BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046097
(603 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 99/171 (57%), Gaps = 4/171 (2%)
Query: 65 HCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREF 124
+RFS ++ A+ +FS N LG GGFG VYK + + +AVK L GE +F
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTL-VAVKRLKEERXQGGELQF 82
Query: 125 HNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDR-KCEELMEWNK 183
E+ + S +++ L GF R +L+Y M N S+ L +R + + ++W K
Sbjct: 83 QTEVEMISMAVHRNLLRLRGFCMTPTER--LLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 184 RFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
R IA+ A+GL YLH C+P +IH D+K +NILLD +F+A +GDFGLA+L
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 62/119 (52%), Gaps = 3/119 (2%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFERANLISW 519
++RGT+ +IAPEY G SEK DV+ +GV++L LI+G+R + + ++ + L+ W
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL--ARLANDDDVMLLDW 259
Query: 520 ARQLAYNGKLLDLVDPSIHSLDKDXXXXXXXXXXXXXXR-SPSKRLTMKDIVEMLTGEA 577
+ L KL LVD + KD + SP +R M ++V ML G+
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 318
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 99/171 (57%), Gaps = 4/171 (2%)
Query: 65 HCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREF 124
+RFS ++ A+ +F N LG GGFG VYK + + +AVK L + GE +F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKEERTQGGELQF 74
Query: 125 HNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDR-KCEELMEWNK 183
E+ + S +++ L GF R +L+Y M N S+ L +R + + ++W K
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTER--LLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 184 RFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
R IA+ A+GL YLH C+P +IH D+K +NILLD +F+A +GDFGLA+L
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFERANLISW 519
++RG + +IAPEY G SEK DV+ +GV++L LI+G+R + + ++ + L+ W
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL--ARLANDDDVMLLDW 251
Query: 520 ARQLAYNGKLLDLVDPSIHSLDKDXXXXXXXXXXXXXXR-SPSKRLTMKDIVEMLTGEA 577
+ L KL LVD + KD + SP +R M ++V ML G+
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 94/174 (54%), Gaps = 16/174 (9%)
Query: 69 FSYNLIRRATASFSP------SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE- 121
FS+ ++ T +F N++G GGFG VYK V +++ +AVK L + + E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEE 72
Query: 122 --REFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM 179
++F E+ + + ++V LLGF+SD G L L+Y M N SL D L +
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 180 EWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
W+ R +IA A G+ +LH E IH DIK +NILLD F AKI DFGLAR
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISG 497
GT Y+APE G ++ K D+YSFGV++L +I+G
Sbjct: 197 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 94/174 (54%), Gaps = 16/174 (9%)
Query: 69 FSYNLIRRATASFSP------SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE- 121
FS+ ++ T +F N++G GGFG VYK V +++ +AVK L + + E
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEE 72
Query: 122 --REFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM 179
++F E+ + + ++V LLGF+SD G L L+Y M N SL D L +
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 180 EWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
W+ R +IA A G+ +LH E IH DIK +NILLD F AKI DFGLAR
Sbjct: 131 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISG 497
GT Y+APE G ++ K D+YSFGV++L +I+G
Sbjct: 197 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 94/174 (54%), Gaps = 16/174 (9%)
Query: 69 FSYNLIRRATASFSP------SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE- 121
FS+ ++ T +F N++G GGFG VYK V +++ +AVK L + + E
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEE 66
Query: 122 --REFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM 179
++F E+ + + ++V LLGF+SD G L L+Y M N SL D L +
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSD--GDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 180 EWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
W+ R +IA A G+ +LH E IH DIK +NILLD F AKI DFGLAR
Sbjct: 125 SWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLAR 175
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISG 497
GT Y+APE G ++ K D+YSFGV++L +I+G
Sbjct: 191 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 8/165 (4%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASS 133
+ AT +F +GHG FG VYK V+ ++ +A+K S QG EF E+ S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKRRTPESS-QGIEEFETEIETLSF 91
Query: 134 LDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEEL-MEWNKRFEIAIDIA 192
PH+VSL+GF +R ++LIY+ MEN +L+ L + M W +R EI I A
Sbjct: 92 CRHPHLVSLIGFCDERN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
+GL YLH +IH D+K NILLD +F KI DFG+++ TE
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 461 MRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFERANLISWA 520
++GT+ YI PEY G L+EK DVYSFGV++ ++ R + V + P E NL WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPR---EMVNLAEWA 256
Query: 521 RQLAYNGKLLDLVDPSI 537
