSDFV-EVLQEATLRCLK 169 (230)
Q Consensus 103 gygLa~eLrRAGv~VrtV~dKpqAAD~AL~-----------~~m~~~m~~r~vdclvLVSDDSDF~-~lLr~ARer~l~ 169 (230)
|..++..|...|+ |..+...|...+.+.. ...+....=.+++.++..++|..-. -++..|++.+..
T Consensus 21 G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~ 98 (234)
T 2aef_A 21 TLECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDES 98 (234)
T ss_dssp HHHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCC
Confidence 4457889999999 8877776765443220 0111111113567777766654332 344677887764
No 434
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=52.81 E-value=36 Score=28.62 Aligned_cols=63 Identities=17% Similarity=0.240 Sum_probs=52.8
Q ss_pred chhhhhhh-hcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC-------CcchHHHHHHHHHcCCeEE
Q 046085 105 SLVVKLKR-VWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD-------DSDFVEVLQEATLRCLKTG 171 (230)
Q Consensus 105 gLa~eLrR-AGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD-------DSDF~~lLr~ARer~l~TV 171 (230)
|=|.-|++ +|+.|..|...|.--| -++.++|.+..|+.++...| +.|=..|.|.|-+.|+-.+
T Consensus 63 gTa~~L~e~~Gl~v~~v~k~~eGG~----pqI~d~I~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~~~~IP~~ 133 (178)
T 1vmd_A 63 TTGALLQEKLGLKVHRLKSGPLGGD----QQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALIRIATVYNIPVA 133 (178)
T ss_dssp HHHHHHHHHHCCCCEECSCGGGTHH----HHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCceeEEEeecCCCCC----chHHHHHHCCCccEEEEccCccCCCcccccHHHHHHHHHHcCCCEE
Confidence 55788999 9999999987777444 37889998888999999998 6788889999999988765
No 435
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=52.62 E-value=69 Score=25.94 Aligned_cols=68 Identities=10% Similarity=0.071 Sum_probs=45.3
Q ss_pred cEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCCCchhhh
Q 046085 114 WFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMNDGTLKR 183 (230)
Q Consensus 114 Gv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~~~aL~r 183 (230)
-+.|-.|.+.+. .......+.+.+...|++.-..|...+-...|++.|++.+...+|+|-...+.+.+
T Consensus 200 ~l~ll~v~~~~~--~~~~l~~~~~~l~~~~~~~~~~~~~g~~~~~I~~~a~~~~~dLlV~G~~~~~~~~~ 267 (294)
T 3loq_A 200 ELHIIHVSEDGD--KTADLRVMEEVIGAEGIEVHVHIESGTPHKAILAKREEINATTIFMGSRGAGSVMT 267 (294)
T ss_dssp EEEEEEECSSSC--CHHHHHHHHHHHHHTTCCEEEEEECSCHHHHHHHHHHHTTCSEEEEECCCCSCHHH
T ss_pred EEEEEEEccCch--HHHHHHHHHHHHHHcCCcEEEEEecCCHHHHHHHHHHhcCcCEEEEeCCCCCCccc
Confidence 355555655544 22344556666666787765556566677889999999999999999875444443
No 436
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=52.39 E-value=21 Score=25.56 Aligned_cols=65 Identities=11% Similarity=0.010 Sum_probs=40.7
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATLR--CLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARer--~l~TVVVGd~~ 177 (230)
-.|...|.+.|+.|.++++..+| .+.+.....+.+++=.+ +.+=.++++..++. ++..|++++..
T Consensus 17 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ls~~~ 85 (155)
T 1qkk_A 17 KAMQQTLELAGFTVSSFASATEA---------LAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILVTGHG 85 (155)
T ss_dssp HHHHHHHHHTTCEEEEESCHHHH---------HHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEEECGG
T ss_pred HHHHHHHHHcCcEEEEECCHHHH---------HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEEECCC
Confidence 35677788889998877664333 23344455676665433 23344667777764 67788887763
No 437
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=52.20 E-value=29 Score=31.96 Aligned_cols=40 Identities=8% Similarity=0.034 Sum_probs=26.1
Q ss_pred HHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEE-ecC
Q 046085 135 MVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGV-AGY 175 (230)
Q Consensus 135 m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVV-VGd 175 (230)
+...|.+.|+.+.+-..+.| |...++.|.+.|.+.+| ||+
T Consensus 380 la~~LR~~Gi~ve~~~~~~s-lkkq~k~A~k~ga~~vviiGe 420 (456)
T 3lc0_A 380 VLRRLRDAGRSADIILDKKK-VVQAFNYADRVGAVRAVLVAP 420 (456)
T ss_dssp HHHHHHHTTCCEEECCSCCC-HHHHHHHHHHTTEEEEEEECH
T ss_pred HHHHHHHCCCeEEEecCCCC-HHHHHHHHHHcCCCEEEEECC
Confidence 34455566777655544443 88888888888887654 555
No 438
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=52.18 E-value=56 Score=22.66 Aligned_cols=64 Identities=19% Similarity=0.173 Sum_probs=42.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHH----cCCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATL----RCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARe----r~l~TVVVGd~ 176 (230)
..|...|.+.|+.|.++++..+| .+.+.....|.+++=.. +.+-.++++..|+ ..+..+++.+.
T Consensus 20 ~~l~~~l~~~g~~v~~~~~~~~a---------~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~ 89 (140)
T 3grc_A 20 RLLNLMLEKGGFDSDMVHSAAQA---------LEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSAN 89 (140)
T ss_dssp HHHHHHHHHTTCEEEEECSHHHH---------HHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECTT
T ss_pred HHHHHHHHHCCCeEEEECCHHHH---------HHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEecC
Confidence 45777888899999888765444 22344566777666332 3445567787776 46788888876
No 439
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=51.98 E-value=30 Score=33.46 Aligned_cols=71 Identities=14% Similarity=0.049 Sum_probs=44.8
Q ss_pred hhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC-CCchhhhhhh
Q 046085 108 VKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM-NDGTLKRIAD 186 (230)
Q Consensus 108 ~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~-~~~aL~r~AD 186 (230)
..|+++|+.|-.++..+..+=.+ +....|++.++.=....+=..+++..++. -.++.|||+ ||-.--+.||
T Consensus 545 ~~l~~~Gi~v~~~TGd~~~~a~~-------ia~~lgi~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~ 616 (723)
T 3j09_A 545 QELKRMGIKVGMITGDNWRSAEA-------ISRELNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQAD 616 (723)
T ss_dssp HHHHHTTCEEEEECSSCHHHHHH-------HHHHHTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSS
T ss_pred HHHHHCCCEEEEECCCCHHHHHH-------HHHHcCCcEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCC
Confidence 46778888888777766532112 22234666555444455667777777776 678889999 7655445566
No 440
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=51.77 E-value=6.5 Score=25.77 Aligned_cols=24 Identities=13% Similarity=0.223 Sum_probs=21.4
Q ss_pred cccccCCCcccCchHHHHHHHHHhH
Q 046085 34 LVIVEGDLRLYNNDKLVNHFKQIHK 58 (230)
Q Consensus 34 ~C~VCGdrkf~t~~kL~kHFkqlHe 58 (230)
-|+.|- .|...-.+|++|.+.-|.
T Consensus 11 hcrfck-kkysdvknlikhire~hd 34 (37)
T 2elu_A 11 HCRFCK-KKYSDVKNLIKHIRDAHD 34 (37)
T ss_dssp EETTTT-EECSSHHHHHHHHHHTTC
T ss_pred HHHHHH-HHHHHHHHHHHHHHHhcC
Confidence 699999 898999999999998774
No 441
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=51.46 E-value=16 Score=27.08 Aligned_cols=28 Identities=21% Similarity=0.031 Sum_probs=21.4
Q ss_pred CCchhhhhhhhcEEEEEccccchHHHHH
Q 046085 103 GYSLVVKLKRVWFWVRTMSDKLQAADVL 130 (230)
Q Consensus 103 gygLa~eLrRAGv~VrtV~dKpqAAD~A 130 (230)
|..+|..|++.|+.|..+...|...+.+
T Consensus 19 G~~la~~L~~~g~~v~vid~~~~~~~~~ 46 (140)
T 3fwz_A 19 GSLLGEKLLASDIPLVVIETSRTRVDEL 46 (140)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHH
Confidence 4557889999999999888777765543
No 442
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=51.28 E-value=9.2 Score=29.69 Aligned_cols=73 Identities=21% Similarity=0.213 Sum_probs=48.9
Q ss_pred cCCchhhhhhhhcEEEEEccccchH-----------HHHHH-HHHHHHHHhhcCcceEEEEcCCcc----------hHHH
Q 046085 102 VGYSLVVKLKRVWFWVRTMSDKLQA-----------ADVLL-RNYMVDMMDKRRFGCLVFVSDDSD----------FVEV 159 (230)
Q Consensus 102 vgygLa~eLrRAGv~VrtV~dKpqA-----------AD~AL-~~~m~~~m~~r~vdclvLVSDDSD----------F~~l 159 (230)
+|..|+.+|.+.|+.|..+...|.. .|..= ...+.+++ .++|.|+....... -..+
T Consensus 12 iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--~~~d~vi~~ag~~~~~~~~~n~~~~~~l 89 (219)
T 3dqp_A 12 VGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQL--HGMDAIINVSGSGGKSLLKVDLYGAVKL 89 (219)
T ss_dssp HHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTT--TTCSEEEECCCCTTSSCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHH--cCCCEEEECCcCCCCCcEeEeHHHHHHH
Confidence 4677889999999998877666542 23333 34444555 37999988765442 3568
Q ss_pred HHHHHHcCCeEEE-ecCC
Q 046085 160 LQEATLRCLKTGV-AGYM 176 (230)
Q Consensus 160 Lr~ARer~l~TVV-VGd~ 176 (230)
++.|++.|++.+| +|..
T Consensus 90 ~~a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 90 MQAAEKAEVKRFILLSTI 107 (219)
T ss_dssp HHHHHHTTCCEEEEECCT
T ss_pred HHHHHHhCCCEEEEECcc
Confidence 8889999986555 5543
No 443
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=51.14 E-value=27 Score=28.53 Aligned_cols=67 Identities=7% Similarity=0.004 Sum_probs=39.2
Q ss_pred CchhhhhhhhcE----EEEE--ccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 104 YSLVVKLKRVWF----WVRT--MSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv----~Vrt--V~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
-|+..+|+..|+ .|.. ....-+. .....+.+.|.++++|.|++++++. ...+.. ...++-+|.+|..
