Query 046091
Match_columns 423
No_of_seqs 248 out of 2499
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 08:38:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046091.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/046091hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2645 Type I phosphodiestera 100.0 8E-67 1.7E-71 489.4 27.3 378 29-419 19-399 (418)
2 PF01663 Phosphodiest: Type I 100.0 3.7E-40 8E-45 318.5 7.4 319 35-361 1-365 (365)
3 TIGR02335 hydr_PhnA phosphonoa 100.0 3.7E-38 7.9E-43 302.7 17.3 338 31-397 11-404 (408)
4 COG1524 Uncharacterized protei 100.0 5.8E-31 1.2E-35 259.7 12.1 375 30-416 36-446 (450)
5 TIGR03417 chol_sulfatase choli 100.0 2.5E-29 5.5E-34 250.5 19.9 200 31-247 1-292 (500)
6 COG3379 Uncharacterized conser 100.0 3.9E-29 8.4E-34 226.2 18.7 356 32-404 3-456 (471)
7 PRK13759 arylsulfatase; Provis 100.0 2.2E-27 4.8E-32 235.7 20.9 202 30-247 4-307 (485)
8 KOG3731 Sulfatases [Carbohydra 99.9 1.2E-23 2.5E-28 192.8 15.7 273 32-420 34-384 (541)
9 COG3119 AslA Arylsulfatase A a 99.9 1E-22 2.2E-27 201.6 21.4 98 31-139 3-106 (475)
10 PF00884 Sulfatase: Sulfatase; 99.9 3.4E-23 7.3E-28 195.1 14.7 202 33-248 1-251 (308)
11 KOG3867 Sulfatase [General fun 99.9 6.8E-21 1.5E-25 183.5 20.5 213 29-249 26-310 (528)
12 PRK12363 phosphoglycerol trans 99.8 2.3E-18 4.9E-23 172.7 20.2 207 29-247 153-394 (703)
13 PRK03776 phosphoglycerol trans 99.8 4.7E-18 1E-22 170.5 20.9 208 29-248 158-398 (762)
14 COG3083 Predicted hydrolase of 99.8 4.4E-17 9.5E-22 152.5 17.9 192 29-249 256-464 (600)
15 KOG2125 Glycosylphosphatidylin 99.7 4.2E-18 9.2E-23 164.7 9.6 225 2-250 19-256 (760)
16 KOG2126 Glycosylphosphatidylin 99.7 2.1E-17 4.5E-22 164.1 11.7 188 33-251 59-267 (895)
17 PRK09598 lipid A phosphoethano 99.7 5.9E-15 1.3E-19 146.1 20.1 187 29-248 220-442 (522)
18 PRK10649 hypothetical protein; 99.7 1.8E-15 3.9E-20 152.2 16.2 188 30-248 234-465 (577)
19 KOG2124 Glycosylphosphatidylin 99.6 2.4E-15 5.1E-20 149.5 12.0 209 31-250 42-262 (883)
20 PRK05362 phosphopentomutase; P 99.5 1.3E-13 2.9E-18 130.4 14.2 109 123-247 224-333 (394)
21 TIGR01696 deoB phosphopentomut 99.5 3.1E-13 6.8E-18 126.6 14.4 108 123-247 217-325 (381)
22 PRK05434 phosphoglyceromutase; 99.5 3.8E-13 8.3E-18 131.4 15.4 108 133-249 332-445 (507)
23 PRK11598 putative metal depend 99.5 9.3E-13 2E-17 131.0 18.3 188 31-248 232-458 (545)
24 cd00016 alkPPc Alkaline phosph 99.5 2.6E-12 5.5E-17 122.8 18.2 78 165-249 231-308 (384)
25 PRK11560 phosphoethanolamine t 99.5 3.7E-12 8E-17 126.7 19.7 189 31-248 246-468 (558)
26 PF01676 Metalloenzyme: Metall 99.4 1.2E-13 2.7E-18 125.4 4.6 71 170-249 128-198 (252)
27 PRK12383 putative mutase; Prov 99.4 6.5E-12 1.4E-16 119.0 13.2 71 167-247 271-341 (406)
28 TIGR01307 pgm_bpd_ind 2,3-bisp 99.4 1.4E-11 3E-16 119.6 15.7 75 165-248 364-438 (501)
29 PLN02538 2,3-bisphosphoglycera 99.3 1.7E-10 3.6E-15 112.5 16.2 75 165-248 403-477 (558)
30 PF02995 DUF229: Protein of un 99.1 2.6E-09 5.6E-14 106.2 15.2 196 29-248 123-345 (497)
31 COG1368 MdoB Phosphoglycerol t 99.0 5.6E-09 1.2E-13 107.6 15.4 203 28-248 257-494 (650)
32 COG1785 PhoA Alkaline phosphat 98.8 1.3E-07 2.9E-12 90.6 16.2 80 164-250 279-358 (482)
33 COG1015 DeoB Phosphopentomutas 98.8 9.4E-08 2E-12 87.4 12.6 111 123-249 227-338 (397)
34 PF08665 PglZ: PglZ domain; I 98.7 1.2E-08 2.7E-13 87.8 4.2 56 33-92 1-58 (181)
35 PRK10518 alkaline phosphatase; 98.6 1.9E-06 4.1E-11 83.8 16.3 78 165-249 324-401 (476)
36 COG0696 GpmI Phosphoglyceromut 98.5 1E-06 2.2E-11 83.6 11.9 73 168-249 374-446 (509)
37 TIGR02687 conserved hypothetic 98.3 1.3E-06 2.8E-11 91.5 8.6 60 185-250 569-631 (844)
38 smart00098 alkPPc Alkaline pho 98.3 6.2E-06 1.4E-10 79.4 12.4 79 165-250 234-312 (419)
39 COG2194 Predicted membrane-ass 98.3 1.1E-05 2.4E-10 80.6 13.9 190 31-249 230-458 (555)
40 KOG4513 Phosphoglycerate mutas 98.2 2.3E-05 5E-10 71.8 12.4 70 170-248 392-461 (531)
41 PRK04024 cofactor-independent 98.0 2.9E-05 6.3E-10 75.1 8.9 71 166-247 279-349 (412)
42 PF00245 Alk_phosphatase: Alka 97.6 5.6E-05 1.2E-09 73.5 4.5 76 166-248 238-313 (421)
43 TIGR00306 apgM 2,3-bisphosphog 97.6 0.00019 4.2E-09 69.1 8.1 69 169-248 276-344 (396)
44 PRK04200 cofactor-independent 97.3 0.00084 1.8E-08 64.8 8.2 71 167-247 270-341 (395)
45 TIGR02535 hyp_Hser_kinase prop 97.3 0.001 2.2E-08 64.3 8.2 71 168-247 272-343 (396)
46 TIGR03397 acid_phos_Burk acid 97.1 0.0074 1.6E-07 59.1 12.6 58 182-247 341-399 (483)
47 PRK04135 cofactor-independent 96.9 0.0026 5.7E-08 60.8 7.2 68 167-248 266-333 (395)
48 COG3635 Predicted phosphoglyce 96.7 0.0042 9.1E-08 57.8 6.8 69 167-247 283-351 (408)
49 PF04185 Phosphoesterase: Phos 96.6 0.0088 1.9E-07 57.9 8.7 175 48-247 118-309 (376)
50 KOG4126 Alkaline phosphatase [ 96.4 0.011 2.4E-07 57.2 7.4 76 166-249 326-401 (529)
51 PF07394 DUF1501: Protein of u 90.9 0.95 2.1E-05 44.1 8.0 61 186-250 246-306 (392)
52 TIGR03396 PC_PLC phospholipase 90.8 2 4.3E-05 44.7 10.2 175 49-246 145-339 (690)
53 COG3635 Predicted phosphoglyce 90.1 0.31 6.8E-06 45.7 3.6 37 31-67 2-47 (408)
54 PF11658 DUF3260: Protein of u 87.9 21 0.00046 35.4 14.2 192 34-252 197-414 (518)
55 PRK04135 cofactor-independent 84.9 1.8 3.9E-05 41.8 5.4 55 32-86 7-70 (395)
56 TIGR02535 hyp_Hser_kinase prop 84.4 1.6 3.5E-05 42.4 5.0 51 34-86 2-64 (396)
57 PRK04200 cofactor-independent 83.3 2 4.4E-05 41.7 5.1 51 34-86 2-64 (395)
58 PRK04024 cofactor-independent 83.2 2.2 4.8E-05 41.7 5.4 54 33-86 3-66 (412)
59 TIGR03368 cellulose_yhjU cellu 81.6 38 0.00083 33.5 12.8 193 34-252 195-411 (518)
60 TIGR00306 apgM 2,3-bisphosphog 68.8 5.8 0.00013 38.6 3.8 49 36-86 1-61 (396)
61 smart00098 alkPPc Alkaline pho 64.3 10 0.00022 37.1 4.5 90 33-139 1-104 (419)
62 COG3885 Uncharacterized conser 59.2 19 0.00042 31.6 4.7 34 211-249 143-176 (261)
63 PF00245 Alk_phosphatase: Alka 59.0 2.7 5.8E-05 41.3 -0.5 90 33-140 2-104 (421)
64 TIGR03397 acid_phos_Burk acid 54.6 4.8 0.0001 39.9 0.5 42 49-92 132-173 (483)
65 PF05991 NYN_YacP: YacP-like N 49.5 16 0.00034 30.8 2.8 31 215-248 77-107 (166)
66 PRK13366 protocatechuate 4,5-d 48.0 32 0.00068 31.9 4.7 35 212-248 28-62 (284)
67 PF14606 Lipase_GDSL_3: GDSL-l 48.0 73 0.0016 27.2 6.5 137 63-243 8-144 (178)
68 PRK13364 protocatechuate 4,5-d 45.3 30 0.00066 31.9 4.1 33 214-248 30-62 (278)
69 PRK05434 phosphoglyceromutase; 43.9 23 0.00049 35.7 3.3 43 366-411 461-504 (507)
70 cd07364 PCA_45_Dioxygenase_B S 41.4 42 0.00091 30.9 4.4 34 213-248 29-62 (277)
71 COG0696 GpmI Phosphoglyceromut 40.6 39 0.00086 33.3 4.2 58 32-89 3-73 (509)
72 cd07950 Gallate_Doxase_N The N 40.2 42 0.0009 31.0 4.2 34 214-249 30-63 (277)
73 PLN02538 2,3-bisphosphoglycera 39.4 40 0.00086 34.2 4.2 49 363-411 502-555 (558)
74 cd07369 PydA_Rs_like PydA is a 37.1 58 0.0013 30.8 4.7 33 213-247 27-59 (329)
75 PF05827 ATP-synt_S1: Vacuolar 36.9 60 0.0013 29.9 4.8 51 185-245 127-177 (282)
76 COG4102 Uncharacterized protei 36.3 1.9E+02 0.0042 27.4 7.7 64 182-249 264-328 (418)
77 PRK13365 protocatechuate 4,5-d 35.9 50 0.0011 30.5 4.0 33 214-248 30-62 (279)
78 PF00231 ATP-synt: ATP synthas 35.7 33 0.00072 31.8 2.9 18 233-250 73-90 (290)
79 cd07949 PCA_45_Doxase_B_like_1 35.0 48 0.001 30.5 3.8 33 214-248 30-62 (276)
80 PRK05621 F0F1 ATP synthase sub 33.7 49 0.0011 30.6 3.6 14 238-251 77-90 (284)
81 TIGR01307 pgm_bpd_ind 2,3-bisp 31.6 40 0.00086 33.9 2.8 44 365-410 453-498 (501)
82 TIGR01146 ATPsyn_F1gamma ATP s 30.3 63 0.0014 29.9 3.8 14 238-251 78-91 (287)
83 cd07368 PhnC_Bs_like PhnC is a 29.1 87 0.0019 28.9 4.4 36 212-249 26-61 (277)
84 cd07366 3MGA_Dioxygenase Subun 28.1 68 0.0015 30.4 3.6 29 217-247 71-99 (328)
85 cd07367 CarBb CarBb is the B s 27.8 1E+02 0.0022 28.3 4.6 35 212-248 22-56 (268)
86 PF12249 AftA_C: Arabinofurano 27.5 1.7E+02 0.0037 24.7 5.3 53 191-249 12-64 (178)
87 TIGR02049 gshA_ferroox glutama 26.6 3.5E+02 0.0075 26.1 7.7 63 184-249 208-270 (403)
88 COG4077 Uncharacterized protei 26.4 1.2E+02 0.0025 24.3 3.9 33 205-237 70-102 (156)
89 PRK13373 putative dioxygenase; 24.7 1.3E+02 0.0028 28.5 4.7 35 213-249 27-61 (344)
90 TIGR03323 alt_F1F0_F1_gam alte 23.7 1E+02 0.0022 28.5 3.9 13 238-250 74-86 (285)
91 cd01836 FeeA_FeeB_like SGNH_hy 23.3 4.3E+02 0.0093 22.1 7.6 50 182-243 64-113 (191)
92 PF02739 5_3_exonuc_N: 5'-3' e 22.7 1.5E+02 0.0033 24.9 4.4 32 216-250 109-140 (169)
93 PRK13424 F0F1 ATP synthase sub 22.3 1E+02 0.0022 28.6 3.6 14 238-251 79-92 (291)
94 PRK13370 mhpB 3-(2,3-dihydroxy 21.5 1.7E+02 0.0036 27.6 4.9 35 212-248 22-56 (313)
95 PRK13427 F0F1 ATP synthase sub 21.5 1.2E+02 0.0026 28.2 3.9 14 238-251 79-92 (289)
96 PRK13423 F0F1 ATP synthase sub 20.7 1.1E+02 0.0023 28.5 3.4 14 238-251 78-91 (288)
No 1
>KOG2645 consensus Type I phosphodiesterase/nucleotide pyrophosphatase [General function prediction only]
Probab=100.00 E-value=8e-67 Score=489.45 Aligned_cols=378 Identities=48% Similarity=0.866 Sum_probs=336.6
Q ss_pred cCCCCcEEEEEECCCCCCCCCCCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCCCC
Q 046091 29 KLEKPVVLLVSSDGFRFGYQFKTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYTGD 108 (423)
Q Consensus 29 ~~~~~~vv~I~iDgl~~d~~~~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~~ 108 (423)
...+|+|++|++||+|++|+.+..+|+|++|++.|+...+ +.++|||.|.|+|.||+||+||..|||++|.++|+.++.
T Consensus 19 ~~~~p~lllis~DGFr~~yl~~~~~p~i~~l~~~gv~~~~-~~pvFpT~TfPNhySivTGlype~HGIv~N~~~Dp~~~~ 97 (418)
T KOG2645|consen 19 GSTHPKLLLISFDGFRADYLYKVLTPNIHKLASCGVWVTY-VIPVFPTKTFPNHYSIVTGLYPESHGIVGNYFFDPKTNK 97 (418)
T ss_pred cCCCCCEEEEEecccchhhccCccCccHHHHHhccccccE-EEecCcccccCCcceeeecccchhceeeceeeecccccc
Confidence 3356799999999999999999999999999999999985 999999999999999999999999999999999999999
Q ss_pred eeecC---CCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCCCCCCCCCcccccCCCCCChHHHHHHHHhhccCCCCCC
Q 046091 109 TFTMA---SHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKKGSWNCPKGFCMNYNGSVPFEDRVDTVLSYFDLPSSEI 185 (423)
Q Consensus 109 ~~~~~---~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (423)
.|... ..++.||.++|||.++.++|.++++++||+++....+| ...++..++...+++++++.+++ +++..+++
T Consensus 98 ~F~~~~~~~~~~~ww~~ePiW~t~~~~~~kaa~~~wpg~~v~~~~~--~~~~~~~~n~~~~~~~~~~~i~~-~~~~~~e~ 174 (418)
T KOG2645|consen 98 EFDLFTNSDLEPFWWNGEPIWVTARKQGRKVATFFWPGCEVEIHGY--IPDPYDIYNQSVPLEERADTVLD-LDLPEKER 174 (418)
T ss_pred ccccCCCccccccccCCCcchhhhhhcCCceeEEecCCcccccccc--cccccccccccccHHHHHHHHhc-cccccccC
Confidence 88877 47889999999999988899999999999999888777 45566788999999999999988 77778899
Q ss_pred CcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCCCCCCcEEEcccccccc
Q 046091 186 PSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVGTCDKKLIFLDDLASWI 265 (423)
Q Consensus 186 p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~~~~~~~~~l~~~l~~~ 265 (423)
|+|+.+|+.++|..||.+|+.+++..++++.+|..|+.|++.|+++++.++++|||+|||||++++.++.+.++.+..
T Consensus 175 p~l~~~Y~~~pD~~gh~~Gp~~~~v~~~l~~vD~~i~~L~~~Lk~r~L~~~vNvIi~SDHGM~~~~~~~~~~~d~l~~-- 252 (418)
T KOG2645|consen 175 PDLLLLYVEEPDHSGHRYGPDSPEVEKALKEVDDFIGYLIKGLKDRNLFEDVNVIIVSDHGMTDICDKKIIWVDYLPD-- 252 (418)
T ss_pred CCceEEeccCCCccccccCCCcHHHHHHHHHHHHHHHHHHHHHHHccccccceEEEeecCCccccccceeehhhhhhh--
Confidence 999999999999999999999999999999999999999999999999999999999999999985445555555532
Q ss_pred cCCcceeeccCceeEEeCCCCCChHHHHHHHHhhhhcCcccCCCceEEEecCCCCccccccCCCCCCCcEEEccCCeEEe
Q 046091 266 EIPAEWVQSYSPLLAIRPPAGYNPSDIVEKMNEGLKSGKVENGKNLKVYLKGELPSRLHYAASDRIPPIIGLIEEGFKVE 345 (423)
Q Consensus 266 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~ 345 (423)
...+....++...|++......++++..|.+ ..... ..+.||+++++|+|+||..++|+++|++++++||.+.
T Consensus 253 --~~~~~~~~gp~~~i~~~~~~~~~ev~~~l~~----~~~~~-~~~kvy~k~dlP~r~hy~~~~ri~~i~l~~d~g~sv~ 325 (418)
T KOG2645|consen 253 --LVSTVVDEGPVARIRPKKDEIVKEVYANLSC----AKPEH-EHVKVYLKEDLPKRLHYKKSDRIGPIVLLADPGWSVV 325 (418)
T ss_pred --hhhhhcccccceEEEecccccHHHHHHhhhc----cCCCc-cceeccccccCchhhcccccccCCceEEEecCcEEEE
Confidence 3345556778888888443344555555443 33222 6799999999999999999999999999999999999
Q ss_pred cccCCCCcCCCCCCCCCCCCchHhHHhhhCCCCCCCCccCCccchhHHHHHHHhhCCCCCCCCCCCcccccccc
Q 046091 346 QKRTNRKECGGAHGYDNAVFSMRTIFIGHGPQFARGRKVPSFENVQIYNVITSILKIDGAPNNGSSSFPLSILL 419 (423)
Q Consensus 346 ~~~~~~~~~~g~HG~~~~~~~m~~~f~~~Gp~i~~~~~~~~~~~~Diapti~~llgi~~~~~~G~~~~~~~~l~ 419 (423)
.+........|.|||++...+|+++|+|+||.||++..+++++++||++.+|++|||++.|+||+.+.+.++|+
T Consensus 326 ~~~~~~~~~~g~hGydn~~~~M~~if~a~Gp~F~~~~~~~pfenv~vyn~~~~ll~l~~~pnNGt~~~~~~lL~ 399 (418)
T KOG2645|consen 326 KSETDDPEALGDHGYDNNFSDMRTIFVGHGPSFKKNTKVPPFENVEIYNLLCDLLGLRPAPNNGTHGFLRSLLK 399 (418)
T ss_pred eccccchhhhccccccccchhhhhhhhhcccccCCCcccCCccceehhhhhhhhcCCccCCCCCCccchhhhhc
Confidence 88776666789999999999999999999999999999999999999999999999999999999999999997
No 2
>PF01663 Phosphodiest: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro: IPR002591 This family consists of phosphodiesterases, including human plasma-cell membrane glycoprotein PC-1 / alkaline phosphodiesterase I / nucleotide pyrophosphatase (nppase). These enzymes catalyse the cleavage of phosphodiester and phosphosulphate bonds in NAD, deoxynucleotides and nucleotide sugars []. Another member of this family is ATX an autotaxin, tumor cell motility-stimulating protein which exhibits type I phosphodiesterases activity []. The alignment encompasses the active site [, ]. Also present within this family is 60 kDa Ca2+-ATPase from Myroides odoratus []. This signature also hits a number of ethanolamine phosphate transferase involved in glycosylphosphatidylinositol-anchor biosynthesis.; GO: 0003824 catalytic activity; PDB: 2XRG_A 2XR9_A 3T02_A 3T01_A 3SZZ_A 3SZY_A 3T00_A 3NKM_A 3NKN_A 3NKR_A ....
Probab=100.00 E-value=3.7e-40 Score=318.46 Aligned_cols=319 Identities=34% Similarity=0.624 Sum_probs=217.8
Q ss_pred EEEEEECCCCCCCCCC--CCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCCCCe--e
Q 046091 35 VLLVSSDGFRFGYQFK--TSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYTGDT--F 110 (423)
Q Consensus 35 vv~I~iDgl~~d~~~~--~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~~~--~ 110 (423)
||+|++||++++++.+ ..+|||++|+++|+++.+ +.++||+.|.|+|+||+||.+|.+|||++|.++++..... +
T Consensus 1 vv~i~iDGl~~~~l~~~~~~~p~l~~l~~~G~~~~~-~~s~~Ps~T~~~~~si~TG~~P~~HGi~~~~~~~~~~~~~~~~ 79 (365)
T PF01663_consen 1 VVVIGIDGLRPDLLDRYIGNLPNLKRLAEEGVYGPN-LRSVFPSTTAPNWASILTGAYPEEHGIIGNYWYDPKTGKESTF 79 (365)
T ss_dssp EEEEEETT-BHHHHHHHHTSSHHHHHHHHHSEEECE-EE-SSSBSHHHHHHHHHHSS-HHHHS--SSCEEETTTTEEECE
T ss_pred cEEEEEeCCCHHHHHhHhccCHHHHHHHHCCCCCCC-ceecCCCCcccchhhhhcCccccccCCccccccCccccccccc
Confidence 7999999999998776 899999999999999975 8999999999999999999999999999999998877654 3
Q ss_pred ecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCCCCCC----------------CCCccccc-CCCC--CC-----
Q 046091 111 TMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKKGSWN----------------CPKGFCMN-YNGS--VP----- 166 (423)
Q Consensus 111 ~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~-~~~~--~~----- 166 (423)
........+....++|+.++++|.+++.++||.+......+. .|..+... +... .+
T Consensus 80 ~~~~~~~~~~~~~~i~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~ 159 (365)
T PF01663_consen 80 WDELGDSGDVDSPPIWESLAKAGKKVAVFGWPGTHPPYPGLNGILDPSFGTPDTYRYYSPKSLSDELYDGQGDNPLYLAW 159 (365)
T ss_dssp ESSSSGGGCCCCHEHHHHHHHTT-EEEECS-CTTSSHHHCCTCCCCTCTT-EESSTCCCCSCCHHHHHHHC-HHCHSTCH
T ss_pred cccccccccccchhHHHHHHHcCCceeeeccccccccccccccccccccccccccccccccccccchhhccccccccccc
Confidence 333334445566799999999999999999998753321110 01111000 0000 00
Q ss_pred -------hHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEE
Q 046091 167 -------FEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTI 239 (423)
Q Consensus 167 -------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~v 239 (423)
..+.+..+++.+ .++++|+|+++|+..+|..+|.+|+.++++.++++.+|++||+|++.+++.+..++|+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~l--~~~~~pdl~~~~~~~~D~~~H~~g~~s~~~~~~~~~~D~~ig~l~~~l~~~~~~~~~~i 237 (365)
T PF01663_consen 160 FFEQSPELDEWITDAAEYL--IQKERPDLIFVYFPEPDHIGHRYGPDSPEIEDAYRRIDQAIGRLLEALDENGLLEDTNI 237 (365)
T ss_dssp HHSSSHHHHHHHHHHHHHH--HHTTTESEEEEEEECCHHHHHHH-TTSHHHHHHHHHHHHHHHHHHHHHHHTT-TTTEEE
T ss_pred cccchHHHHHHHHHHHHHH--HhhCCCCEEEEEecCCCccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhCCCCceEE
Confidence 011111122221 23567999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCCCCCCCCCcEEEcccccc---cccCCcc---ee-eccCceeEEeCCCCCChHHHHHHHHhhhhcCcccCCCceE
Q 046091 240 VMVGDHGMVGTCDKKLIFLDDLAS---WIEIPAE---WV-QSYSPLLAIRPPAGYNPSDIVEKMNEGLKSGKVENGKNLK 312 (423)
Q Consensus 240 iitsDHG~~~~~~~~~~~l~~~l~---~~~~~~~---~~-~~~~~~~~i~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 312 (423)
||+|||||.+...++.+++++++. .+.++.. .. ...+.+.++++. +.++..+++.+.|.+.. .......
T Consensus 238 iv~SDHG~~~~~~~~~i~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~~~~v~~~L~~~~-~~~~~~~ 313 (365)
T PF01663_consen 238 IVTSDHGMTPVPDEKVIDLNDYLRQNGLLKLDPSDINEDYVGEGRMAYIYVK---DDEEVIDEVYEALKGLQ-DPQPGIK 313 (365)
T ss_dssp EEEES---EEECTTSEEEHHHCCECCCCCHSHGCTCEEECEESBSEEEEEEC---HTTSHHHHHHHHHCTS--STTTTEE
T ss_pred EEEccCcccccCcCceecHHHhhhhhhhhhcccccceeeeeecCceeeEecc---cchhhHHHHHHHHHhhc-cCCCceE
Confidence 999999999886678899988852 1222111 11 344566677766 11223444444444321 1234567
Q ss_pred EEe---cCCCCccccccCCCCCCCcEEEccCCeEEecccC-CCCcCCCCCCCC
Q 046091 313 VYL---KGELPSRLHYAASDRIPPIIGLIEEGFKVEQKRT-NRKECGGAHGYD 361 (423)
Q Consensus 313 v~~---~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~-~~~~~~g~HG~~ 361 (423)
++. +++++++++|. .+|+||+++++++||.+..+.. ......|+|||+
T Consensus 314 ~~~~~~~~~l~~~~~~~-~~r~gdlv~~~~~g~~~~~~~~~~~~~~~g~HG~~ 365 (365)
T PF01663_consen 314 VYLTVPRSDLPERYHYG-SDRSGDLVVIAKPGYSFVTKDTTKEYKPKGMHGYD 365 (365)
T ss_dssp EEEEHHGGGSHGGGTHC-STTS-SEEEEE-TTEEEESHCSTSSSS-EEE-BS-
T ss_pred EEecccHHHHHHHhCCC-CCCcCCEEEEEeCCEEEEeCCCCCCCCCCccCCCC
Confidence 777 66888777776 8899999999999999988764 445667999986
No 3
>TIGR02335 hydr_PhnA phosphonoacetate hydrolase. This family consists of examples of phosphonoacetate hydrolase, an enzyme specific for the cleavage of the C-P bond in phosphonoacetate. Phosphonates are organic compounds with a direct C-P bond that is far less labile that the C-O-P bonds of phosphate attachment sites. Phosphonates may be degraded for phosphorus and energy by broad spectrum C-P lyase encoded by large operon or by specific enzymes for some of the more common phosphonates in nature. This family represents an enzyme from the latter category. It may be found encoded near genes for phosphonate transport and for pther specific phosphonatases.
Probab=100.00 E-value=3.7e-38 Score=302.74 Aligned_cols=338 Identities=22% Similarity=0.265 Sum_probs=232.1
Q ss_pred CCCcEEEEEECCCCCCCCCC----CCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCC
Q 046091 31 EKPVVLLVSSDGFRFGYQFK----TSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYT 106 (423)
Q Consensus 31 ~~~~vv~I~iDgl~~d~~~~----~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~ 106 (423)
.+++||||++||++++++.+ +.+|||++|+++|.... +.++|||+|.|+|+||+||++|.+|||++|.++++..
T Consensus 11 ~~~~vvvi~vDGl~~~~l~~~~~~g~~P~L~~l~~~G~~~~--~~s~~Ps~T~p~~tSi~TG~~P~~HGI~gn~~~dp~~ 88 (408)
T TIGR02335 11 PQRPTVVICVDGCDPEYINRGIADGVAPFIAELTGFGTVLT--ADCVVPSFTNPNNLSIVTGAPPAVHGICGNYYLDQDT 88 (408)
T ss_pred CCCCEEEEEeCCCCHHHHHhhhhcCCCchHHHHHhcCceee--ccCCCCCcccccceeeecCCChhhCceecceEEecCC
Confidence 35679999999999998754 58999999999998764 6889999999999999999999999999999999987
Q ss_pred CCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCCCCCCCCCcc-c-----------------ccCCCC--C-
Q 046091 107 GDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKKGSWNCPKGF-C-----------------MNYNGS--V- 165 (423)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~--~- 165 (423)
+..+.. .+.+|+..+|+|+.++++|.+++.+.++.......++..+... . ..+.+. .