+ NG+L +VDP++
Sbjct: 257 VESHNNGQLEQIVDPNL 273
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/165 (40%), Positives = 92/165 (55%), Gaps = 8/165 (4%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASS 133
+ AT +F +GHG FG VYK V+ ++ +A+K S QG EF E+ S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAK-VALKRRTPESS-QGIEEFETEIETLSF 91
Query: 134 LDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEEL-MEWNKRFEIAIDIA 192
PH+VSL+GF +R ++LIY+ MEN +L+ L + M W +R EI I A
Sbjct: 92 CRHPHLVSLIGFCDERN--EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAA 149
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
+GL YLH +IH D+K NILLD +F KI DFG+++ TE
Sbjct: 150 RGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE 191
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 461 MRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFERANLISWA 520
++GT+ YI PEY G L+EK DVYSFGV++ ++ R + V + P E NL WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPR---EMVNLAEWA 256
Query: 521 RQLAYNGKLLDLVDPSI 537
+ NG+L +VDP++
Sbjct: 257 VESHNNGQLEQIVDPNL 273
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 92/174 (52%), Gaps = 16/174 (9%)
Query: 69 FSYNLIRRATASFSP------SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE- 121
FS+ ++ T +F N+ G GGFG VYK V +++ +AVK L + + E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTT--VAVKKLAAMVDITTEE 63
Query: 122 --REFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM 179
++F E+ + + ++V LLGF+SD G L L+Y N SL D L +
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSD--GDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 180 EWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
W+ R +IA A G+ +LH E IH DIK +NILLD F AKI DFGLAR
Sbjct: 122 SWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLAR 172
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 461 MRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISG 497
+ GT Y APE G ++ K D+YSFGV++L +I+G
Sbjct: 186 IVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLL 143
++G G FG+V++A S +AVKIL ER EF E+++ L P+IV +
Sbjct: 44 KIGAGSFGTVHRAEWHGSD--VAVKIL-MEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + L ++ E + SL L E ++ +R +A D+AKG+ YLH+
Sbjct: 101 GAVT--QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
PP++H D+K N+L+D + K+ DFGL+RLK +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL 194
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRP 500
GT ++APE +EK DVYSFGV++ L + ++P
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLL 143
++G G FG+V++A S +AVKIL ER EF E+++ L P+IV +
Sbjct: 44 KIGAGSFGTVHRAEWHGSD--VAVKIL-MEQDFHAERVNEFLREVAIMKRLRHPNIVLFM 100
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + L ++ E + SL L E ++ +R +A D+AKG+ YLH+
Sbjct: 101 GAVT--QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-N 157
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
PP++H ++K N+L+D + K+ DFGL+RLK +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL 194
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 451 KSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRP 500
K+ S+ S GT ++APE +EK DVYSFGV++ L + ++P
Sbjct: 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 84 SNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPH 138
S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+ +C H
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN-------RSLQDALLDRKCEELMEWNKRFEIAIDI 191
+V LLG S +G+ ++I ELM RSL+ A+ + +K ++A +I
Sbjct: 90 VVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 192 AKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 148 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 84 SNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPH 138
S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+ +C H
Sbjct: 20 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 79
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN-------RSLQDALLDRKCEELMEWNKRFEIAIDI 191
+V LLG S +G+ ++I ELM RSL+ A+ + +K ++A +I
Sbjct: 80 VVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 137
Query: 192 AKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 138 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLA 131
A + S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN--------- 182
+C H+V LLG S +G+ ++I ELM L+ L + E ME N
Sbjct: 68 KEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLS 123
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
K ++A +IA G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLA 131
A + S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN--------- 182
+C H+V LLG S +G+ ++I ELM L+ L + E ME N
Sbjct: 76 KEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLS 131
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
K ++A +IA G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLA 131
A + S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN--------- 182
+C H+V LLG S +G+ ++I ELM L+ L + E ME N
Sbjct: 70 KEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLS 125
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