T Consensus 27 ~gi~~~l~~~Gy~~g~~v~l~~~~~~~~~---~~~~~~~~~l~~~~vDgII~~~~~~-~~~~~~--~~~~iPvV~~~~~ 99 (302)
T 2qh8_A 27 QGLLDGLKAKGYEEGKNLEFDYKTAQGNP---AIAVQIARQFVGENPDVLVGIATPT-AQALVS--ATKTIPIVFTAVT 99 (302)
T ss_dssp HHHHHHHHHTTCCBTTTEEEEEEECTTCH---HHHHHHHHHHHHTCCSEEEEESHHH-HHHHHH--HCSSSCEEEEEES
T ss_pred HHHHHHHHHcCCCCCCceEEEEecCCCCH---HHHHHHHHHHHhCCCCEEEECChHH-HHHHHh--cCCCcCEEEEecC
Confidence 367888999998 4432 2222221 2223334445578999998876432 222332 2678999988743
No 444
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=51.12 E-value=23 Score=28.89 Aligned_cols=63 Identities=19% Similarity=0.232 Sum_probs=50.9
Q ss_pred chhhhhhh-hcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC-------CcchHHHHHHHHHcCCeEE
Q 046085 105 SLVVKLKR-VWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD-------DSDFVEVLQEATLRCLKTG 171 (230)
Q Consensus 105 gLa~eLrR-AGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD-------DSDF~~lLr~ARer~l~TV 171 (230)
|=+.-|++ +|+.|..|...|.--| -++.++|.+..|+.++...| +.|=..+.|.|-+.|+-..
T Consensus 47 gTa~~L~e~~Gl~v~~v~k~~eGG~----p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~ 117 (152)
T 1b93_A 47 TTGNLISRATGMNVNAMLSGPMGGD----QQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVA 117 (152)
T ss_dssp THHHHHHHHHCCCCEEECCGGGTHH----HHHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCceeEEEEecCCCCC----chHHHHHHCCCccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEE
Confidence 55788999 9999999987777444 37889998888999999998 4466778888888887654
No 445
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=50.90 E-value=27 Score=24.87 Aligned_cols=48 Identities=6% Similarity=-0.119 Sum_probs=31.4
Q ss_pred HHHHHHhhcCc-ceEEEEcCCcchHHHHH-HHHHcCCeEEEecCCCCchh
Q 046085 134 YMVDMMDKRRF-GCLVFVSDDSDFVEVLQ-EATLRCLKTGVAGYMNDGTL 181 (230)
Q Consensus 134 ~m~~~m~~r~v-dclvLVSDDSDF~~lLr-~ARer~l~TVVVGd~~~~aL 181 (230)
.+.+.+...|+ .+-..|...+-...+++ .|++.+...+|+|-...+.+
T Consensus 73 ~~~~~~~~~g~~~~~~~~~~g~~~~~I~~~~a~~~~~dliV~G~~~~~~~ 122 (146)
T 3s3t_A 73 QRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGATGTNSP 122 (146)
T ss_dssp HHHHHHTTSSCCCCEEEEEEECHHHHHHHHHHHSTTCCEEEEESCCSSCT
T ss_pred HHHHHHHhcCCcceEEEEecCChHHHHHHHHHhhcCCCEEEECCCCCCCc
Confidence 33444445566 44444444456678889 89999999999997643333
No 446
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=50.73 E-value=7.1 Score=28.40 Aligned_cols=32 Identities=16% Similarity=0.167 Sum_probs=24.9
Q ss_pred CcccccccCCCccc---CchHHHHHHHHHhHHHHHH
Q 046085 31 PYVLVIVEGDLRLY---NNDKLVNHFKQIHKREQKK 63 (230)
Q Consensus 31 py~~C~VCGdrkf~---t~~kL~kHFkqlHeREr~K 63 (230)
..+.|..|+ ..+. +-..|.+|.+..|..|-.+
T Consensus 28 ~~a~Ck~C~-~~l~~~g~TSnL~rHL~~~H~~e~~~ 62 (73)
T 2ct5_A 28 KKIYCRICM-AQIAYSGNTSNLSYHLEKNHPEEFCE 62 (73)
T ss_dssp SCCEETTTT-EECCCCSSTHHHHHHHHHSCHHHHHH
T ss_pred CEEECCCCC-ccccCCCChHhHHHHHHHHCHHHHHH
Confidence 345899999 7543 5578999999999887665
No 447
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=50.73 E-value=43 Score=25.48 Aligned_cols=83 Identities=14% Similarity=0.136 Sum_probs=45.8
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcC---CcchHHHHHHHHHcCC---eEEEecCC-C
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSD---DSDFVEVLQEATLRCL---KTGVAGYM-N 177 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSD---DSDF~~lLr~ARer~l---~TVVVGd~-~ 177 (230)
+-..|+. |+.+-.++.+|... ....++.+. ..-++.++ .|+ -++=..++..++.-|+ .+++|||+ +
T Consensus 92 ~l~~L~~-~~~l~i~T~~~~~~----~~~~l~~~gl~~~f~~i~-~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~ 165 (210)
T 2ah5_A 92 LLEELSS-SYPLYITTTKDTST----AQDMAKNLEIHHFFDGIY-GSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKF 165 (210)
T ss_dssp HHHHHHT-TSCEEEEEEEEHHH----HHHHHHHTTCGGGCSEEE-EECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHH
T ss_pred HHHHHHc-CCeEEEEeCCCHHH----HHHHHHhcCchhheeeee-cCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHH
Confidence 4456777 98888888888742 111222110 11245543 444 2333344455555676 48999998 4
Q ss_pred Cchhhhhhh----ccccccch
Q 046085 178 DGTLKRIAD----RLKWAYNS 194 (230)
Q Consensus 178 ~~aL~r~AD----~leW~~~~ 194 (230)
+-.-.+.|- ++.|.+..
T Consensus 166 Di~~a~~aG~~~i~v~~~~~~ 186 (210)
T 2ah5_A 166 DMLGARETGIQKLAITWGFGE 186 (210)
T ss_dssp HHHHHHHHTCEEEEESSSSSC
T ss_pred HHHHHHHCCCcEEEEcCCCCC
Confidence 333345555 67887653
No 448
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=50.56 E-value=57 Score=22.23 Aligned_cols=84 Identities=11% Similarity=0.065 Sum_probs=51.9
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHHc----CCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATLR----CLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARer----~l~TVVVGd~~ 177 (230)
..|...|.+.|+.|.++++..+| .+.+.+..++.+++=.+ +.+-.++++..|+. ++..+++.+..
T Consensus 17 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~ 87 (127)
T 3i42_A 17 ETFKELLEMLGFQADYVMSGTDA---------LHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFA 87 (127)
T ss_dssp HHHHHHHHHTTEEEEEESSHHHH---------HHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-
T ss_pred HHHHHHHHHcCCCEEEECCHHHH---------HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCc
Confidence 45778889999999987765444 23344466787766443 44556788888875 56777777663
Q ss_pred Cc----hhhhhhh-ccccccchHH
Q 046085 178 DG----TLKRIAD-RLKWAYNSEV 196 (230)
Q Consensus 178 ~~----aL~r~AD-~leW~~~~e~ 196 (230)
+. ++..-|| +|.--+.+++
T Consensus 88 ~~~~~~~~~~g~~~~l~KP~~~~~ 111 (127)
T 3i42_A 88 KNDLGKEACELFDFYLEKPIDIAS 111 (127)
T ss_dssp CTTCCHHHHHHCSEEEESSCCHHH
T ss_pred chhHHHHHHHhhHHheeCCCCHHH
Confidence 22 2333333 6655555544
No 449
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=50.38 E-value=63 Score=22.67 Aligned_cols=72 Identities=10% Similarity=0.031 Sum_probs=38.4
Q ss_pred CCchhhhhhhhcEEEEEccccchHHHHHHHH-HH---------HHHHh---hcCcceEEEEcCCcchHH-HHHHHHHcCC
Q 046085 103 GYSLVVKLKRVWFWVRTMSDKLQAADVLLRN-YM---------VDMMD---KRRFGCLVFVSDDSDFVE-VLQEATLRCL 168 (230)
Q Consensus 103 gygLa~eLrRAGv~VrtV~dKpqAAD~AL~~-~m---------~~~m~---~r~vdclvLVSDDSDF~~-lLr~ARer~l 168 (230)
|..++..|.+.|+.|..+...|+.++..... .+ .+.+. -.++|.+++.+.+..... ++..|+..+.
T Consensus 16 G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 95 (140)
T 1lss_A 16 GYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGI 95 (140)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcCC
Confidence 4456778888888887665555544322111 00 01111 135677766665543332 4566777776
Q ss_pred eEEEec
Q 046085 169 KTGVAG 174 (230)
Q Consensus 169 ~TVVVG 174 (230)
..+|+-
T Consensus 96 ~~ii~~ 101 (140)
T 1lss_A 96 NKTIAR 101 (140)
T ss_dssp CCEEEE
T ss_pred CEEEEE
Confidence 666553
No 450
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=50.01 E-value=60 Score=22.34 Aligned_cols=84 Identities=8% Similarity=-0.041 Sum_probs=50.4
Q ss_pred Cchhhhhhh-hcEE-EEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHH----cCCeEEEecC
Q 046085 104 YSLVVKLKR-VWFW-VRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATL----RCLKTGVAGY 175 (230)
Q Consensus 104 ygLa~eLrR-AGv~-VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARe----r~l~TVVVGd 175 (230)
-.|...|.+ .|+. |.++++..+|. +.+.+...+.+++=.+ +.+-.++++..++ .++..+++++
T Consensus 22 ~~l~~~L~~~~~~~~v~~~~~~~~a~---------~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 92 (143)
T 3cnb_A 22 DMLTQFLENLFPYAKIKIAYNPFDAG---------DLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVIAMTG 92 (143)
T ss_dssp HHHHHHHHHHCTTCEEEEECSHHHHH---------HHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEEEEES
T ss_pred HHHHHHHHhccCccEEEEECCHHHHH---------HHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCCcEEEEeC
Confidence 456777888 8998 88777755542 2333456776666443 3345577888887 4577888877
Q ss_pred CCCchh-----hhhhh-ccccccchHH
Q 046085 176 MNDGTL-----KRIAD-RLKWAYNSEV 196 (230)
Q Consensus 176 ~~~~aL-----~r~AD-~leW~~~~e~ 196 (230)
..+... ..-|+ +|.--+++++
T Consensus 93 ~~~~~~~~~~~~~g~~~~l~kP~~~~~ 119 (143)
T 3cnb_A 93 ALTDDNVSRIVALGAETCFGKPLNFTL 119 (143)
T ss_dssp SCCHHHHHHHHHTTCSEEEESSCCHHH
T ss_pred CCCHHHHHHHHhcCCcEEEeCCCCHHH
Confidence 643221 11222 6665555554
No 451
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=49.98 E-value=8 Score=31.19 Aligned_cols=69 Identities=10% Similarity=0.083 Sum_probs=40.2
Q ss_pred CCchhhhhhhh-cEEEEEccccchH-------------HHHHHHHHHHHHHhhcCcceEEEEcCCcc--------hHHHH
Q 046085 103 GYSLVVKLKRV-WFWVRTMSDKLQA-------------ADVLLRNYMVDMMDKRRFGCLVFVSDDSD--------FVEVL 160 (230)
Q Consensus 103 gygLa~eLrRA-Gv~VrtV~dKpqA-------------AD~AL~~~m~~~m~~r~vdclvLVSDDSD--------F~~lL 160 (230)
|-.++..|.+. |..|..+...|.. +|+.=...+..++ .++|.|+....... ...++
T Consensus 13 G~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~--~~~d~vi~~a~~~~~~~~~~~~~~~l~ 90 (289)
T 3e48_A 13 GTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAF--KGMDTVVFIPSIIHPSFKRIPEVENLV 90 (289)
T ss_dssp HHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHT--TTCSEEEECCCCCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHH--hCCCEEEEeCCCCccchhhHHHHHHHH
Confidence 44566666665 6666655444431 1222223333445 48899988876532 24678
Q ss_pred HHHHHcCCeEEEe
Q 046085 161 QEATLRCLKTGVA 173 (230)
Q Consensus 161 r~ARer~l~TVVV 173 (230)
+.|++.|++.+|.