T Consensus 89 ~~~~~~--~~~~~~~~pTi~e~a~~aG~~ta~v~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~g~~~~~~~vg~~~~~ 166 (408)
T TIGR02335 89 GEEIMM--TDAKYLRAPTILGEMSKAGVLTAVVTAKDKLRKVLGHQLKGICFSSEKADQVNLEEHGVENILALVGRPRPD 166 (408)
T ss_pred CceEEE--eChhhhCCchHHHHHHHcCCeEEEEecccccccccCcccccccccccccccccccccchHHHHHHhCCCCCc
Confidence 766544 2467888999999999999999998766432111111111100 0 000000 0
Q ss_pred ----ChHH-HHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEE
Q 046091 166 ----PFED-RVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIV 240 (423)
Q Consensus 166 ----~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~vi 240 (423)
...+ .++.+.+.+ ++++|+|++ +.++|+.+|.+|+.|+++.++++++|+.|++|++. +++||
T Consensus 167 ~~~~~~~~~~~~~a~~~l---~~~~pdlly--l~~~D~~gH~~Gp~S~e~~~~~~~lD~~l~~L~~~--------~~~vv 233 (408)
T TIGR02335 167 VYSADLSLFVLDAGLSLL---TNERPDLMY--LSTSDYVQHKHAPGEPESNAFYAAMDSRFKRYHEQ--------GAIVA 233 (408)
T ss_pred cchHHHHHHHHHHHHHHH---hccCCcEEE--ecCcCccccccCCCCHHHHHHHHHHHHHHHHHHHC--------CCEEE
Confidence 0111 133444444 356899875 57999999999999999999999999999999872 69999
Q ss_pred EECCCCCCCCCC----CcEEEcccccc-cccCC-cc--------eeec---cCceeEEeCCCCCChHHHHHHHHhhhhcC
Q 046091 241 MVGDHGMVGTCD----KKLIFLDDLAS-WIEIP-AE--------WVQS---YSPLLAIRPPAGYNPSDIVEKMNEGLKSG 303 (423)
Q Consensus 241 itsDHG~~~~~~----~~~~~l~~~l~-~~~~~-~~--------~~~~---~~~~~~i~~~~~~~~~~~~~~l~~~l~~~ 303 (423)
|||||||.++.. .+...+++++. ..... .. ++.. .+..+.++..+..+.+++.+.+++
T Consensus 234 vtaDHG~~~~~~~~~~~nv~~l~~~L~~~~g~~~~~~i~~~~~~~V~~~~~~g~~~~~y~~~~~~~~~v~~~l~~----- 308 (408)
T TIGR02335 234 ITADHGMNAKTDAIGRPNILFLQDLLDAQFGAGRARVICPITDPFVRHHGALGSFVRVYLRDPVDIRAMMDFAAG----- 308 (408)
T ss_pred EECCCCCccCcccccCccHHHHHHHHHHHhCCCcceeeecccchhhccccccCCeeeeecCCHHHHHHHHHHHhc-----
Confidence 999999998743 11233333331 11110 01 1211 124566665543333344444432
Q ss_pred cccCCCceEEEecCCCCccccccCCCCCCCcEEEccCCeEEecccCCC------CcCCCCCCCCCCCCchHhHHhhhCCC
Q 046091 304 KVENGKNLKVYLKGELPSRLHYAASDRIPPIIGLIEEGFKVEQKRTNR------KECGGAHGYDNAVFSMRTIFIGHGPQ 377 (423)
Q Consensus 304 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~------~~~~g~HG~~~~~~~m~~~f~~~Gp~ 377 (423)
..+...|+.++++.+.+++ ..+|++|+++++++||.+....... ....++||+++ ||.++|+...|-
T Consensus 309 ---~~gva~V~tr~ea~~~~g~-~~~RsGDvvv~a~~g~~~~~~~~~~~~~~~~~~~~~~HG~~~---e~~vp~~~~~~~ 381 (408)
T TIGR02335 309 ---IAGVEAVLTRSQACQRFEL-PEDREGDFVVLGERLTVLGSRADKHDLSGLGDHPLRSHGGVS---EQKVPFILSRPL 381 (408)
T ss_pred ---CCCHHHHhCHHHHHHhcCC-CCCCcccEEEEecCCEEEeecccccccccccCcCcccCCCcc---cCcCceEEEecc
Confidence 2346688999988776555 4689999999999999877653221 12234999997 688999988775
Q ss_pred CCC---CCccCCccchhHHHHHH
Q 046091 378 FAR---GRKVPSFENVQIYNVIT 397 (423)
Q Consensus 378 i~~---~~~~~~~~~~Diapti~ 397 (423)
-.. .......+|.||+...+
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~ 404 (408)
T TIGR02335 382 VRDYRERAAPGRLRNFDIFDFAL 404 (408)
T ss_pred cchhcccccccccccccHHHHHh
Confidence 321 22234578889877654
No 4
>COG1524 Uncharacterized proteins of the AP superfamily [General function prediction only]
Probab=99.97 E-value=5.8e-31 Score=259.72 Aligned_cols=375 Identities=25% Similarity=0.343 Sum_probs=234.7
Q ss_pred CCCCcEEEEEECCCCCCCCCC--CCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCCC
Q 046091 30 LEKPVVLLVSSDGFRFGYQFK--TSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYTG 107 (423)
Q Consensus 30 ~~~~~vv~I~iDgl~~d~~~~--~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~ 107 (423)
..++++|+|++||+|+|++.+ +.+|++++|+++|..+. .+.+++||.|.|+++||+||.+|..|||++|.++++..+
T Consensus 36 ~~~~klvli~iDgl~~d~~~~~~~~~p~l~~l~~~g~~~~-~~~s~~Pt~T~p~~~tl~TG~~P~~hgi~~N~~~~~~~~ 114 (450)
T COG1524 36 APKKKLVLISIDGLRADVLDRKAGILPFLSSLAENGVHVA-ELISVFPTTTRPRHTTLITGSYPDEHGIVGNILYDPETG 114 (450)
T ss_pred cchheEEEEEEeccChhhhhhhccCchhHHHHHhCCceeE-EEecCCCccccccceeeecccCcchhccccccccCCccc
Confidence 345679999999999997654 88999999999999654 589999999999999999999999999999999999877
Q ss_pred Cee---ecCC-------C-CCcccCCcchhhhHhhcCCcEEE-eecCCCCcCCCCCCCCCcccccCCCCCChHHHHHHHH
Q 046091 108 DTF---TMAS-------H-EPKWWLGEPLWETVTNHGLKAAT-YFWPGSEVKKGSWNCPKGFCMNYNGSVPFEDRVDTVL 175 (423)
Q Consensus 108 ~~~---~~~~-------~-~~~~~~~~~i~~~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (423)
..+ .... . ...|..+.++|......+.+... ..|+...........+. ..............++...
T Consensus 115 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 193 (450)
T COG1524 115 DSVLQFLLDNPTILFPGDDEAGMDVAAPFESLTVSDKLRVAVDLVWDVPILHYLHIGGPD-HITMRRFLIDEDDNIKPGY 193 (450)
T ss_pred chHHHHHhcCCceecCcccccccccCccceeeecCCcccccccccCccccccceeecCCc-ccccChhhhhhHHHHHHHh
Confidence 553 1110 0 11223344555444444444333 23443332211000000 0000000000111121111
Q ss_pred hhcc--------------CCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE
Q 046091 176 SYFD--------------LPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVM 241 (423)
Q Consensus 176 ~~~~--------------~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~vii 241 (423)
..++ +.++.+|+++++|+..+|..+|.+|+.++++..+++.+|..++++++.+++.++.+++++||
T Consensus 194 ~~~~~~~~d~~~~~~~~~~~~~~~p~~~l~~~~~iD~~~H~~G~~s~~~~~~~~~~d~~l~~ll~~l~~~~~~~~~~~ii 273 (450)
T COG1524 194 DYISEHFLDSLLFLDSVLLLDRADPDLLLVYLPNIDAIGHKYGPDSPEYAEAVREVDSLLGELLELLKKRGLYEEYLVII 273 (450)
T ss_pred ccccccCCcceeeeccccCccccCcchhhhhccccchhhhccCCCCHHHHhhhhhhhhhHHHHHHHHHhhccccceEEEE
Confidence 1111 11234899999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCCCCCCCCcEEEcccccccccCCcceeec---cCceeEEeCCCCCChHHHHHHHHhhhhcCcccCCCceEEEecCC
Q 046091 242 VGDHGMVGTCDKKLIFLDDLASWIEIPAEWVQS---YSPLLAIRPPAGYNPSDIVEKMNEGLKSGKVENGKNLKVYLKGE 318 (423)
Q Consensus 242 tsDHG~~~~~~~~~~~l~~~l~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~v~~~~~ 318 (423)
+|||||.+...+..++++.+.. ...+... .+....+.-+.......+...+...... ....++.+..
T Consensus 274 ~sDHG~~~~~~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~ 343 (450)
T COG1524 274 TSDHGMSPLGVHGIIYLNELLE----EKGIFTLLVLYGGPGEVDLPDPGLIRWIYSLLLDISDS------LISEILTKLS 343 (450)
T ss_pred ecccccchhhhhhhhhHHHhhh----ccceEEEeeecCcceEEEecCcchhHHHHHHHhhhhhh------hHHHHhhhhh
Confidence 9999999654455566665531 1111111 1222222222222333444443322100 0113333444
Q ss_pred CCccccccCCCCCCCcEEEccCCeEE----ecccCCCCcCCCCCCCCCCCCchHhHHhhhCCCCCCCC-ccCCccchhHH
Q 046091 319 LPSRLHYAASDRIPPIIGLIEEGFKV----EQKRTNRKECGGAHGYDNAVFSMRTIFIGHGPQFARGR-KVPSFENVQIY 393 (423)
Q Consensus 319 ~~~~~~~~~~~~~~~i~~~~~~g~~~----~~~~~~~~~~~g~HG~~~~~~~m~~~f~~~Gp~i~~~~-~~~~~~~~Dia 393 (423)
++.+.++.....+.........++.. ...........+.||+.+..+.++.+|+..|++++.+. .+......+++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (450)
T COG1524 344 IPKRNSFGIGELIIWAEFSVHFLFVTEAADFGFARKSLELLGTHGFSPLLPLFRVLFIISGPGFANGKTLILLAGLHDIL 423 (450)
T ss_pred hhHhhhcCCCceeecccccccccchhhhhccccccccccccceecCCccChhhhheeeeeccccccceeeeccccccccc
Confidence 44444433322221111111122210 01112234557899999999999999999999999875 55677899999
Q ss_pred HHHHHhhCCCCCCCCCCCccccc
Q 046091 394 NVITSILKIDGAPNNGSSSFPLS 416 (423)
Q Consensus 394 pti~~llgi~~~~~~G~~~~~~~ 416 (423)
||++...++.+....+.....+.
T Consensus 424 p~~~~~~~~~~~~~~~~~~~~~~ 446 (450)
T COG1524 424 PTILAVSGLEPGEIWGILLALLI 446 (450)
T ss_pred ccchhhccCCcccccChhHHHHH
Confidence 99999999998777776655444
No 5
>TIGR03417 chol_sulfatase choline-sulfatase.
Probab=99.97 E-value=2.5e-29 Score=250.49 Aligned_cols=200 Identities=19% Similarity=0.238 Sum_probs=137.4
Q ss_pred CCCcEEEEEECCCCCCCC----C--CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCC
Q 046091 31 EKPVVLLVSSDGFRFGYQ----F--KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDP 104 (423)
Q Consensus 31 ~~~~vv~I~iDgl~~d~~----~--~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~ 104 (423)
++||||+|++|++|++.+ + ...||||++|+++|+.|+|++++ .+.|.|+++||+||+||.+||+..|....+
T Consensus 1 ~rPNIllI~~Dd~r~d~lg~~G~~~~~~TPnLD~LA~eGv~F~nay~~--~p~C~PSRaSllTG~yp~~~G~~~~~~~l~ 78 (500)
T TIGR03417 1 TRPNILILMADQLNGTLLPDYGPARWLHAPNLKRLAARSVVFDNAYCA--SPLCAPSRASFMSGQLPSRTGAYDNAAEFP 78 (500)
T ss_pred CCCeEEEEEeCCCCccccccCCCCCcCCCCcHHHHHHhCceecccccC--CCccHHHHHHHHHCCCHHhcCcccchhhcC
Confidence 479999999999999843 2 24799999999999999999977 579999999999999999999987642111
Q ss_pred CCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEee-cCC--------CCcC--------CCCC----CCCC---ccccc
Q 046091 105 YTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYF-WPG--------SEVK--------KGSW----NCPK---GFCMN 160 (423)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~-~~~--------~~~~--------~~~~----~~~~---~~~~~ 160 (423)
. ...++.+.|+++||.|+.+. |.- .... ...| .... .+...
T Consensus 79 ~---------------~~~tl~~~L~~aGY~T~~~GK~H~~~~~~~~GF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (500)
T TIGR03417 79 S---------------DIPTYAHYLRRAGYRTALSGKMHFCGPDQLHGFEERLTTDIYPADFGWTPDWRKPGERIDWYHN 143 (500)
T ss_pred c---------------CCCCHHHHHHHCCCeEEEeccccccCCccccCcccccccccCccccCCCccccccccccccccc
Confidence 0 12578899999999998752 110 0000 0000 0000 00000
Q ss_pred C-----CC------CCChH-HHHHHHHhhccC---CCCCCCcEEEEcCCCCCCCCCc-------CC--------------
Q 046091 161 Y-----NG------SVPFE-DRVDTVLSYFDL---PSSEIPSFMTLYFEDPDHQGHK-------VG-------------- 204 (423)
Q Consensus 161 ~-----~~------~~~~~-~~~~~~~~~~~~---~~~~~p~~~~~~~~~~d~~~h~-------~g-------------- 204 (423)
. .+ ...+. ...+.+.+++.. ...++|+|+++.+..+|.+-.. |.
T Consensus 144 ~~~~~~~g~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~kPFFl~vs~~~PH~P~~~p~~y~~~y~~~~~~~p~~~~~~~ 223 (500)
T TIGR03417 144 MGSVTGAGPCERTNQLDYDDEVAFHARQKLYDLARGKDARPFCLTVSFTHPHDPYVIRRKYWDLYEDCEILMPEVAIPYA 223 (500)
T ss_pred ccccccCCcCcccccccCCHHHHHHHHHHHHHHhhccCCCCeEEEecCCCCcCCCcCCHHHHhhcCcccCCCCCCCCccc
Confidence 0 00 00111 234455555532 1356899999999999965211 00
Q ss_pred ---C---------------CC--------HHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCC
Q 046091 205 ---P---------------DD--------PEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGM 247 (423)
Q Consensus 205 ---~---------------~s--------~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~ 247 (423)
+ .+ ..|.+++.++|.+||+|++.|++.|++|||+||||||||.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~v~~~D~~iG~il~~L~~~g~~dnTivvf~sDHG~ 292 (500)
T TIGR03417 224 EQDPHSQRLLDACDLWNFPITDEQIRRARRAYFGAISYLDDKIGELLQTLEETRQADDTIVLFTSDHGD 292 (500)
T ss_pred ccChhhhhhhhhhccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCcEEEEECCCch
Confidence 0 01 1368899999999999999999999999999999999996
No 6
>COG3379 Uncharacterized conserved protein [Function unknown]
Probab=99.97 E-value=3.9e-29 Score=226.25 Aligned_cols=356 Identities=19% Similarity=0.231 Sum_probs=230.4
Q ss_pred CCcEEEEEECCCCCCCCC--CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCCCCe
Q 046091 32 KPVVLLVSSDGFRFGYQF--KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYTGDT 109 (423)
Q Consensus 32 ~~~vv~I~iDgl~~d~~~--~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~~~ 109 (423)
-.++++|++||..+..++ +..+|||++|+++|++-. +.|.+|+.|.|+|.||+||..|.+|||++.... +.+..
T Consensus 3 ~~K~~liGlDgvp~sl~~~f~~~lpnl~~Lm~~~s~G~--l~S~iPpIT~~~W~sl~TG~~PGe~GiygF~~R--kg~sy 78 (471)
T COG3379 3 DRKTLLIGLDGVPPSLFRQFRDNLPNLNKLMKNGSFGK--LESGIPPITPAAWPSLFTGYNPGETGIYGFRHR--KGNSY 78 (471)
T ss_pred cceEEEEEeCCCCHHHHHHHhhhhhHHHHHHHhccccc--ccccCCCcchhhHHHHhhccCCccccceeeecc--cCCcc
Confidence 457999999999997654 467999999999999874 899999999999999999999999999995433 22222
Q ss_pred eecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCC--CC--------------CCCCCccc--------ccCCCCC
Q 046091 110 FTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKK--GS--------------WNCPKGFC--------MNYNGSV 165 (423)
Q Consensus 110 ~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~--~~--------------~~~~~~~~--------~~~~~~~ 165 (423)
-..-...++|.+..++|+.+..+|++++++..|.+-... .. +.+|+... ..+.-..
T Consensus 79 ~~~yva~Ss~vk~~~iWD~L~~kG~k~~V~~vP~tyPpk~i~g~lvS~f~tP~~~~~~a~P~e~~~eI~~t~~~e~vfdv 158 (471)
T COG3379 79 SEPYVAHSSTVKEDPIWDLLGKKGKKSVVAGVPPTYPPKRIKGNLVSGFLTPDKSKAKAYPPELKDEIENTTGNEYVFDV 158 (471)
T ss_pred CceecccccccccccHHHHHhhcCceEEEEeCCCCCCCcccccceeeeecCCCccccccCCHHHHHHHHhccccceeeec
Confidence 121123455678899999999999999998877552111 01 11111110 0010000
Q ss_pred -----ChHHH-----------HHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCC----CC-----------HHHHHHH
Q 046091 166 -----PFEDR-----------VDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGP----DD-----------PEITEAV 214 (423)
Q Consensus 166 -----~~~~~-----------~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~----~s-----------~~~~~~~ 214 (423)
..+.. .+.+..++ ..+.+|+++..+..+|+..|.++. .+ ....+-+
T Consensus 159 ~~~~edk~~~i~d~~~~~~~~k~~v~~~~---~~k~wD~~~~v~~gTDRv~H~~w~y~dp~H~lypg~~n~yEnvi~eyy 235 (471)
T COG3379 159 EYHDEDKDIFIEDLWENTESRKEVVKEYL---SPKEWDCFGFVMIGTDRVHHALWKYLDPEHPLYPGEQNKYENVIPEYY 235 (471)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhh---CcccccceeEEEEehhHHhhhhhhhcCccccCCcccCchHhHHHHHHH
Confidence 00000 11222333 234589998889999998887542 11 2235678
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCCCCCCcEEEccccc---ccccC------------------Ccceee
Q 046091 215 ARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVGTCDKKLIFLDDLA---SWIEI------------------PAEWVQ 273 (423)
Q Consensus 215 ~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~~~~~~~~~l~~~l---~~~~~------------------~~~~~~ 273 (423)
..+|+.||.+++.+.- ++|.++|.||||+... ...+.++.|+ +++++ ..+|.+
T Consensus 236 ~LvD~~IG~~~~~i~~----~e~~l~vvSDHGf~s~--~g~f~lnrWL~~~GyL~l~~~p~~l~~Gi~~~~~~~~idw~r 309 (471)
T COG3379 236 SLVDKYIGLKLEIIGF----EETYLTVVSDHGFKSN--YGLFALNRWLAEEGYLSLKDNPKGLDHGILKDLLAKKIDWKR 309 (471)
T ss_pred HHHHHHHHHHHHhccc----cceEEEEEeccccccc--hhhHHHHHHHHhcCeeeeccCcccCCccchhhhhhhhhhhhh
Confidence 8899999999998873 7899999999999754 2344455544 12211 112332
Q ss_pred cc----C-c--eeEE--eCCC------CCChHHHHHHHHhhhhcCcccCCC--ceEEEecCCCCccccccCCCCCCCcEE
Q 046091 274 SY----S-P--LLAI--RPPA------GYNPSDIVEKMNEGLKSGKVENGK--NLKVYLKGELPSRLHYAASDRIPPIIG 336 (423)
Q Consensus 274 ~~----~-~--~~~i--~~~~------~~~~~~~~~~l~~~l~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~i~~ 336 (423)
.. | . -+++ +.++ ..+.++++++|...|++.+...+. .++||.+++++..- ....||+++
T Consensus 310 t~a~~~Gg~~sri~iN~~gRE~~Giv~~ke~~~vi~elt~~l~ki~~Pdg~~~~~~V~~~~ely~~d----r~~~pDlmV 385 (471)
T COG3379 310 TKAYYWGGGYSRIYINLEGREPRGIVGKKEFDKVIDELTINLEKIEGPDGEEVIFRVYYPEELYPGD----RGAGPDLMV 385 (471)
T ss_pred hheeccCCceeEEEEeccccccccccchhHHHHHHHHHHHHHHhccCCCCceeEEEEeccccCCccc----cccCCCcEE
Confidence 21 1 1 1222 2221 124678888888888876544443 46999999985421 222567765
Q ss_pred -EccCCeEEecccCCCC--cCCCCCCCCCCCCchHhHHhhhCCCCCCCCccCCccchhHHHHHHHhhCCCC
Q 046091 337 -LIEEGFKVEQKRTNRK--ECGGAHGYDNAVFSMRTIFIGHGPQFARGRKVPSFENVQIYNVITSILKIDG 404 (423)
Q Consensus 337 -~~~~g~~~~~~~~~~~--~~~g~HG~~~~~~~m~~~f~~~Gp~i~~~~~~~~~~~~Diapti~~llgi~~ 404 (423)
+.+.+|.+........ ...-.||.++..+...++|-..||.++.+.....+++.||||||+.|.||+.
T Consensus 386 ~idn~~~~i~~~i~~Pt~~l~~~~~gp~~a~H~~~gi~~~~~~~~~~~~k~~s~~IyDvaPTIL~L~gi~~ 456 (471)
T COG3379 386 YIDNLSFSIAGTIGKPTIYLRENDYGPDTADHSYYGIFDINGPIIKDGKKQSSVSIYDVAPTILKLYGINC 456 (471)
T ss_pred ecCCCCcccccccCCCccccccCCCCCCccccCccccccccccchhccccccceeeEeechHHHHHhCCCC
Confidence 4566887655432211 1112355555555555899999999999876677899999999999999984
No 7
>PRK13759 arylsulfatase; Provisional
Probab=99.95 E-value=2.2e-27 Score=235.68 Aligned_cols=202 Identities=19% Similarity=0.279 Sum_probs=139.7
Q ss_pred CCCCcEEEEEECCCCCCCCC-----CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCC
Q 046091 30 LEKPVVLLVSSDGFRFGYQF-----KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDP 104 (423)
Q Consensus 30 ~~~~~vv~I~iDgl~~d~~~-----~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~ 104 (423)
.++||||+|++|++|++.+. ...||||++|+++|+.|++++++ .+.|.|+++||+||+||.+||+.+|....+
T Consensus 4 ~~rPNIl~I~~Ddlr~d~l~~~G~~~~~TPnld~La~~G~~F~nay~~--~p~c~psr~sl~TG~yp~~~g~~~~~~~~~ 81 (485)
T PRK13759 4 TKKPNIILIMVDQMRGDCLGCNGNKAVETPNLDMLASEGYNFENAYSA--VPSCTPARAALLTGLSQWHHGRVGYGDVVP 81 (485)
T ss_pred CCCCCEEEEEECCCCHHHHHhcCCCcCCCccHHHHHhcCceeeceecC--CCcchhhHHHHHhcCChhhcCccccccccc
Confidence 35899999999999998432 35799999999999999988766 478999999999999999999977532110
Q ss_pred CCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEee-c---CCCC-cCCCCCCCC------------------Cccc---
Q 046091 105 YTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYF-W---PGSE-VKKGSWNCP------------------KGFC--- 158 (423)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~-~---~~~~-~~~~~~~~~------------------~~~~--- 158 (423)
+....++.+.|+++||.|+.+. | +... .....|... ..+.
T Consensus 82 --------------~~~~~tl~~~l~~~GY~T~~~GK~h~~~~~~~~gfd~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 147 (485)
T PRK13759 82 --------------WNYKNTLPQEFRDAGYYTQCIGKMHVFPQRNLLGFHNVLLHDGYLHSGRNEDKSQFDFVSDYLAWL 147 (485)
T ss_pred --------------ccccchHHHHHHHcCCeeEEecccccCCCcccCCccceeccccccccccccCcccccccchHHHHh
Confidence 0012478899999999987652 1 1100 000000000 0000
Q ss_pred --------ccCC----------C-----C-C--ChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCc-------CCC
Q 046091 159 --------MNYN----------G-----S-V--PFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHK-------VGP 205 (423)
Q Consensus 159 --------~~~~----------~-----~-~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~-------~g~ 205 (423)
..+. . . . ......+.+++|++....++|+|+++.+.++|..-.. |..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~kPfFl~v~~~~pH~P~~~p~~~~~~y~~ 227 (485)
T PRK13759 148 REKAPGKDPDLTDIGWDCNSWVARPWDLEERLHPTNWVGSESIEFLRRRDPTKPFFLKMSFARPHSPYDPPKRYFDMYKD 227 (485)
T ss_pred hhhcCCCCCcccccccccccccccccccccceeccHHHHHHHHHHHHhCCCCCCeEEEeCCCCCcCCCCCCHHHHHhccc
Confidence 0000 0 0 0 0111356778888754456899999999999975211 100
Q ss_pred ------------------------------C--------CHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCC
Q 046091 206 ------------------------------D--------DPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGM 247 (423)
Q Consensus 206 ------------------------------~--------s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~ 247 (423)
. ...|.++++++|..||+|++.|++.|+++||+||||||||.
T Consensus 228 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~iG~l~~~l~~~g~~dnTiiv~tsDHG~ 307 (485)
T PRK13759 228 ADIPDPHIGDWEYAEDQDPEGGSIDALRGNLGEEYARRARAAYYGLITHIDHQIGRFLQALKEFGLLDNTIILFVSDHGD 307 (485)
T ss_pred cCCCCCCCCchhhhcccccccccchhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCeEEEEECCCcc
Confidence 0 02378899999999999999999999999999999999996
No 8
>KOG3731 consensus Sulfatases [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.2e-23 Score=192.77 Aligned_cols=273 Identities=22% Similarity=0.366 Sum_probs=178.9
Q ss_pred CCcEEEEEECCCCCCCCC-CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCCCCee
Q 046091 32 KPVVLLVSSDGFRFGYQF-KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYTGDTF 110 (423)
Q Consensus 32 ~~~vv~I~iDgl~~d~~~-~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~~~~ 110 (423)
+||||+|..|+.+-.+.+ ....|+++-+.+.|..|.+++.. .+.|+|++.||+||+||.+|+++.|.-
T Consensus 34 ~PNvIlvLTDDqD~eLGsm~vm~kt~~~~~dgg~~Fi~aYvt--tslCcPSRnSiLTGky~hnhhv~tnn~--------- 102 (541)
T KOG3731|consen 34 PPNVILVLTDDQDVELGSMAVMFKTLTIMLDGGAHFISAYVT--TSLCCPSRNSILTGKYVHNHHVYTNNE--------- 102 (541)
T ss_pred CCCEEEEEccCcchhcccccccchHHHHHhcCCceEEecccC--ccccccccchhhhcccccccccccccc---------
Confidence 499999999999866654 35678999999999999988866 589999999999999999999988721
Q ss_pred ecCCCCCcc---cCCcchhhhHhh-cCCcEEEee---cCC-CCcCCCCCCCCCccc-----ccC----CC-------CCC
Q 046091 111 TMASHEPKW---WLGEPLWETVTN-HGLKAATYF---WPG-SEVKKGSWNCPKGFC-----MNY----NG-------SVP 166 (423)
Q Consensus 111 ~~~~~~~~~---~~~~~i~~~~~~-~G~~~~~~~---~~~-~~~~~~~~~~~~~~~-----~~~----~~-------~~~ 166 (423)
...++.| |...|+...+.. +||+|+.+- -+. .....-+|....... .+| ++ ..+
T Consensus 103 --ncss~~Wq~~he~~t~~~~l~~~~GYrT~~~GKylney~gsyiPpgW~ew~~l~knskfyNytv~~Ng~~~khg~~y~ 180 (541)
T KOG3731|consen 103 --NCSSPSWQADHEKRTFAVYLAIDQGYRTAFFGKYLNEYNGSYIPPGWSEWAGLIKNSKFYNYTVCKNGIKEKHGSDYS 180 (541)
T ss_pred --ccCchhHhhhhccCchhhhhhhhhceeeecchhhccccCcccCCCCchhhhccccccchhcchhhcCccccccccccc
Confidence 1223455 344566555555 999997642 111 011111222111000 000 00 000
Q ss_pred ---hHHH-HHHHHhhccC---CCCCCCcEEEEcCCCCCCC---------------CCcC------------------CCC
Q 046091 167 ---FEDR-VDTVLSYFDL---PSSEIPSFMTLYFEDPDHQ---------------GHKV------------------GPD 206 (423)
Q Consensus 167 ---~~~~-~~~~~~~~~~---~~~~~p~~~~~~~~~~d~~---------------~h~~------------------g~~ 206 (423)
+.+. ....+.+++. ....+|+|+.+.|+.||.. .|.+ ||.
T Consensus 181 kdyltDlitn~s~~ff~~s~~~~~~~Pf~l~is~~aPHgped~apQf~~~F~n~~~h~t~s~n~aPnpdk~W~~~~t~pm 260 (541)
T KOG3731|consen 181 KDYLTDLITNDSLLFFDGSKKRHSQEPFFLAISFPAPHGPEDSAPQFSHLFNNVQFHRTPSYNLAPNPDKHWILRTTGPM 260 (541)
T ss_pred hhhhchhhhhhhHHHHhhccccccCCCeEEEeccCCCCCCCCccHHHHHhccccccccCcccccCCCCccceeeeeccCC
Confidence 1111 1223344443 2347899999999999853 2221 111
Q ss_pred C-----------HHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCCCCCCcEEEcccccccccCCcceeecc
Q 046091 207 D-----------PEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVGTCDKKLIFLDDLASWIEIPAEWVQSY 275 (423)
Q Consensus 207 s-----------~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 275 (423)
+ ....+.++.+|..|+++.+.|.+.|.++||.||.|||||..- .++
T Consensus 261 ~~ih~~ft~~l~rkrlQtlqSvd~sve~l~n~l~elgeLdnTyivytsDhGyhl---------Gqf-------------- 317 (541)
T KOG3731|consen 261 SNIHIPFTNILPRKRLQTLQSVDDSVERLYNLLGELGELDNTYIVYTSDHGYHL---------GQF-------------- 317 (541)
T ss_pred CccccccccchHHHHHHHHHhHHHHHHHHHHHHHHhhcccceEEEEEcCCcccc---------ccc--------------
Confidence 1 234788999999999999999999999999999999999832 111
Q ss_pred CceeEEeCCCCCChHHHHHHHHhhhhcCcccCCCceEEEecCCCCccccccCCCCCCCcEEEccCCeEEecccCCCCcCC
Q 046091 276 SPLLAIRPPAGYNPSDIVEKMNEGLKSGKVENGKNLKVYLKGELPSRLHYAASDRIPPIIGLIEEGFKVEQKRTNRKECG 355 (423)
Q Consensus 276 ~~~~~i~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~ 355 (423)
....+...| |.