K ++A +IA G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 21/164 (12%)
Query: 84 SNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPH 138
S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+ +C H
Sbjct: 24 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN---------KRFEIAI 189
+V LLG S +G+ ++I ELM L+ L + E ME N K ++A
Sbjct: 84 VVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLSKMIQMAG 139
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+IA G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 140 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLA 131
A + S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN--------- 182
+C H+V LLG S +G+ ++I ELM L+ L + E ME N
Sbjct: 76 KEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLS 131
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
K ++A +IA G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 21/164 (12%)
Query: 84 SNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPH 138
S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+ +C H
Sbjct: 24 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 83
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN---------KRFEIAI 189
+V LLG S +G+ ++I ELM L+ L + E ME N K ++A
Sbjct: 84 VVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLSKMIQMAG 139
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+IA G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 140 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 21/164 (12%)
Query: 84 SNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPH 138
S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+ +C H
Sbjct: 21 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 80
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN---------KRFEIAI 189
+V LLG S +G+ ++I ELM L+ L + E ME N K ++A
Sbjct: 81 VVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLSKMIQMAG 136
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+IA G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 137 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 21/164 (12%)
Query: 84 SNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPH 138
S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+ +C H
Sbjct: 30 SRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH 89
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN---------KRFEIAI 189
+V LLG S +G+ ++I ELM L+ L + E ME N K ++A
Sbjct: 90 VVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLSKMIQMAG 145
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+IA G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 146 EIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 36/207 (17%)
Query: 60 SPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSS 115
+PN R ++R LG G FG+VYK + VP P+A+KIL+ +
Sbjct: 26 APNQAQLRILKETELKRVKV-------LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET 78
Query: 116 GSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK- 174
+ EF +E + +S+D PH+V LLG + L+ +LM + L + + + K
Sbjct: 79 TGPKANVEFMDEALIMASMDHPHLVRLLGVC---LSPTIQLVTQLMPHGCLLEYVHEHKD 135
Query: 175 ---CEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGL 231
+ L+ W + IAKG+ YL E ++H D+ N+L+ KI DFGL
Sbjct: 136 NIGSQLLLNW------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGL 186
Query: 232 ARLKTEDLMIEGECVKKRDVNEDNGSI 258
ARL +EG+ +++ N D G +
Sbjct: 187 ARL------LEGD---EKEYNADGGKM 204
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLA 131
A + S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN--------- 182
+C H+V LLG S +G+ ++I ELM L+ L + E ME N
Sbjct: 105 KEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLS 160
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
K ++A +IA G+ YL+ + +H D+ N ++ DF KIGDFG+ R
Sbjct: 161 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 36/207 (17%)
Query: 60 SPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSS 115
+PN R ++R LG G FG+VYK + VP P+A+KIL+ +
Sbjct: 3 APNQAQLRILKETELKRVKV-------LGSGAFGTVYKGIWVPEGETVKIPVAIKILNET 55
Query: 116 GSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK- 174
+ EF +E + +S+D PH+V LLG + L+ +LM + L + + + K
Sbjct: 56 TGPKANVEFMDEALIMASMDHPHLVRLLGVC---LSPTIQLVTQLMPHGCLLEYVHEHKD 112
Query: 175 ---CEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGL 231
+ L+ W + IAKG+ YL E ++H D+ N+L+ KI DFGL
Sbjct: 113 NIGSQLLLNW------CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGL 163
Query: 232 ARLKTEDLMIEGECVKKRDVNEDNGSI 258
ARL +EG+ +++ N D G +
Sbjct: 164 ARL------LEGD---EKEYNADGGKM 181
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLA 131
A + S LG G FG VY+ V +P +A+K ++ + S++ EF NE S+
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN--------- 182
+C H+V LLG S +G+ ++I ELM L+ L + E ME N
Sbjct: 70 KEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPE--MENNPVLAPPSLS 125
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
K ++A +IA G+ YL+ + +H D+ N + DF KIGDFG+ R
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 55 PSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKA----VVPSSSQP-LAV 109