T Consensus 91 ~aa~~~gv~~iv~ 103 (289)
T 3e48_A 91 YAAKQSGVAHIIF 103 (289)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHcCCCEEEE
Confidence 8888888865554
No 452
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=49.98 E-value=23 Score=29.04 Aligned_cols=45 Identities=9% Similarity=0.107 Sum_probs=34.1
Q ss_pred cCcceEEEEcCCcc---hHHHHHHHHHcCCeEEEecC-C-CCchhhhhhh
Q 046085 142 RRFGCLVFVSDDSD---FVEVLQEATLRCLKTGVAGY-M-NDGTLKRIAD 186 (230)
Q Consensus 142 r~vdclvLVSDDSD---F~~lLr~ARer~l~TVVVGd-~-~~~aL~r~AD 186 (230)
..-|+++++|.... =.++...|+++|+.+|.|-. . +...-++++|
T Consensus 76 ~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs~~~~~~~~~~L~d 125 (170)
T 3jx9_A 76 HAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITLGDVTETLERSIAP 125 (170)
T ss_dssp CTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEESSCCCTTGGGSSSC
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeCcchhccccCcHHH
Confidence 35699999997655 77899999999999999998 3 2222246666
No 453
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=49.93 E-value=60 Score=22.33 Aligned_cols=65 Identities=14% Similarity=-0.024 Sum_probs=40.6
Q ss_pred CchhhhhhhhcEEEEE-ccccchHHHHHHHHHHHHHHhhcCcceEEEEcC---CcchHHHHHHHHH-cCCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRT-MSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD---DSDFVEVLQEATL-RCLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~Vrt-V~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD---DSDF~~lLr~ARe-r~l~TVVVGd~~ 177 (230)
-.|...|.+.|+.|.. +++..+| + +.+.....+.+++=.+ +.+-.++++..++ .++..|++++..
T Consensus 23 ~~l~~~L~~~g~~v~~~~~~~~~a----~-----~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~~ 92 (140)
T 3cg0_A 23 ATLRIQLESLGYDVLGVFDNGEEA----V-----RCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSSQ 92 (140)
T ss_dssp HHHHHHHHHHTCEEEEEESSHHHH----H-----HHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECCC
T ss_pred HHHHHHHHHCCCeeEEEECCHHHH----H-----HHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 4577788888999984 6554443 2 2233345776666432 3344566777666 578888888764
No 454
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=49.53 E-value=49 Score=25.40 Aligned_cols=82 Identities=20% Similarity=0.203 Sum_probs=0.0
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcc---eEEEEcCC-----cchHHHHHHHHHcCCe---EEEec
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFG---CLVFVSDD-----SDFVEVLQEATLRCLK---TGVAG 174 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vd---clvLVSDD-----SDF~~lLr~ARer~l~---TVVVG 174 (230)
+-..|+..|+.+-.+|..+.. .+...+...|+. -.++.|++ ++=..+...++..|+. +++||
T Consensus 91 ~l~~l~~~g~~~~i~s~~~~~-------~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vG 163 (222)
T 2nyv_A 91 TLEALKSKGFKLAVVSNKLEE-------LSKKILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVG 163 (222)
T ss_dssp HHHHHHHTTCEEEEECSSCHH-------HHHHHHHHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHHCCCeEEEEcCCCHH-------HHHHHHHHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCchhEEEEC
Q ss_pred CC-CCchhhhhhh----ccccccch
Q 046085 175 YM-NDGTLKRIAD----RLKWAYNS 194 (230)
Q Consensus 175 d~-~~~aL~r~AD----~leW~~~~ 194 (230)
|+ +|-...+.|. ++.|.+.+
T Consensus 164 D~~~Di~~a~~aG~~~i~v~~g~~~ 188 (222)
T 2nyv_A 164 DTDADIEAGKRAGTKTALALWGYVK 188 (222)
T ss_dssp SSHHHHHHHHHHTCEEEEETTSSCS
T ss_pred CCHHHHHHHHHCCCeEEEEcCCCCC
No 455
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=49.52 E-value=18 Score=31.88 Aligned_cols=78 Identities=15% Similarity=0.030 Sum_probs=48.2
Q ss_pred hhhhhhhhc-EEEEEccccchHHHHHHHHHHHHHHhhcCcceEEE--EcCCc---chHHHHHHHHHcCCeEEE-ecCCCC
Q 046085 106 LVVKLKRVW-FWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVF--VSDDS---DFVEVLQEATLRCLKTGV-AGYMND 178 (230)
Q Consensus 106 La~eLrRAG-v~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvL--VSDDS---DF~~lLr~ARer~l~TVV-VGd~~~ 178 (230)
|..+|++-| =.|=.|.|+ .....-+...+.+.+.+.|+++.++ |..++ ....+++.+++.+...|| ||.++-
T Consensus 22 l~~~l~~~g~~~~livtd~-~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv 100 (386)
T 1rrm_A 22 LTDEVKRRGYQKALIVTDK-TLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSP 100 (386)
T ss_dssp HHHHHHHHTCCEEEEECBH-HHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHH
T ss_pred HHHHHHHcCCCEEEEEECc-chhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHH
Confidence 345566656 234456664 4333346788888887778887655 33344 455667778888987777 787743
Q ss_pred chhhhh
Q 046085 179 GTLKRI 184 (230)
Q Consensus 179 ~aL~r~ 184 (230)
..+.+.
T Consensus 101 ~D~aK~ 106 (386)
T 1rrm_A 101 QDTCKA 106 (386)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 334333
No 456
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=49.46 E-value=12 Score=28.87 Aligned_cols=34 Identities=15% Similarity=0.189 Sum_probs=0.0
Q ss_pred HhcCccCCCCCcccccccCCCcccCchHHHHHHH-HHhHH
Q 046085 21 EIKGVIRPAEPYVLVIVEGDLRLYNNDKLVNHFK-QIHKR 59 (230)
Q Consensus 21 e~~g~i~p~epy~~C~VCGdrkf~t~~kL~kHFk-qlHeR 59 (230)
|...+.+| + .|.+|+ -.|.+...+..|++ ..|.+
T Consensus 25 e~~~~~~~---~-~C~~C~-v~~~S~s~~~~H~~gkkH~~ 59 (127)
T 1zu1_A 25 ENSHIFSD---T-QCKVCS-AVLISESQKLAHYQSRKHAN 59 (127)
T ss_dssp HTTTTBCS---S-EETTTT-EECCSHHHHHHHHHCHHHHH
T ss_pred cccccCCC---C-cCcCCC-CEeCCHHHHHHHHCcHHHHH
No 457
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=49.44 E-value=2 Score=34.92 Aligned_cols=73 Identities=11% Similarity=0.005 Sum_probs=43.4
Q ss_pred CchhhhhhhhcEEEE------EccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHH------cCCeEE
Q 046085 104 YSLVVKLKRVWFWVR------TMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATL------RCLKTG 171 (230)
Q Consensus 104 ygLa~eLrRAGv~Vr------tV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARe------r~l~TV 171 (230)
..|+..|+.+|+.|. |++...... .+ .+.+....+|++++ ++-|-+..++..+.. .+.+.+
T Consensus 133 ~~l~~~L~~~G~~v~~~~~Y~~~~~~~~~~--~~----~~~l~~~~~d~v~f-tS~s~v~~~~~~~~~~~~~~l~~~~~~ 205 (240)
T 3mw8_A 133 EAMADGLRLRGANVSYLEVYQRACPPLDAP--AS----VSRWQSFGIDTIVV-TSGEVLENLINLVPKDSFAWLRDCHII 205 (240)
T ss_dssp CHHHHHHHHTTCEEEEEEEEEEECCCCCHH--HH----HHHHHHHTCCEEEC-CSHHHHHHHHHHSCGGGHHHHHHSEEE
T ss_pred HHHHHHHHHCCCEEEEEEEEEeeCCCCCHH--HH----HHHHHhCCCCEEEE-cCHHHHHHHHHHcchHHHHHHhCCCEE
Confidence 448899999998886 333332221 12 22233457887655 555666666665432 467788
Q ss_pred EecCCCCchhhh
Q 046085 172 VAGYMNDGTLKR 183 (230)
Q Consensus 172 VVGd~~~~aL~r 183 (230)
+||..+-.++..
T Consensus 206 aiG~~ta~~l~~ 217 (240)
T 3mw8_A 206 VPSARVETQARK 217 (240)
T ss_dssp ESSHHHHHHHHH
T ss_pred EECHHHHHHHHH
Confidence 888875444443
No 458
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=49.25 E-value=43 Score=25.48 Aligned_cols=21 Identities=14% Similarity=-0.026 Sum_probs=14.1
Q ss_pred hhhhhhhhcEEEEEccccchH
Q 046085 106 LVVKLKRVWFWVRTMSDKLQA 126 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqA 126 (230)
+-..|++.|+.+-.+|..|..