T Consensus 318 ------------------------------------gl~kgks~p---------------------yE------------ 328 (541)
T KOG3731|consen 318 ------------------------------------GLWKGKSMP---------------------YE------------ 328 (541)
T ss_pred ------------------------------------ccccCCCCc---------------------ee------------
Confidence 000000000 10
Q ss_pred CCCCCCCCCCchHhHHhhhCCCCCCCCccCC-ccchhHHHHHHHhhCCCCC-CCCCCCccccccccc
Q 046091 356 GAHGYDNAVFSMRTIFIGHGPQFARGRKVPS-FENVQIYNVITSILKIDGA-PNNGSSSFPLSILLR 420 (423)
Q Consensus 356 g~HG~~~~~~~m~~~f~~~Gp~i~~~~~~~~-~~~~Diapti~~llgi~~~-~~~G~~~~~~~~l~~ 420 (423)
-+++++|+..||+|+++..... +.|+||||||+++.|++-+ .+|| .+++++|..
T Consensus 329 ---------fdiRVPf~iRgP~v~~~~~~~~Iv~niDlaPTilDiAGlp~p~~mdg--~sll~ll~~ 384 (541)
T KOG3731|consen 329 ---------FDIRVPFLIRGPGVAPNKTVNEIVLNIDLAPTILDIAGLPKPACMDG--RSLLPLLGK 384 (541)
T ss_pred ---------EeeeeeEEeeCCCCCccccchhhheeccccchhhhhcCCCCcccccc--cchhhhhcc
Confidence 1467999999999999987754 6799999999999999854 3555 456666543
No 9
>COG3119 AslA Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]
Probab=99.91 E-value=1e-22 Score=201.57 Aligned_cols=98 Identities=23% Similarity=0.307 Sum_probs=76.8
Q ss_pred CCCcEEEEEECCCCCCCCC----CC--CCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCC
Q 046091 31 EKPVVLLVSSDGFRFGYQF----KT--STPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDP 104 (423)
Q Consensus 31 ~~~~vv~I~iDgl~~d~~~----~~--~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~ 104 (423)
++||||+|+.|+++++.+. .. .||++++|+++|+.|+|++++ .+.|.|++++|+||++|.+||+..|... +
T Consensus 3 ~rPNil~i~~Ddlg~~~l~~~g~~~~~~tp~~d~LA~~Gv~f~n~y~~--~~~c~PsRa~l~TGr~~~~~G~~~~~~~-~ 79 (475)
T COG3119 3 KRPNILIIMADDLGYGDLGAYGGPVVGPTPNIDRLAAEGVRFTNAYTT--SPCCGPSRAALLTGRYPFRTGVGGNAEP-P 79 (475)
T ss_pred CCCcEEEEEeccCCCCCCCcCCCccccCCCCHHHHHhcCceeeccccC--cCCCchhhhHHhhCCCccccccccccCC-C
Confidence 3999999999999998543 33 789999999999999998877 6778899999999999999999998653 1
Q ss_pred CCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEe
Q 046091 105 YTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATY 139 (423)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 139 (423)
... ..+. -...|+.+.|+++||.|+.+
T Consensus 80 g~~--~~l~------~~~~Tla~~Lk~~GY~Ta~~ 106 (475)
T COG3119 80 GYP--GGLP------DEVPTLAELLKEAGYYTALF 106 (475)
T ss_pred Ccc--cccC------cccchHHHHHHHcCChhhhc
Confidence 110 0000 01247888899999998664
No 10
>PF00884 Sulfatase: Sulfatase; InterPro: IPR000917 Sulphatases 3.1.6. from EC are enzymes that hydrolyze various sulphate esters. The sequence of different types of sulphatases are available and have shown to be structurally related [, , ]; these include: arylsulphatase A 3.1.6.8 from EC (ASA), a lysosomal enzyme which hydrolyses cerebroside sulphate; arylsulphatase B 3.1.6.12 from EC (ASB), which hydrolyses the sulphate ester group from N-acetylgalactosamine 4-sulphate residues of dermatan sulphate; arylsulphatase C (ASD) and E (ASE); steryl-sulphatase 3.1.6.2 from EC (STS), a membrane bound microsomal enzyme which hydrolyses 3-beta-hydroxy steroid sulphates; iduronate 2-sulphatase precursor 3.1.6.13 from EC (IDS), a lysosomal enzyme that hydrolyses the 2-sulphate groups from non-reducing-terminal iduronic acid residues in dermatan sulphate and heparan sulphate; N-acetylgalactosamine-6-sulphatase 3.1.6.4 from EC, which hydrolyses the 6-sulphate groups of the N-acetyl-d-galactosamine 6-sulphate units of chondroitin sulphate and the D-galactose 6-sulphate units of keratan sulphate; glucosamine-6-sulphatase 3.1.6.14 from EC (G6S), which hydrolyses the N-acetyl-D-glucosamine 6-sulphate units of heparan sulphate and keratan sulphate; N-sulphoglucosamine sulphohydrolase 3.10.1.1 from EC (sulphamidase), the lysosomal enzyme that catalyses the hydrolysis of N-sulpho-d-glucosamine into glucosamine and sulphate; sea urchin embryo arylsulphatase 3.1.6.1 from EC; green algae arylsulphatase 3.1.6.1 from EC, which plays an important role in the mineralisation of sulphates; and arylsulphatase 3.1.6.1 from EC from Escherichia coli (aslA), Klebsiella aerogenes (gene atsA) and Pseudomonas aeruginosa (gene atsA). ; GO: 0008484 sulfuric ester hydrolase activity, 0008152 metabolic process; PDB: 1P49_A 1FSU_A 2QZU_A 2W5Q_A 2W5T_A 2W5S_A 2W5R_A 3LXQ_A 1HDH_B 1E33_P ....
Probab=99.90 E-value=3.4e-23 Score=195.11 Aligned_cols=202 Identities=20% Similarity=0.277 Sum_probs=131.7
Q ss_pred CcEEEEEECCCCCCCCC-----CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCCC
Q 046091 33 PVVLLVSSDGFRFGYQF-----KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYTG 107 (423)
Q Consensus 33 ~~vv~I~iDgl~~d~~~-----~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~ 107 (423)
||||+|++|++|.+.+. ...||+|++|+++|+.+.+++++ .+.|.+++++++||.+|..+|+..+..+..
T Consensus 1 pNVv~i~~Es~~~~~~~~~~~~~~~tP~l~~l~~~g~~f~~~~s~--~~~T~~s~~~~ltG~~~~~~~~~~~~~~~~--- 75 (308)
T PF00884_consen 1 PNVVLIVLESLRADDLSCYGYPIPTTPNLDRLAENGLRFSNAYSS--GPWTSPSRFSMLTGLYPHNSGVYSNGPYQQ--- 75 (308)
T ss_dssp -EEEEEEETT--TTSSGGGTSSSSSSHHHHHHHHTSEEESSEE-S--SSSHHHHHHHHHHSS-HHHHT-SSSCSTTT---
T ss_pred CEEEEEEcccCCCCCCCCCCCCcccCHHHHHhhhccEEEEEEEec--cCccccchhhhccccccccccccccccccc---
Confidence 79999999999987432 23499999999999999987755 578999999999999999999887653321
Q ss_pred CeeecCCCCCcccCCcchhhhHhhcCCcEEEeec-CCCCcC------CCCCC---C----CCcccc-----cCC------
Q 046091 108 DTFTMASHEPKWWLGEPLWETVTNHGLKAATYFW-PGSEVK------KGSWN---C----PKGFCM-----NYN------ 162 (423)
Q Consensus 108 ~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~-~~~~~~------~~~~~---~----~~~~~~-----~~~------ 162 (423)
...+....++.+.++++||++..+.- ...-.. ..++. . ...+.. .+.
T Consensus 76 --------~~~~~~~~~l~~~l~~~GY~t~~~~~~~~~~~~~~~~~~~~gfd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (308)
T PF00884_consen 76 --------FNLPSKFPSLPDLLKKAGYRTSFFGPWDASFYNNQAFYPSHGFDYFLGQPGLSDRIDNPRISGPFNDVNRSN 147 (308)
T ss_dssp --------CSSTTTS--HHHHHHHTT-EEEEEEES-STGGGHHCHCHHTT-SEEEEESSSGGGTTSSTTEEECTTTTEST
T ss_pred --------ccccccccccHHHHhhcccccceeeccccCccccccccccCCcceEEeeecccccccccccccccccccccc
Confidence 01112235788999999999966531 111000 00000 0 000000 000
Q ss_pred -CCCChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCC------------------CCCHHHHHHHHHHHHHHHH
Q 046091 163 -GSVPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVG------------------PDDPEITEAVARIDRMIGR 223 (423)
Q Consensus 163 -~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g------------------~~s~~~~~~~~~~D~~ig~ 223 (423)
........++.+.+++.. ++++|.|+++++..+|.+..... .....|.+++.++|++|++
T Consensus 148 ~~~~~d~~~~~~~~~~l~~-~~~~p~f~~~~~~~~H~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~D~~l~~ 226 (308)
T PF00884_consen 148 EWGYSDDALFDYAIDFLLN-EDDKPFFLFIHTMGPHGPYPYPPDYAEKFPKFSPDIPDKDREMRNNYLNAIAYVDDQLGR 226 (308)
T ss_dssp TTCEHHHHHHHHHHHHHHC-TTTSSEEEEEEE-TTSSSTCTTCCHHHGGTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhh-cccccceeEEeeccccccccccccccccccccccccccchhhhHHHHHHHHHHHHHHhhh
Confidence 011123345667777622 34899999999999998532211 1123688999999999999
Q ss_pred HHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 224 LIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 224 ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
|++.|++++.+++|+||||||||..
T Consensus 227 ~~~~l~~~~~~d~TiiiitsDHG~~ 251 (308)
T PF00884_consen 227 FIEYLKEQGLYDNTIIIITSDHGES 251 (308)
T ss_dssp HHHHHHHTTCGGGEEEEEEESSSSS
T ss_pred hhhhhhhcCCcccceeEEecCcCcc
Confidence 9999999999999999999999985
No 11
>KOG3867 consensus Sulfatase [General function prediction only]
Probab=99.87 E-value=6.8e-21 Score=183.50 Aligned_cols=213 Identities=21% Similarity=0.279 Sum_probs=132.8
Q ss_pred cCCCCcEEEEEECCCCC-C---CCCC-CCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccC
Q 046091 29 KLEKPVVLLVSSDGFRF-G---YQFK-TSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVD 103 (423)
Q Consensus 29 ~~~~~~vv~I~iDgl~~-d---~~~~-~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~ 103 (423)
..++||||+|++|++++ | |.+. ..|||+++|+++|+.|+|++.+ ++.|+|++++++||+||.+.|+++...+
T Consensus 26 ~~~~PNillIlaDDlG~gDlg~yG~~~i~TPniD~LA~~Gv~f~n~~~a--~s~CtPSRaalLTGr~pirtGm~~~~~~- 102 (528)
T KOG3867|consen 26 STDPPNILLILADDLGWGDLGCYGNKTIRTPNIDRLAAEGLLFTNAYAA--VSLCSPSRAALLTGRYPIRTGMYHSVIY- 102 (528)
T ss_pred CCCCCCEEEEEEccCCCcccccCCCcccCCCCHHHHHhcccceeccccc--ccccCchHHHHhcCCCccccccccceeE-
Confidence 45799999999999999 5 4444 7899999999999999998877 7899999999999999999999987655
Q ss_pred CCCCCeeecCCCCCcccCC-cchhhhHhhcCCcEEEee-cCCC----------CcCCCCCCCC------CcccccCCCC-
Q 046091 104 PYTGDTFTMASHEPKWWLG-EPLWETVTNHGLKAATYF-WPGS----------EVKKGSWNCP------KGFCMNYNGS- 164 (423)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~G~~~~~~~-~~~~----------~~~~~~~~~~------~~~~~~~~~~- 164 (423)
+... .+..+. --.. .++.+.++++||.|..+. |--. ......+..+ ..+...+...
T Consensus 103 r~~~-~~~~gg----lP~~E~tlae~l~~~GY~T~liGKWHLG~~~~~~~P~~rGFd~~~g~~~~~~~~~~~~~~~~~~~ 177 (528)
T KOG3867|consen 103 RVHH-NFSPGG----LPLNETTLAEILQEAGYSTGLIGKWHLGRSDPCYHPTNRGFDYFYGEPELHSPLLGPRDVLDVPE 177 (528)
T ss_pred eecc-CCCCCC----cccchhHHHHHHHhCCccccccccccCCCCCCCcCCcccCccccccccccccccccccccccccc
Confidence 2100 000000 0011 235566777777775542 1110 0000011110 0000000000
Q ss_pred -------------CChH--H----------------HHHHHHhhcc-CCCCCCCcEEEEcCCCCCCC-----CCcCCC--
Q 046091 165 -------------VPFE--D----------------RVDTVLSYFD-LPSSEIPSFMTLYFEDPDHQ-----GHKVGP-- 205 (423)
Q Consensus 165 -------------~~~~--~----------------~~~~~~~~~~-~~~~~~p~~~~~~~~~~d~~-----~h~~g~-- 205 (423)
..+. + ..+.....+. ....++|+|+.......+.. .|..-+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~l~~~~~~~~~~~~~~~l~v~~p~~ 257 (528)
T KOG3867|consen 178 QALQFLGKLKVSAKPFFLREGLHVPHRPGWYSSTGLPTFGACYLMRNHGLSEQPMFLYWAPPAAHKEAMDSPLHVHVPLF 257 (528)
T ss_pred hhhhhhcccCccccchhhhhhcccccccCCccccccccchhhhhhhccCcCCCCceeeccchhhcccccccccccCcccc
Confidence 0000 0 0011111111 11456788887766555552 222211
Q ss_pred ---------CCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 206 ---------DDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 206 ---------~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
....|.+++.++|..||++++.|++.|+++||+|++|||||...
T Consensus 258 ~~~~f~~~s~~~~y~~~V~~mD~~VG~ildaL~~~gl~nnTiv~FtSDnG~~~ 310 (528)
T KOG3867|consen 258 TPKTFAGRSKRGLYGDMVSEMDWSVGRILDALDDLGLANNTLVIFTSDNGGPL 310 (528)
T ss_pred CCccccchhhhhHHHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEeCCCCccc
Confidence 12458899999999999999999999999999999999999853
No 12
>PRK12363 phosphoglycerol transferase I; Provisional
Probab=99.80 E-value=2.3e-18 Score=172.70 Aligned_cols=207 Identities=17% Similarity=0.187 Sum_probs=128.4
Q ss_pred cCCCCcEEEEEECCCCCCCCC----CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCC-CCcccccccC
Q 046091 29 KLEKPVVLLVSSDGFRFGYQF----KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAY-HGIINNHFVD 103 (423)
Q Consensus 29 ~~~~~~vv~I~iDgl~~d~~~----~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~-hGi~~n~~~~ 103 (423)
..++||||+|.+|+++..+++ ...||+|++|+++|++|+|.++..-...|..+..+..+|..... .| ..|.+..
T Consensus 153 ~aKk~NVVvI~LESle~~~id~~~~~~lTPnLd~Lakegl~FtNfy~~~G~g~Ti~Gl~as~~GlPl~~~~g-~~Nt~~~ 231 (703)
T PRK12363 153 LQKRKNIVWIYGESLERTYFDEDVFPGLMPNLTRLATEAVDVRNLASTEGSGWTIAGMVASMCGVPLTTAQG-DENSMDR 231 (703)
T ss_pred ccCCCCEEEEEEccCchhhhcCCCCCCcChhHHHHHhCCeeECCeEeCCCCCcchhhHhHHHhCCCCcCCCC-ccccccc
Confidence 357899999999999986543 46799999999999999987653223457777777777753211 11 0011100
Q ss_pred CCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcC-C----CCCCCCCccccc-CC----------CCC--
Q 046091 104 PYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVK-K----GSWNCPKGFCMN-YN----------GSV-- 165 (423)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~-~----~~~~~~~~~~~~-~~----------~~~-- 165 (423)
.....+ ...++.+.|+++||+++.++--..... . ..+.....+... +. ...
T Consensus 232 --------~~~f~p---~~~~La~ILkq~GY~Taf~hG~~~sF~nrd~fyk~hGFD~f~d~~~f~~~~~~~~~~~~~WGl 300 (703)
T PRK12363 232 --------MGHFLP---EARCLGDYLKDQGYTNHYVGGADASFAGKGKFLSSHGFDEVHDVNYFLHDKGVAPKHFSAWGV 300 (703)
T ss_pred --------ccccCc---ccchHHHHHHhCCCcEEEEeCCCcCcCchhhHHHhCCCCEEeechhhccccccCcccCCCCCc
Confidence 000000 124677899999999987651111000 0 000010000000 00 001
Q ss_pred ChHHHHHHHHhhccC-CCCCCCcEEEEcCCCCCCCC-Cc--------CCC--CCHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 046091 166 PFEDRVDTVLSYFDL-PSSEIPSFMTLYFEDPDHQG-HK--------VGP--DDPEITEAVARIDRMIGRLIDGIEKRGV 233 (423)
Q Consensus 166 ~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~d~~~-h~--------~g~--~s~~~~~~~~~~D~~ig~ll~~l~~~~~ 233 (423)
.....++.+.++++. .+.++|+|+++...++|.+. |. +.. ....|.++++++|++||++++.|++.|+
T Consensus 301 ~Dd~lfd~A~~~Le~Ls~~~qPFfl~llTvsnH~Py~~lp~~~~~~~~~~~~gd~~Yl~tI~ysD~aIG~FId~LKksgl 380 (703)
T PRK12363 301 HDDVLLDDAYDEFETLSRAGQPFMLTTLTMDTHHPAGHLPSACKGQRYDSPLGDIGMLHAIKCSDRLIGQLVDRIRNSRY 380 (703)
T ss_pred ccHHHHHHHHHHHHhhhccCCCEEEEeeCCCCCCCcccCchhccccccccccccHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 112345566665542 24578999998888887762 21 110 1356889999999999999999999999
Q ss_pred CCCeEEEEECCCCC
Q 046091 234 FEDVTIVMVGDHGM 247 (423)
Q Consensus 234 ~~~t~viitsDHG~ 247 (423)
++||+|||+||||.
T Consensus 381 ydNTIIV~~GDH~~ 394 (703)
T PRK12363 381 GKNTIIVIASDHLA 394 (703)
T ss_pred cCCeEEEEEcCCCc
Confidence 99999999999985
No 13
>PRK03776 phosphoglycerol transferase I; Provisional
Probab=99.80 E-value=4.7e-18 Score=170.53 Aligned_cols=208 Identities=17% Similarity=0.137 Sum_probs=131.5
Q ss_pred cCCCCcEEEEEECCCCCCCCC----CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCC
Q 046091 29 KLEKPVVLLVSSDGFRFGYQF----KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDP 104 (423)
Q Consensus 29 ~~~~~~vv~I~iDgl~~d~~~----~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~ 104 (423)
+.++||||+|.++++...+.+ ...+|+|++|+++|++|+|...-.-...|..+..++++|. |...-+..+....
T Consensus 158 p~kK~NVViI~LESle~ty~d~~~~~~ltP~LdkLakegl~FsN~~q~~gt~~Ti~GmfAs~cGl-Pl~~pf~~n~s~~- 235 (762)
T PRK03776 158 PNPKLNLVYIYGESLERTYFDNEAFPGLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVASQCGI-PLFAPFEGNASAS- 235 (762)
T ss_pred CCCCCcEEEEEEecCChhhhccCCCCCCChhHHHHHhcCeeecCceecCCCCccHHHHHHHHcCC-CCCCCCCCccccc-
Confidence 467889999999999987653 3578999999999999997542222456899999999998 4321111111000
Q ss_pred CCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcC-CCC----CCCCCccc-----c-----cCCCCCC--h
Q 046091 105 YTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVK-KGS----WNCPKGFC-----M-----NYNGSVP--F 167 (423)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~-~~~----~~~~~~~~-----~-----~~~~~~~--~ 167 (423)
.. .+ .+ ...++.+.|+++||.+..++--..... ... ......+. . .+..... .
T Consensus 236 -~~-~f-----~P---~~~cLgdILK~~GY~T~Fi~G~d~~F~n~~~f~~~hGFD~~yg~~d~~~~~~~~~~~n~WG~~D 305 (762)
T PRK03776 236 -VS-SF-----FP---QNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKSHGFDHLYGSEELKSVVADPHYRNDWGFYD 305 (762)
T ss_pred -cc-cc-----CC---ccccHHHHHHhCCCceEEEeCCCcCcCchhhhHHhCCCcEEecchhcccccccccccCCcccCc
Confidence 00 00 00 124677899999999877641111000 000 00000010 0 0111111 1
Q ss_pred HHHHHHHHhhcc-CCCCCCCcEEEEcCCCCCCCC-Cc--------CC--CCCHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 046091 168 EDRVDTVLSYFD-LPSSEIPSFMTLYFEDPDHQG-HK--------VG--PDDPEITEAVARIDRMIGRLIDGIEKRGVFE 235 (423)
Q Consensus 168 ~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~d~~~-h~--------~g--~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~ 235 (423)
+..++.+.+.+. +.+.++|+|+++...++|.+. +. +. ....++..+++++|++||++++.+++.++++
T Consensus 306 d~Lfd~A~e~l~eLsk~~kPFfl~llTlstH~P~g~~~~~c~~~~y~~~g~~~~~~~~v~~~D~~iG~fi~~Lk~~g~~d 385 (762)
T PRK03776 306 DTVLDEAWKKFEELSRSGQRFSLFTLTVDTHHPDGFISRTCNRKSYDFDGKPNQSFSAVSCSQENIAALINKIKASPWFK 385 (762)
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEEecCCCCcCCCccCchhhcccccccCCcchHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 233455554333 234678999999999998873 21 11 1235678899999999999999999999999
Q ss_pred CeEEEEECCCCCC
Q 046091 236 DVTIVMVGDHGMV 248 (423)
Q Consensus 236 ~t~viitsDHG~~ 248 (423)
||+||++||||..
T Consensus 386 NTiIV~~sDHG~m 398 (762)
T PRK03776 386 NTVIVVSSDHLAM 398 (762)
T ss_pred CeEEEEEccCCcc
Confidence 9999999999974
No 14
>COG3083 Predicted hydrolase of alkaline phosphatase superfamily [General function prediction only]
Probab=99.75 E-value=4.4e-17 Score=152.46 Aligned_cols=192 Identities=16% Similarity=0.290 Sum_probs=133.7
Q ss_pred cCCCCcEEEEEECCCCCCCCCCCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcC-CCCcccccccCCCCC
Q 046091 29 KLEKPVVLLVSSDGFRFGYQFKTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPA-YHGIINNHFVDPYTG 107 (423)
Q Consensus 29 ~~~~~~vv~I~iDgl~~d~~~~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~-~hGi~~n~~~~~~~~ 107 (423)
+..+|||++|++||+|.|.+++..||+|..++++.+.|+|.+.+ ...|-.+..+|+-|..|. --+|..+.
T Consensus 256 ~a~~~NillI~vdglR~d~l~~~~MP~la~Fa~q~i~FtnHySs--GN~t~~GlfGLFYGL~~~Y~d~vls~~------- 326 (600)
T COG3083 256 PAHGPNILLITVDGLRYDALDEKQMPNLADFANQNIRFTNHYSS--GNSTQAGLFGLFYGLSATYWDSVLSAR------- 326 (600)
T ss_pred CCCCCCEEEEEeccccccccChhhChhHHHHHhhhcccccccCC--CCccccchheeeccCChhHHHHHHhcC-------
Confidence 45689999999999999999899999999999999999998877 677888888888887764 11221111
Q ss_pred CeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCCCCCCCCCc---ccccC-----CCCCChHHHHHHHHhh-c
Q 046091 108 DTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKKGSWNCPKG---FCMNY-----NGSVPFEDRVDTVLSY-F 178 (423)
Q Consensus 108 ~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~~~~~~-~ 178 (423)
..+-+.+.++++||.-+.+.-- .+..|.. ..... ....+-++++.+...| .
T Consensus 327 -------------t~p~Lie~L~qq~YQfglfss~-------~F~splfrqalf~~l~~~~~~t~~~~~~~~t~~~~wf~ 386 (600)
T COG3083 327 -------------TPPALIEALRQQNYQFGLFSSD-------GFKSPLFRQALFSDLSLPALVTQSSDDERATQWLLWFG 386 (600)
T ss_pred -------------CchHHHHHHHhcCceEEeeccC-------CCCCchHHHHHhhhcCccccccCCchHHHHHHHHHHHH
Confidence 1234568899999987765311 1211111 00000 0001122233332333 3
Q ss_pred cCCCCCCCcEEEEcCCCCCCCCCcC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 179 DLPSSEIPSFMTLYFEDPDHQGHKV-------GPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 179 ~~~~~~~p~~~~~~~~~~d~~~h~~-------g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
+...+++|.|.++.+...+.....- -+....|..+++++|..||++++.|++++++|||+||||||||..-
T Consensus 387 ~~~~~d~PwFs~L~l~~~~~~~~~~s~q~~~~~~~~~~Y~~a~~~vD~~I~~vLe~L~~~~~L~NTvVIITs~HG~eF 464 (600)
T COG3083 387 RYRDEDNPWFSYLSLNSSHANDDPSSNQAKARPPFKNRYQNALREVDSQIGRVLEQLRNSGLLDNTVVIITADHGEEF 464 (600)
T ss_pred HhhccCCCceEEEEccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhcccccceEEEEECCCCccc
Confidence 3345678999999988866543210 1133678999999999999999999999999999999999999854
No 15
>KOG2125 consensus Glycosylphosphatidylinositol anchor synthesis protein [Signal transduction mechanisms]
Probab=99.74 E-value=4.2e-18 Score=164.72 Aligned_cols=225 Identities=22% Similarity=0.336 Sum_probs=143.8
Q ss_pred chhhhHhhhccCCCCCCCchhhhh-hhhcCCCCcEEEEEECCCCCCCCC--CCCCchHHHHHHcC--cccCCCcccCCCC
Q 046091 2 AFAFLFFSSASSSSAQSSFETTAR-ALKKLEKPVVLLVSSDGFRFGYQF--KTSTPNIHRLINNG--TEAETGLIPVFPS 76 (423)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~vv~I~iDgl~~d~~~--~~~~P~l~~l~~~G--~~~~~~~~~~~ps 76 (423)
+|.+++++..-...|.+...+-+. ..++..++++|+++||++|.|++. +..||+-..++-+| .-+.....+ ||
T Consensus 19 Lfv~gFfp~k~~~tg~s~~~~~~d~~~~~~~~~~lvf~viDalr~dF~~~s~~smp~t~s~~~~~~a~g~~a~A~~--PT 96 (760)
T KOG2125|consen 19 LFVFGFFPVKITLTGKSGSEPYRDSEQPPPEKDRLVFVVIDALRADFLFSSKESMPFTQSLLANGDAKGYHAFARP--PT 96 (760)
T ss_pred HHHhhcccccccCCCcccCCCccccCCCCcccceEEEEEhhhhhhhccccCCCCCccHHHHHhcCCceeeecccCC--Cc
Confidence 466666666655555444433333 334556788999999999999864 46899999887644 222211223 99
Q ss_pred CCchhHHHHhhcCCcCCCCcccccccCCCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCC--CCC---
Q 046091 77 LTFPNHYSIVTGLYPAYHGIINNHFVDPYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKK--GSW--- 151 (423)
Q Consensus 77 ~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~--~~~--- 151 (423)
+|.|-..+|.||..|.---|.-|.--+... .......+.+.|.+.. ++|..+.... +.|
T Consensus 97 VTmPRLka~tTGtlp~FidvllNva~~~~~---------------~d~wl~q~~~~n~kv~-f~GDdTWLkLfPs~f~~f 160 (760)
T KOG2125|consen 97 VTMPRLKAITTGTLPSFIDVLLNVATQELL---------------DDNWLGQFFQINKKVH-FNGDDTWLKLFPSEFLRF 160 (760)
T ss_pred ccchhhhhhhcCCCccHHHHHHhhhhHhhc---------------ccHHHHHHHHhCcEEE-EccchHHHHHhhHHHHhc
Confidence 999999999999999754444442111110 0112245666666553 3332221100 000
Q ss_pred -CCCCcccccCCCCCChHHHHHHHHhhcc--CCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 046091 152 -NCPKGFCMNYNGSVPFEDRVDTVLSYFD--LPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGI 228 (423)
Q Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l 228 (423)
.....+..+| .+.-+.+-+.+. +.....||.+.+|+...|++||..|+.|+..-+.++++|+.++++.+.+
T Consensus 161 ~g~~SFfVsDy------t~vDnNVTr~L~~l~~~~~~Wd~lILHYLGlDHIGH~~G~~Sp~vp~KLkEmDeiv~~I~~~~ 234 (760)
T KOG2125|consen 161 EGVTSFFVSDY------TDVDNNVTRHLPTLELNSSDWDLLILHYLGLDHIGHVLGPSSPLVPAKLKEMDEIVKRIHDYL 234 (760)
T ss_pred cCcceEEehhh------hhhhhhhhhcCCchhhhhcchhHHHHHHhccceeccccCCcchhhhHHHHHHHHHHHHHHHHH
Confidence 0011111111 111112222222 1234569999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCeEEEEECCCCCCCC
Q 046091 229 EKRGVFEDVTIVMVGDHGMVGT 250 (423)
Q Consensus 229 ~~~~~~~~t~viitsDHG~~~~ 250 (423)
.+..-.++|++|+++||||+..
T Consensus 235 ~~~~s~d~tllil~gDHGM~e~ 256 (760)
T KOG2125|consen 235 MEHRSGDQTLLILCGDHGMTES 256 (760)
T ss_pred hhcCCCCceEEEEEcccccccc
Confidence 8877668999999999999865
No 16
>KOG2126 consensus Glycosylphosphatidylinositol anchor synthesis protein [Signal transduction mechanisms]
Probab=99.73 E-value=2.1e-17 Score=164.06 Aligned_cols=188 Identities=23% Similarity=0.435 Sum_probs=121.9
Q ss_pred CcEEEEEECCCCCCCCCC--CCCch---------HHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccc
Q 046091 33 PVVLLVSSDGFRFGYQFK--TSTPN---------IHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHF 101 (423)
Q Consensus 33 ~~vv~I~iDgl~~d~~~~--~~~P~---------l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~ 101 (423)
..||++.||++|+|++-. ...|. +..+-+++.+.. ...+-.||+|.--.-.+-||..|.-=-+-+|.-
T Consensus 59 ssvvilliDaLrydf~ip~~~~~~y~n~~~~l~~~~~l~~~~~~l~-~f~ADpPTTTlQRLKGLTTGsLPTFID~GsNF~ 137 (895)
T KOG2126|consen 59 SSVVILLIDALRYDFLIPINSPLPYHNRGTILQELKHLNKSKAFLA-KFIADPPTTTLQRLKGLTTGSLPTFIDIGSNFA 137 (895)
T ss_pred cceEEEEeehhhhccccccCCCchhhhcchhHHHHHhhCcchhHHH-HHhcCCCccHHHHhhccccCCCccceeccccCC
Confidence 359999999999995311 22233 333334444333 234455888888889999999997443333321
Q ss_pred cCCCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCCCCCC--CCCcccc-----cCC--CCCCh-HHHH
Q 046091 102 VDPYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKKGSWN--CPKGFCM-----NYN--GSVPF-EDRV 171 (423)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~~--~~~~~-~~~~ 171 (423)
.+.- ....+-..+...|+++... .+..|. .|+.+.. .++ +-... .+.+
T Consensus 138 -g~~I--------------~EDNfv~Ql~~~gk~vvfl-------GDdTW~~LFp~~f~~s~s~pSfnv~DLdtVDn~v~ 195 (895)
T KOG2126|consen 138 -GPAI--------------AEDNFVRQLVLNGKSVVFL-------GDDTWTSLFPNQFNKSYSFPSFNVHDLDTVDNGVI 195 (895)
T ss_pred -Cccc--------------chhHHHHHHHHCCCeEEEe-------cCccHHHhChHhhcCCCCCCCCCCccccccchHHH
Confidence 1111 0134556777788876544 122222 1111110 111 00011 1122
Q ss_pred HHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCCCC
Q 046091 172 DTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVGTC 251 (423)
Q Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~~~ 251 (423)
+.+.+.+ .++.+|++..|+..+|+.||.+||+++++.+.+.++|+.|+++++.++ |||++||++||||+...
T Consensus 196 ~~if~~l---~s~dwdVlIAHfLGVDH~GHk~GPdH~~M~~KL~qmD~vI~~ii~~md-----edTlLvVmGDHGMt~nG 267 (895)
T KOG2126|consen 196 EKIFKSL---NSKDWDVLIAHFLGVDHCGHKHGPDHPEMADKLVQMDRVINEIIKKMD-----EDTLLVVMGDHGMTDNG 267 (895)
T ss_pred HHhhhhh---ccCchHHHHHHHhCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHhc-----cCeeEEEecCCCCCCCC
Confidence 3333333 477899999999999999999999999999999999999999999999 89999999999998764
No 17
>PRK09598 lipid A phosphoethanolamine transferase; Reviewed
Probab=99.66 E-value=5.9e-15 Score=146.15 Aligned_cols=187 Identities=14% Similarity=0.121 Sum_probs=124.6
Q ss_pred cCCCCcEEEEEECCCCCCCC-----CCCCCchHHH-HHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCccccccc
Q 046091 29 KLEKPVVLLVSSDGFRFGYQ-----FKTSTPNIHR-LINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFV 102 (423)
Q Consensus 29 ~~~~~~vv~I~iDgl~~d~~-----~~~~~P~l~~-l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~ 102 (423)
..++++||+|+.|+.|+|.. .+..||+|++ ++++|+.|.+++.+ .+.|.++..+|+||.++..+.
T Consensus 220 ~~~~~~vVlViGES~R~d~~slyGY~r~TTP~L~~~la~~~~~f~n~~S~--gt~T~~Slp~mls~~~~~~~~------- 290 (522)
T PRK09598 220 NHSKSVVVLVIGESARKHNYALYGYEKPTNPRLSKRLATHELTLFNATSC--ATYTTASLECILDSSFKNTSN------- 290 (522)
T ss_pred CCCCCEEEEEEECCccHhhcccCCCCCCCChhhhhhcccCceEEcceeeC--CCCHHHHHHHHccCCCccccc-------
Confidence 34678999999999998743 2568999987 45689999876554 678999999999998876532
Q ss_pred CCCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCC-----CCCCCCCcccccCCC-CC-ChHHHHHHHH
Q 046091 103 DPYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKK-----GSWNCPKGFCMNYNG-SV-PFEDRVDTVL 175 (423)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ 175 (423)
. .+++.+.++++|++|... +..... ..|.....+...... .. ..+..+..+.
T Consensus 291 -~-----------------~~nl~~ilk~aGy~T~W~---snq~g~~~~~~~~~~~~~~~~~~~~~~~~~~De~LL~~l~ 349 (522)
T PRK09598 291 -A-----------------YENLPTYLTRAGIKVFWR---SANDGEPNVKVTSYLKNYELIQKCPNCEAPYDESLLYNLP 349 (522)
T ss_pred -c-----------------cCCHHHHHHHCCCeEEEE---ECCCCCCCccceeeccchhccccCCCCCCCCHHHHHHHHH
Confidence 0 135678899999998543 221100 001000001001111 11 1233445555
Q ss_pred hhccCCCCCCCcEEEEcCCCCCCCC-C-c-------CCCC---------C-----HHHHHHHHHHHHHHHHHHHHHHHcC
Q 046091 176 SYFDLPSSEIPSFMTLYFEDPDHQG-H-K-------VGPD---------D-----PEITEAVARIDRMIGRLIDGIEKRG 232 (423)
Q Consensus 176 ~~~~~~~~~~p~~~~~~~~~~d~~~-h-~-------~g~~---------s-----~~~~~~~~~~D~~ig~ll~~l~~~~ 232 (423)
++++.. +++|.|+++|+.+.|.+. . . +.|. + ..|.+++.++|..|+++++.|++.+
T Consensus 350 ~~l~~~-~~~p~fivlH~~GSH~P~Y~~RyP~~f~~F~p~~~~~~l~~~~~~~~~n~YdnsI~ytD~~l~~ii~~Lk~~~ 428 (522)
T PRK09598 350 ELIKAS-SNENVLLILHLAGSHGPNYDNKYPLNFRVFKPVCSSVELSSCSKESLINAYDNTIFYNDYLLDKIISMLKNLK 428 (522)
T ss_pred HHHHhc-CCCCeEEEEeCcCCCCCcccccCChhhcccCCCCcchhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 666532 246899999999998741 1 1 1111 0 2478899999999999999999877
Q ss_pred CCCCeEEEEECCCCCC
Q 046091 233 VFEDVTIVMVGDHGMV 248 (423)
Q Consensus 233 ~~~~t~viitsDHG~~ 248 (423)
. ||.||++||||..
T Consensus 429 ~--~t~iIy~SDHGe~ 442 (522)
T PRK09598 429 Q--PALMIYLSDHGES 442 (522)
T ss_pred C--CeEEEEEccCccc
Confidence 5 9999999999974
No 18
>PRK10649 hypothetical protein; Provisional
Probab=99.66 E-value=1.8e-15 Score=152.15 Aligned_cols=188 Identities=13% Similarity=0.093 Sum_probs=122.1
Q ss_pred CCCCcEEEEEECCCCCCCC-----CCCCCchHHHHHH---cCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccc
Q 046091 30 LEKPVVLLVSSDGFRFGYQ-----FKTSTPNIHRLIN---NGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHF 101 (423)
Q Consensus 30 ~~~~~vv~I~iDgl~~d~~-----~~~~~P~l~~l~~---~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~ 101 (423)
.+++|||+|+.|+.|.+.+ .+..||+|++|++ +++.|++.+++ .+.|.++..+++|..... +
T Consensus 234 ~~p~niVlVIGES~r~d~~slyGY~r~TTP~Ld~l~~~~~~~~~F~n~~S~--~~~T~~Sl~~~LS~~~~~------~-- 303 (577)
T PRK10649 234 NAPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPGLTVFNNVVTS--RPYTIEILQQALTFADEK------N-- 303 (577)
T ss_pred CCCCeEEEEEEeccCHhhccccCCCCCCChhHHhhhccCCCeEEeCceecC--CcCHHHHHHHHccCCccc------c--
Confidence 3455899999999999853 2468999999998 88999887766 578999999999842111 0
Q ss_pred cCCCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCCCCCCCC----------Ccccc--cCCCCCC-hH
Q 046091 102 VDPYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKKGSWNCP----------KGFCM--NYNGSVP-FE 168 (423)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~----------~~~~~--~~~~~~~-~~ 168 (423)
+ ..|...+++.+.++++||+|..+ +.....+.+... ..+.. ....... .+
T Consensus 304 --~------------~~~~~~~~l~~llk~aGY~T~wi---sNq~~~~~~~~~~~~~~~~~d~~~f~~~~~~~~~~~~D~ 366 (577)
T PRK10649 304 --P------------DLYLTQPSLMNMMKQAGYKTFWI---TNQQTMTARNTMLTVFSRQTDKQYYMNQQRTQNAREYDT 366 (577)
T ss_pred --h------------hhhccCCCHHHHHHHCCCeEEEE---eCCccccccchhhhHhhhhccchhhccccccCCCCCcHH
Confidence 0 01112357889999999999643 221111111100 00100 0011111 22
Q ss_pred HHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCc--------CCCCC---------------HHHHHHHHHHHHHHHHHH
Q 046091 169 DRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHK--------VGPDD---------------PEITEAVARIDRMIGRLI 225 (423)
Q Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~--------~g~~s---------------~~~~~~~~~~D~~ig~ll 225 (423)
+.+....++++ ...+|.|+++|+.+.|..-.. +.+.. ..|.+++.++|..||+++
T Consensus 367 ~LL~~l~~~L~--~~~~~~fivlHl~GsH~~Y~~RyP~~~~~F~~~~~~~~~~~~~~~~~~~~~Y~nsI~y~D~~l~~ii 444 (577)
T PRK10649 367 NVLKPFSEVLA--DPAPKKFIIVHLLGTHIKYKYRYPENQGKFDDRTGHVPPGLNADELESYNDYDNANLYNDHVVASLI 444 (577)
T ss_pred HHHHHHHHHHh--ccCCCcEEEEEecCCCcchhhhCCHHHhcCCCCCCcccccccchHHHHHHhhhHHHHHHHHHHHHHH
Confidence 23344445553 234678899999999875311 21110 258899999999999999
Q ss_pred HHHHHcCCCCCeEEEEECCCCCC
Q 046091 226 DGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 226 ~~l~~~~~~~~t~viitsDHG~~ 248 (423)
+.|++.+ +||+||++||||..
T Consensus 445 ~~Lk~~~--~nt~iiy~SDHGe~ 465 (577)
T PRK10649 445 KDFKATD--PNGFLVYFSDHGEE 465 (577)
T ss_pred HHHhcCC--CCeEEEEECCCCcc
Confidence 9999874 89999999999985
No 19
>KOG2124 consensus Glycosylphosphatidylinositol anchor synthesis protein [Signal transduction mechanisms]
Probab=99.62 E-value=2.4e-15 Score=149.46 Aligned_cols=209 Identities=20% Similarity=0.216 Sum_probs=122.8
Q ss_pred CCCcEEEEEECCCCCCCCC---C-CCCchHHHHH-HcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCC
Q 046091 31 EKPVVLLVSSDGFRFGYQF---K-TSTPNIHRLI-NNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPY 105 (423)
Q Consensus 31 ~~~~vv~I~iDgl~~d~~~---~-~~~P~l~~l~-~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~ 105 (423)
..++.++++.||+|+|... . ...|+|+.+. ++|.+-.. .+. .||.|.|+|.+|..|-|+....+......+|.
T Consensus 42 pA~RLvl~v~DGLRAd~~~~~~~~s~ap~LR~ii~~qg~~GiS-~tr-~PTeSRpghvAliaGfyedpSAvtkgwk~NPv 119 (883)
T KOG2124|consen 42 PAKRLVLFVGDGLRADTLFEPNCESRAPFLRSIILNQGTVGIS-HTR-VPTESRPGHVALIAGFYEDPSAVTKGWKSNPV 119 (883)
T ss_pred hHHhEEEEcccccchhhhcCccccccCCcHHHHHHhcCccccc-ccC-CCCCCCCCcEEEEeccccChHHhhhhhhcCCc
Confidence 3446899999999999432 2 3789999986 66777653 333 39999999999999999987766553333332
Q ss_pred CCC-eeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCCCCCCCCCcccccCCCCCChHHHHHHHHhhccC----
Q 046091 106 TGD-TFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKKGSWNCPKGFCMNYNGSVPFEDRVDTVLSYFDL---- 180 (423)
Q Consensus 106 ~~~-~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 180 (423)
.-+ .|+....... |..+-+-..+.+.+-++. ++..+....+... .....+.-.-+.++...++...
T Consensus 120 ~FDsvFN~S~~t~~-~gs~dil~~fs~~~~~v~---~~~y~~~~~~~~~-----d~~~lD~WvFd~~~~l~~~~~~~~~L 190 (883)
T KOG2124|consen 120 NFDSVFNRSRHTYS-FGSPDILPMFSEDLSHVD---TPMYDHELEDFDS-----DAIELDEWVFDRVDDLLHNSTNDQEL 190 (883)
T ss_pred hhhhhhhhhhhhhc-ccCcccchhhhcCCCccC---ccccchhHhhccc-----cccccchhhhhhHHHHHhhhhcchhH
Confidence 211 1111000001 111111111111111111 1110000000000 0000000001122333332211
Q ss_pred --CCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCCC
Q 046091 181 --PSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVGT 250 (423)
Q Consensus 181 --~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~~ 250 (423)
.....--.+++|+.+.|..+|.+.|++.+|++.++++|+.|.++.+..++--..+.|..++|+||||++.
T Consensus 191 ~~~~~~~kvVfflhLlg~dt~gH~~~P~s~~y~~nl~~~d~~i~~~y~l~e~~fnD~kTayi~TaDhgms~~ 262 (883)
T KOG2124|consen 191 RDLLHQDKIVFFLHLLGIDTAGHAHRPYSVEYRENLKYTDKGIRELYDLFENYFNDGKTAYIFTADHGMSDF 262 (883)
T ss_pred HHhhccCceEEEEeecCcCccccccCCCcHHHHHHhhcCCccHHHHHHHHHHHhcCCcceEEEehhcccccc
Confidence 0112235678999999999999999999999999999999999999998854478999999999999864
No 20
>PRK05362 phosphopentomutase; Provisional
Probab=99.53 E-value=1.3e-13 Score=130.41 Aligned_cols=109 Identities=15% Similarity=0.181 Sum_probs=80.1
Q ss_pred cchhhhHhhcCCcEEEeecCCCCcCCCCCCCCCcccccCCCCCChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCC-CC
Q 046091 123 EPLWETVTNHGLKAATYFWPGSEVKKGSWNCPKGFCMNYNGSVPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQ-GH 201 (423)
Q Consensus 123 ~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~-~h 201 (423)
+|+++.|+++|+.+..+.-...-+... .+ ..........+.++.+++.++. .++++|+++++.++|.. ||
T Consensus 224 ~Tl~d~L~~aG~~v~~VGki~DiFa~~------G~-t~~~~~~~~~~~~~~ale~L~~--~~~~~fvfvn~~~~D~~~GH 294 (394)
T PRK05362 224 PTVLDKLKEAGGEVIAVGKIADIFAGQ------GI-TEKVKTKSNMDGMDATIEEMKE--AGDNGLVFTNLVDFDSLYGH 294 (394)
T ss_pred CCHHHHHHHCCCeEEEEEehhhcccCC------Cc-ccccCCCCHHHHHHHHHHHHHh--CCCCcEEEEecccCccccCC
Confidence 578999999999987763221111100 11 1111223445677777777752 45689999999999985 99
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCC
Q 046091 202 KVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGM 247 (423)
Q Consensus 202 ~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~ 247 (423)
..++ ..|.++++.+|+.|++|++.|+ ++++||||||||+
T Consensus 295 ~~~~--~~y~~ale~~D~~lg~ll~~L~-----~~tlliiTaDHG~ 333 (394)
T PRK05362 295 RRDV--AGYAAALEEFDARLPELLAALK-----EDDLLIITADHGN 333 (394)
T ss_pred cCCH--HHHHHHHHHHHHHHHHHHHHhc-----cCCEEEEeCCCCC
Confidence 8754 7899999999999999999997 4799999999997
No 21
>TIGR01696 deoB phosphopentomutase. This protein is involved in the purine and pyrimidine salvage pathway. It catalyzes the conversion of D-ribose 1-phosphate to D-ribose 5-phosphate and the conversion of 2-deoxy-D-ribose 1-phosphate to 2-deoxy-D-ribose 5-phosphate. The seed members of this protein are characterized deoB proteins from E.Coli and Bacillus. This model matches pfam01676 for Metalloenzyme superfamily.
Probab=99.51 E-value=3.1e-13 Score=126.57 Aligned_cols=108 Identities=16% Similarity=0.197 Sum_probs=79.8
Q ss_pred cchhhhHhhcCCcEEEeecCCCCcCCCCCCCCCcccccCCCCCChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCC-CCC
Q 046091 123 EPLWETVTNHGLKAATYFWPGSEVKKGSWNCPKGFCMNYNGSVPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDH-QGH 201 (423)
Q Consensus 123 ~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~-~~h 201 (423)
+|+++.++++|+.+..+.-....+.... . ..........+.++.+++.++ +..++|+++|+.++|. .||
T Consensus 217 pTvld~l~~aG~~V~~VGki~DiF~g~G------l-t~a~~~~~~~~~~~~~l~aL~---~~~~~lif~nl~d~D~~~GH 286 (381)
T TIGR01696 217 PTVLQKLKDEGHDVISIGKIADIYDGEG------I-TKKVRTTSNMDGMDATIKEMK---EDFTGISFTNLVDFDALWGH 286 (381)
T ss_pred CCHHHHHHHCCCeEEEEccHHhEecCCC------c-ccccCCCCHHHHHHHHHHHHh---cCCCCEEEEEeCCCccccCC
Confidence 5788999999998877632111111000 0 111133345667778777775 3457899999999996 799
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCC
Q 046091 202 KVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGM 247 (423)
Q Consensus 202 ~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~ 247 (423)
.. +++.|.++++.+|+.|++|++.|+ ++++||||||||+
T Consensus 287 ~~--d~~~y~~ale~vD~~Lg~ll~~L~-----~~tllIITADHG~ 325 (381)
T TIGR01696 287 RR--DVAGYAAALELFDRRLPELFSLLR-----EDDLLIITADHGN 325 (381)
T ss_pred CC--CHHHHHHHHHHHHHHHHHHHHHhc-----cCCEEEEECCCCC
Confidence 86 678999999999999999999997 5789999999998
No 22
>PRK05434 phosphoglyceromutase; Provisional
Probab=99.50 E-value=3.8e-13 Score=131.43 Aligned_cols=108 Identities=24% Similarity=0.397 Sum_probs=79.1
Q ss_pred CCcEEEeecCCCCcCCCC----CCCCCcccccCC--CCCChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCC
Q 046091 133 GLKAATYFWPGSEVKKGS----WNCPKGFCMNYN--GSVPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPD 206 (423)
Q Consensus 133 G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~ 206 (423)
++....++|++.....-. ...+......|. ...+..+.++.++++++ +++++|++++|..+|.+||..+
T Consensus 332 k~ahvt~f~~GG~~~~~~~e~r~~~~s~~va~yd~~p~Ms~~e~~d~~i~~l~---~~~~Dfv~vnf~~~D~vGHtg~-- 406 (507)
T PRK05434 332 KYAHVTFFFNGGREEPFPGEDRILIPSPKVATYDLKPEMSAYEVTDKLVEAIE---SGKYDFIILNFANPDMVGHTGN-- 406 (507)
T ss_pred CCCeEEEecCCCcCCCCCCceeeecCCceeecccCCCCCcHHHHHHHHHHHHh---ccCCCEEEEEecCcchhhcCCC--
Confidence 466677889876322111 111111112232 23455677888888885 5679999999999999999864
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 207 DPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 207 s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
.+++.++++.+|++||+|++.+++.+. +||||||||...
T Consensus 407 ~~a~~~AIe~vD~~LGrll~aLk~~g~----ivIITADHGn~e 445 (507)
T PRK05434 407 LEAAVKAVEAVDECLGRVVDAVLKVGG----TLLITADHGNAE 445 (507)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEEcCCCccc
Confidence 578999999999999999999988754 899999999853
No 23
>PRK11598 putative metal dependent hydrolase; Provisional
Probab=99.50 E-value=9.3e-13 Score=130.97 Aligned_cols=188 Identities=11% Similarity=0.110 Sum_probs=118.5
Q ss_pred CCCc-EEEEEECCCCCCCC-----CCCCCchHHHHHHcCc-ccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccC
Q 046091 31 EKPV-VLLVSSDGFRFGYQ-----FKTSTPNIHRLINNGT-EAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVD 103 (423)
Q Consensus 31 ~~~~-vv~I~iDgl~~d~~-----~~~~~P~l~~l~~~G~-~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~ 103 (423)
.+|+ ||+|+-|..|.+.. .+..+|.|.+ +++ .|++.+.+ .+.|.++..+|+|+..+..+.-.
T Consensus 232 ~~~~~vVlViGESaR~~~~slyGY~r~TtP~L~~---~~~~~F~~~~S~--gt~T~~Svp~mfS~~~~~~y~~~------ 300 (545)
T PRK11598 232 KRKNLTILVVGETSRAENFSLGGYPRETNPRLAK---DNVIYFPHTTSC--GTATAVSVPCMFSNMPRKHYDEE------ 300 (545)
T ss_pred CCCcEEEEEehhhHHHhhcCCCCCCCCCCccccc---cCceeecccccC--ccchHHHHHHHhcccccccccch------
Confidence 3555 78889999998843 3467899764 455 57765544 67899999999999876433210
Q ss_pred CCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCC-CCCC-CC-Cccc----cc-CCCCC-ChHHHHHHH
Q 046091 104 PYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKK-GSWN-CP-KGFC----MN-YNGSV-PFEDRVDTV 174 (423)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~-~~~~-~~-~~~~----~~-~~~~~-~~~~~~~~~ 174 (423)
. +...+++.+.++++|+++. |....... +.+. .+ .... .. ..... ..+..++.+
T Consensus 301 --~------------~~~~~~l~d~l~~aG~~t~---W~~Nq~g~~g~~~r~~~~~~~~~~~~~~~~~~~~~De~LL~~l 363 (545)
T PRK11598 301 --L------------AHHQEGLLDIIQRAGINVL---WNDNDGGCKGACDRVPHQDVTALNLPGQCIDGECYDEVLFHGL 363 (545)
T ss_pred --h------------hhhcccHHHHHHHcCCeEE---eecCCCCCcchhcccchhhhhhhccccccCCCCccHHHHHHHH
Confidence 0 0012478899999999983 44322111 0000 00 0000 00 01111 122334555
Q ss_pred HhhccCCCCCCCcEEEEcCCCCCCCC--CcC-------CCC--------------CHHHHHHHHHHHHHHHHHHHHHHHc
Q 046091 175 LSYFDLPSSEIPSFMTLYFEDPDHQG--HKV-------GPD--------------DPEITEAVARIDRMIGRLIDGIEKR 231 (423)
Q Consensus 175 ~~~~~~~~~~~p~~~~~~~~~~d~~~--h~~-------g~~--------------s~~~~~~~~~~D~~ig~ll~~l~~~ 231 (423)
.++++. .+++.|+++|+.+.|.+. +.| .|. ...|.+++.++|..||++++.|++.
T Consensus 364 ~~~L~~--~~~~~fivLH~~GSH~P~Y~~RyP~~~~~F~p~~~~~~~~~~~~~~~~n~YdnsI~ytD~~lg~ii~~Lk~~ 441 (545)
T PRK11598 364 ENYINN--LQGDGVIVLHTIGSHGPTYYNRYPPQFRKFTPTCDTNEIQTCTQQQLVNTYDNTILYVDYIVDKAINLLKQH 441 (545)
T ss_pred HHHHHh--cCCCeEEEEeCCCCCCcchhhcCChhhccCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 555542 234579999999999752 111 111 1247899999999999999999999
Q ss_pred CCCCCeEEEEECCCCCC
Q 046091 232 GVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 232 ~~~~~t~viitsDHG~~ 248 (423)
+..+||+||++||||..
T Consensus 442 ~~~~nT~iIy~SDHGe~ 458 (545)
T PRK11598 442 QDKFNTSLVYLSDHGES 458 (545)
T ss_pred CCcCCeEEEEECcCCCc
Confidence 99999999999999974
No 24
>cd00016 alkPPc Alkaline phosphatase homologues; alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity.
Probab=99.47 E-value=2.6e-12 Score=122.81 Aligned_cols=78 Identities=15% Similarity=0.177 Sum_probs=65.9
Q ss_pred CChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECC
Q 046091 165 VPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGD 244 (423)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsD 244 (423)
..+.+.++.+++.++ ++++++|+++....+|+.+|... ...+.+.+.++|+.|+.+++.++. .++|+||||||
T Consensus 231 psL~emt~~al~~L~--~~~~gFfl~ve~~~iD~~gH~~d--~~~~~~~l~~~D~av~~~l~~l~~---~~dTLiIvTAD 303 (384)
T cd00016 231 PSLAEMTEKAIDVLS--KNPNGFFLMVEGGRIDHAHHAND--AAGALSETLAFDDAVEAALDFAKK---DGDTLVVVTAD 303 (384)
T ss_pred CCHHHHHHHHHHHHH--hcCCcEEEEEeCCCCCcccCCCc--HHHHHHHHHHHHHHHHHHHHHhhC---CCCeEEEEECC
Confidence 456677888888885 34578999999999999999873 457899999999999999999973 37999999999
Q ss_pred CCCCC
Q 046091 245 HGMVG 249 (423)
Q Consensus 245 HG~~~ 249 (423)
||...
T Consensus 304 Hg~~~ 308 (384)
T cd00016 304 HSHGG 308 (384)
T ss_pred CCCCc
Confidence 99864
No 25
>PRK11560 phosphoethanolamine transferase; Provisional
Probab=99.47 E-value=3.7e-12 Score=126.71 Aligned_cols=189 Identities=13% Similarity=0.188 Sum_probs=115.0
Q ss_pred CCCcEEEEEECCCCCCCC-----CCCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCC
Q 046091 31 EKPVVLLVSSDGFRFGYQ-----FKTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPY 105 (423)
Q Consensus 31 ~~~~vv~I~iDgl~~d~~-----~~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~ 105 (423)
++++||+|+-|+.|.+.. .+..||+|++ ++|+.+.+.+ ++ .+.|..+..+|+++..... +++
T Consensus 246 ~~~~vVlViGESaRad~~slyGY~r~TtP~L~~--~~~~~~f~~~-S~-gt~T~~Slp~mfs~~~~~~--------~~~- 312 (558)
T PRK11560 246 DDTYVVFIIGETTRWDHMGILGYERNTTPKLAQ--EKNLAAFRGY-SC-DTATKLSLRCMFVREGGAE--------DNP- 312 (558)
T ss_pred CCCEEEEEEEcccCHhhcccCCCCCCCCcchHh--cCCEEEecCc-cC-CccchhhhHHHhcCCCccc--------cch-
Confidence 556888999999999854 4678999998 3465433344 33 6889999999998854320 110
Q ss_pred CCCeeecCCCCCcccCCcchhhhHhhcCCcEEEe-----ecCCCCcCCCCCCCCCccc-ccC-CCCCChH-HHHHHHHhh
Q 046091 106 TGDTFTMASHEPKWWLGEPLWETVTNHGLKAATY-----FWPGSEVKKGSWNCPKGFC-MNY-NGSVPFE-DRVDTVLSY 177 (423)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~-~~~~~~~~~ 177 (423)
.++...+.+.+.++++|+++..+ .|-................ ... .+....+ ..++.+.++
T Consensus 313 -----------~~~~~~~nlld~l~~aGy~t~w~SnQ~~~w~~n~~~~~~~~~~~~~~~~~~~~g~~~~D~~LL~~l~~~ 381 (558)
T PRK11560 313 -----------QRTLKEQNVFAVLKQLGFSSELFAMQSEMWFYNNTMADNYAYREQIGAEPRNRGKPVDDMLLVDEMKQS 381 (558)
T ss_pred -----------hhhcccCCHHHHHHHCCCcEEEeecccceeeecCcccccchhhhhcccccCCCCCCcChHHHHHHHHHH
Confidence 11222457889999999998544 2322111100000000000 000 1111122 234445556
Q ss_pred ccCCCCCCCcEEEEcCCCCCCCCCc--------CCCC--------C-----HHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 046091 178 FDLPSSEIPSFMTLYFEDPDHQGHK--------VGPD--------D-----PEITEAVARIDRMIGRLIDGIEKRGVFED 236 (423)
Q Consensus 178 ~~~~~~~~p~~~~~~~~~~d~~~h~--------~g~~--------s-----~~~~~~~~~~D~~ig~ll~~l~~~~~~~~ 236 (423)
++...+ +..|+++|+.++|..-.. |.|. + ..|.+++.++|..||++++.|++ +|
T Consensus 382 L~~~~~-~~~~ivLH~~GSH~~Y~~RyP~~f~~F~p~~~~~~~~c~~~~~~n~YdnsI~ytD~~lg~ii~~Lk~----~n 456 (558)
T PRK11560 382 LGRNPD-GKHLIILHTKGSHYNYTQRYPRSFARYQPECIGVDSGCSKAQLINSYDNSVLYVDHFISSVIDQLRD----KK 456 (558)
T ss_pred HHhcCC-CCeEEEEeccCCCcChhhcCCHhhhccCCcCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh----cC
Confidence 543222 236789999999864321 1111 1 23889999999999999999997 58
Q ss_pred eEEEEECCCCCC
Q 046091 237 VTIVMVGDHGMV 248 (423)
Q Consensus 237 t~viitsDHG~~ 248 (423)
|+||++||||..