T Consensus 43 ~l~~L~~~G~~~~i~Tg~~~~ 63 (180)
T 1k1e_A 43 GIKMLMDADIQVAVLSGRDSP 63 (180)
T ss_dssp HHHHHHHTTCEEEEEESCCCH
T ss_pred HHHHHHHCCCeEEEEeCCCcH
Confidence 345677777777777777653
No 459
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=49.18 E-value=10 Score=29.74 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=25.6
Q ss_pred cceEEEEcCCc-----chHHHHHHHHHcCCeEEEecCC
Q 046085 144 FGCLVFVSDDS-----DFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 144 vdclvLVSDDS-----DF~~lLr~ARer~l~TVVVGd~ 176 (230)
...+||+||-. +...+++.+++.|++.++||-+
T Consensus 110 ~~~iillTDG~~~~~~~~~~~~~~~~~~gi~i~~igig 147 (213)
T 1pt6_A 110 KKVMVIVTDGESHDNHRLKKVIQDCEDENIQRFSIAIL 147 (213)
T ss_dssp EEEEEEEESSCCSCSHHHHHHHHHHHHTTEEEEEEEEC
T ss_pred CeEEEEEcCCCCCCCccHHHHHHHHHHCCCEEEEEEec
Confidence 45789999732 3567889999999998888865
No 460
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=49.01 E-value=44 Score=24.91 Aligned_cols=47 Identities=17% Similarity=0.157 Sum_probs=30.2
Q ss_pred HHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCCCchh
Q 046085 135 MVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMNDGTL 181 (230)
Q Consensus 135 m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~~~aL 181 (230)
+.+.+...|+.+-+.|...+-...|++.|++.+...||+|-...+.+
T Consensus 92 ~~~~~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~g~~~~ 138 (175)
T 2gm3_A 92 FVNKCHEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRF 138 (175)
T ss_dssp HHHHHHHHTCEEEEEEEESCHHHHHHHHHHHHCCSEEEEEECCCC--
T ss_pred HHHHHHHCCCceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCCCChh
Confidence 33334345665544343345578899999999999999997643343
No 461
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=48.99 E-value=66 Score=25.56 Aligned_cols=56 Identities=7% Similarity=-0.027 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhhcCcceEEEEc----CCcchHHHHHHHHHcCCeEEEecCCCCchhhhhhh
Q 046085 130 LLRNYMVDMMDKRRFGCLVFVS----DDSDFVEVLQEATLRCLKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 130 AL~~~m~~~m~~r~vdclvLVS----DDSDF~~lLr~ARer~l~TVVVGd~~~~aL~r~AD 186 (230)
+-...+.+.+...|+...++-+ +..+|...++.|.+-|.++|++.-+ ...++++++
T Consensus 63 ~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~-~~~~~~l~~ 122 (262)
T 3p6l_A 63 QTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA-LSDWDLVEK 122 (262)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCC-GGGHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCC-HHHHHHHHH
Confidence 3445566667778887665543 3567999999999999999999754 456777776
No 462
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=48.69 E-value=30 Score=28.93 Aligned_cols=59 Identities=20% Similarity=0.172 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHhhcCcceEEEEcCCcc----hHHHHHHHHHcCCeEEEecCCCCchhhhh
Q 046085 126 AADVLLRNYMVDMMDKRRFGCLVFVSDDSD----FVEVLQEATLRCLKTGVAGYMNDGTLKRI 184 (230)
Q Consensus 126 AAD~AL~~~m~~~m~~r~vdclvLVSDDSD----F~~lLr~ARer~l~TVVVGd~~~~aL~r~ 184 (230)
..|+...+.+...+...|+.+=+=|.+=.. +..+++.++++|++.+|+|-+-..+|.-.
T Consensus 15 ~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv 77 (166)
T 3oow_A 15 KSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGM 77 (166)
T ss_dssp GGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHH
T ss_pred HHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHH
Confidence 678899999999999999999999988877 77777777889999998887744555543
No 463
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=48.40 E-value=71 Score=22.74 Aligned_cols=84 Identities=12% Similarity=0.035 Sum_probs=51.1
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEecCCCCc
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATLR--CLKTGVAGYMNDG 179 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARer--~l~TVVVGd~~~~ 179 (230)
-.|...|.+.|+.|.++++..+|- +.+....++.+++=.+ +.+-.++++..|+. ....+++....+.
T Consensus 28 ~~l~~~L~~~g~~v~~~~~~~~a~---------~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~~~~ 98 (153)
T 3hv2_A 28 QRLQQLLSPLPYTLHFARDATQAL---------QLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTGDPDL 98 (153)
T ss_dssp HHHHHHHTTSSCEEEEESSHHHHH---------HHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECCCCCH
T ss_pred HHHHHHhcccCcEEEEECCHHHHH---------HHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEECCCCH
Confidence 356777888899998877655542 2233456776666432 34455677777774 6777888776432
Q ss_pred h-----hhhh-hh-ccccccchHH
Q 046085 180 T-----LKRI-AD-RLKWAYNSEV 196 (230)
Q Consensus 180 a-----L~r~-AD-~leW~~~~e~ 196 (230)
. +..- || +|.--+.+++
T Consensus 99 ~~~~~~~~~g~~~~~l~KP~~~~~ 122 (153)
T 3hv2_A 99 KLIAKAINEGEIYRYLSKPWDDQE 122 (153)
T ss_dssp HHHHHHHHTTCCSEEECSSCCHHH
T ss_pred HHHHHHHhCCCcceEEeCCCCHHH
Confidence 2 2222 33 6766666554
No 464
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=48.37 E-value=45 Score=27.52 Aligned_cols=29 Identities=21% Similarity=0.092 Sum_probs=21.8
Q ss_pred hcCCccC-CchhhhhhhhcEEEEEccccch
Q 046085 97 TLTPKVG-YSLVVKLKRVWFWVRTMSDKLQ 125 (230)
Q Consensus 97 vl~pkvg-ygLa~eLrRAGv~VrtV~dKpq 125 (230)
-+.++-| -.+...|+++|+.|..+|+.-.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~ 168 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIG 168 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcH
Confidence 3455555 4677889999999999998654
No 465
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=48.26 E-value=33 Score=29.21 Aligned_cols=58 Identities=22% Similarity=0.184 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHhhcCcceEEEEcCCcc----hHHHHHHHHHcCCeEEEecCCCCchhhh
Q 046085 126 AADVLLRNYMVDMMDKRRFGCLVFVSDDSD----FVEVLQEATLRCLKTGVAGYMNDGTLKR 183 (230)
Q Consensus 126 AAD~AL~~~m~~~m~~r~vdclvLVSDDSD----F~~lLr~ARer~l~TVVVGd~~~~aL~r 183 (230)
..|+...+.+.++++..||++=+-|.+-.. +.++++.|.++|++.++.|-+-...|--
T Consensus 32 ~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpG 93 (181)
T 4b4k_A 32 TSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPG 93 (181)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHH
T ss_pred HhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEeccccccchh
Confidence 689999999999999999999888887766 5566677778999999998773344443
No 466
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=47.77 E-value=37 Score=24.82 Aligned_cols=43 Identities=12% Similarity=0.088 Sum_probs=29.2
Q ss_pred HhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCCCchh
Q 046085 139 MDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMNDGTL 181 (230)
Q Consensus 139 m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~~~aL 181 (230)
+...|+.+-..|...+-...|++.|++.+...||+|-...+.+
T Consensus 92 ~~~~g~~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~g~~~~ 134 (162)
T 1mjh_A 92 LEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKTNL 134 (162)
T ss_dssp HHHTTCEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCCSSCC
T ss_pred HHHcCCceEEEEcCCCHHHHHHHHHHHcCCCEEEEcCCCCCCc
Confidence 3345665443343345677899999999999999998743333
No 467
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=47.59 E-value=6.4 Score=28.50 Aligned_cols=19 Identities=26% Similarity=0.335 Sum_probs=16.3
Q ss_pred HHHHHHHHHhcCccCCCCC
Q 046085 13 IKELFNQLEIKGVIRPAEP 31 (230)
Q Consensus 13 er~~l~~le~~g~i~p~ep 31 (230)
.|+-|+.||++|.|...++
T Consensus 33 IRrdL~~Le~~G~l~R~~~ 51 (78)
T 1xn7_A 33 INAMLQQLESMGKAVRIQE 51 (78)
T ss_dssp HHHHHHHHHHHTSEEEECC
T ss_pred HHHHHHHHHHCCCEEEecC
Confidence 5788999999999988843
No 468
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=47.43 E-value=31 Score=31.00 Aligned_cols=70 Identities=3% Similarity=-0.082 Sum_probs=44.6
Q ss_pred hhhhhhhhcEEEE---EccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCcchHHHHHHHHHcCCeE--EEe-cCCC
Q 046085 106 LVVKLKRVWFWVR---TMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDSDFVEVLQEATLRCLKT--GVA-GYMN 177 (230)
Q Consensus 106 La~eLrRAGv~Vr---tV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDSDF~~lLr~ARer~l~T--VVV-Gd~~ 177 (230)
+..++.+.|+-|- +++..+...|.. ..+..+.. +-.+..+++..+..+...+++.|++.|+.. +.| ++.+
T Consensus 217 ~~~~~~~~Gi~v~~~~~i~~~~~~~d~~--~~l~~i~~~~~~a~vii~~~~~~~~~~l~~~~~~~g~~~k~~~i~s~~w 293 (496)
T 3ks9_A 217 FKELAAQEGLSIAHSDKIYSNAGEKSFD--RLLRKLRERLPKARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGSDGW 293 (496)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCCHHHHH--HHHHHHHTTTTTTCEEEEECCHHHHHHHHHHHHHHTCCSCCEEEECTTT
T ss_pred HHHHHHHcCceEEEEEEECCCCCHHHHH--HHHHHHHhccCceEEEEEecChHHHHHHHHHHHHhCCCCcEEEEEechh
Confidence 4567788897665 444444455543 22222231 126777888888888999999999999983 444 5543
No 469
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=47.42 E-value=1.2e+02 Score=25.97 Aligned_cols=89 Identities=8% Similarity=0.003 Sum_probs=52.7
Q ss_pred hhhhhhhHHHHHHHhhhcCCccC-------CchhhhhhhhcEEEEEcc-----ccchHHHHHHHHHHHHHHhhcCcceEE
Q 046085 81 GNYSMRMETYKMASKATLTPKVG-------YSLVVKLKRVWFWVRTMS-----DKLQAADVLLRNYMVDMMDKRRFGCLV 148 (230)
Q Consensus 81 ~~~~~k~~KY~~AAr~vl~pkvg-------ygLa~eLrRAGv~VrtV~-----dKpqAAD~AL~~~m~~~m~~r~vdclv 148 (230)
++|..+.+......++.+.+.-+ ....--.++.|+.+..+. ..|.++|++= +.+.+...+|.||+
T Consensus 157 ~~~~~~L~~Ld~~~~~~l~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~---l~~~ik~~~v~~if 233 (286)
T 3gi1_A 157 KAFKKEAEQLTEEYTQKFKKVRSKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKE---IQDFVKEYNVKTIF 233 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSCCEEEEEESCCHHHHHHTTCEEEEEECSCC---CCHHHHHH---HHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCEEEEECCchHHHHHHCCCeEeeccccCCCCCCCHHHHHH---HHHHHHHcCCCEEE
Confidence 34444555555544544443222 123334577888777543 3578877764 44447778999988
Q ss_pred EEcCC-cchHHHHHHHHHcCCeEEEec
Q 046085 149 FVSDD-SDFVEVLQEATLRCLKTGVAG 174 (230)
Q Consensus 149 LVSDD-SDF~~lLr~ARer~l~TVVVG 174 (230)
.=+.- +..+.. .|++.|++++++.