T Consensus 457 TivIy~SDHGe~ 468 (558)
T PRK11560 457 AIVFYAADHGES 468 (558)
T ss_pred eEEEEEcCCCCc
Confidence 999999999985
No 26
>PF01676 Metalloenzyme: Metalloenzyme superfamily; InterPro: IPR006124 This domain unites alkaline phosphatase, N-acetylgalactosamine-4-sulphatase, and cerebroside sulphatase, enzymes with known three-dimensional structures, with phosphopentomutase, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, phosphoglycerol transferase, phosphonate monoesterase, streptomycin-6-phosphate phosphatase, alkaline phosphodiesterase/nucleotide pyrophosphatase PC-1, and several closely related sulphatases. This domain is also related to alkaline phosphatase IPR001952 from INTERPRO []. The most conserved residues are probably involved in metal binding and catalysis.; GO: 0003824 catalytic activity, 0046872 metal ion binding; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3UN5_F 3UN3_B 3M8Y_C 3UO0_B 3UN2_B 3UNY_E ....
Probab=99.42 E-value=1.2e-13 Score=125.37 Aligned_cols=71 Identities=27% Similarity=0.520 Sum_probs=59.8
Q ss_pred HHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 170 RVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
.++.+++.++ +.+++|+++++..+|..||... -++|.++++.+|+.|++|++.+++ +++++|||||||...
T Consensus 128 ~~~~~~~~l~---~~~~~~v~~~~~~~D~~GH~~~--~~~~~~~ie~~D~~l~~l~~~~~~----~~~~liiTaDHg~~~ 198 (252)
T PF01676_consen 128 IAEAAIEALK---KDKYDFVFVHVKGTDEAGHRGD--PEAYIEAIERIDRFLGRLLEALDK----EDDLLIITADHGNDE 198 (252)
T ss_dssp HHHHHHHHHH---HTTSSEEEEEEEHHHHHHTTT---HHHHHHHHHHHHHHHHHHHHHHHH----TTEEEEEEESSBSTT
T ss_pred HHHHHHHhhh---cccCCeEEEeecCcchhhccCC--HHHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEECCCCCcc
Confidence 3566777663 4578899999999999999863 478999999999999999999965 679999999999843
No 27
>PRK12383 putative mutase; Provisional
Probab=99.37 E-value=6.5e-12 Score=118.97 Aligned_cols=71 Identities=24% Similarity=0.458 Sum_probs=61.0
Q ss_pred hHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCC
Q 046091 167 FEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHG 246 (423)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG 246 (423)
..+.++.+++.++ +..++|+++|+.++|..||...+ +.|.++++.+|+.|++|++.|+ ++++||||||||
T Consensus 271 t~~~~~~~l~aL~---~~~~dlvfvnl~~~D~~GH~~d~--~~y~~aiE~iD~~lg~ll~~L~-----~~~lliITaDHG 340 (406)
T PRK12383 271 TQRVMDITLDEFN---THPTAFICTNIQETDLAGHAEDV--ARYAERLEVVDRNLARLLEAMT-----PDDCLVVMADHG 340 (406)
T ss_pred HHHHHHHHHHHHh---cCCCCEEEEeccCCccccccCCH--HHHHHHHHHHHHHHHHHHHHhc-----cCCEEEEEcCCC
Confidence 3466777777774 34579999999999999999865 7899999999999999999997 588999999999
Q ss_pred C
Q 046091 247 M 247 (423)
Q Consensus 247 ~ 247 (423)
.
T Consensus 341 ~ 341 (406)
T PRK12383 341 N 341 (406)
T ss_pred C
Confidence 6
No 28
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=99.37 E-value=1.4e-11 Score=119.63 Aligned_cols=75 Identities=25% Similarity=0.426 Sum_probs=64.0
Q ss_pred CChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECC
Q 046091 165 VPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGD 244 (423)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsD 244 (423)
....+.++.++++++ +++|+|++++|..+|..||.. ..+++.++++.+|++||+|++.|++.+. +||||||
T Consensus 364 Msa~evtd~~i~~I~---~~k~dfi~vnfan~DmvGHtg--~~~a~v~AIE~vD~~LGrIl~aLke~G~----~VIiTAD 434 (501)
T TIGR01307 364 MSAKAVTDAVLEAIA---QGKFDLIVVNFANPDMVGHTG--NFEAAIKAVEALDVCLGRIVEACKKVGG----TLFLTAD 434 (501)
T ss_pred cCHHHHHHHHHHHHh---ccCCCEEEEECCCcccccCCC--CHHHHHHHHHHHHHHHHHHHHHHHhCCC----EEEEEcC
Confidence 445567788888884 568999999999999999975 3458999999999999999999998763 6999999
Q ss_pred CCCC
Q 046091 245 HGMV 248 (423)
Q Consensus 245 HG~~ 248 (423)
||..
T Consensus 435 HGna 438 (501)
T TIGR01307 435 HGNA 438 (501)
T ss_pred CCCh
Confidence 9974
No 29
>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Probab=99.26 E-value=1.7e-10 Score=112.48 Aligned_cols=75 Identities=16% Similarity=0.188 Sum_probs=63.6
Q ss_pred CChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECC
Q 046091 165 VPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGD 244 (423)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsD 244 (423)
.+..+..+.+++.+. .++.+|++++|..+|.+||.- ..+++.++++.+|++|++|++.+++. +..+|||||
T Consensus 403 MSA~eVtd~~i~~i~---~~~ydfi~vNfan~DmvGHtG--~~ea~ikAIE~vD~~Lg~Il~al~~~----g~~liITAD 473 (558)
T PLN02538 403 MKALEIAEKARDALL---SGKFDQVRVNLANGDMVGHTG--DLEATIVACEAVDAAVKEILDAVEQV----GGIYLVTAD 473 (558)
T ss_pred CCHHHHHHHHHHHHh---cCCCCEEEEeccCcccccCCC--CHHHHHHHHHHHHHHHHHHHHHHHhc----CCEEEEeCC
Confidence 344566788888874 567999999999999999975 56789999999999999999999764 478999999
Q ss_pred CCCC
Q 046091 245 HGMV 248 (423)
Q Consensus 245 HG~~ 248 (423)
||-.
T Consensus 474 HGNa 477 (558)
T PLN02538 474 HGNA 477 (558)
T ss_pred CCCc
Confidence 9964
No 30
>PF02995 DUF229: Protein of unknown function (DUF229); InterPro: IPR004245 Members of this family are uncharacterised with a long conserved region that may contain several domains.
Probab=99.08 E-value=2.6e-09 Score=106.23 Aligned_cols=196 Identities=19% Similarity=0.322 Sum_probs=113.1
Q ss_pred cCCCCcEEEEEECCCCCCCCCCCCCchHHHHHH-cCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCCC
Q 046091 29 KLEKPVVLLVSSDGFRFGYQFKTSTPNIHRLIN-NGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYTG 107 (423)
Q Consensus 29 ~~~~~~vv~I~iDgl~~d~~~~~~~P~l~~l~~-~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~ 107 (423)
..++++|++|++|+++..-.. ..+|-..++++ .|.+.-.++..+ ...|.|+..+|+||..-....+...... ..
T Consensus 123 ~~~~~sV~ilgiDS~Sr~~f~-R~mPkT~~~l~~~~~~~f~gyn~v-gdnt~~Nl~alltG~~~~~~~~~~~~~~-~~-- 197 (497)
T PF02995_consen 123 SESKPSVLILGIDSMSRMNFR-RSMPKTVKFLRELGAVEFKGYNKV-GDNTFPNLMALLTGKIFSEKELKADCNK-PY-- 197 (497)
T ss_pred cCCCCcEEEEEeeccChhhhh-hcCcHHHHHHHhCCCEEEcccccc-CCCcHHHHHHHHhcCCCCchhhcccccc-cc--
Confidence 567899999999999865433 45666555554 454333355544 6889999999999961111111110000 00
Q ss_pred CeeecCCCCCccc-CCcchhhhHhhcCCcEEEe-ecCCCCcC---CCCCCCCC--ccccc-------------------C
Q 046091 108 DTFTMASHEPKWW-LGEPLWETVTNHGLKAATY-FWPGSEVK---KGSWNCPK--GFCMN-------------------Y 161 (423)
Q Consensus 108 ~~~~~~~~~~~~~-~~~~i~~~~~~~G~~~~~~-~~~~~~~~---~~~~~~~~--~~~~~-------------------~ 161 (423)
....+ .-+-||...+++||.|+.. .|+..... ..++..++ .|..+ .
T Consensus 198 --------~~~~~d~~~~iw~~fk~~GY~T~~~ED~~~~~~f~y~~~GF~~~ptDhy~rpf~~~~e~~~~~~~~~~~~C~ 269 (497)
T PF02995_consen 198 --------CKGYLDKCPFIWKDFKKAGYVTAYAEDWPSIGTFNYRKKGFKKQPTDHYLRPFMLAAEKHLNKFRRFGLKCL 269 (497)
T ss_pred --------CCCCcccccHHHHHHhhcCceEEEecCcccccccccCCCCCCCCCCCcccchHHHHHHHhccceeccCCCcc
Confidence 00001 1256999999999998753 23322111 11111111 11110 0
Q ss_pred CCCCChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE
Q 046091 162 NGSVPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVM 241 (423)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~vii 241 (423)
..........+-+.+++.. -.+.|.|.++++... .| .....+..+|..+-++++.+.+.|+++||+|||
T Consensus 270 g~~~~~~~~~dy~~~f~~~-y~~~~~F~~~w~~~~---~h-------~~~~~~~~~D~~~~~~l~~~~~~g~l~nT~vi~ 338 (497)
T PF02995_consen 270 GGRESHEYLLDYIEQFMEA-YKDRPKFGFFWFNSL---SH-------DDFNGPSSLDDDLLDFLEKLQEEGVLDNTFVIF 338 (497)
T ss_pred CchHHHHHHHHHHHHHHHH-hhccceeeEEEeccc---cc-------cccchhHHHHHHHHHHHHHhhhcCcccccEEEE
Confidence 0111111122333333322 135677887777654 22 334577889999999999999999999999999
Q ss_pred ECCCCCC
Q 046091 242 VGDHGMV 248 (423)
Q Consensus 242 tsDHG~~ 248 (423)
.||||.-
T Consensus 339 ~SDHG~R 345 (497)
T PF02995_consen 339 MSDHGLR 345 (497)
T ss_pred EcCCCcc
Confidence 9999985
No 31
>COG1368 MdoB Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]
Probab=99.02 E-value=5.6e-09 Score=107.61 Aligned_cols=203 Identities=19% Similarity=0.228 Sum_probs=115.3
Q ss_pred hcCCCCcEEEEEECCCCCCCC-----CCCCCchHHHHHHcC--cccCCCcccCCCCCCchhHHHHhhcCCcCCCCccccc
Q 046091 28 KKLEKPVVLLVSSDGFRFGYQ-----FKTSTPNIHRLINNG--TEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNH 100 (423)
Q Consensus 28 ~~~~~~~vv~I~iDgl~~d~~-----~~~~~P~l~~l~~~G--~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~ 100 (423)
...++||||+|.++++.--.. ....||++++|.+++ .++.+.+..+--..|.-+.+.+.+-.+|..-|+.-..
T Consensus 257 g~~~~~nvIvi~lES~~~~~~~~~~~g~~vtP~ln~l~~~~~s~~f~~ff~~~~~~~~~~ae~~~~~s~~~~~~~~~~~~ 336 (650)
T COG1368 257 GEAKGPNVIVIQLESFQGFLINPKVNGIEVTPNLNKLQKGGVSLLFSNFFGGVTAGSTFDAETGVLSSLFPAARGSVFQT 336 (650)
T ss_pred cccCCCcEEEEEeccccchheeccccCCCCCCcHHHHhccCchhHHHHHHhhcCCCCcccchhhhccCCCCCccCceeee
Confidence 356789999999999984322 246899999999997 4444333322112233333333333344433332221
Q ss_pred ccCCCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCC-----CCCCCCCccc-ccCC--------CCCC
Q 046091 101 FVDPYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKK-----GSWNCPKGFC-MNYN--------GSVP 166 (423)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~--------~~~~ 166 (423)
..+.. -..+...++++||+++.++--...... ..+.....+. ..++ -...
T Consensus 337 ~~~~~----------------~~slp~iLk~~GY~t~a~hg~~~~fwNr~~~yk~~Gfd~f~~~~~~~~~~~~~~~~G~s 400 (650)
T COG1368 337 YGDNK----------------YSSLPAILKQQGYKTAALHGGDGSFWNRKSFYKIFGFDDFFDLESFDGNADSEIGWGLS 400 (650)
T ss_pred cCCCC----------------cccHHHHHhcCCceEEEEeCCCcceecHHHHHHhcChhhccchhhcCCCcccccCCCCc
Confidence 11110 135677899999999876411110000 0000111000 0111 1122
Q ss_pred hHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCC-------C-CcCCC------CCHHHHHHHHHHHHHHHHHHHHHHHcC
Q 046091 167 FEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQ-------G-HKVGP------DDPEITEAVARIDRMIGRLIDGIEKRG 232 (423)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~-------~-h~~g~------~s~~~~~~~~~~D~~ig~ll~~l~~~~ 232 (423)
.....+++...++. .++|+|.++-....|.+ . |.... .-..|.+++++.|++++++++.++++|
T Consensus 401 D~~l~~~~~~~l~~--~~~Pfy~~~iTlsnH~Pf~~~~~~~~~~~~~~~~~~~~l~~y~~~~~y~D~al~~F~~~lkk~~ 478 (650)
T COG1368 401 DKDLFKESLPLLKK--LKKPFFSFVITLSNHGPFELPEGKRNELLEEPLSASTALANYLQAVHYADEALGQFIDKLKKSG 478 (650)
T ss_pred hHHHHHHHHHHHHh--cCCChHheEEeccCCCCCCCChhhhcccccccCcCcccccchhhhhhhHHHHHHHHHHHHHhcC
Confidence 23445666666653 34577766544433322 1 11211 234678899999999999999999999
Q ss_pred CCCCeEEEEECCCCCC
Q 046091 233 VFEDVTIVMVGDHGMV 248 (423)
Q Consensus 233 ~~~~t~viitsDHG~~ 248 (423)
++++|++|+++||.-.
T Consensus 479 ~~~~sviv~~GDH~~~ 494 (650)
T COG1368 479 LYKNSVIVLYGDHYGI 494 (650)
T ss_pred CCCCcEEEEECCCCCc
Confidence 9999999999999874
No 32
>COG1785 PhoA Alkaline phosphatase [Inorganic ion transport and metabolism]
Probab=98.84 E-value=1.3e-07 Score=90.63 Aligned_cols=80 Identities=15% Similarity=0.240 Sum_probs=66.4
Q ss_pred CCChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEC
Q 046091 164 SVPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVG 243 (423)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viits 243 (423)
...+.+.++.+++.+. ++++.||++|.=..+|+.+|..-+ ......+..+|+.+...++..++. .+|+||+|+
T Consensus 279 ~PsLaeMt~kAi~~L~--kn~~GFFLMVEGg~ID~a~Hand~--~~~i~e~~~fd~Avq~al~fA~k~---~~TLVIvTA 351 (482)
T COG1785 279 EPSLAEMTEKAIDLLS--KNKKGFFLMVEGGRIDWAGHANDP--AGAIGETVAFDEAVQAALDFAEKD---GNTLVIVTA 351 (482)
T ss_pred CCcHHHHHHHHHHHhc--cCCCceEEEEeccccchhhcCcCH--HHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEEec
Confidence 3455667788888765 567899999999999999998754 356778899999999999999977 699999999
Q ss_pred CCCCCCC
Q 046091 244 DHGMVGT 250 (423)
Q Consensus 244 DHG~~~~ 250 (423)
||-....
T Consensus 352 DH~tgg~ 358 (482)
T COG1785 352 DHETGGL 358 (482)
T ss_pred cccCCce
Confidence 9987643
No 33
>COG1015 DeoB Phosphopentomutase [Carbohydrate transport and metabolism]
Probab=98.78 E-value=9.4e-08 Score=87.43 Aligned_cols=111 Identities=19% Similarity=0.237 Sum_probs=74.8
Q ss_pred cchhhhHhhcCCcEEEeecCCCCcCCCCCCCCCcccccCCCCCChHHHHHHHHhhccCCCCCCCcEEEEcCCCCC-CCCC
Q 046091 123 EPLWETVTNHGLKAATYFWPGSEVKKGSWNCPKGFCMNYNGSVPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPD-HQGH 201 (423)
Q Consensus 123 ~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d-~~~h 201 (423)
+|+.+.|.++|..+..+---..-+. ...+.... ...+..+..+..++.++. .+.-.|+|.++.+.| ..||
T Consensus 227 ~tvl~~L~e~g~~vi~IGKI~DI~~------~~Git~~~-~~~~n~~~~d~tl~~~~~--~~~~~~vFtNlVdfD~~yGH 297 (397)
T COG1015 227 PTVLDKLKEAGRPVIAIGKIADIYA------GQGITEKV-KAVSNMDGMDVTLEEMKT--AEFNGLVFTNLVDFDSLYGH 297 (397)
T ss_pred hhHHHHHHHcCCceEEEeeHHhhhc------cccccccc-cCCCcHHHHHHHHHHHhc--CCCCcEEEEeeeeccccccc
Confidence 4677888888887765421110000 00111111 112234556777777653 234479999999999 7899
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 202 KVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 202 ~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
.-. -.-|.++++.+|+.|.+|++.|+ ++-++|||+|||--+
T Consensus 298 RrD--v~gYa~aLe~FD~rL~e~~~~l~-----edDlLiiTADHGnDP 338 (397)
T COG1015 298 RRD--VAGYAAALEEFDRRLPELIENLR-----EDDLLIITADHGNDP 338 (397)
T ss_pred ccc--hHHHHHHHHHHHHHHHHHHHhcC-----CCCEEEEecCCCCCC
Confidence 863 35799999999999999999998 678999999999744
No 34
>PF08665 PglZ: PglZ domain; InterPro: IPR013973 This entry is a member of the Alkaline phosphatase clan.
Probab=98.70 E-value=1.2e-08 Score=87.85 Aligned_cols=56 Identities=23% Similarity=0.306 Sum_probs=38.4
Q ss_pred CcEEEEEECCCCCCCCCCCCCchHHHHHHcCc--ccCCCcccCCCCCCchhHHHHhhcCCcC
Q 046091 33 PVVLLVSSDGFRFGYQFKTSTPNIHRLINNGT--EAETGLIPVFPSLTFPNHYSIVTGLYPA 92 (423)
Q Consensus 33 ~~vv~I~iDgl~~d~~~~~~~P~l~~l~~~G~--~~~~~~~~~~ps~T~p~~~si~TG~~P~ 92 (423)
.+|++|++||||++... ... ..|.+++. .-...+.+..||.|.-+++||+.|..|.
T Consensus 1 ~kv~liv~Dgmrye~~~-eL~---~~L~~~~~~~~~~~~~~a~LPS~T~~sr~ALl~g~~~~ 58 (181)
T PF08665_consen 1 KKVALIVSDGMRYEQAR-ELA---ESLSREGWFEVELDPALAWLPSITEVSRAALLPGKLPR 58 (181)
T ss_pred CeEEEEEEcCCCHHHHH-HHH---HHHhhccCcceeeeeeeEeccchhHHHHHHHcCCCChh
Confidence 36999999999997431 111 22332332 1113566788999999999999999885
No 35
>PRK10518 alkaline phosphatase; Provisional
Probab=98.60 E-value=1.9e-06 Score=83.78 Aligned_cols=78 Identities=13% Similarity=0.204 Sum_probs=66.9
Q ss_pred CChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECC
Q 046091 165 VPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGD 244 (423)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsD 244 (423)
..+.+.++.+++.|+ ++++.||++|.=..+|+.+|..- ....+.....+|+.|+..++..++. +||+||||+|
T Consensus 324 PsLaeMT~kAI~~Ls--kn~~GFFLmVEGg~ID~a~H~nd--a~~~i~E~~~fD~AV~~A~~~~~~~---~dTLVIVTAD 396 (476)
T PRK10518 324 PTLAQMTDKAIDLLK--KNEKGFFLQVEGASIDKQDHAAN--PCGQIGETVDLDEAVQKALEFARKD---GNTLVIVTAD 396 (476)
T ss_pred CCHHHHHHHHHHHhc--cCCCceEEEeeccccchhhccCC--HHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEEEcc
Confidence 356677888888886 46789999999999999999873 4567888999999999999999976 5999999999
Q ss_pred CCCCC
Q 046091 245 HGMVG 249 (423)
Q Consensus 245 HG~~~ 249 (423)
|++..
T Consensus 397 H~h~~ 401 (476)
T PRK10518 397 HAHSS 401 (476)
T ss_pred CCCcc
Confidence 99975
No 36
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=98.52 E-value=1e-06 Score=83.64 Aligned_cols=73 Identities=23% Similarity=0.466 Sum_probs=60.4
Q ss_pred HHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCC
Q 046091 168 EDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGM 247 (423)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~ 247 (423)
.+..+++++.+ ++.+.|++.+.|..+|-+||.- .-+...++++.+|++||++++.+++. +..++||+|||-
T Consensus 374 ~evtd~~~~~i---~~g~~D~iV~N~ANpDMVGHTG--~~eatiKAvEavD~~lg~ivd~~~~~----gg~~~iTaDHGN 444 (509)
T COG0696 374 KEVTDALVEAI---EKGKYDLIVLNYANPDMVGHTG--NFEATIKAVEAVDECLGRIVDAVKKN----GGTLLITADHGN 444 (509)
T ss_pred HHHHHHHHHHH---hCCCCCEEEEecCCCccCcccc--cHHHHHHHHHHHHHHHHHHHHHHHhc----CCeEEEeecCcc
Confidence 34566777666 4677899999999999999973 23567889999999999999999986 478999999997
Q ss_pred CC
Q 046091 248 VG 249 (423)
Q Consensus 248 ~~ 249 (423)
+.
T Consensus 445 aE 446 (509)
T COG0696 445 AE 446 (509)
T ss_pred hh
Confidence 64
No 37
>TIGR02687 conserved hypothetical protein TIGR02687. Members of this family are uncharacterized proteins sporadically distributed in bacteria and archaea, about 880 amino acids in length. This protein is repeatedly found upstream of another uncharacterized protein of about 470 amino acids in length, modeled by TIGR02688.
Probab=98.34 E-value=1.3e-06 Score=91.53 Aligned_cols=60 Identities=18% Similarity=0.459 Sum_probs=51.6
Q ss_pred CCcEEEEcCCCCCCCCCcCCCCCH---HHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCCC
Q 046091 185 IPSFMTLYFEDPDHQGHKVGPDDP---EITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVGT 250 (423)
Q Consensus 185 ~p~~~~~~~~~~d~~~h~~g~~s~---~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~~ 250 (423)
.+.++++|+..+|..||..|+.+. +..+++..+++.|++|++.+. .+.|+||||||+...
T Consensus 569 ~~~~vyiY~~~ID~~g~~~~~e~~~f~a~~~~l~el~~~v~~l~~~l~------~~~i~iTADHGfi~~ 631 (844)
T TIGR02687 569 DKRVIYIYHNKIDATGDKQSSEENVFEAVEETIVELKKLVKYLINRLN------GTNIIVTADHGFLYQ 631 (844)
T ss_pred CCcEEEEecCccchhhcccCCcchHHHHHHHHHHHHHHHHHHHHHhcC------CcEEEEECCCccccc
Confidence 467999999999999999998875 677889999999999888764 358999999999854
No 38
>smart00098 alkPPc Alkaline phosphatase homologues.
Probab=98.34 E-value=6.2e-06 Score=79.44 Aligned_cols=79 Identities=16% Similarity=0.261 Sum_probs=66.4
Q ss_pred CChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECC
Q 046091 165 VPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGD 244 (423)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsD 244 (423)
..+.+.++.+++.|+ ++++.+|++|.=..+|+.+|..- .......+..+|+.|+..++.+++. ++|+||||+|
T Consensus 234 PsL~eMt~~Al~~L~--~~~~GFfLmVEgg~ID~a~H~nd--~~~~i~E~~~fd~AV~~a~~~~~~~---~dTLiiVTAD 306 (419)
T smart00098 234 PSLAEMTEVAIRLLS--KNERGFFLMVEGGRIDHAHHEND--ACGALHETVDFDQAIQAALEFAKKE---DETLVIVTAD 306 (419)
T ss_pred CCHHHHHHHHHHHhh--cCCCceEEEEecccCChhhccCC--HHHHHHHHHHHHHHHHHHHHHhhCC---CCcEEEEEec
Confidence 345667788888885 46789999999999999999873 4567888999999999999999873 7999999999
Q ss_pred CCCCCC
Q 046091 245 HGMVGT 250 (423)
Q Consensus 245 HG~~~~ 250 (423)
|+....
T Consensus 307 H~~g~~ 312 (419)
T smart00098 307 HSHVGT 312 (419)
T ss_pred CCCccc
Confidence 988743
No 39
>COG2194 Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]
Probab=98.31 E-value=1.1e-05 Score=80.56 Aligned_cols=190 Identities=15% Similarity=0.204 Sum_probs=114.1
Q ss_pred CCCcEEEEEECCCCCCCC-----CCCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCC
Q 046091 31 EKPVVLLVSSDGFRFGYQ-----FKTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPY 105 (423)
Q Consensus 31 ~~~~vv~I~iDgl~~d~~-----~~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~ 105 (423)
++..+|+|+=+..|++.. .+..||.|+++.++=+.|.+. .|+ .+.|..+..++++=. |..+. +
T Consensus 230 ~~~~~VLVIGESaR~~n~~L~GY~R~TtP~L~~~~~~~~~f~~~-~Sc-gt~Ta~Slpcmfs~~-~r~~~-------~-- 297 (555)
T COG2194 230 KPRTVVLVIGESARRDNMSLYGYPRETTPFLAKLRGPLTVFFNA-YSC-GTATALSLPCMFSRD-PRENY-------S-- 297 (555)
T ss_pred CCcEEEEEEechhhHhhccccCCCCCCChhHHhccCCceeeccc-ccc-ccceeeeehhhcccC-chhcc-------c--
Confidence 566788888899998843 357899888876644666654 444 578888888877642 22111 0
Q ss_pred CCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcCCCCCCCCC---------ccccc-C-CCCCChHH-HHHH
Q 046091 106 TGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVKKGSWNCPK---------GFCMN-Y-NGSVPFED-RVDT 173 (423)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~-~~~~~~~~-~~~~ 173 (423)
+.++...+.+.+.++++|++|. |-... ....+.+.. .+... + ++....++ ....
T Consensus 298 ----------~~~~~~~~Nl~dilkrAG~~t~---W~~nq-~~~k~~~~~~~~~~~~d~~~~~~~~~~~~~~~De~LL~~ 363 (555)
T COG2194 298 ----------EQKALHQDNLLDLLKRAGYKTF---WISNQ-TGCKGVTDRIPIANRADENYFLKGYCNGGNCYDEALLPD 363 (555)
T ss_pred ----------cccccccccHHHHHHHcCCeEE---eeccC-cccccchhhchhhhhhhhhccccccccCcccchHHHhHh
Confidence 0111224678899999999974 33332 111111110 01111 1 11112222 2233
Q ss_pred HHhhccCCCCCCCcEEEEcCCCCCCCC-C-------cCCCC---------C-----HHHHHHHHHHHHHHHHHHHHHHHc
Q 046091 174 VLSYFDLPSSEIPSFMTLYFEDPDHQG-H-------KVGPD---------D-----PEITEAVARIDRMIGRLIDGIEKR 231 (423)
Q Consensus 174 ~~~~~~~~~~~~p~~~~~~~~~~d~~~-h-------~~g~~---------s-----~~~~~~~~~~D~~ig~ll~~l~~~ 231 (423)
..+.++. +.....|+++|..+.|-.. . .+-|. + ..|.+++.+.|..|.++++.|+++
T Consensus 364 ~~~~l~~-~~~~~~~IVLH~~GSHp~Y~~Ryp~~~~kF~p~c~~~~~~~c~~~~lvN~YDNtilYtD~~L~~vi~~Lk~~ 442 (555)
T COG2194 364 LDQVLAQ-ELSQKKLIVLHLMGSHPNYYDRYPKEFAKFTPTCDTNDISSCSQEQLVNCYDNTILYTDYFLSKLIDQLKDK 442 (555)
T ss_pred HHHHhhc-cCCCCeEEEEEccCCCccHhhhCCHHHhccCCCCCccccccCcHHHHHHhhhchhhhhHHHHHHHHHHHHhC
Confidence 3344431 1233469999999998211 1 11221 1 137789999999999999999998
Q ss_pred CCCCCeEEEEECCCCCCC
Q 046091 232 GVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 232 ~~~~~t~viitsDHG~~~ 249 (423)
+ +++.+|.+||||.+-
T Consensus 443 ~--~~~~liY~SDHGEsl 458 (555)
T COG2194 443 K--DNTSLIYFSDHGESL 458 (555)
T ss_pred C--CCeEEEEEcCccHhh
Confidence 7 599999999999863
No 40
>KOG4513 consensus Phosphoglycerate mutase [Carbohydrate transport and metabolism]
Probab=98.21 E-value=2.3e-05 Score=71.80 Aligned_cols=70 Identities=24% Similarity=0.319 Sum_probs=56.3
Q ss_pred HHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 170 RVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 170 ~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
..+.+.+.+ +..+-+++.+.+..+|-.||.- .-+....+.+..|.+||+|++.+++. ..+++||+|||-+
T Consensus 392 va~ka~~~i---e~G~~p~v~vNlappDMVGHTG--~~EAtv~AcEatD~aig~Iy~A~~~~----~y~lvvTADHGNA 461 (531)
T KOG4513|consen 392 VAEKARDAI---ESGKFPQVRVNLAPPDMVGHTG--DIEATVVACEATDEAIGKIYDAIEQV----GYILVVTADHGNA 461 (531)
T ss_pred HHHHHHHHH---HcCCCCeEEEcCCCccccCccc--chhhhhhHHHHHHHHHHHHHHHHHhc----CcEEEEEcCCCCH
Confidence 344555555 4566678899999999999974 23566789999999999999999986 4889999999975
No 41
>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional
Probab=97.98 E-value=2.9e-05 Score=75.09 Aligned_cols=71 Identities=24% Similarity=0.496 Sum_probs=58.8
Q ss_pred ChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCC
Q 046091 166 PFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDH 245 (423)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDH 245 (423)
.+....+.+++.++ +.||+++++..+|..||.- +-+++.++++.+|++|+++++.++. +++++||||||
T Consensus 279 ~~~~k~~~~~~~l~-----~~Dfv~vh~~~~D~~GH~g--d~~~k~~aiE~iD~~l~~il~~l~~----~~~~liITaDH 347 (412)
T PRK04024 279 NYMAKAKAAVELLK-----EYDFVLLNIKGTDEAGHDG--DFEGKVEVIEKIDKMLGYILDNLDL----DEVYIAVTGDH 347 (412)
T ss_pred CHHHHHHHHHHHhc-----cCCEEEEeccCcchhhcCC--CHHHHHHHHHHHHHHHHHHHHHhhc----CCCEEEEecCC
Confidence 34455666666663 5899999999999999976 3468899999999999999999863 46799999999
Q ss_pred CC
Q 046091 246 GM 247 (423)
Q Consensus 246 G~ 247 (423)
|-
T Consensus 348 gt 349 (412)
T PRK04024 348 ST 349 (412)
T ss_pred CC
Confidence 97
No 42
>PF00245 Alk_phosphatase: Alkaline phosphatase; InterPro: IPR001952 This entry represents alkaline phosphatases (3.1.3.1 from EC) (ALP), which act as non-specific phosphomonoesterases to hydrolyse phosphate esters, optimally at high pH. The reaction mechanism involves the attack of a serine alkoxide on a phosphorus of the substrate to form a transient covalent enzyme-phosphate complex, followed by the hydrolysis of the serine phosphate. Alkaline phosphatases are found in all kingdoms of life, with the exception of some plants. Alkaline phosphatases are metalloenzymes that exist as a dimer, each monomer binding metal ions. The metal ions they carry can differ, although zinc and magnesium are the most common. For example, Escherichia coli alkaline phosphatase (encoded by phoA) requires the presence of two zinc ions bound at the M1 and M2 metal sites, and one magnesium ion bound at the M3 site []. However, alkaline phosphatases from Thermotoga maritima and Bacillus subtilis require cobalt for maximal activity []. In mammals, there are four alkaline phosphatase isozymes: placental, placental-like (germ cell), intestinal and tissue-nonspecific (liver/bone/kidney). All four isozymes are anchored to the outer surface of the plasma membrane by a covalently attached glycosylphosphatidylinositol (GPI) anchor []. Human alkaline phosphatases have four metal binding sites: two for zinc, one for magnesium, and one for calcium ion. Placental alkaline phosphatase (ALPP or PLAP) is highly polymorphic, with at least three common alleles []. Its activity is down-regulated by a number of effectors such as l-phenylalanine, 5'-AMP, and by p-nitrophenyl-phosphonate (PNPPate) []. The placental-like isozyme (ALPPL or PLAP-like) is elevated in germ cell tumours. The intestinal isozyme (ALPI or IAP) has the ability to detoxify lipopolysaccharide and prevent bacterial invasion across the gut mucosal barrier []. The tissue-nonspecific isozyme (ALPL) is, and may play a role in skeletal mineralisation. Defects in ALPL are a cause of hypophosphatasia, including infantile-type (OMIM:241500), childhood-type (OMIM:241510) and adult-type (OMIM:146300). Hhypophosphatasia is an inherited metabolic bone disease characterised by defective skeletal mineralisation []. This entry also contains the related enzyme streptomycin-6-phosphate phosphatase (3.1.3.39 from EC) (encoded by strK) from Streptomyces species. This enzyme is involved in the synthesis of the antibiotic streptomycin, specifically cleaving both streptomycin-6-phosphate and, more slowly, streptomycin-3-phosphate [].; GO: 0016791 phosphatase activity, 0008152 metabolic process; PDB: 1AJD_B 1ALH_B 2ANH_B 3BDF_A 1ELZ_B 1ELX_B 1B8J_B 2GA3_A 1ANJ_B 1Y6V_B ....
Probab=97.62 E-value=5.6e-05 Score=73.47 Aligned_cols=76 Identities=18% Similarity=0.237 Sum_probs=63.8
Q ss_pred ChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCC
Q 046091 166 PFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDH 245 (423)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDH 245 (423)
.+.+.++.+++.|+ ++++.+|++|--..+|+.+|..- -......+..+|+.|+..++.+++. ++|+||+|+||
T Consensus 238 sL~eMt~~Al~~L~--~~~~GFfLmVEg~~ID~a~H~nd--~~~~i~E~~~fD~AV~~a~~~~~~~---~~TLiIVTADH 310 (421)
T PF00245_consen 238 SLAEMTEKALEVLS--KNPKGFFLMVEGGRIDWAGHAND--AARAIEETLEFDDAVKVALDFAEKD---DDTLIIVTADH 310 (421)
T ss_dssp HHHHHHHHHHHHHT--TSTT-EEEEEEETHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHHHC---SSEEEEEEESS
T ss_pred CHHHHHHHHHHHHh--hCCCCcEEEecccchhhhhhhch--HHHHHHHHHHHHHHHHHHHHHhccC---CCeEEEEEecc
Confidence 34567788888887 56689999999999999999873 3567888999999999999999855 89999999999
Q ss_pred CCC
Q 046091 246 GMV 248 (423)
Q Consensus 246 G~~ 248 (423)
+..
T Consensus 311 etg 313 (421)
T PF00245_consen 311 ETG 313 (421)
T ss_dssp EES
T ss_pred cCc
Confidence 986
No 43
>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form. This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).
Probab=97.61 E-value=0.00019 Score=69.10 Aligned_cols=69 Identities=19% Similarity=0.349 Sum_probs=56.0
Q ss_pred HHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 169 DRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
...+.+++.++ +-||+++++..+|.+||.- +.++..++++.+|+.+.++++.++. ++.+||||||||-.
T Consensus 276 ~k~~~~~~~l~-----~yDfv~v~~~~~D~aGH~g--d~~~k~~aIE~iD~~l~~~l~~l~~----~~~~liiTaDHgtp 344 (396)
T TIGR00306 276 GKVRALILALE-----EYDFVLVHTKGPDEAGHDG--DPELKVRAIEKIDSKIVGPLLALDL----DETRLILTADHSTP 344 (396)
T ss_pred HHHHHHHHHhh-----cCCEEEEEecCCChhhhcC--CHHHHHHHHHHHHHHHHHHHHHhhh----CCCEEEEeCCCCCC
Confidence 34445555542 4789999999999999975 5678999999999999999988864 56799999999974
No 44
>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional
Probab=97.31 E-value=0.00084 Score=64.83 Aligned_cols=71 Identities=27% Similarity=0.508 Sum_probs=55.4
Q ss_pred hHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHH-HHHHHHHHHHcCCCCCeEEEEECCC
Q 046091 167 FEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRM-IGRLIDGIEKRGVFEDVTIVMVGDH 245 (423)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~-ig~ll~~l~~~~~~~~t~viitsDH 245 (423)
+...++.+++.++ +-+|+++|+..+|.++|.- +-.+..++++.+|+. ++.|++.|++. ++.+++|||||
T Consensus 270 ~~~k~~~a~~~l~-----~~DfV~vh~~~~D~aGH~g--d~~~kv~aiE~lD~~~~~~ll~al~~~---~~~~l~it~DH 339 (395)
T PRK04200 270 YEGKAEAALEALK-----THDFVFVHVEAPDEAGHEG--DLEAKIKAIEDIDERVVGPILEALKKY---EDYRILVLPDH 339 (395)
T ss_pred hHHHHHHHHHHhc-----cCCEEEEEecCcchhhccC--CHHHHHHHHHHHHHHhHHHHHHHHHhc---CCCEEEEeccC
Confidence 3444556666553 4789999999999999964 346778999999998 55899999652 46799999999
Q ss_pred CC
Q 046091 246 GM 247 (423)
Q Consensus 246 G~ 247 (423)
|.
T Consensus 340 ~t 341 (395)
T PRK04200 340 PT 341 (395)
T ss_pred Cc
Confidence 94
No 45
>TIGR02535 hyp_Hser_kinase proposed homoserine kinase. The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.
Probab=97.26 E-value=0.001 Score=64.31 Aligned_cols=71 Identities=28% Similarity=0.485 Sum_probs=54.9
Q ss_pred HHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHH-HHHHHHHHHHcCCCCCeEEEEECCCC
Q 046091 168 EDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRM-IGRLIDGIEKRGVFEDVTIVMVGDHG 246 (423)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~-ig~ll~~l~~~~~~~~t~viitsDHG 246 (423)
...++.+++.++ +-||+++++..+|..+|.- +-.+..++++.+|+. ++.+++.+++.+ ++.+++||||||
T Consensus 272 ~~k~~~~~~~l~-----~~Dfv~vh~~~~D~aGH~g--d~~~kv~aIE~lD~~~~~~ll~al~~~~--~~~~~~vt~DH~ 342 (396)
T TIGR02535 272 EGKVRAALEALE-----TYDFVVVHVEAPDEAGHEG--DLEAKIKAIELIDSRIVGPLLEALSDRD--EPFRILVLPDHP 342 (396)
T ss_pred HHHHHHHHHHHh-----hCCEEEEEeCCCChhhccC--CHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEEeeeCc
Confidence 344555555553 3688999999999999964 346778999999997 558999997544 466999999999
Q ss_pred C
Q 046091 247 M 247 (423)
Q Consensus 247 ~ 247 (423)
.
T Consensus 343 t 343 (396)
T TIGR02535 343 T 343 (396)
T ss_pred c
Confidence 5
No 46
>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type. A member of this family, AcpA from Burkholderia mallei, has been charactized as a surface-bound glycoprotein with acid phosphatase activity, as can be shown with the colorigenic substrate 5-bromo-4-chloro-3-indolyl phosphate. This family shares regions of sequence similarity with phosphocholine-preferring phospholipase C enzymes (TIGR03396) from many of the same species.
Probab=97.13 E-value=0.0074 Score=59.12 Aligned_cols=58 Identities=19% Similarity=0.248 Sum_probs=44.3
Q ss_pred CCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECC-CCC
Q 046091 182 SSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGD-HGM 247 (423)
Q Consensus 182 ~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsD-HG~ 247 (423)
...-|.+.|+.-.... .+|.- . ..+...|..|++|++.|++.+.++||+||||+| ||-
T Consensus 341 ~g~LPqvSfI~P~~~~-d~Hp~--~-----s~v~~gD~~vg~vl~aL~~~p~w~NTlII~T~DENGG 399 (483)
T TIGR03397 341 AGKLPQVSFYKPQGNL-NEHAG--Y-----ADVAAGDRHIADVIAHLQKSPQWKNMVVIVTYDENGG 399 (483)
T ss_pred cCCCCcEEEEeCCCCC-CCCcC--C-----CCHHHHHHHHHHHHHHHHhCccccCcEEEEEEECCCC
Confidence 3456888887543322 33431 1 148899999999999999999999999999999 883
No 47
>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional
Probab=96.91 E-value=0.0026 Score=60.76 Aligned_cols=68 Identities=19% Similarity=0.374 Sum_probs=51.4
Q ss_pred hHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCC
Q 046091 167 FEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHG 246 (423)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG 246 (423)
+...++.+++.+ ++-||+++|+..+|..||.- +-.+-.++++.+|+.|..|+ .+ ++++|+|||||+
T Consensus 266 ~~~k~~~a~~~l-----~~~DfV~vhvk~~DeaGH~g--d~~~Kv~~IE~iD~~l~~ll-~l------~~~~ivVT~DH~ 331 (395)
T PRK04135 266 LEDEIKTLKENW-----NDYDFFFLHVKKTDSYGEDG--NFEEKVKVIEEVDALLPEIL-AL------KPDVLVITGDHS 331 (395)
T ss_pred HHHHHHHHHHHH-----hcCCEEEEEeccCchhhccC--CHHHHHHHHHHHHHHHHHHh-cC------CCcEEEEeCCCC
Confidence 334444555444 24789999999999999964 34566889999999999888 54 245899999999
Q ss_pred CC
Q 046091 247 MV 248 (423)
Q Consensus 247 ~~ 248 (423)
.-
T Consensus 332 TP 333 (395)
T PRK04135 332 TP 333 (395)
T ss_pred Cc
Confidence 64
No 48
>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]
Probab=96.74 E-value=0.0042 Score=57.80 Aligned_cols=69 Identities=20% Similarity=0.438 Sum_probs=53.6
Q ss_pred hHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCC
Q 046091 167 FEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHG 246 (423)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG 246 (423)
+...++.+++.++ .-||+++|+-.+|.+||.-. -+.-..+++.+|+.++.+++ ++ .++++|+||+||.
T Consensus 283 ~~~k~k~a~eal~-----~yDfv~vhik~tDeagHdG~--~e~Kv~~IE~iD~~i~pll~-~~----~~~~~i~vt~DHs 350 (408)
T COG3635 283 YRGKAKAAIEALK-----EYDFVFVHIKATDEAGHDGD--FEGKVRVIEDIDKAIGPLLD-LD----LDEDVIAVTGDHS 350 (408)
T ss_pred HHHHHHHHHHHHh-----hCCEEEEEeccCccccCCCC--HHHhHHHHHHHHHHhhhhhc-cc----cCCcEEEEeCCCC
Confidence 3444555665553 57899999999999999742 34567899999999999998 43 2689999999997
Q ss_pred C
Q 046091 247 M 247 (423)
Q Consensus 247 ~ 247 (423)
.
T Consensus 351 T 351 (408)
T COG3635 351 T 351 (408)
T ss_pred C
Confidence 4
No 49
>PF04185 Phosphoesterase: Phosphoesterase family; InterPro: IPR007312 This entry includes both bacterial phospholipase C enzymes (3.1.4.3 from EC) and eukaryotic acid phosphatases 3.1.3.2 from EC.; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 2D1G_B.
Probab=96.63 E-value=0.0088 Score=57.86 Aligned_cols=175 Identities=14% Similarity=0.203 Sum_probs=86.8
Q ss_pred CCCCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCCCCeeecCCCCC-cccCCcchh
Q 046091 48 QFKTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYTGDTFTMASHEP-KWWLGEPLW 126 (423)
Q Consensus 48 ~~~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~~~~~~~~~~~-~~~~~~~i~ 126 (423)
..+..+|++.+|+++.+.+++.++++ +.-|.|++..+++|..- |...+. .+... ++ ..+..++||
T Consensus 118 y~~~~~P~~~~LA~~f~l~Dnyf~s~-~~pS~PNr~~l~sG~~~---~~~~~~--~~~~~--------~~~~~~~~~ti~ 183 (376)
T PF04185_consen 118 YTPADLPFLWALADQFTLCDNYFCSV-PGPSQPNRLYLISGTSD---GVGNNG--NPFID--------NPSPPFSWPTIF 183 (376)
T ss_dssp --TTTSHHHHHHHHHSEEESSEE-SS-SS-HHHHHHHHHHS------TT-STS---TTS---------EEES------HH
T ss_pred eCCCCChHHHHHHhheEEecccccCC-CCCCCCCceEEEeeccC---ccccCC--CCcee--------cCCCCcccccHH
Confidence 34578999999999999999877665 67899999999999862 211110 00000 00 112246899
Q ss_pred hhHhhcCCcEEEee--cCCCCcCCCCCCCCCc-----------cc---ccCCCCCChHHHHHHHHhhccCCCCCCCcEEE
Q 046091 127 ETVTNHGLKAATYF--WPGSEVKKGSWNCPKG-----------FC---MNYNGSVPFEDRVDTVLSYFDLPSSEIPSFMT 190 (423)
Q Consensus 127 ~~~~~~G~~~~~~~--~~~~~~~~~~~~~~~~-----------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 190 (423)
+.|.++|+.-..|. ++..... ........ +. ........-...+++..+.++ ...-|.|.+
T Consensus 184 d~L~~aGisW~~Y~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~d~~--~g~LP~~sf 260 (376)
T PF04185_consen 184 DRLSAAGISWKWYQEGYPNPGDN-GLAGFDPYFDYFYQPFNPPSFGSYSPNPDRANHIVPLSQFYADLA--NGTLPQVSF 260 (376)
T ss_dssp HHHHHHT--EEEEETT-S-SEEE-TTEEE---EEE-TTS-E--S-GGGTTSBSTTTTEEECHHHHHHHH--TT---SEEE
T ss_pred HHHHHcCCceEeCeecCCccCcc-cccccccchhhhhcccccccccccccccccccccchHHHHHHHHH--cCCCCceEE
Confidence 99999998866653 1111100 00000000 00 000000000001233333333 345688888
Q ss_pred EcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCC
Q 046091 191 LYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGM 247 (423)
Q Consensus 191 ~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~ 247 (423)
+.-.. -..+|.. . ..+..-|..|+++++.|.....+++|+||||=|-+.
T Consensus 261 I~p~~-~~d~Hp~--~-----~~~~~gd~~l~~vv~ai~~sp~W~~T~iiIt~DE~g 309 (376)
T PF04185_consen 261 IEPNM-CNDMHPP--Y-----SVIADGDAFLARVVEAIRNSPYWKNTAIIITYDENG 309 (376)
T ss_dssp EE--G-GGS--TT--T-------HHHHHHHHHHHHHHHHCSTTGGGEEEEEEES--T
T ss_pred EEecC-cCCCCCC--C-----CchhHHHHHHHHHHHHHhcCcCcCCeEEEEEEecCC
Confidence 76522 2223321 1 135788999999999999998999999999988654
No 50
>KOG4126 consensus Alkaline phosphatase [Inorganic ion transport and metabolism]
Probab=96.39 E-value=0.011 Score=57.20 Aligned_cols=76 Identities=18% Similarity=0.255 Sum_probs=59.4
Q ss_pred ChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCC
Q 046091 166 PFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDH 245 (423)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDH 245 (423)
.+.+.++.+++.+. +.++-+|++|.=.-+|...|..- ....++...+.|++|+.-++..+. ++|++|+||||
T Consensus 326 sL~eMte~Al~vL~--~~~~GffLfVEGgrID~ghH~~~--a~~aL~Et~ef~~Aiq~a~~~t~~----~dTLivvTaDH 397 (529)
T KOG4126|consen 326 SLSEMTEKALEVLS--KNSKGFFLFVEGGRIDHGHHETD--ARQALDETLEFDKAIQRALELTSE----EDTLIVVTADH 397 (529)
T ss_pred CHHHHHHHHHHHHh--hCCCceEEEEecccccccccccH--HHHHHHHHHHHHHHHHHHHHhcCc----cCCEEEEeccc
Confidence 45667778887776 45677999999999999888753 235567778888888888777664 79999999999
Q ss_pred CCCC
Q 046091 246 GMVG 249 (423)
Q Consensus 246 G~~~ 249 (423)
.++-
T Consensus 398 sh~~ 401 (529)
T KOG4126|consen 398 SHTF 401 (529)
T ss_pred ccce
Confidence 9864
No 51
>PF07394 DUF1501: Protein of unknown function (DUF1501); InterPro: IPR010869 This family contains a number of hypothetical bacterial proteins of unknown function approximately 400 residues long.
Probab=90.91 E-value=0.95 Score=44.15 Aligned_cols=61 Identities=13% Similarity=0.327 Sum_probs=48.8
Q ss_pred CcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCCC
Q 046091 186 PSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVGT 250 (423)
Q Consensus 186 p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~~ 250 (423)
..++++.+..-|.-.. ....+...+..+|+.|..|++.|+++|++|+|+||++||=|.+..
T Consensus 246 ~~v~~V~~gGwDTH~~----~~~~~~~ll~~L~~alaaf~~dL~~~g~~d~t~vv~~SEFGRt~~ 306 (392)
T PF07394_consen 246 VRVVFVSLGGWDTHSN----QGNRHARLLPELDQALAAFIQDLKERGLLDDTLVVTMSEFGRTPR 306 (392)
T ss_pred CEEEEECCCCccCccc----cHhHHHHHHHHHHHHHHHHHHHHHhcCCcCceEEEEeeecCCCcc
Confidence 4567777766443332 234577788999999999999999999999999999999998764
No 52
>TIGR03396 PC_PLC phospholipase C, phosphocholine-specific, Pseudomonas-type. Members of this protein family are bacterial, phosphatidylcholine-hydrolyzing phospholipase C enzymes, with a characteristic domain architecture as found in hemolytyic (PlcH) and nonhemolytic (PlcN) secreted enzymes of Pseudomonas aeruginosa. PlcH hydrolyzes phosphatidylcholine to diacylglycerol and phosphocholine, but unlike PlcN can also hydrolyze sphingomyelin to ceramide ((N-acylsphingosine)) and phosphocholine. Members of this family share the twin-arginine signal sequence for Sec-independent transport across the plasma membrane. PlcH is secreted as a heterodimer with a small chaperone, PlcR, encoded immediately downstream.
Probab=90.75 E-value=2 Score=44.66 Aligned_cols=175 Identities=14% Similarity=0.117 Sum_probs=99.3
Q ss_pred CCCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCC---Cc-ccccccCCCCCCeeecCCCCCcccCCcc
Q 046091 49 FKTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYH---GI-INNHFVDPYTGDTFTMASHEPKWWLGEP 124 (423)
Q Consensus 49 ~~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~h---Gi-~~n~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (423)
.+...|++..|+++=+.+++.++++ ++-|.|++.-++||.....- |. +.|..... ..... ..-+.-.|
T Consensus 145 ~r~dlPf~~aLAdaFTvcD~yf~S~-~g~T~PNR~~~~sGt~~~~~~~~~~~~~n~~~~~------~~~~~-~~~~~w~T 216 (690)
T TIGR03396 145 KREDIPFQYALADAFTICDAYHCSV-QGGTNPNRLYLWTGTNGPLGGAGGPAVTNDDDWP------GIGPG-EGGYTWTT 216 (690)
T ss_pred CccccHHHHHHHHHhhhhhhhcccC-CCCCCcCceeeEecccCCcccCCcceecCCcccc------ccccc-cCCCCcCc
Confidence 3467899999999988888766665 78999999999999875421 11 11210000 00000 00123368
Q ss_pred hhhhHhhcCCcEEEeecCCCCcCCCCCCCCCcccccCCC---------------CCChHHHHHHHHhhccCCCCCCCcEE
Q 046091 125 LWETVTNHGLKAATYFWPGSEVKKGSWNCPKGFCMNYNG---------------SVPFEDRVDTVLSYFDLPSSEIPSFM 189 (423)
Q Consensus 125 i~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~p~~~ 189 (423)
+++.|.++|+.=..|.-....+... +-.++..|.. .......++++.+-++ ...-|.+.
T Consensus 217 i~e~L~~aGVSWkvYq~~~~n~~dn----pl~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~Dv~--~g~LP~VS 290 (690)
T TIGR03396 217 YPERLEQAGVSWKVYQDMNDNFTDN----PLAGFKQFRNASSDNPGSPLYLGARGMSTRDLLDQLRADVQ--AGTLPQVS 290 (690)
T ss_pred HHHHHHhCCCcEEEEecCCCccccc----hhHHHHHHhhhhccCCCchhhhcccCcccccHHHHHHHHHH--cCCCCeEE
Confidence 9999999998766553211110000 0001111100 0001111233333332 34568888
Q ss_pred EEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCeEEEEECCCC
Q 046091 190 TLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRG-VFEDVTIVMVGDHG 246 (423)
Q Consensus 190 ~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~-~~~~t~viitsDHG 246 (423)
+|.-... ...|-- .....=+..|.++++.|.... .+++|+|||+=|-.
T Consensus 291 ~I~p~~~-~seHP~--------~~~~~G~~~i~~vl~aL~~nP~vW~~TvliItyDE~ 339 (690)
T TIGR03396 291 WIVAPAA-YSEHPG--------SSPAYGAWYVSRVLDALTANPEVWSKTVLLLNYDEN 339 (690)
T ss_pred EEecCCC-CCCCCC--------CChHHHHHHHHHHHHHHHhChhhhhceEEEEEEeCC
Confidence 8864432 344432 233455678999999999887 58999999997754
No 53
>COG3635 Predicted phosphoglycerate mutase, AP superfamily [Carbohydrate transport and metabolism]
Probab=90.11 E-value=0.31 Score=45.75 Aligned_cols=37 Identities=30% Similarity=0.318 Sum_probs=28.3
Q ss_pred CCCcEEEEEECCCCCCC---------CCCCCCchHHHHHHcCcccC
Q 046091 31 EKPVVLLVSSDGFRFGY---------QFKTSTPNIHRLINNGTEAE 67 (423)
Q Consensus 31 ~~~~vv~I~iDgl~~d~---------~~~~~~P~l~~l~~~G~~~~ 67 (423)
.+.++|+|++||+.-.- ++...+||+++|+++|..-.
T Consensus 2 ~~~killiv~DGlgDrP~~~l~gkTpLq~A~tPNmD~LA~~g~~Gl 47 (408)
T COG3635 2 MKMKILLIVLDGLGDRPVEELDGKTPLQAAKTPNMDRLAKEGICGL 47 (408)
T ss_pred CcceEEEEEecCCCCCcccccCCCCchhhcCCCCHHHHHhcCCccc
Confidence 35679999999998321 22357999999999998653
No 54
>PF11658 DUF3260: Protein of unknown function (DUF3260); InterPro: IPR017744 This protein was identified by the partial phylogenetic profiling algorithm [] as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions. The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation [].
Probab=87.90 E-value=21 Score=35.41 Aligned_cols=192 Identities=14% Similarity=0.203 Sum_probs=110.8
Q ss_pred cEEEEEECCCCCCCCC---CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCC--cCCCCcccccccCCCCCC
Q 046091 34 VVLLVSSDGFRFGYQF---KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLY--PAYHGIINNHFVDPYTGD 108 (423)
Q Consensus 34 ~vv~I~iDgl~~d~~~---~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~--P~~hGi~~n~~~~~~~~~ 108 (423)
-||+|-|=++.||-++ ....|-++++ -+.|+| +.|. .+.|.|+-.=++.+.. |.++. .|++...+
T Consensus 197 DllvlnICSLsWdDl~a~gl~~hPl~~~F---Di~F~n-FNSA-tSYSGPAaIRLLRASCGQ~sH~~-----Ly~pa~~q 266 (518)
T PF11658_consen 197 DLLVLNICSLSWDDLDAAGLRNHPLWKRF---DIVFDN-FNSA-TSYSGPAAIRLLRASCGQPSHSD-----LYQPAPQQ 266 (518)
T ss_pred cEEEEEecccchhhHHHhCCccCchHHhh---cchhcc-cccc-cccchHHHHHHHHhccCCcchHh-----hcCCCccc
Confidence 6999999999998543 3456776665 356664 3332 5778888877776643 22222 23332211
Q ss_pred eeecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcC--------CCCCCCCC-------cccccCCCCCChHHHHHH
Q 046091 109 TFTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVK--------KGSWNCPK-------GFCMNYNGSVPFEDRVDT 173 (423)
Q Consensus 109 ~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~--------~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 173 (423)
. -+|+-|++.|++.....--+..+. .++...+. .+...+.+ .+..+..+.