T Consensus 234 ~e~~~~~~~~~~--la~~~g~~v~~l~ 258 (286)
T 3gi1_A 234 AEDNVNPKIAHA--IAKSTGAKVKTLS 258 (286)
T ss_dssp ECTTSCTHHHHH--HHHTTTCEEEECC
T ss_pred EeCCCChHHHHH--HHHHhCCeEEEec
Confidence 76543 344444 4889999988775
No 470
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=47.33 E-value=56 Score=21.26 Aligned_cols=83 Identities=16% Similarity=-0.009 Sum_probs=48.4
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHHc----CCeEEEecCCCC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATLR----CLKTGVAGYMND 178 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARer----~l~TVVVGd~~~ 178 (230)
.|...|.+.|+.|.++++..+|- +.+.+...+.+++=.+ +.+-..+++..++. ++..+++++..+
T Consensus 16 ~l~~~l~~~g~~v~~~~~~~~~~---------~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~~~~~~~ 86 (119)
T 2j48_A 16 VVCEMLTAAGFKVIWLVDGSTAL---------DQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVLFLGEPP 86 (119)
T ss_dssp HHHHHHHHTTCEEEEESCHHHHH---------HHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEEEESSCC
T ss_pred HHHHHHHhCCcEEEEecCHHHHH---------HHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEEEeCCCC
Confidence 46777888999998777544432 2233346776665433 33445678888874 577888877632
Q ss_pred c--hhhhhhh-ccccccchHH
Q 046085 179 G--TLKRIAD-RLKWAYNSEV 196 (230)
Q Consensus 179 ~--aL~r~AD-~leW~~~~e~ 196 (230)
. ++..-++ ++.-.+++++
T Consensus 87 ~~~~~~~g~~~~l~kp~~~~~ 107 (119)
T 2j48_A 87 VDPLLTAQASAILSKPLDPQL 107 (119)
T ss_dssp SSHHHHHHCSEECSSCSTTHH
T ss_pred chhhhhcCHHHhccCCCCHHH
Confidence 2 2222233 5555444443
No 471
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=47.31 E-value=35 Score=34.16 Aligned_cols=34 Identities=18% Similarity=0.066 Sum_probs=27.1
Q ss_pred CcchHHHHHHHHHcCCeEEEecCC-CCchhhhhhh
Q 046085 153 DSDFVEVLQEATLRCLKTGVAGYM-NDGTLKRIAD 186 (230)
Q Consensus 153 DSDF~~lLr~ARer~l~TVVVGd~-~~~aL~r~AD 186 (230)
..+-..+++..+++|-.+..|||+ ||-..=+.||
T Consensus 682 P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Ad 716 (995)
T 3ar4_A 682 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAE 716 (995)
T ss_dssp SSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHST
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCC
Confidence 457788889999999899999999 7655556677
No 472
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=47.18 E-value=21 Score=27.97 Aligned_cols=43 Identities=14% Similarity=0.104 Sum_probs=32.0
Q ss_pred cceEEEEcCCc-------chHHHHHHHHHcCCeEEEecCC---CCchhhhhhh
Q 046085 144 FGCLVFVSDDS-------DFVEVLQEATLRCLKTGVAGYM---NDGTLKRIAD 186 (230)
Q Consensus 144 vdclvLVSDDS-------DF~~lLr~ARer~l~TVVVGd~---~~~aL~r~AD 186 (230)
...+||+||=. +....++.+++.|++.++||-+ +...|..+|.
T Consensus 116 ~~~iillTDG~~~~~~~~~~~~~a~~l~~~gi~i~~igvG~~~~~~~L~~iA~ 168 (202)
T 1ijb_A 116 SRIALLLMASQEPQRMSRNFVRYVQGLKKKKVIVIPVGIGPHANLKQIRLIEK 168 (202)
T ss_dssp EEEEEEEECCCCCGGGCTTHHHHHHHHHHTTEEEEEEEESTTSCHHHHHHHHH
T ss_pred CeEEEEEccCCCCccchHHHHHHHHHHHHCCCEEEEEecCCcCCHHHHHHHhC
Confidence 46799999842 5677888999999988777765 3356777774
No 473
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=46.98 E-value=36 Score=25.73 Aligned_cols=81 Identities=15% Similarity=0.006 Sum_probs=41.9
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcC----cceEEEEcCCc-----chHHHHHHHHHcCC---eEEE
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRR----FGCLVFVSDDS-----DFVEVLQEATLRCL---KTGV 172 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~----vdclvLVSDDS-----DF~~lLr~ARer~l---~TVV 172 (230)
.+-..|+..|+.+-.+|..+.. ....+ +...+ ++. ++.|++. +=..+...++.-|+ .+++
T Consensus 102 ~~l~~l~~~g~~~~i~t~~~~~----~~~~~---l~~~~l~~~f~~-~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~ 173 (232)
T 1zrn_A 102 DSLRELKRRGLKLAILSNGSPQ----SIDAV---VSHAGLRDGFDH-LLSVDPVQVYKPDNRVYELAEQALGLDRSAILF 173 (232)
T ss_dssp HHHHHHHHTTCEEEEEESSCHH----HHHHH---HHHTTCGGGCSE-EEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEE
T ss_pred HHHHHHHHCCCEEEEEeCCCHH----HHHHH---HHhcChHhhhhe-EEEecccCCCCCCHHHHHHHHHHcCCCcccEEE
Confidence 3456688889988888888764 11222 22223 333 3334432 21223333344455 4788
Q ss_pred ecCC-CCchhhhhhh----ccccccc
Q 046085 173 AGYM-NDGTLKRIAD----RLKWAYN 193 (230)
Q Consensus 173 VGd~-~~~aL~r~AD----~leW~~~ 193 (230)
|||. +|-...+.|. ++.|..+
T Consensus 174 iGD~~~Di~~a~~aG~~~~~~~~~~~ 199 (232)
T 1zrn_A 174 VASNAWDATGARYFGFPTCWINRTGN 199 (232)
T ss_dssp EESCHHHHHHHHHHTCCEEEECTTCC
T ss_pred EeCCHHHHHHHHHcCCEEEEEcCCCC
Confidence 8887 4333445555 5555543
No 474
>3bvp_A INT, TP901-1 integrase; DNA recombinase, recombination; 2.10A {Lactococcus phage tp901-1}
Probab=46.94 E-value=27 Score=26.26 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=35.5
Q ss_pred hhhcEEEEEccccchHHH---HHHH-HHHHHHHhhcCcceEEEEcC---------CcchHHHHHHHHHcCCeEEEecCC
Q 046085 111 KRVWFWVRTMSDKLQAAD---VLLR-NYMVDMMDKRRFGCLVFVSD---------DSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 111 rRAGv~VrtV~dKpqAAD---~AL~-~~m~~~m~~r~vdclvLVSD---------DSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.++..|+| ||..-|+.+ ..-+ ..+.+.....|..+.-..+| .+.|..+|..+++-.+.+|||-+.
T Consensus 3 ~~~~~Y~R-vSt~~Q~~~~~sl~~Q~~~l~~~a~~~g~~~~~~~~D~g~Sg~~~~Rp~l~~ll~~~~~g~~d~lvv~~l 80 (138)
T 3bvp_A 3 KKVAIYTR-VSTTNQAEEGFSIDEQIDRLTKYAEAMGWQVSDTYTDAGFSGAKLERPAMQRLINDIENKAFDTVLVYKL 80 (138)
T ss_dssp CEEEEEEE-ESSSCGGGSSSCHHHHHHHHHHHHHHTTCEEEEEEEEETCCSSSSCCHHHHHHHHGGGGTSCSEEEESSH
T ss_pred cEEEEEEE-ECchhhcccCCCHHHHHHHHHHHHHHCCCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 35667778 666555421 1111 12223333445544333333 357788888888777778888764
No 475
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=46.75 E-value=72 Score=22.34 Aligned_cols=84 Identities=10% Similarity=-0.062 Sum_probs=50.8
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhh-cCcceEEEEcC---CcchHHHHHHHHH-cCCeEEEecCCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDK-RRFGCLVFVSD---DSDFVEVLQEATL-RCLKTGVAGYMND 178 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~-r~vdclvLVSD---DSDF~~lLr~ARe-r~l~TVVVGd~~~ 178 (230)
-+|...|.+.|+.|.++++..+|- +.+.+ ..+|.+++=.. +.+-.++++..|+ .++..+++....+
T Consensus 19 ~~l~~~L~~~g~~v~~~~~~~~a~---------~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ii~ls~~~~ 89 (140)
T 3h5i_A 19 KTIANILNKYGYTVEIALTGEAAV---------EKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPVVFLTAHTE 89 (140)
T ss_dssp HHHHHHHHHTTCEEEEESSHHHHH---------HHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCEEEEESSSS
T ss_pred HHHHHHHHHcCCEEEEecChHHHH---------HHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCEEEEECCCC
Confidence 457788889999999877765552 22323 46776665432 2555667777776 5788888877633
Q ss_pred c-----hhhhhhh-ccccccchHH
Q 046085 179 G-----TLKRIAD-RLKWAYNSEV 196 (230)
Q Consensus 179 ~-----aL~r~AD-~leW~~~~e~ 196 (230)
. ++..-|+ +|.--+++++
T Consensus 90 ~~~~~~~~~~g~~~~l~KP~~~~~ 113 (140)
T 3h5i_A 90 PAVVEKIRSVTAYGYVMKSATEQV 113 (140)
T ss_dssp CCCCGGGGGSCEEEEEETTCCHHH
T ss_pred HHHHHHHHhCCCcEEEeCCCCHHH
Confidence 2 2222223 6665555544
No 476
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=46.68 E-value=63 Score=24.55 Aligned_cols=21 Identities=19% Similarity=0.211 Sum_probs=14.4
Q ss_pred chhhhhhhhcEEEEEccccch
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQ 125 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpq 125 (230)
.+-..|+..|+.+-.+|..+.
T Consensus 41 ~~L~~L~~~g~~~~i~Tn~~~ 61 (189)
T 3ib6_A 41 ETLEKVKQLGFKQAILSNTAT 61 (189)
T ss_dssp HHHHHHHHTTCEEEEEECCSS
T ss_pred HHHHHHHHCCCEEEEEECCCc
Confidence 344667777877777777664
No 477
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=46.50 E-value=77 Score=26.56 Aligned_cols=39 Identities=8% Similarity=-0.174 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCcceEEEEcC-CcchHHHHHHHHHcCCeEEEec
Q 046085 133 NYMVDMMDKRRFGCLVFVSD-DSDFVEVLQEATLRCLKTGVAG 174 (230)
Q Consensus 133 ~~m~~~m~~r~vdclvLVSD-DSDF~~lLr~ARer~l~TVVVG 174 (230)
..+.+.+...+.|+|+ +| -..|.. .-.|+..|+.+|.+.
T Consensus 108 ~~l~~~l~~~~PDlVi--~d~~~~~~~-~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 108 RATAEALDGDVPDLVL--YDDFPFIAG-QLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHSSSCCSEEE--EESTTHHHH-HHHHHHTTCCEEEEE
T ss_pred HHHHHHHhccCCCEEE--ECchhhhHH-HHHHHHhCCCEEEEE
Confidence 4556666566788776 45 444544 446888999999987
No 478
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=46.48 E-value=18 Score=33.29 Aligned_cols=43 Identities=9% Similarity=0.095 Sum_probs=30.6
Q ss_pred HHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeE-EEecCC
Q 046085 134 YMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKT-GVAGYM 176 (230)
Q Consensus 134 ~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~T-VVVGd~ 176 (230)
.+...|.+.|+.+-+...++..+..-++.|...|+.. ||||+.
T Consensus 437 ~l~~~Lr~~Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~ 480 (517)
T 4g85_A 437 KLVSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQ 480 (517)
T ss_dssp HHHHHHHHTTCCEEECSSSSCCHHHHHHHHHHHCCCEEEEECHH
T ss_pred HHHHHHHHCCCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECCh
Confidence 3555677788887766556667888888888888865 556753
No 479
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=46.46 E-value=62 Score=27.06 Aligned_cols=86 Identities=17% Similarity=0.081 Sum_probs=49.7
Q ss_pred cCCccC-CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcc----eEEE---------EcCC-----cchHH
Q 046085 98 LTPKVG-YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFG----CLVF---------VSDD-----SDFVE 158 (230)
Q Consensus 98 l~pkvg-ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vd----clvL---------VSDD-----SDF~~ 158 (230)
+.|.-| -.+-..|+.+|+.+-.+|..+... ...+.+. .|++ ..+- ++++ ++=..
T Consensus 177 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~----~~~~~~~---lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~ 249 (335)
T 3n28_A 177 LPLMPELPELVATLHAFGWKVAIASGGFTYF----SDYLKEQ---LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADI 249 (335)
T ss_dssp CCCCTTHHHHHHHHHHTTCEEEEEEEEEHHH----HHHHHHH---HTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHH
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEEeCCcHHH----HHHHHHH---cCCCeEEeeeeEeeCCeeeeeecccccChhhhHHH
Confidence 444433 346678899999999999887642 2222222 2332 1111 2222 23334
Q ss_pred HHHHHHHcCC---eEEEecCC-CCchhhhhhh-cccc
Q 046085 159 VLQEATLRCL---KTGVAGYM-NDGTLKRIAD-RLKW 190 (230)
Q Consensus 159 lLr~ARer~l---~TVVVGd~-~~~aL~r~AD-~leW 190 (230)
+.+.+.+.|+ .+++|||+ +|-...+.|+ .+-|
T Consensus 250 ~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 250 LLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 5555555665 69999999 7666777777 4445
No 480
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=46.27 E-value=67 Score=21.83 Aligned_cols=64 Identities=16% Similarity=0.070 Sum_probs=41.2
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhc-CcceEEEEcC--C-cchHHHHHHHHHc--CCeEEEecCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKR-RFGCLVFVSD--D-SDFVEVLQEATLR--CLKTGVAGYM 176 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r-~vdclvLVSD--D-SDF~~lLr~ARer--~l~TVVVGd~ 176 (230)
-.|...|...|+.|.++++..+| .+.+... ..+.+++=.+ + .+-.++++..++. ++..+++++.
T Consensus 19 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~~ 88 (132)
T 2rdm_A 19 LDFESTLTDAGFLVTAVSSGAKA---------IEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISGH 88 (132)
T ss_dssp HHHHHHHHHTTCEEEEESSHHHH---------HHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEESS
T ss_pred HHHHHHHHHcCCEEEEECCHHHH---------HHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 35677788889999877664443 2334344 5776665332 2 4455778888875 5778888776
No 481
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=46.26 E-value=14 Score=32.58 Aligned_cols=79 Identities=9% Similarity=-0.061 Sum_probs=48.4
Q ss_pred hhhhhhhhc-EEEEEccccchHHHH--HHHHHHHHHHhhcCcceEEE--EcCCcch---HHHHHHHHHcCCeEEE-ecCC
Q 046085 106 LVVKLKRVW-FWVRTMSDKLQAADV--LLRNYMVDMMDKRRFGCLVF--VSDDSDF---VEVLQEATLRCLKTGV-AGYM 176 (230)
Q Consensus 106 La~eLrRAG-v~VrtV~dKpqAAD~--AL~~~m~~~m~~r~vdclvL--VSDDSDF---~~lLr~ARer~l~TVV-VGd~ 176 (230)
|..+|++.| =.|=.|.|+ ..... -+...+.+.+.+.|++++++ |..++.+ ..+++.+++.+...|| ||.+
T Consensus 24 l~~~l~~~g~~~~livtd~-~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGG 102 (387)
T 3bfj_A 24 VGERCQLLGGKKALLVTDK-GLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGG 102 (387)
T ss_dssp HHHHHHHTTCSEEEEECCT-TTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESH
T ss_pred HHHHHHHcCCCEEEEEECc-chhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 344556666 344556774 33333 25777888887778887665 3444444 5567778888998777 7887
Q ss_pred CCchhhhhh
Q 046085 177 NDGTLKRIA 185 (230)
Q Consensus 177 ~~~aL~r~A 185 (230)
+...+.+.+
T Consensus 103 sv~D~aK~i 111 (387)
T 3bfj_A 103 SPHDCGKGI 111 (387)
T ss_dssp HHHHHHHHH
T ss_pred chhhHHHHH
Confidence 444444443
No 482
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=46.22 E-value=33 Score=28.42 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=44.1
Q ss_pred hhhhhhhhcEEEEEc-cccchHHHHHHHHHHHHHHhhcCcceEEE--E----cCCcchHHHHHHHHHcCC--e-EEEecC
Q 046085 106 LVVKLKRVWFWVRTM-SDKLQAADVLLRNYMVDMMDKRRFGCLVF--V----SDDSDFVEVLQEATLRCL--K-TGVAGY 175 (230)
Q Consensus 106 La~eLrRAGv~VrtV-~dKpqAAD~AL~~~m~~~m~~r~vdclvL--V----SDDSDF~~lLr~ARer~l--~-TVVVGd 175 (230)
++..|+.+||.|.-+ .+.|.. ++.+.+...+.+.++| - +.-..+..+++..+++|+ + .|+||.
T Consensus 112 v~~~l~~~G~~Vi~LG~~vp~e-------~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG 184 (215)
T 3ezx_A 112 VTTMLGANGFQIVDLGVDVLNE-------NVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGG 184 (215)
T ss_dssp HHHHHHHTSCEEEECCSSCCHH-------HHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHTTCGGGSEEEEES
T ss_pred HHHHHHHCCCeEEEcCCCCCHH-------HHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 577899999999855 455544 3344444577888777 2 223457888999999987 2 477887
Q ss_pred C
Q 046085 176 M 176 (230)
Q Consensus 176 ~ 176 (230)
.
T Consensus 185 ~ 185 (215)
T 3ezx_A 185 A 185 (215)
T ss_dssp S
T ss_pred C
Confidence 6
No 483
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=46.00 E-value=6.5 Score=29.34 Aligned_cols=19 Identities=16% Similarity=0.323 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhcCccCCCC
Q 046085 12 KIKELFNQLEIKGVIRPAE 30 (230)
Q Consensus 12 ~er~~l~~le~~g~i~p~e 30 (230)
-.|+-|+.||++|.|....
T Consensus 32 TIRrDL~~Le~~G~l~R~~ 50 (87)
T 2k02_A 32 LIDAMLERMEAMGKVVRIS 50 (87)
T ss_dssp HHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHHHHHCCCEEEEe
Confidence 4688999999999999873
No 484
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=45.55 E-value=39 Score=25.19 Aligned_cols=84 Identities=10% Similarity=-0.008 Sum_probs=42.9
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCcc-----hHHHHHHHHHcCC---eEEEecC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDSD-----FVEVLQEATLRCL---KTGVAGY 175 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDSD-----F~~lLr~ARer~l---~TVVVGd 175 (230)
.+-..|+..|+.+-.++..+... ...+.+.+. ..-++. ++.|++.. =..+...++.-|+ .+++|||
T Consensus 103 ~~l~~l~~~g~~~~i~s~~~~~~----~~~~l~~~~l~~~f~~-~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD 177 (230)
T 3um9_A 103 QALQQLRAAGLKTAILSNGSRHS----IRQVVGNSGLTNSFDH-LISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSC 177 (230)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHH----HHHHHHHHTCGGGCSE-EEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHhCCCeEEEEeCCCHHH----HHHHHHHCCChhhcce-eEehhhcccCCCChHHHHHHHHHhCCCcccEEEEeC
Confidence 45567888999988888887531 112211110 111343 34444332 1233333444454 4888888
Q ss_pred C-CCchhhhhhh----ccccccc
Q 046085 176 M-NDGTLKRIAD----RLKWAYN 193 (230)
Q Consensus 176 ~-~~~aL~r~AD----~leW~~~ 193 (230)
+ +|-...+.|. ++.|..+
T Consensus 178 ~~~Di~~a~~aG~~~~~~~~~~~ 200 (230)
T 3um9_A 178 NSWDATGAKYFGYPVCWINRSNG 200 (230)
T ss_dssp CHHHHHHHHHHTCCEEEECTTSC
T ss_pred CHHHHHHHHHCCCEEEEEeCCCC
Confidence 8 4334444454 4555443
No 485
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=45.49 E-value=43 Score=28.74 Aligned_cols=83 Identities=17% Similarity=0.108 Sum_probs=52.7
Q ss_pred hhhhhhhcE--EEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEc-CC---cc-----hHHHHHHH-HHcCCeEEEec
Q 046085 107 VVKLKRVWF--WVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVS-DD---SD-----FVEVLQEA-TLRCLKTGVAG 174 (230)
Q Consensus 107 a~eLrRAGv--~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVS-DD---SD-----F~~lLr~A-Rer~l~TVVVG 174 (230)
|..|+.+|- .|-.|+-.|..++.+|+.-+ ..|+|-+++|+ |+ .. ++.+|..+ ++.+...|+.|
T Consensus 49 A~~Lke~g~~~~V~av~~G~~~a~~~lr~al-----a~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G 123 (255)
T 1efv_B 49 AVRLKEKKLVKEVIAVSCGPAQCQETIRTAL-----AMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLG 123 (255)
T ss_dssp HHHHHHTTSCSEEEEEEEESTTHHHHHHHHH-----HHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHhcCCCceEEEEEeCChhHHHHHHHHH-----hcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 555665454 67777777765555555442 35999999999 54 12 33455444 34577899999
Q ss_pred CCC-----Cchhhhhhhccccccch
Q 046085 175 YMN-----DGTLKRIADRLKWAYNS 194 (230)
Q Consensus 175 d~~-----~~aL~r~AD~leW~~~~ 194 (230)
..+ .+...++|-.|.|-.-.