T Consensus 267 C--------------~LF~nLa~lGf~~~l~mnHdG~Fd~Fl~~ir~~G~l~~pl~s~~g~~~~~~~FDg-SpI~~D~~v 331 (518)
T PF11658_consen 267 C--------------YLFDNLAKLGFTQQLMMNHDGHFDNFLQEIREDGGLQAPLMSQAGLPVALHSFDG-SPIYDDLAV 331 (518)
T ss_pred c--------------cHHHHHHhcCCchhhccCCCCccccHHHHHHHcCCCCCCCcCCCCCchHhhccCC-CcccchHHH
Confidence 1 256677777777655432211110 01111110 01111222 222233344
Q ss_pred HHhhccC--CCCCCCcEEEEcCCCCCCCCCcCCC---C-CHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCC
Q 046091 174 VLSYFDL--PSSEIPSFMTLYFEDPDHQGHKVGP---D-DPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGM 247 (423)
Q Consensus 174 ~~~~~~~--~~~~~p~~~~~~~~~~d~~~h~~g~---~-s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~ 247 (423)
+.+|++. ..++.+.-++......|+-.+.-|. . ...|..-.+.+=+.+.++++.|++.| .+.+||++=.||-
T Consensus 332 L~rW~~~r~~~~~~~~A~~YNtIsLHDGNr~~~~~~~~s~~sY~~Ra~~Llddl~~F~~~Le~Sg--R~v~vv~VPEHGA 409 (518)
T PF11658_consen 332 LNRWLQQREKSDDGRVATFYNTISLHDGNRLPGSDRLNSLASYKPRAQKLLDDLDRFFDELEKSG--RKVMVVVVPEHGA 409 (518)
T ss_pred HHHHHHHHhhcCCCceEEEEeeeecccCCccCCCCCcccccchHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEecCccc
Confidence 4445442 2456677888888888887776654 2 23465556666667788899999998 8999999999998
Q ss_pred CCCCC
Q 046091 248 VGTCD 252 (423)
Q Consensus 248 ~~~~~ 252 (423)
.-..+
T Consensus 410 AlrGD 414 (518)
T PF11658_consen 410 ALRGD 414 (518)
T ss_pred ccccc
Confidence 75443
No 55
>PRK04135 cofactor-independent phosphoglycerate mutase; Provisional
Probab=84.86 E-value=1.8 Score=41.75 Aligned_cols=55 Identities=18% Similarity=0.216 Sum_probs=36.1
Q ss_pred CCcEEEEEECCCCCCC--------CCCCCCchHHHHHHcCcccC-CCcccCCCCCCchhHHHHh
Q 046091 32 KPVVLLVSSDGFRFGY--------QFKTSTPNIHRLINNGTEAE-TGLIPVFPSLTFPNHYSIV 86 (423)
Q Consensus 32 ~~~vv~I~iDgl~~d~--------~~~~~~P~l~~l~~~G~~~~-~~~~~~~ps~T~p~~~si~ 86 (423)
..++|+|++||+.-.- ++...||||++|+++|.... ..+.+-+|+-|-.++.||+
T Consensus 7 ~~K~v~ii~DGmgD~p~~e~gkTPLe~A~tPnlD~lA~~G~~Gl~~~v~~G~~pGSD~a~lsll 70 (395)
T PRK04135 7 DSKIVLLVLDGLGGLPHPENGKTELEAAKTPNLDALAKESDLGLLIPVLPGITPGSGPGHLGLF 70 (395)
T ss_pred CCcEEEEEecCCCCCCCCCCCCChhhccCCCChHHHHHcCCcccceeeCCCCCCCcHHHhhhhh
Confidence 3469999999998321 12357999999999997653 1122333455666666654
No 56
>TIGR02535 hyp_Hser_kinase proposed homoserine kinase. The proposal that this family encodes a kinase is based on analogy to phosphomutases which are intramolecular phosphotransferases. A mutase active site could evolve to bring together homoserine and a phosphate donor such as phosphoenolpyruvate resulting in a kinase activity.
Probab=84.40 E-value=1.6 Score=42.37 Aligned_cols=51 Identities=24% Similarity=0.281 Sum_probs=34.8
Q ss_pred cEEEEEECCCCCCC---------CCCCCCchHHHHHHcCcccCCCcccC---CCCCCchhHHHHh
Q 046091 34 VVLLVSSDGFRFGY---------QFKTSTPNIHRLINNGTEAETGLIPV---FPSLTFPNHYSIV 86 (423)
Q Consensus 34 ~vv~I~iDgl~~d~---------~~~~~~P~l~~l~~~G~~~~~~~~~~---~ps~T~p~~~si~ 86 (423)
++|+|++||+.-.- ++...||||++|+++|.... +.++ +|+-|-+++.+|+
T Consensus 2 k~v~~i~DG~~D~p~~~l~gkTpLe~A~tP~lD~lA~~g~~Gl--~~~v~~g~~pgSd~a~lsl~ 64 (396)
T TIGR02535 2 KYIILIGDGMADWPLEELGGRTPLQVANTPNMDKLAKRGRCGL--LRTVPEGFPPGSDVANMSLL 64 (396)
T ss_pred CEEEEEecCCCCCcccccCCCChhhccCCCcHHHHHhcCCCcc--eeecCCCCCCCcHHHHHHhh
Confidence 58999999998431 22368999999999998654 3333 3444555566544
No 57
>PRK04200 cofactor-independent phosphoglycerate mutase; Provisional
Probab=83.31 E-value=2 Score=41.73 Aligned_cols=51 Identities=22% Similarity=0.281 Sum_probs=35.1
Q ss_pred cEEEEEECCCCCCC---------CCCCCCchHHHHHHcCcccCCCcccC---CCCCCchhHHHHh
Q 046091 34 VVLLVSSDGFRFGY---------QFKTSTPNIHRLINNGTEAETGLIPV---FPSLTFPNHYSIV 86 (423)
Q Consensus 34 ~vv~I~iDgl~~d~---------~~~~~~P~l~~l~~~G~~~~~~~~~~---~ps~T~p~~~si~ 86 (423)
++|+|++||+.-.- ++...||||++|+++|.... +.++ +|+-|-+++.||+
T Consensus 2 k~v~~i~DG~~D~p~~~l~gkTpLe~A~tP~lD~lA~~g~~Gl--~~~v~~g~~pgSd~a~lsl~ 64 (395)
T PRK04200 2 KYIILIGDGMADEPIEELGGKTPLQAAKTPNMDKMAREGRVGL--AKTVPEGFPPGSDVANMSIL 64 (395)
T ss_pred CEEEEEecCCCCCcccccCCCCccceeCCCchHHHHhcCCccc--ceecCCCCCCCcHHHHHHhh
Confidence 58999999998421 23367999999999998664 3333 3444555666554
No 58
>PRK04024 cofactor-independent phosphoglycerate mutase; Provisional
Probab=83.22 E-value=2.2 Score=41.68 Aligned_cols=54 Identities=22% Similarity=0.244 Sum_probs=36.6
Q ss_pred CcEEEEEECCCCCCC---------CCCCCCchHHHHHHcCcccC-CCcccCCCCCCchhHHHHh
Q 046091 33 PVVLLVSSDGFRFGY---------QFKTSTPNIHRLINNGTEAE-TGLIPVFPSLTFPNHYSIV 86 (423)
Q Consensus 33 ~~vv~I~iDgl~~d~---------~~~~~~P~l~~l~~~G~~~~-~~~~~~~ps~T~p~~~si~ 86 (423)
.++|+|++||+.-.- ++...||||++|+++|..-. ..+.+-+|+-|-+++.||+
T Consensus 3 mk~v~~i~DG~~D~p~~~l~gkTpLe~A~tPnlD~lA~~g~~Gl~~~v~~G~~pgSd~a~lsl~ 66 (412)
T PRK04024 3 MKILLIILDGLGDRPVKELGGKTPLEAANTPNMDKLAKEGICGLMDPISPGVRPGSDTAHLAIL 66 (412)
T ss_pred CcEEEEEecCCCCCcccccCCCChhhccCCCChHHHHHcCCcccceeeCCCCCCCcHHHHhhhh
Confidence 379999999998431 22367999999999997653 1122334556666666655
No 59
>TIGR03368 cellulose_yhjU cellulose synthase operon protein YhjU. This protein was identified by the partial phylogenetic profiling algorithm (PubMed:16930487) as part of the system for cellulose biosynthesis in bacteria, and in fact is found in cellulose biosynthesis gene regions. The protein was designated YhjU in Salmonella enteritidis, where disruption of its gene disrupts cellulose biosynthesis and biofilm formation (PubMed:11929533).
Probab=81.59 E-value=38 Score=33.51 Aligned_cols=193 Identities=15% Similarity=0.200 Sum_probs=106.3
Q ss_pred cEEEEEECCCCCCCCC---CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCc-CCCCcccccccCCCCCCe
Q 046091 34 VVLLVSSDGFRFGYQF---KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYP-AYHGIINNHFVDPYTGDT 109 (423)
Q Consensus 34 ~vv~I~iDgl~~d~~~---~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P-~~hGi~~n~~~~~~~~~~ 109 (423)
-||+|-|=+++||-++ ...-|-++++ -+.|+| +.+. .+.|.|+-.=++-+..- ..|.- .|++...+.
T Consensus 195 DllvlnICSLSWdDl~aa~l~~hPl~~~F---DilF~n-FnSA-tSYSGPAaIRlLRASCGQ~~H~~----LY~pa~~qC 265 (518)
T TIGR03368 195 DLLVLNICSLSWDDLEAAGLRNHPLLSRF---DILFDN-FNSA-TSYSGPAAIRLLRASCGQESHAD----LYDPAPEQC 265 (518)
T ss_pred CEEEEEeccCcHHHHHHhcCccCchHHhh---cchhhc-cccc-cccchHHHHHHHHhccCCcchHh----hcCCccccc
Confidence 6899999999997443 3456766664 245654 3332 46777777777755432 22321 233322111
Q ss_pred eecCCCCCcccCCcchhhhHhhcCCcEEEeecCCCCcC--------CCCCCCCC-------cccccCCCCCChHHHHHHH
Q 046091 110 FTMASHEPKWWLGEPLWETVTNHGLKAATYFWPGSEVK--------KGSWNCPK-------GFCMNYNGSVPFEDRVDTV 174 (423)
Q Consensus 110 ~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~~~~~~--------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~ 174 (423)
-+|+-|++.|++.....--+.... .+.-..+. .+...+.++ +..+..+.+
T Consensus 266 --------------yLF~nLa~lGf~~~l~lnHdG~Fd~fl~~ir~~G~~~~pl~~~~g~~~~~~aFDGS-pIy~D~~vL 330 (518)
T TIGR03368 266 --------------HLFSNLAKLGFTENLLLNHDGHFDNFLQLVRENGGMQSPLMSQTGLPVAQRSFDGS-PIYDDYAVL 330 (518)
T ss_pred --------------hHHHHHHHcCCchhhcccCCCccchHHHHHHHcCCCCCCCcCccCCcHHHhccCCC-cccchHHHH
Confidence 256677777777654432111100 01111110 011112222 222233344
Q ss_pred HhhccCC--CCCCCcEEEEcCCCCCCCCCcCCC---CCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 175 LSYFDLP--SSEIPSFMTLYFEDPDHQGHKVGP---DDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 175 ~~~~~~~--~~~~p~~~~~~~~~~d~~~h~~g~---~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
.+|++.. ..+.|.-++......|+-+|.-|. ....|..-.+.+=+.+.++++.|++.| .+.+||++=.||-.-
T Consensus 331 ~rW~~~r~~~~~~~vA~~YNtIsLHDGNr~~g~~~~s~~sY~~Ra~kLlddld~F~~~le~Sg--R~vvVv~VPEHGAAl 408 (518)
T TIGR03368 331 NRWLQERLGEPDGPVALYYNTISLHDGNRIPNSGMTSLASYPLRAKKLLDDLDRFFDELEKSG--RKVVVVLVPEHGAAL 408 (518)
T ss_pred HHHHHHhhcCCCCceEEEEeeeecccCCcCCCCCccchhhhHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEecCcchhc
Confidence 4454432 233456676777777777776662 224465556666667788899999998 899999999999875
Q ss_pred CCC
Q 046091 250 TCD 252 (423)
Q Consensus 250 ~~~ 252 (423)
..+
T Consensus 409 rGD 411 (518)
T TIGR03368 409 RGD 411 (518)
T ss_pred ccc
Confidence 443
No 60
>TIGR00306 apgM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form. This model describes a set of proteins in the Archaea (two each in Methanococcus jannaschii, Methanobacterium thermoautotrophicum, and Archaeoglobus fulgidus) and in Aquifex aeolicus (1 member).
Probab=68.79 E-value=5.8 Score=38.61 Aligned_cols=49 Identities=24% Similarity=0.287 Sum_probs=32.3
Q ss_pred EEEEECCCCCCC---------CCCCCCchHHHHHHcCcccCCCcccC---CCCCCchhHHHHh
Q 046091 36 LLVSSDGFRFGY---------QFKTSTPNIHRLINNGTEAETGLIPV---FPSLTFPNHYSIV 86 (423)
Q Consensus 36 v~I~iDgl~~d~---------~~~~~~P~l~~l~~~G~~~~~~~~~~---~ps~T~p~~~si~ 86 (423)
|+|++||+.-.- ++...||||++|+++|+... +.++ +++-|-+++.||+
T Consensus 1 v~~i~DG~~D~p~~~l~gkTpLe~A~tPnlD~lA~~g~~Gl--~~~v~~G~~pgSd~a~l~ll 61 (396)
T TIGR00306 1 VLIIIDGLADRPLEELDGKTPLQVAKTPNMDRLAEEGICGL--MRTIKEGIRPGSDTAHLSIL 61 (396)
T ss_pred CEEEecCCCCCcccccCCCCchhccCCCChHHHHhcCCeee--eeeeCCCCCCCchhhhhhhc
Confidence 578899998431 23367999999999997653 3333 3445555555544
No 61
>smart00098 alkPPc Alkaline phosphatase homologues.
Probab=64.30 E-value=10 Score=37.13 Aligned_cols=90 Identities=13% Similarity=0.065 Sum_probs=57.2
Q ss_pred CcEEEEEECCCCCCC-------CC-------CCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCccc
Q 046091 33 PVVLLVSSDGFRFGY-------QF-------KTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIIN 98 (423)
Q Consensus 33 ~~vv~I~iDgl~~d~-------~~-------~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~ 98 (423)
+|||++.-||++... .. ......++++-..|+.-+. ....+-+-|.++-++++||.-.. +|.++
T Consensus 1 KNVIl~IgDGMg~~~~taaR~~~~~~~~~~~~~~~l~~d~~p~~~l~~T~-~~d~~vtDSAa~aTA~atG~KT~-ng~Ig 78 (419)
T smart00098 1 KNVILFIGDGMGVSTITAARILKGQAGGKLGEETLLAFDQFPTGALSKTY-NPDYQVTDSAATATAYLCGVKTY-NGAIG 78 (419)
T ss_pred CeEEEEEeCCCCHHHHHHHHHHhcccCCCCccccccchhhcceeeeeccC-CCCCCCCcchhhheehhhccccc-Cceee
Confidence 589999999999752 11 1124567777666644332 22333578899999999997553 34333
Q ss_pred ccccCCCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEe
Q 046091 99 NHFVDPYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATY 139 (423)
Q Consensus 99 n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~ 139 (423)
- ++..+ -.-++|.+.++++|+.+..+
T Consensus 79 v---d~~~~------------~~~~tIle~Ak~~G~~tGiV 104 (419)
T smart00098 79 V---DAATG------------KEVPSVLEWAKKAGKSTGLV 104 (419)
T ss_pred e---cCCCC------------CcchhHHHHHHHcCCcEEEE
Confidence 1 11101 01358999999999999876
No 62
>COG3885 Uncharacterized conserved protein [Function unknown]
Probab=59.17 E-value=19 Score=31.61 Aligned_cols=34 Identities=15% Similarity=0.454 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 211 TEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 211 ~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
+..+...-..|+++++... ++..+|+.+|||++.
T Consensus 143 ~~~l~~Fg~~l~~~le~~~-----~ki~lIiSaD~aHth 176 (261)
T COG3885 143 REILVKFGDNLGKALEEYE-----RKISLIISADHAHTH 176 (261)
T ss_pred HHHHHHHHHHHHHHHHHhh-----cceEEEEeccccccc
Confidence 4677888889999999888 679999999999974
No 63
>PF00245 Alk_phosphatase: Alkaline phosphatase; InterPro: IPR001952 This entry represents alkaline phosphatases (3.1.3.1 from EC) (ALP), which act as non-specific phosphomonoesterases to hydrolyse phosphate esters, optimally at high pH. The reaction mechanism involves the attack of a serine alkoxide on a phosphorus of the substrate to form a transient covalent enzyme-phosphate complex, followed by the hydrolysis of the serine phosphate. Alkaline phosphatases are found in all kingdoms of life, with the exception of some plants. Alkaline phosphatases are metalloenzymes that exist as a dimer, each monomer binding metal ions. The metal ions they carry can differ, although zinc and magnesium are the most common. For example, Escherichia coli alkaline phosphatase (encoded by phoA) requires the presence of two zinc ions bound at the M1 and M2 metal sites, and one magnesium ion bound at the M3 site []. However, alkaline phosphatases from Thermotoga maritima and Bacillus subtilis require cobalt for maximal activity []. In mammals, there are four alkaline phosphatase isozymes: placental, placental-like (germ cell), intestinal and tissue-nonspecific (liver/bone/kidney). All four isozymes are anchored to the outer surface of the plasma membrane by a covalently attached glycosylphosphatidylinositol (GPI) anchor []. Human alkaline phosphatases have four metal binding sites: two for zinc, one for magnesium, and one for calcium ion. Placental alkaline phosphatase (ALPP or PLAP) is highly polymorphic, with at least three common alleles []. Its activity is down-regulated by a number of effectors such as l-phenylalanine, 5'-AMP, and by p-nitrophenyl-phosphonate (PNPPate) []. The placental-like isozyme (ALPPL or PLAP-like) is elevated in germ cell tumours. The intestinal isozyme (ALPI or IAP) has the ability to detoxify lipopolysaccharide and prevent bacterial invasion across the gut mucosal barrier []. The tissue-nonspecific isozyme (ALPL) is, and may play a role in skeletal mineralisation. Defects in ALPL are a cause of hypophosphatasia, including infantile-type (OMIM:241500), childhood-type (OMIM:241510) and adult-type (OMIM:146300). Hhypophosphatasia is an inherited metabolic bone disease characterised by defective skeletal mineralisation []. This entry also contains the related enzyme streptomycin-6-phosphate phosphatase (3.1.3.39 from EC) (encoded by strK) from Streptomyces species. This enzyme is involved in the synthesis of the antibiotic streptomycin, specifically cleaving both streptomycin-6-phosphate and, more slowly, streptomycin-3-phosphate [].; GO: 0016791 phosphatase activity, 0008152 metabolic process; PDB: 1AJD_B 1ALH_B 2ANH_B 3BDF_A 1ELZ_B 1ELX_B 1B8J_B 2GA3_A 1ANJ_B 1Y6V_B ....
Probab=59.05 E-value=2.7 Score=41.27 Aligned_cols=90 Identities=14% Similarity=0.056 Sum_probs=50.1
Q ss_pred CcEEEEEECCCCCCCCC---------CC----CCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccc
Q 046091 33 PVVLLVSSDGFRFGYQF---------KT----STPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINN 99 (423)
Q Consensus 33 ~~vv~I~iDgl~~d~~~---------~~----~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n 99 (423)
+|||++.-||++...+. .. ..=+|++|--.|..-+. ......+-|.++-++++||.-.. .|.++-
T Consensus 2 KNVI~~IgDGmg~~~~taar~~~~~~~~~~~~~~l~~d~~~~~G~~~T~-~~d~~vtDSAa~aTA~atG~Kt~-n~~igv 79 (421)
T PF00245_consen 2 KNVILFIGDGMGPSQVTAARIYKGGKNGRPGEEFLAMDKFPYVGLVRTY-SSDSQVTDSAAAATALATGVKTY-NGAIGV 79 (421)
T ss_dssp SEEEEEEETT-SHHHHHHHHHHHHHHTTSCTTTSCTGGGSSEEEEEE---ESSSSS--HHHHHHHHHHSS--B-TT-BSB
T ss_pred ceEEEEEeCCCCHHHHHHHHHHHhhccCCcccccchhhhhhccceeecc-cCCcccCccCCcceEEeeeeeec-cCCeeE
Confidence 68999999999975210 00 11355666566766553 33344678899999999997643 444332
Q ss_pred cccCCCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEee
Q 046091 100 HFVDPYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYF 140 (423)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~ 140 (423)
. ... -..++|.+.++++|+.+..+.
T Consensus 80 ~---~~~-------------~~~~ti~e~Ak~~G~~tGvVt 104 (421)
T PF00245_consen 80 D---PDG-------------KPLETILELAKEAGKATGVVT 104 (421)
T ss_dssp E---TTS-------------CB---HHHHHHHTT-EEEEEE
T ss_pred C---CCC-------------CcchhHHHHHHHhCCeeeeee
Confidence 2 100 012589999999999998763
No 64
>TIGR03397 acid_phos_Burk acid phosphatase, Burkholderia-type. A member of this family, AcpA from Burkholderia mallei, has been charactized as a surface-bound glycoprotein with acid phosphatase activity, as can be shown with the colorigenic substrate 5-bromo-4-chloro-3-indolyl phosphate. This family shares regions of sequence similarity with phosphocholine-preferring phospholipase C enzymes (TIGR03396) from many of the same species.
Probab=54.64 E-value=4.8 Score=39.91 Aligned_cols=42 Identities=21% Similarity=0.234 Sum_probs=34.4
Q ss_pred CCCCCchHHHHHHcCcccCCCcccCCCCCCchhHHHHhhcCCcC
Q 046091 49 FKTSTPNIHRLINNGTEAETGLIPVFPSLTFPNHYSIVTGLYPA 92 (423)
Q Consensus 49 ~~~~~P~l~~l~~~G~~~~~~~~~~~ps~T~p~~~si~TG~~P~ 92 (423)
.+..+|. -.|+++=+.+++.+++.+ .-|.|+|.-++||+.|.
T Consensus 132 ~~~dlp~-~~LA~~fTlcD~y~~s~~-ggt~~N~~~l~s~~~p~ 173 (483)
T TIGR03397 132 DASKLPM-WKLAQQYTLADNFFMGAF-GGSFLNHQYLICACAPF 173 (483)
T ss_pred CcccCcH-HHHhhhhhhhhhhhcccc-CCCcchhhheeeccccc
Confidence 3457898 579999999998888875 67999999999997643
No 65
>PF05991 NYN_YacP: YacP-like NYN domain; InterPro: IPR010298 This family consists of several hypothetical bacterial proteins as well as some uncharacterised sequences from Arabidopsis thaliana. The function of this family is unknown.
Probab=49.53 E-value=16 Score=30.80 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 215 ARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 215 ~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
...|..|.+++..+...+ ..+.|+||||...
T Consensus 77 ~tAD~~Ie~~v~~~~~~~---~~v~VVTSD~~iq 107 (166)
T PF05991_consen 77 ETADDYIERLVRELKNRP---RQVTVVTSDREIQ 107 (166)
T ss_pred CCHHHHHHHHHHHhccCC---CeEEEEeCCHHHH
Confidence 468999999999988643 7899999999764
No 66
>PRK13366 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=48.02 E-value=32 Score=31.87 Aligned_cols=35 Identities=11% Similarity=0.001 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 212 EAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 212 ~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
...+.+.+.+.++-+.+++.+ .+|+|||.+||+..
T Consensus 28 ~~~~~~~~a~~~i~~~i~~~~--PDvvVii~~dH~~~ 62 (284)
T PRK13366 28 PYWQPVFKGYEFSKQWEKEEK--PDVIFLVYNDHATA 62 (284)
T ss_pred HHHHHHHHHHHHHHHHHHHhC--CCEEEEEcCCcHHh
Confidence 345566777777777776654 79999999999753
No 67
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=47.95 E-value=73 Score=27.18 Aligned_cols=137 Identities=16% Similarity=0.251 Sum_probs=70.0
Q ss_pred CcccCCCcccCCCCCCchhHHHHhhcCCcCCCCcccccccCCCCCCeeecCCCCCcccCCcchhhhHhhcCCcEEEeecC
Q 046091 63 GTEAETGLIPVFPSLTFPNHYSIVTGLYPAYHGIINNHFVDPYTGDTFTMASHEPKWWLGEPLWETVTNHGLKAATYFWP 142 (423)
Q Consensus 63 G~~~~~~~~~~~ps~T~p~~~si~TG~~P~~hGi~~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~G~~~~~~~~~ 142 (423)
|...+++.+..-|..++|++.+=.+|....+-|.-+|...++ .+.+.+.+-.-....+..
T Consensus 8 GsSItqG~~Asrpg~~~~~~~aR~l~~~~iNLGfsG~~~le~-------------------~~a~~ia~~~a~~~~ld~- 67 (178)
T PF14606_consen 8 GSSITQGACASRPGMAYPAILARRLGLDVINLGFSGNGKLEP-------------------EVADLIAEIDADLIVLDC- 67 (178)
T ss_dssp E-TT-TTTT-SSGGGSHHHHHHHHHT-EEEEEE-TCCCS--H-------------------HHHHHHHHS--SEEEEEE-
T ss_pred CChhhcCCCCCCCcccHHHHHHHHcCCCeEeeeecCccccCH-------------------HHHHHHhcCCCCEEEEEe-
Confidence 334444555566899999999999998887777777654332 344555543223322210
Q ss_pred CCCcCCCCCCCCCcccccCCCCCChHHHHHHHHhhccCCCCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHH
Q 046091 143 GSEVKKGSWNCPKGFCMNYNGSVPFEDRVDTVLSYFDLPSSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIG 222 (423)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig 222 (423)
+ .+ .....+.+++..+++.++....+.|-++.-.+..++.. + .......+....+.+.
T Consensus 68 ------~---------~N-~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~~~~~~~~---~---~~~~~~~~~~~~~~~r 125 (178)
T PF14606_consen 68 ------G---------PN-MSPEEFRERLDGFVKTIREAHPDTPILLVSPIPYPAGY---F---DNSRGETVEEFREALR 125 (178)
T ss_dssp ------S---------HH-CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE----TTTT---S-----TTS--HHHHHHHHH
T ss_pred ------e---------cC-CCHHHHHHHHHHHHHHHHHhCCCCCEEEEecCCccccc---c---CchHHHHHHHHHHHHH
Confidence 0 00 12334566777777777765556787776655544331 1 1122235666778888
Q ss_pred HHHHHHHHcCCCCCeEEEEEC
Q 046091 223 RLIDGIEKRGVFEDVTIVMVG 243 (423)
Q Consensus 223 ~ll~~l~~~~~~~~t~viits 243 (423)
+.++.+++.| ++-+.++.+
T Consensus 126 ~~v~~l~~~g--~~nl~~l~g 144 (178)
T PF14606_consen 126 EAVEQLRKEG--DKNLYYLDG 144 (178)
T ss_dssp HHHHHHHHTT---TTEEEE-H
T ss_pred HHHHHHHHcC--CCcEEEeCc
Confidence 8888888766 344444444
No 68
>PRK13364 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=45.26 E-value=30 Score=31.88 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 214 VARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 214 ~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
...+.+.+.++-+.+++.. .+++|||++||+..
T Consensus 30 ~~~v~~a~~~~~~~v~~~~--PDvvVvis~dH~~~ 62 (278)
T PRK13364 30 WKPFFDGFPPVREWLEKVK--PDVAVVFYNDHGLN 62 (278)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCEEEEECCchHhh
Confidence 5667777778888887654 78988888899875
No 69
>PRK05434 phosphoglyceromutase; Provisional
Probab=43.89 E-value=23 Score=35.73 Aligned_cols=43 Identities=19% Similarity=0.173 Sum_probs=31.4
Q ss_pred chHhHHhhhCCCCCCCCccCCccchhHHHHHHHhhCCCCC-CCCCCC
Q 046091 366 SMRTIFIGHGPQFARGRKVPSFENVQIYNVITSILKIDGA-PNNGSS 411 (423)
Q Consensus 366 ~m~~~f~~~Gp~i~~~~~~~~~~~~Diapti~~llgi~~~-~~~G~~ 411 (423)
..+++|+..||+- .......+.||+|||+++||++.+ ..+|+.
T Consensus 461 ~~~VPlII~~p~~---i~~~~~sL~DIaPTIL~LlGi~~P~~m~G~S 504 (507)
T PRK05434 461 TNPVPFILVGGKA---LRLEGGKLADIAPTILDLLGLEQPAEMTGKS 504 (507)
T ss_pred CeeeEEEEEECCc---ccCCCccHHHHHHHHHHHhCcCCCCCCCCcc
Confidence 3568999999861 111246799999999999999854 467754
No 70
>cd07364 PCA_45_Dioxygenase_B Subunit B of the Class III extradiol dioxygenase, Protocatechuate 4,5-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of protocatechuate. Protocatechuate 4,5-dioxygenase (LigAB) catalyzes the oxidization and subsequent ring-opening of protocatechuate (or 3,4-dihydroxybenzoic acid, PCA), an intermediate in the breakdown of lignin and other compounds. Protocatechuate 4,5-dioxygenase is an aromatic ring opening dioxygenase belonging to the class III extradiol enzyme family, a group of enyzmes that cleaves aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon using a non-heme Fe(II). LigAB is composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. The B subunit (LigB) is the catalytic subunit of LigAB.
Probab=41.40 E-value=42 Score=30.94 Aligned_cols=34 Identities=24% Similarity=0.194 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 213 AVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 213 ~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
....+.+.+.++-+.+++.+ .+|+|||.+||...