T Consensus 124 ~~s~d~d~~~v~p~lA~~L~~~~vt 148 (255)
T 1efv_B 124 KQAIDDDCNQTGQMTAGFLDWPQGT 148 (255)
T ss_dssp SCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred CcccCCchhhHHHHHHHHhCCCccc
Confidence 875 34666777766665443
No 486
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=45.32 E-value=19 Score=32.03 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=34.1
Q ss_pred ceEEEEcCC---cchHHHHHHHHHcC-CeEEEecCCCCchhhhhhh
Q 046085 145 GCLVFVSDD---SDFVEVLQEATLRC-LKTGVAGYMNDGTLKRIAD 186 (230)
Q Consensus 145 dclvLVSDD---SDF~~lLr~ARer~-l~TVVVGd~~~~aL~r~AD 186 (230)
+.++.+|-. .|-..+++.|+++| ++|+.|-+..+..|.+.||
T Consensus 103 dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD 148 (372)
T 3tbf_A 103 SLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESD 148 (372)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSS
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCC
Confidence 566666643 36677889999999 9999998876779999999
No 487
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=45.32 E-value=66 Score=21.46 Aligned_cols=61 Identities=13% Similarity=0.076 Sum_probs=39.2
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC---CcchHHHHHHHHHc----CCeEEEe
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD---DSDFVEVLQEATLR----CLKTGVA 173 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD---DSDF~~lLr~ARer----~l~TVVV 173 (230)
-.|...|.+.|+.|.++++..+|- +.+.....+.+++=.+ +.+-..+++..|+. .+..+++
T Consensus 19 ~~l~~~L~~~g~~v~~~~~~~~a~---------~~~~~~~~dlvi~d~~~~~~~~g~~~~~~l~~~~~~~~~~ii~~ 86 (127)
T 2gkg_A 19 ATLRSALEGRGFTVDETTDGKGSV---------EQIRRDRPDLVVLAVDLSAGQNGYLICGKLKKDDDLKNVPIVII 86 (127)
T ss_dssp HHHHHHHHHHTCEEEEECCHHHHH---------HHHHHHCCSEEEEESBCGGGCBHHHHHHHHHHSTTTTTSCEEEE
T ss_pred HHHHHHHHhcCceEEEecCHHHHH---------HHHHhcCCCEEEEeCCCCCCCCHHHHHHHHhcCccccCCCEEEE
Confidence 457778888999998776654442 2233345776665332 33445778888875 6778888
No 488
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=45.30 E-value=47 Score=26.91 Aligned_cols=69 Identities=13% Similarity=0.101 Sum_probs=46.1
Q ss_pred cCCchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHc-----CCeEEEec
Q 046085 102 VGYSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLR-----CLKTGVAG 174 (230)
Q Consensus 102 vgygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer-----~l~TVVVG 174 (230)
+|..+|..|-+.|..|-.+...+.....++... +...+..+.++..|-+|...+-+.+.+. ++..+|--
T Consensus 41 IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~n 114 (271)
T 4iin_A 41 IGAEIAKTLASMGLKVWINYRSNAEVADALKNE----LEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNN 114 (271)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHH----HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH----HHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 367899999999999986666444333333333 3345677888888888877766665542 67776643
No 489
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=45.25 E-value=47 Score=27.94 Aligned_cols=52 Identities=12% Similarity=-0.013 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCCCCchhhh
Q 046085 129 VLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYMNDGTLKR 183 (230)
Q Consensus 129 ~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~~~~aL~r 183 (230)
.-|+.|..+.+...+++-+++|+|+..+..++ ...|++.+......+.+..+
T Consensus 34 kPli~~~l~~l~~~~i~~VvVvt~~~~i~~~~---~~~g~~v~~~~~~~~~Gt~~ 85 (256)
T 3tqd_A 34 KPMIQHVYESAIKSGAEEVVIATDDKRIRQVA---EDFGAVVCMTSSDHQSGTER 85 (256)
T ss_dssp EEHHHHHHHHHHHTTCSEEEEEESCHHHHHHH---HHTTCEEEECCTTCCSHHHH
T ss_pred chHHHHHHHHHHhCCCCEEEEECCHHHHHHHH---HHcCCeEEEeCCCCCCcHHH
Confidence 34778888888767899999999875555544 45788876654333334433
No 490
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=44.88 E-value=89 Score=22.86 Aligned_cols=85 Identities=13% Similarity=-0.022 Sum_probs=46.6
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCcc-----hHHHHHHHHHcCC---eEEEecC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDSD-----FVEVLQEATLRCL---KTGVAGY 175 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDSD-----F~~lLr~ARer~l---~TVVVGd 175 (230)
.+-..|+..|+.+-.++..+... ...+.+.+. ..-++. ++.|++.. =..+...+...|+ .+++|||
T Consensus 101 ~~l~~l~~~g~~~~i~t~~~~~~----~~~~l~~~~~~~~~~~-~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD 175 (226)
T 1te2_A 101 EAVALCKEQGLLVGLASASPLHM----LEKVLTMFDLRDSFDA-LASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALED 175 (226)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHH----HHHHHHHTTCGGGCSE-EEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEES
T ss_pred HHHHHHHHCCCcEEEEeCCcHHH----HHHHHHhcCcHhhCcE-EEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeC
Confidence 34467888898888888776531 122222220 011333 34444422 2233344444565 4899999
Q ss_pred C-CCchhhhhhh----ccccccch
Q 046085 176 M-NDGTLKRIAD----RLKWAYNS 194 (230)
Q Consensus 176 ~-~~~aL~r~AD----~leW~~~~ 194 (230)
+ +|-...+.|. ++.|..+.
T Consensus 176 ~~nDi~~a~~aG~~~~~~~~~~~~ 199 (226)
T 1te2_A 176 SVNGMIASKAARMRSIVVPAPEAQ 199 (226)
T ss_dssp SHHHHHHHHHTTCEEEECCCTTTT
T ss_pred CHHHHHHHHHcCCEEEEEcCCCCc
Confidence 9 6555666777 66776654
No 491
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=44.78 E-value=37 Score=23.42 Aligned_cols=48 Identities=15% Similarity=0.043 Sum_probs=27.7
Q ss_pred ccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHHcCCeEEEecCC
Q 046085 122 DKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATLRCLKTGVAGYM 176 (230)
Q Consensus 122 dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARer~l~TVVVGd~ 176 (230)
.||.. ....++.+.+ +...+-.+.|-|.. .+ +..|++.|+.+|.|..+
T Consensus 73 ~Kp~~---~~~~~~~~~~-~~~~~~~~~vgD~~--~d-i~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 73 EKPEE---AAFQAAADAI-DLPMRDCVLVDDSI--LN-VRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp CTTSH---HHHHHHHHHT-TCCGGGEEEEESCH--HH-HHHHHHHTCEEEECSCH
T ss_pred CCCCH---HHHHHHHHHc-CCCcccEEEEcCCH--HH-HHHHHHCCCEEEEeCCh
Confidence 45554 3444554444 22333455666554 24 77888888888877664
No 492
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=44.74 E-value=1.4 Score=36.86 Aligned_cols=78 Identities=18% Similarity=0.049 Sum_probs=0.0
Q ss_pred hhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcchHHHHHHHHH-----cCCeEEEecCCCCch
Q 046085 106 LVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDFVEVLQEATL-----RCLKTGVAGYMNDGT 180 (230)
Q Consensus 106 La~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF~~lLr~ARe-----r~l~TVVVGd~~~~a 180 (230)
|+..|+.+|+.|..++-=-..........+.+.+....+|+++ +++-|-+..++..+.+ .+++.++||..+-.+
T Consensus 156 L~~~L~~~G~~v~~~~vY~~~~~~~~~~~~~~~l~~~~~d~v~-ftS~s~v~~~~~~~~~~~~~l~~~~~~aIG~~Ta~~ 234 (269)
T 3re1_A 156 LAEQLRERGVGVDYLPLYRRYLPQHAPGTLLQRVEVERLNGLV-VSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRVASL 234 (269)
T ss_dssp HHHHHHHTTCEEEEEECEEEECCCCCTTTTHHHHHHTTCCEEE-CSSHHHHTTTHHHHGGGHHHHTTSCEEESSHHHHHH
T ss_pred HHHHHHHCCCEEEEEeEEEEECCCCCHHHHHHHHHcCCCCEEE-EcCHHHHHHHHHHhhHHHHHHhCCeEEEECHHHHHH
Q ss_pred hhhh
Q 046085 181 LKRI 184 (230)
Q Consensus 181 L~r~ 184 (230)
+...
T Consensus 235 l~~~ 238 (269)
T 3re1_A 235 AQAA 238 (269)
T ss_dssp HHHH
T ss_pred HHHC
No 493
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=44.64 E-value=72 Score=21.76 Aligned_cols=65 Identities=9% Similarity=-0.037 Sum_probs=39.6
Q ss_pred CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC--CcchHHHHHHHHHc--CCeEEEecCCC
Q 046085 104 YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD--DSDFVEVLQEATLR--CLKTGVAGYMN 177 (230)
Q Consensus 104 ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD--DSDF~~lLr~ARer--~l~TVVVGd~~ 177 (230)
-+|...|.+.|+.|.++++..+| .+.+.+...|.+++=.+ +.+-.++++..|+. ....+++.+..
T Consensus 21 ~~l~~~L~~~g~~v~~~~~~~~a---------~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 21 SLLDSWFSSLGATTVLAADGVDA---------LELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHHHHHHTTCEEEEESCHHHH---------HHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHHHHhCCceEEEeCCHHHH---------HHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 45777888999999876654333 23344556775555322 33445677777775 46777877763
No 494
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens}
Probab=44.60 E-value=8 Score=34.15 Aligned_cols=87 Identities=9% Similarity=0.181 Sum_probs=55.7
Q ss_pred HHHHHHhHHHHHHHhhhhhhcccchhhHhHhhhhhhhHHHHHHHhhhcCCccC-----CchhhhhhhhcEEEEEccccch
Q 046085 51 NHFKQIHKREQKKRLNQIESAKGKMREHLVGNYSMRMETYKMASKATLTPKVG-----YSLVVKLKRVWFWVRTMSDKLQ 125 (230)
Q Consensus 51 kHFkqlHeREr~Krlnri~s~kGkrR~~~~~~~~~k~~KY~~AAr~vl~pkvg-----ygLa~eLrRAGv~VrtV~dKpq 125 (230)
-+|..| ..|+..-++.|.+-.+.+|.. ++-.+..|. -+.+..| -.|+.-|+..||-|.+..|.-.
T Consensus 37 ~~~~~~-~~~~~~e~Y~m~~~~~~~r~a----LII~N~~f~-----~l~~R~G~~~Da~~L~~~f~~LGF~V~~~~dlt~ 106 (302)
T 3e4c_A 37 EEAQRI-WKQKSAEIYPIMDKSSRTRLA----LIICNEEFD-----SIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTA 106 (302)
T ss_dssp HHHHHH-HHHHGGGBCCCCCTTTCCCEE----EEEECCSCS-----SSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCH
T ss_pred HHHHHH-HHhccccccccCCCCCCccEE----EEEECcCCC-----CCCCCCCcHHHHHHHHHHHHHCCCEEEEeeCCCH
Confidence 445555 346777788888887777763 445555664 2455555 6799999999999998888554
Q ss_pred HHHHHHHHHHHHHH---hhcCcceEEEE
Q 046085 126 AADVLLRNYMVDMM---DKRRFGCLVFV 150 (230)
Q Consensus 126 AAD~AL~~~m~~~m---~~r~vdclvLV 150 (230)
. .+.+-+.+.. +....||+++|
T Consensus 107 ~---em~~~l~~f~~~~dh~~~d~~vv~ 131 (302)
T 3e4c_A 107 S---DMTTELEAFAHRPEHKTSDSTFLV 131 (302)
T ss_dssp H---HHHHHHHHHHTCGGGGGCSCEEEE
T ss_pred H---HHHHHHHHHHhhhccCCCCEEEEE
Confidence 4 3344444432 23456777643
No 495
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=44.45 E-value=15 Score=27.95 Aligned_cols=86 Identities=10% Similarity=-0.090 Sum_probs=44.9
Q ss_pred chhhhhhhhcEEEEEccccchH-HHHHHHHHHHHHHhhcCc--ceEEEEcCCcc-----hHHHHHHHHHcCC---eEEEe
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQA-ADVLLRNYMVDMMDKRRF--GCLVFVSDDSD-----FVEVLQEATLRCL---KTGVA 173 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqA-AD~AL~~~m~~~m~~r~v--dclvLVSDDSD-----F~~lLr~ARer~l---~TVVV 173 (230)
.+-..|+..|+.+-.++..+.. ....|.. -+ ..-+ +. +..|++.. =..+...+..-|+ .+++|
T Consensus 115 ~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~----~l-~~~f~~~~-~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~v 188 (247)
T 3dv9_A 115 EVLTKIKSEGLTPMVVTGSGQTSLLDRLNH----NF-PGIFQANL-MVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVI 188 (247)
T ss_dssp HHHHHHHHTTCEEEEECSCC---CHHHHHH----HS-TTTCCGGG-EECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEE
T ss_pred HHHHHHHHcCCcEEEEcCCchHHHHHHHHh----hH-HHhcCCCe-EEecccCCCCCCCCHHHHHHHHHcCCChhheEEE
Confidence 4556788999999889888754 2222221 11 1123 22 33333321 1223334444454 48888
Q ss_pred cCC-CCchhhhhhh----ccccccchHH
Q 046085 174 GYM-NDGTLKRIAD----RLKWAYNSEV 196 (230)
Q Consensus 174 Gd~-~~~aL~r~AD----~leW~~~~e~ 196 (230)
||+ +|-...+.|. ++.|.+.+..