T Consensus 29 ~~~~~~~a~~~~~~~~~~~~--pD~vVvi~~dH~~~ 62 (277)
T cd07364 29 YWKPLFKGYQPARDWIKKNK--PDVAIIVYNDHASA 62 (277)
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCEEEEEcCchHHh
Confidence 44456666667777776554 79999999999754
No 71
>COG0696 GpmI Phosphoglyceromutase [Carbohydrate transport and metabolism]
Probab=40.62 E-value=39 Score=33.35 Aligned_cols=58 Identities=28% Similarity=0.365 Sum_probs=36.3
Q ss_pred CCcEEEEEECCCCCCCC------CCCCCchHHHHHHcCcccCC---CcccCCC----CCCchhHHHHhhcC
Q 046091 32 KPVVLLVSSDGFRFGYQ------FKTSTPNIHRLINNGTEAET---GLIPVFP----SLTFPNHYSIVTGL 89 (423)
Q Consensus 32 ~~~vv~I~iDgl~~d~~------~~~~~P~l~~l~~~G~~~~~---~~~~~~p----s~T~p~~~si~TG~ 89 (423)
++.|++|.+||+++..- ....+|++++|+++-=+..- +..=-.| ..|-.+|..|-+|+
T Consensus 3 ~k~~~LiIlDG~G~~~~~~~NAv~~A~tP~~d~l~~~~P~~~l~aSG~~VGLP~GQmGNSEVGHlnIGAGR 73 (509)
T COG0696 3 KKPVVLIILDGWGYREETEGNAVALAKTPTMDALLNNYPHTLLKASGLAVGLPEGQMGNSEVGHLNIGAGR 73 (509)
T ss_pred CCcEEEEEecCCCCCcccccCHHHhcCCchHHHHHHhCCchhhhccccccCCCCCcccCccccceeeecce
Confidence 34599999999998632 23579999999986422210 0000001 35677788888884
No 72
>cd07950 Gallate_Doxase_N The N-terminal domain of the Class III extradiol dioxygenase, Gallate Dioxygenase, which catalyzes the oxidization and subsequent ring-opening of gallate. Gallate Dioxygenase catalyzes the oxidization and subsequent ring-opening of gallate, an intermediate in the degradation of the aromatic compound, syringate. The reaction product of gallate dioxygenase is 4-oxalomesaconate. The amino acid sequence of the N-terminal and C-terminal regions of gallate dioxygenase exhibits homology with the sequence of PCA 4,5-dioxygenase B (catalytic) and A subunits, respectively. The enzyme is estimated to be a homodimer according to the Escherichia coli enzyme. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. In this subfamily, the subunits A and B are fused to make a single polypeptide chain. The dimer interface for this subfamily may resemble the tetramer interface of classical LigAB en
Probab=40.23 E-value=42 Score=30.97 Aligned_cols=34 Identities=18% Similarity=0.038 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 214 VARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 214 ~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
.+.+.+.+.++-+.+++.+ .+|+|||++||+..-
T Consensus 30 ~~~~~~a~~~~~~~i~~~~--PD~iVvi~~dH~~~f 63 (277)
T cd07950 30 WAPIFDGYEPVKQWLAEQK--PDVLFMVYNDHVTSF 63 (277)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCEEEEEcCcHHHHh
Confidence 4566667777777776654 789999999998753
No 73
>PLN02538 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Probab=39.44 E-value=40 Score=34.23 Aligned_cols=49 Identities=8% Similarity=0.043 Sum_probs=36.2
Q ss_pred CCCchHhHHhhhCCCCCCCCccCC----ccchhHHHHHHHhhCCCCC-CCCCCC
Q 046091 363 AVFSMRTIFIGHGPQFARGRKVPS----FENVQIYNVITSILKIDGA-PNNGSS 411 (423)
Q Consensus 363 ~~~~m~~~f~~~Gp~i~~~~~~~~----~~~~Diapti~~llgi~~~-~~~G~~ 411 (423)
.+...+++|+..||+++++..+.. -.+.||||||+++||++.| .+.||+
T Consensus 502 ~HT~npVP~Ii~g~~~~~~~~l~~~l~~~gLaDVApTIL~lLGl~~P~emt~sl 555 (558)
T PLN02538 502 SHTLAPVPVAIGGPGLPPGVRFRDDLPTAGLANVAATVMNLHGFEAPADYEPSL 555 (558)
T ss_pred CCCCCCcCEEEEeCCcccCcccccCccCCcHHhHHHHHHHHhCCCCchhcCcch
Confidence 334567999999998876543321 1489999999999999854 466765
No 74
>cd07369 PydA_Rs_like PydA is a Class III Extradiol ring-cleavage dioxygenase required for the degradation of 3-hydroxy-4-pyridone (HP). This subfamily is composed of Rhizobium sp. PydA and similar proteins. PydA is required for the degradation of 3-hydroxy-4-pyridone (HP), an intermediate in the Leucaena toxin mimosine degradation pathway. It is a member of the class III extradiol dioxygenase family, a group of enzymes that use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=37.08 E-value=58 Score=30.85 Aligned_cols=33 Identities=24% Similarity=0.220 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCC
Q 046091 213 AVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGM 247 (423)
Q Consensus 213 ~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~ 247 (423)
..+.+-..+.++-+.+++.+ .+++|||.+||..
T Consensus 27 ~~~~~~~a~~~l~~~v~~~~--PD~iVV~~sdH~~ 59 (329)
T cd07369 27 VRARTEEATLKLGRTLTAAR--PDVIIAFLDDHFE 59 (329)
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCEEEEEcCCchh
Confidence 44555666666666666544 7899999999976
No 75
>PF05827 ATP-synt_S1: Vacuolar ATP synthase subunit S1 (ATP6S1); InterPro: IPR024722 This family consists of metazoan vacuolar ATP synthase subunit S1 proteins [] and fungal proteins belonging to the BIG family. In Candida albicans BIG is required for normal beta-1,6-glucan synthesis, hyphal morphogenesis, adhesion and virulence [].
Probab=36.88 E-value=60 Score=29.92 Aligned_cols=51 Identities=10% Similarity=0.204 Sum_probs=40.5
Q ss_pred CCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCC
Q 046091 185 IPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDH 245 (423)
Q Consensus 185 ~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDH 245 (423)
++.++.+.++.....+ ....+.+..-|..|++++..+...+ +.++|+||+.
T Consensus 127 ~~~vi~V~l~~l~~~~-------~~R~~~L~~nD~~l~~vl~~l~s~~---~ytvIyts~~ 177 (282)
T PF05827_consen 127 KPRVIRVDLPPLPSSS-------ESRKEALSDNDEFLRKVLSKLPSPD---PYTVIYTSTP 177 (282)
T ss_pred CCcEEEEECCCCCCcc-------ccchhhhhhhhHHHHHHHHhcCCCC---cEEEEEEccC
Confidence 6788999888765433 3456789999999999999998652 4889999976
No 76
>COG4102 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=36.32 E-value=1.9e+02 Score=27.39 Aligned_cols=64 Identities=14% Similarity=0.134 Sum_probs=43.4
Q ss_pred CCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCeEEEEECCCCCCC
Q 046091 182 SSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRG-VFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 182 ~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~-~~~~t~viitsDHG~~~ 249 (423)
....|...++.+...|.--...+ ..-...+.++..+..|-....+.| .+++|+|+..|+-|.+.
T Consensus 264 ~~~gp~vaalsl~gfDTH~nq~~----aq~~La~ql~~~da~l~a~~t~lG~~w~dt~i~t~tEFgRta 328 (418)
T COG4102 264 LGPGPQVAALSLGGFDTHANQND----AQGRLATQLGGLDAALDAFETELGARWKDTVIVTATEFGRTA 328 (418)
T ss_pred cCCCceEEEEeecCccccccccc----hhhHHHHHhcchHHHHHHHHhhccccccceEEEEeeccccce
Confidence 45678889998888775433322 223345555555555555566667 78999999999998874
No 77
>PRK13365 protocatechuate 4,5-dioxygenase subunit beta; Provisional
Probab=35.91 E-value=50 Score=30.49 Aligned_cols=33 Identities=12% Similarity=0.086 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 214 VARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 214 ~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
...+.+.+.++-+.+++.. .+|+|||.|||+..
T Consensus 30 ~~~~~~a~~~i~~~v~~~~--PDviVvi~sdH~~~ 62 (279)
T PRK13365 30 WKPLFDGYEPVAAWLAEQK--ADVLVFFYNDHCTT 62 (279)
T ss_pred HHHHHHHHHHHHHHHHHhC--CCEEEEEcCchHHH
Confidence 3456666667777776554 78999999999963
No 78
>PF00231 ATP-synt: ATP synthase This Pfam entry corresponds to chain g; InterPro: IPR000131 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. F-ATPases (also known as F1F0-ATPase, or H(+)-transporting two-sector ATPase) (3.6.3.14 from EC) are composed of two linked complexes: the F1 ATPase complex is the catalytic core and is composed of 5 subunits (alpha, beta, gamma, delta, epsilon), while the F0 ATPase complex is the membrane-embedded proton channel that is composed of at least 3 subunits (A-C), nine in mitochondria (A-G, F6, F8). Both the F1 and F0 complexes are rotary motors that are coupled back-to-back. In the F1 complex, the central gamma subunit forms the rotor inside the cylinder made of the alpha(3)beta(3) subunits, while in the F0 complex, the ring-shaped C subunits forms the rotor. The two rotors rotate in opposite directions, but the F0 rotor is usually stronger, using the force from the proton gradient to push the F1 rotor in reverse in order to drive ATP synthesis []. These ATPases can also work in reverse to hydrolyse ATP to create a proton gradient. The ATPase F1 complex gamma subunit forms the central shaft that connects the F0 rotary motor to the F1 catalytic core. The gamma subunit functions as a rotary motor inside the cylinder formed by the alpha(3)beta(3) subunits in the F1 complex []. The best-conserved region of the gamma subunit is its C terminus, which seems to be essential for assembly and catalysis. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0046933 hydrogen ion transporting ATP synthase activity, rotational mechanism, 0046961 proton-transporting ATPase activity, rotational mechanism, 0015986 ATP synthesis coupled proton transport, 0045261 proton-transporting ATP synthase complex, catalytic core F(1); PDB: 3OFN_G 3FKS_P 3OEE_Y 2HLD_Y 3OEH_Y 2XOK_G 3ZRY_G 3OE7_P 2WPD_G 3OAA_e ....
Probab=35.70 E-value=33 Score=31.81 Aligned_cols=18 Identities=33% Similarity=0.545 Sum_probs=12.2
Q ss_pred CCCCeEEEEECCCCCCCC
Q 046091 233 VFEDVTIVMVGDHGMVGT 250 (423)
Q Consensus 233 ~~~~t~viitsDHG~~~~ 250 (423)
.....+|+||||+|++.-
T Consensus 73 ~~~~~~ivitSDrGLCG~ 90 (290)
T PF00231_consen 73 VKKVLLIVITSDRGLCGG 90 (290)
T ss_dssp -SCEEEEEE--STSSSTT
T ss_pred cceEEEEEEecCcccccc
Confidence 346688999999999963
No 79
>cd07949 PCA_45_Doxase_B_like_1 The B subunit of unknown Class III extradiol dioxygenases with similarity to Protocatechuate 4,5-dioxygenase. This subfamily is composed of proteins of unknown function with similarity to the B subunit of Protocatechuate 4,5-dioxygenase (LigAB). LigAB belongs to the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Dioxygenases play key roles in the degradation of aromatic compounds. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=35.04 E-value=48 Score=30.54 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 214 VARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 214 ~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
...+-+.+.++-+.+++.. .+++|||++||+..
T Consensus 30 ~~~~~~a~~~~~~~v~~~~--PD~iVvis~dH~~~ 62 (276)
T cd07949 30 WKPFFDGFPPVHDWLEKAK--PDVAVVFYNDHGLN 62 (276)
T ss_pred HHHHHHHHHHHHHHHHHcC--CCEEEEECCcHHhh
Confidence 4455566666667776553 78888888899764
No 80
>PRK05621 F0F1 ATP synthase subunit gamma; Validated
Probab=33.65 E-value=49 Score=30.61 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.0
Q ss_pred EEEEECCCCCCCCC
Q 046091 238 TIVMVGDHGMVGTC 251 (423)
Q Consensus 238 ~viitsDHG~~~~~ 251 (423)
+|+|+||+|.+...
T Consensus 77 ~ivitSd~GLCG~f 90 (284)
T PRK05621 77 YIVVTSDRGLCGGY 90 (284)
T ss_pred EEEEeCCCcccchh
Confidence 79999999999743
No 81
>TIGR01307 pgm_bpd_ind 2,3-bisphosphoglycerate-independent phosphoglycerate mutase. This protein is about double in length of, and devoid of homology to the form of phosphoglycerate mutase that uses 2,3-bisphosphoglycerate as a cofactor.
Probab=31.55 E-value=40 Score=33.87 Aligned_cols=44 Identities=11% Similarity=0.080 Sum_probs=31.7
Q ss_pred CchHhHHhhhCCC-CCCCCccCCccchhHHHHHHHhhCCCCC-CCCCC
Q 046091 365 FSMRTIFIGHGPQ-FARGRKVPSFENVQIYNVITSILKIDGA-PNNGS 410 (423)
Q Consensus 365 ~~m~~~f~~~Gp~-i~~~~~~~~~~~~Diapti~~llgi~~~-~~~G~ 410 (423)
...+++||..||+ ++ .......++||+|||++++|++.+ ..+|+
T Consensus 453 T~~~VP~Ii~~p~~i~--~~~~~~sL~DIaPTiLdL~Gi~~P~emdG~ 498 (501)
T TIGR01307 453 TTNPVPFVCVGAKNVK--LIREGGVLADIAPTILDLMGLEQPAEMTGK 498 (501)
T ss_pred CCeEeeEEEEECCccc--ccCCCceEhHHHHHHHHHhCcCCCCCCCCc
Confidence 3467899999984 32 112345799999999999999854 45674
No 82
>TIGR01146 ATPsyn_F1gamma ATP synthase, F1 gamma subunit. This model describes the ATP synthase gamma subunit in bacteria and its equivalents in organelles, namely, mitochondria and chloroplast. F1/F0-ATP synthase is a multisubunit, membrane associated enzyme found in bacteria and organelles of higher eukaryotes, namely, mitochondria and chloroplast. This enzyme is principally involed in the synthesis of ATP from ADP and inorganic phosphate by coupling the energy derived from the proton electrochemical gradient across the biological membrane. A brief description of this multisubunit enzyme complex: F1 and F0 represent two major clusters of subunits. The gamma subunit is the part of F1 cluster. Surrounding the gamma subunit in a cylinder-like structure are three alpha and three subunits in an alternating fashion. This is the central catalytic unit whose different conformations permit the binding of ADP and inorganic phosphate and release of ATP.
Probab=30.32 E-value=63 Score=29.93 Aligned_cols=14 Identities=29% Similarity=0.672 Sum_probs=12.0
Q ss_pred EEEEECCCCCCCCC
Q 046091 238 TIVMVGDHGMVGTC 251 (423)
Q Consensus 238 ~viitsDHG~~~~~ 251 (423)
+|+|+||+|.+...
T Consensus 78 ~ivitSDrGLCG~f 91 (287)
T TIGR01146 78 ILVITSDRGLCGGY 91 (287)
T ss_pred EEEEeCCCCccccc
Confidence 68999999999753
No 83
>cd07368 PhnC_Bs_like PhnC is a Class III Extradiol ring-cleavage dioxygenase involved in the polycyclic aromatic hydrocarbon (PAH) catabolic pathway. This subfamily is composed of Burkholderia sp. PhnC and similar poteins. PhnC is one of nine protein products encoded by the phn locus. These proteins are involved in the polycyclic aromatic hydrocarbon (PAH) catabolic pathway. PhnC is a member of the class III extradiol dioxygenase family, a group os enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=29.10 E-value=87 Score=28.87 Aligned_cols=36 Identities=8% Similarity=-0.084 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 212 EAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 212 ~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
+....+-..+.++-+.+++.+ .+|+|||+.||....
T Consensus 26 ~~~~~~~~a~~~~~~~v~~~~--pD~ivvi~~dH~~~f 61 (277)
T cd07368 26 AQREICWHAYAICAERLAALQ--VTSVVVIGDDHYTLF 61 (277)
T ss_pred HHHHHHHHHHHHHHHHHHHcC--CCEEEEEcCchHhhh
Confidence 334445567777777777654 789999989998753
No 84
>cd07366 3MGA_Dioxygenase Subunit B of the Class III Extradiol ring-cleavage dioxygenase, 3-O-Methylgallate Dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 3-O-Methylgallate. 3-O-Methylgallate Dioxygenase catalyzes the oxidization and subsequent ring-opening of 3-O-Methylgallate (3MGA) between carbons 2 and 3. 3-O-Methylgallate Dioxygenase is a key enzyme in the syringate degradation pathway, in which the syringate is first converted to 3-O-Methylgallate by O-demethylase. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which uses a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. LigAB-like enzymes are usually composed of two subunits, designated A and B, which form a tetramer composed of two copies of each subunit. This model represents the catalytic subunit, B.
Probab=28.13 E-value=68 Score=30.36 Aligned_cols=29 Identities=24% Similarity=0.284 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEECCCCC
Q 046091 217 IDRMIGRLIDGIEKRGVFEDVTIVMVGDHGM 247 (423)
Q Consensus 217 ~D~~ig~ll~~l~~~~~~~~t~viitsDHG~ 247 (423)
+.+.+.++-+.+++.. .+++|||+.||..
T Consensus 71 ~~~a~~~~~~~i~~~~--PDvlVIispDH~~ 99 (328)
T cd07366 71 CQAALDRLADFIRAAR--IDVAVIVGDDQKE 99 (328)
T ss_pred HHHHHHHHHHHHHHhC--CCEEEEEcCccHh
Confidence 3355556666666543 7999999999984
No 85
>cd07367 CarBb CarBb is the B subunit of the Class III Extradiol ring-cleavage dioxygenase, 2-aminophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. CarBb is the B subunit of 2-aminophenol 1,6-dioxygenase (CarB), which catalyzes the oxidization and subsequent ring-opening of 2-aminophenyl-2,3-diol. It is a key enzyme in the carbazole degradation pathway isolated from bacterial strains with carbazole degradation ability. The enzyme is a heterotetramer composed of two A and two B subunits. CarB belongs to the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. Although the enzyme was originally isolated as a meta-cleavage enzyme for 2'-aminobiphenyl-2,3-diol involved in carbazole degradation, it has also shown high specificity for 2,3-dihydroxybiphenyl.
Probab=27.78 E-value=1e+02 Score=28.30 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 212 EAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 212 ~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
+..+.+-+.+.++-+.+++.. .+++|||++||...
T Consensus 22 ~~~~~~~~al~~~~~~l~~~~--Pd~ivvis~dH~~~ 56 (268)
T cd07367 22 DQAARVVQGMAEIGRRVRESR--PDVLVVISSDHLFN 56 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHcC--CCEEEEEeCchhhh
Confidence 344555566666666665432 79999999999764
No 86
>PF12249 AftA_C: Arabinofuranosyltransferase A C terminal; InterPro: IPR020959 The arabinofuranosyltransferase enzyme AftA is involved in cell wall arabinan biosynthesis in bacteria []. It catalyses the addition of the first key arabinofuranosyl residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol to the galactan domain of the cell wall, thus priming the galactan for further elaboration by the arabinofuranosyltransferases. As this enzyme is important for cell growth and is found in some important pathogens, such as Mycobacterium tuberculosis, it represents a potential target for the devlopment of new antibacterial drugs. This entry represents the C-terminal domain of AftA.; GO: 0016757 transferase activity, transferring glycosyl groups, 0044038 cell wall macromolecule biosynthetic process, 0005886 plasma membrane, 0016021 integral to membrane
Probab=27.54 E-value=1.7e+02 Score=24.70 Aligned_cols=53 Identities=23% Similarity=0.368 Sum_probs=31.4
Q ss_pred EcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 191 LYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 191 ~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
+-+.++|.-|+.-.-.-+....-+..+|+.|.+. .|...+-+||+|.|+++..
T Consensus 12 ~AYtDTDG~G~RaDr~P~~a~~yY~~id~~I~~~------tG~~~~~tVvLT~d~~Fls 64 (178)
T PF12249_consen 12 VAYTDTDGNGERADRRPPDAERYYPEIDAAIREQ------TGRPPDDTVVLTDDYSFLS 64 (178)
T ss_pred eeeecCCCCCcccccCCCchHHhHHHHHHHHHHh------cCCCCCCeEEEeccccceE
Confidence 3456677766543222222234456677776443 2444677899999999864
No 87
>TIGR02049 gshA_ferroox glutamate--cysteine ligase, T. ferrooxidans family. This family consists of a rare family of glutamate--cysteine ligases, demonstrated first in Thiobacillus ferrooxidans and present in a few other Proteobacteria. It is the first of two enzymes for glutathione biosynthesis. It is also called gamma-glutamylcysteine synthetase.
Probab=26.63 E-value=3.5e+02 Score=26.07 Aligned_cols=63 Identities=17% Similarity=0.283 Sum_probs=48.7
Q ss_pred CCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 184 EIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 184 ~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
=.|.++--+|..-+...-.-+. .....-..+|..|.++-++.++-|+.+.-.|||=+|.|.-.
T Consensus 208 IDPWlInp~f~~c~~vdF~~~~---G~e~lA~~Vd~~L~kir~KY~eYgI~e~PfViVKADaGTYG 270 (403)
T TIGR02049 208 IDPWLINPYFEKCDGIDFDDRE---GEDALATAVDQVLSKTQKKYEEYGIHTQPYVIVKADAGTYG 270 (403)
T ss_pred CCcccccHhhhccCCcCCCccc---cHHHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCCCC
Confidence 3688888888777665543322 22345567999999999999999999999999999999754
No 88
>COG4077 Uncharacterized protein conserved in archaea [Function unknown]
Probab=26.44 E-value=1.2e+02 Score=24.25 Aligned_cols=33 Identities=18% Similarity=0.405 Sum_probs=26.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCe
Q 046091 205 PDDPEITEAVARIDRMIGRLIDGIEKRGVFEDV 237 (423)
Q Consensus 205 ~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t 237 (423)
+.|.+-.+.+..+|+.|.++.+.+.+..++.+|
T Consensus 70 ~es~Eg~elI~e~De~vr~~vei~te~~i~~d~ 102 (156)
T COG4077 70 KESFEGVELIKEIDEFVRRIVEILTENPIYPDT 102 (156)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhhhcCCCccCc
Confidence 457788899999999999999998876554443
No 89
>PRK13373 putative dioxygenase; Provisional
Probab=24.74 E-value=1.3e+02 Score=28.51 Aligned_cols=35 Identities=23% Similarity=0.225 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCC
Q 046091 213 AVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVG 249 (423)
Q Consensus 213 ~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~ 249 (423)
....+.+.+.++-+.+++.. .|++|||.+||....
T Consensus 27 ~~~~v~~a~~~ir~~i~e~k--PDVvVv~~nDH~~~F 61 (344)
T PRK13373 27 VRRRLLQAADRLGRSLDAAR--PDVIIAFLDDHFENH 61 (344)
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCEEEEEccchhhhh
Confidence 34456666666666666543 799999999998753
No 90
>TIGR03323 alt_F1F0_F1_gam alternate F1F0 ATPase, F1 subunit gamma. A small number of taxonomically diverse prokaryotic species, including Methanosarcina barkeri, have what appears to be a second ATP synthase, in addition to the normal F1F0 ATPase in bacteria and A1A0 ATPase in archaea. These enzymes use ion gradients to synthesize ATP, and in principle may run in either direction. This model represents the F1 gamma subunit of this apparent second ATP synthase.
Probab=23.70 E-value=1e+02 Score=28.54 Aligned_cols=13 Identities=46% Similarity=0.820 Sum_probs=11.6
Q ss_pred EEEEECCCCCCCC
Q 046091 238 TIVMVGDHGMVGT 250 (423)
Q Consensus 238 ~viitsDHG~~~~ 250 (423)
+|+|+||+|++.-
T Consensus 74 ~IvitSDrGLCG~ 86 (285)
T TIGR03323 74 AIVFGSDQGLVGQ 86 (285)
T ss_pred EEEEECCCcCchH
Confidence 7999999999964
No 91
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=23.31 E-value=4.3e+02 Score=22.10 Aligned_cols=50 Identities=12% Similarity=0.177 Sum_probs=32.3
Q ss_pred CCCCCcEEEEcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEC
Q 046091 182 SSEIPSFMTLYFEDPDHQGHKVGPDDPEITEAVARIDRMIGRLIDGIEKRGVFEDVTIVMVG 243 (423)
Q Consensus 182 ~~~~p~~~~~~~~~~d~~~h~~g~~s~~~~~~~~~~D~~ig~ll~~l~~~~~~~~t~viits 243 (423)
...+|+++++.+-..|.... . ....+.+.+.++++.++++. .++-|++++
T Consensus 64 ~~~~pd~Vii~~G~ND~~~~---~-------~~~~~~~~l~~li~~i~~~~--~~~~iiv~~ 113 (191)
T cd01836 64 PETRFDVAVISIGVNDVTHL---T-------SIARWRKQLAELVDALRAKF--PGARVVVTA 113 (191)
T ss_pred ccCCCCEEEEEecccCcCCC---C-------CHHHHHHHHHHHHHHHHhhC--CCCEEEEEC
Confidence 35689999999888886531 1 12345566677777777642 456677665
No 92
>PF02739 5_3_exonuc_N: 5'-3' exonuclease, N-terminal resolvase-like domain; InterPro: IPR020046 The N-terminal and internal 5'3'-exonuclease domains are commonly found together, and are most often associated with 5' to 3' nuclease activities. The XPG protein signatures (PDOC00658 from PROSITEDOC) are never found outside the '53EXO' domains. The latter are found in more diverse proteins [, , ]. The number of amino acids that separate the two 53EXO domains, and the presence of accompanying motifs allow the diagnosis of several protein families. In the eubacterial type A DNA-polymerases, the N-terminal and internal domains are separated by a few amino acids, usually four. The pattern DNA_POLYMERASE_A (IPR001098 from INTERPRO) is always present towards the C terminus. Several eukaryotic structure-dependent endonucleases and exonucleases have the 53EXO domains separated by 24 to 27 amino acids, and the XPG protein signatures are always present. In several proteins from herpesviridae, the two 53EXO domains are separated by 50 to 120 amino acids. These proteins are implicated in the inhibition of the expression of the host genes. Eukaryotic DNA repair proteins with 600 to 700 amino acids between the 53_EXO domains all carry the XPG protein signatures. This entry represents the N-terminal resolvase-like domain, which has a 3-layer alpha/beta/alpha core structure and contains an alpha-helical arch [, ].; GO: 0003677 DNA binding, 0008409 5'-3' exonuclease activity; PDB: 1TAQ_A 1BGX_T 1TAU_A 1XO1_B 1EXN_A 1UT8_A 1UT5_B 3H7I_A 3H8J_A 3H8S_A ....
Probab=22.71 E-value=1.5e+02 Score=24.95 Aligned_cols=32 Identities=22% Similarity=0.373 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCCCC
Q 046091 216 RIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMVGT 250 (423)
Q Consensus 216 ~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~~~ 250 (423)
+.|+.||.+.....+.+ .-++|+++|.-+...
T Consensus 109 EADDvIatla~~~~~~~---~~v~IvS~DkD~~QL 140 (169)
T PF02739_consen 109 EADDVIATLAKKASEEG---FEVIIVSGDKDLLQL 140 (169)
T ss_dssp -HHHHHHHHHHHHHHTT---CEEEEE-SSGGGGGG
T ss_pred cHHHHHHHHHhhhccCC---CEEEEEcCCCCHHHh
Confidence 37999999999998874 458999999888654
No 93
>PRK13424 F0F1 ATP synthase subunit gamma; Provisional
Probab=22.31 E-value=1e+02 Score=28.60 Aligned_cols=14 Identities=21% Similarity=0.695 Sum_probs=11.8
Q ss_pred EEEEECCCCCCCCC
Q 046091 238 TIVMVGDHGMVGTC 251 (423)
Q Consensus 238 ~viitsDHG~~~~~ 251 (423)
+|||+||+|.+.-.
T Consensus 79 ~IvitSDrGLCG~f 92 (291)
T PRK13424 79 IVLITSDRGLCGSF 92 (291)
T ss_pred EEEEeCCCcccccc
Confidence 68899999999743
No 94
>PRK13370 mhpB 3-(2,3-dihydroxyphenyl)propionate dioxygenase; Provisional
Probab=21.52 E-value=1.7e+02 Score=27.56 Aligned_cols=35 Identities=14% Similarity=0.213 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCCCC
Q 046091 212 EAVARIDRMIGRLIDGIEKRGVFEDVTIVMVGDHGMV 248 (423)
Q Consensus 212 ~~~~~~D~~ig~ll~~l~~~~~~~~t~viitsDHG~~ 248 (423)
+....+++.+.++-+.+++.. .+++|||..||...
T Consensus 22 ~~~~~v~~a~~~l~~~l~~~~--PD~iVIigpdH~~~ 56 (313)
T PRK13370 22 EVLAEVNAVIAAAREFVAAFD--PELVVLFAPDHYNG 56 (313)
T ss_pred HHHHHHHHHHHHHHHHHHHhC--CCEEEEEcCCcccc
Confidence 345566677777777776543 68999999999875
No 95
>PRK13427 F0F1 ATP synthase subunit gamma; Provisional
Probab=21.52 E-value=1.2e+02 Score=28.18 Aligned_cols=14 Identities=14% Similarity=0.584 Sum_probs=11.9
Q ss_pred EEEEECCCCCCCCC
Q 046091 238 TIVMVGDHGMVGTC 251 (423)
Q Consensus 238 ~viitsDHG~~~~~ 251 (423)
+|+|+||+|++...
T Consensus 79 ~ivitSDrGLcG~f 92 (289)
T PRK13427 79 LLIITANRGLCGGF 92 (289)
T ss_pred EEEEeCCCCccccc
Confidence 68999999999743
No 96
>PRK13423 F0F1 ATP synthase subunit gamma; Provisional
Probab=20.71 E-value=1.1e+02 Score=28.47 Aligned_cols=14 Identities=29% Similarity=0.634 Sum_probs=12.1
Q ss_pred EEEEECCCCCCCCC
Q 046091 238 TIVMVGDHGMVGTC 251 (423)
Q Consensus 238 ~viitsDHG~~~~~ 251 (423)
+|+|+||+|.+...
T Consensus 78 ~IvitSDrGLCG~f 91 (288)
T PRK13423 78 LVVVTSDRGLCGGF 91 (288)
T ss_pred EEEEeCCCCCcchh
Confidence 89999999999743
Done!