T Consensus 189 GD~~~Di~~a~~aG~~~i~v~~~~~~~~ 216 (247)
T 3dv9_A 189 ENAPLGVQAGVAAGIFTIAVNTGPLHDN 216 (247)
T ss_dssp ECSHHHHHHHHHTTSEEEEECCSSSCHH
T ss_pred eCCHHHHHHHHHCCCeEEEEcCCCCCHH
Confidence 988 5445555555 5666655544
No 496
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=44.36 E-value=1e+02 Score=23.54 Aligned_cols=101 Identities=9% Similarity=-0.229 Sum_probs=53.1
Q ss_pred HHHHHhhhcCCccC-CchhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcCCcch-----HHHHHHH
Q 046085 90 YKMASKATLTPKVG-YSLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSDDSDF-----VEVLQEA 163 (230)
Q Consensus 90 Y~~AAr~vl~pkvg-ygLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSDDSDF-----~~lLr~A 163 (230)
|.........|-.| ..+-..|+..|+.+-.++..+...=..+..++ . +...-++. +..|++... ..+...+
T Consensus 102 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~-~-~~~~~~~~-~~~~~~~~~~kp~~~~~~~~~ 178 (277)
T 3iru_A 102 QTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAA-K-EQGYTPAS-TVFATDVVRGRPFPDMALKVA 178 (277)
T ss_dssp HHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH-H-HTTCCCSE-EECGGGSSSCTTSSHHHHHHH
T ss_pred HHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhc-C-cccCCCce-EecHHhcCCCCCCHHHHHHHH
Confidence 33333333344333 34556788999999999988864211222211 1 11111343 333443322 2334444
Q ss_pred HHcCC----eEEEecCC-CCchhhhhhh----ccccccc
Q 046085 164 TLRCL----KTGVAGYM-NDGTLKRIAD----RLKWAYN 193 (230)
Q Consensus 164 Rer~l----~TVVVGd~-~~~aL~r~AD----~leW~~~ 193 (230)
..-|+ .+++|||+ +|-.-.+.|. ++.|.+.
T Consensus 179 ~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~ 217 (277)
T 3iru_A 179 LELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGN 217 (277)
T ss_dssp HHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSST
T ss_pred HHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCc
Confidence 44454 46999999 5555556666 6788864
No 497
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=44.28 E-value=1e+02 Score=24.75 Aligned_cols=67 Identities=12% Similarity=-0.027 Sum_probs=43.9
Q ss_pred hhhhhhhhcEEEEEccc--------------------cch--HHHHHHHHHHHHHHhhcCcceEEEEcCCc---------
Q 046085 106 LVVKLKRVWFWVRTMSD--------------------KLQ--AADVLLRNYMVDMMDKRRFGCLVFVSDDS--------- 154 (230)
Q Consensus 106 La~eLrRAGv~VrtV~d--------------------Kpq--AAD~AL~~~m~~~m~~r~vdclvLVSDDS--------- 154 (230)
+...|+..|+.|-.+.- .|. .+.+...+.+.+.+...|+..+++.+...
T Consensus 56 ~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~ 135 (290)
T 3tva_A 56 FRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYS 135 (290)
T ss_dssp HHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHH
T ss_pred HHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHH
Confidence 55667788887775521 111 33455666777777788999999865421
Q ss_pred ----chHHHHHHHHHcCCeEEE
Q 046085 155 ----DFVEVLQEATLRCLKTGV 172 (230)
Q Consensus 155 ----DF~~lLr~ARer~l~TVV 172 (230)
.|..++..|.+.|++..+
T Consensus 136 ~~~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 136 ELVRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHcCCEEEE
Confidence 266777888889986544
No 498
>3c3j_A Putative tagatose-6-phosphate ketose/aldose isome; tagatose-6-phosphate ketose/aldose isomerase, structural GEN PSI, MCSG; 1.80A {Escherichia coli}
Probab=44.24 E-value=23 Score=31.29 Aligned_cols=73 Identities=14% Similarity=-0.017 Sum_probs=46.3
Q ss_pred hhhhh-hcEEEEEccccchHHHHHHHHHHHHHHhhcCcceEEEEcC---CcchHHHHHHHHHc--CCeEEEecCCCCchh
Q 046085 108 VKLKR-VWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFGCLVFVSD---DSDFVEVLQEATLR--CLKTGVAGYMNDGTL 181 (230)
Q Consensus 108 ~eLrR-AGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vdclvLVSD---DSDF~~lLr~ARer--~l~TVVVGd~~~~aL 181 (230)
.-|.+ .|+.|..+++ . +. +.. -...+....=+.++.+|- ..|-..+++.|+++ |++|+.|-+..+..|
T Consensus 73 ~~l~~~~g~~v~~~~~-~---~~-~~~-~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~~ga~~iaIT~~~~S~L 146 (384)
T 3c3j_A 73 PWLASHTGKNFSAVPT-T---DL-VTN-PMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGAL 146 (384)
T ss_dssp HHHHHHHCSEEEECCH-H---HH-HHC-HHHHCCTTSCEEEEEEESSSCCHHHHHHHHHHHHHCSSEEEEEEESCTTSHH
T ss_pred HHHHHHhCCcEEEecc-H---HH-HhC-hhhhhCCCCCeEEEEEeCCcCCHHHHHHHHHHHhhCCCCCEEEEECCCCCHH
Confidence 34556 7998887754 1 11 111 111121112355555554 34567788999999 999999988766799
Q ss_pred hhhhh
Q 046085 182 KRIAD 186 (230)
Q Consensus 182 ~r~AD 186 (230)
.+.||
T Consensus 147 a~~ad 151 (384)
T 3c3j_A 147 YQNAI 151 (384)
T ss_dssp HHHHH
T ss_pred Hhhhc
Confidence 99999
No 499
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=43.96 E-value=49 Score=24.64 Aligned_cols=85 Identities=13% Similarity=-0.083 Sum_probs=45.1
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHhhcCcc---eEEEEcCCcc-----hHHHHHHHHHcCC---eEEEe
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMDKRRFG---CLVFVSDDSD-----FVEVLQEATLRCL---KTGVA 173 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~~r~vd---clvLVSDDSD-----F~~lLr~ARer~l---~TVVV 173 (230)
.+-.+|+..|+.+-.++..+.. .... .+...++. ..++.|++.. =..+...+..-|+ .++.|
T Consensus 98 ~~l~~l~~~g~~~~i~s~~~~~----~~~~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~i 170 (233)
T 3s6j_A 98 ELLETLDKENLKWCIATSGGID----TATI---NLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVI 170 (233)
T ss_dssp HHHHHHHHTTCCEEEECSSCHH----HHHH---HHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHCCCeEEEEeCCchh----hHHH---HHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEE
Confidence 4556788888888888877653 1111 22222322 2344454433 2233344444555 47888
Q ss_pred cCC-CCchhhhhhh----ccccccchHH
Q 046085 174 GYM-NDGTLKRIAD----RLKWAYNSEV 196 (230)
Q Consensus 174 Gd~-~~~aL~r~AD----~leW~~~~e~ 196 (230)
||+ +|-...+.|. ++.|.++...
T Consensus 171 GD~~~Di~~a~~aG~~~i~v~~g~~~~~ 198 (233)
T 3s6j_A 171 GDAIWDMLAARRCKATGVGLLSGGYDIG 198 (233)
T ss_dssp ESSHHHHHHHHHTTCEEEEEGGGSCCHH
T ss_pred eCCHHhHHHHHHCCCEEEEEeCCCCchH
Confidence 888 4444445555 5566544443
No 500
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=43.90 E-value=81 Score=23.44 Aligned_cols=88 Identities=13% Similarity=0.049 Sum_probs=49.4
Q ss_pred chhhhhhhhcEEEEEccccchHHHHHHHHHHHHHHh-hcCcceEEEEcCCc-----chHHHHHHHHHcCC---eEEEecC
Q 046085 105 SLVVKLKRVWFWVRTMSDKLQAADVLLRNYMVDMMD-KRRFGCLVFVSDDS-----DFVEVLQEATLRCL---KTGVAGY 175 (230)
Q Consensus 105 gLa~eLrRAGv~VrtV~dKpqAAD~AL~~~m~~~m~-~r~vdclvLVSDDS-----DF~~lLr~ARer~l---~TVVVGd 175 (230)
.+-..|+..|+.+-.++..+... ...+.+.+. ..-++.+ +.|++. +=..+...++.-|+ .+++|||
T Consensus 93 ~~l~~l~~~g~~~~i~t~~~~~~----~~~~l~~~~l~~~f~~~-~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD 167 (226)
T 3mc1_A 93 ALLSSLKDYGFHLVVATSKPTVF----SKQILEHFKLAFYFDAI-VGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGD 167 (226)
T ss_dssp HHHHHHHHHTCEEEEEEEEEHHH----HHHHHHHTTCGGGCSEE-EEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEES
T ss_pred HHHHHHHHCCCeEEEEeCCCHHH----HHHHHHHhCCHhheeee-eccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECC
Confidence 45677889999998888876531 112212110 1123443 334432 22334444455565 5899999
Q ss_pred C-CCchhhhhhh----ccccccchHHH
Q 046085 176 M-NDGTLKRIAD----RLKWAYNSEVE 197 (230)
Q Consensus 176 ~-~~~aL~r~AD----~leW~~~~e~e 197 (230)
+ +|-...+.|. ++.|.+....+
T Consensus 168 ~~~Di~~a~~aG~~~i~v~~g~~~~~~ 194 (226)
T 3mc1_A 168 REYDVIGALKNNLPSIGVTYGFGSYEE 194 (226)
T ss_dssp SHHHHHHHHTTTCCEEEESSSSSCHHH
T ss_pred CHHHHHHHHHCCCCEEEEccCCCCHHH
Confidence 9 5555556666 66777655444
Done!