PS + P+ R L+R LG G FG VY+ ++ ++ +AV
Sbjct: 3 PSSVYVPDEWEVSREKITLLRE----------LGQGSFGMVYEGNARDIIKGEAETRVAV 52
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K ++ S SL+ EF NE S+ C H+V LLG S +G+ +++ ELM + L+
Sbjct: 53 KTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--KGQPTLVVMELMAHGDLKSY 110
Query: 170 LLDRKCEE-------LMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDF 222
L + E + ++A +IA G+ YL+ +H D+ N ++ DF
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 167
Query: 223 KAKIGDFGLAR 233
KIGDFG+ R
Sbjct: 168 TVKIGDFGMTR 178
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 55 PSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKA----VVPSSSQP-LAV 109
PS + P+ R L+R LG G FG VY+ ++ ++ +AV
Sbjct: 3 PSSVFVPDEWEVSREKITLLRE----------LGQGSFGMVYEGNARDIIKGEAETRVAV 52
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K ++ S SL+ EF NE S+ C H+V LLG S +G+ +++ ELM + L+
Sbjct: 53 KTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--KGQPTLVVMELMAHGDLKSY 110
Query: 170 LLDRKCEE-------LMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDF 222
L + E + ++A +IA G+ YL+ +H D+ N ++ DF
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 167
Query: 223 KAKIGDFGLAR 233
KIGDFG+ R
Sbjct: 168 TVKIGDFGMTR 178
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 55 PSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKA----VVPSSSQP-LAV 109
PS + P+ R L+R LG G FG VY+ ++ ++ +AV
Sbjct: 3 PSSVFVPDEWEVSREKITLLRE----------LGQGSFGMVYEGNARDIIKGEAETRVAV 52
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K ++ S SL+ EF NE S+ C H+V LLG S +G+ +++ ELM + L+
Sbjct: 53 KTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--KGQPTLVVMELMAHGDLKSY 110
Query: 170 LLDRKCEE-------LMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDF 222
L + E + ++A +IA G+ YL+ +H D+ N ++ DF
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 167
Query: 223 KAKIGDFGLAR 233
KIGDFG+ R
Sbjct: 168 TVKIGDFGMTR 178
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKA----VVPSSSQP-LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG VY+ ++ ++ +AVK ++ S SL+ EF NE S+ C H+V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEE-------LMEWNKRFEIAIDIAKG 194
LLG S +G+ +++ ELM + L+ L + E + ++A +IA G
Sbjct: 84 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 141
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ YL+ +H D+ N ++ DF KIGDFG+ R
Sbjct: 142 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 55 PSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKA----VVPSSSQP-LAV 109
PS + P+ R L+R LG G FG VY+ ++ ++ +AV
Sbjct: 3 PSSVFVPDEWEVSREKITLLRE----------LGQGSFGMVYEGNARDIIKGEAETRVAV 52
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K ++ S SL+ EF NE S+ C H+V LLG S +G+ +++ ELM + L+
Sbjct: 53 KTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--KGQPTLVVMELMAHGDLKSY 110
Query: 170 LLDRKCEE-------LMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDF 222
L + E + ++A +IA G+ YL+ +H D+ N ++ DF
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDF 167
Query: 223 KAKIGDFGLAR 233
KIGDFG+ R
Sbjct: 168 TVKIGDFGMTR 178
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKA----VVPSSSQP-LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG VY+ ++ ++ +AVK ++ S SL+ EF NE S+ C H+V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEE-------LMEWNKRFEIAIDIAKG 194
LLG S +G+ +++ ELM + L+ L + E + ++A +IA G
Sbjct: 82 LLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG 139
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ YL+ +H D+ N ++ DF KIGDFG+ R
Sbjct: 140 MAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 58 LKSPNHNHCRRFSYN-LIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG 116
L++P ++ + L ++ F +LG G +GSVYKA+ + Q +A+K +
Sbjct: 7 LRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES 66
Query: 117 SLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCE 176
LQ E E+S+ D PH+V G S + L ++ E S+ D + R
Sbjct: 67 DLQ---EIIKEISIMQQCDSPHVVKYYG--SYFKNTDLWIVMEYCGAGSVSDII--RLRN 119
Query: 177 ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ + ++ I KGLEYLH + IH DIK NILL+ + AK+ DFG+A
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 55 PSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKA----VVPSSSQP-LAV 109
PS + P+ R L+R LG G FG VY+ ++ ++ +AV
Sbjct: 3 PSSVYVPDEWEVSREKITLLRE----------LGQGSFGMVYEGNARDIIKGEAETRVAV 52
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K ++ S SL+ EF NE S+ C H+V LLG S +G+ +++ ELM + L+
Sbjct: 53 KTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--KGQPTLVVMELMAHGDLKSY 110
Query: 170 LLDRKCEE-------LMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDF 222
L + E + ++A +IA G+ YL+ +H ++ N ++ DF
Sbjct: 111 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDF 167
Query: 223 KAKIGDFGLAR 233
KIGDFG+ R
Sbjct: 168 TVKIGDFGMTR 178
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 27/191 (14%)
Query: 55 PSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKA----VVPSSSQP-LAV 109
PS + P+ R L+R LG G FG VY+ ++ ++ +AV
Sbjct: 4 PSSVYVPDEWEVSREKITLLRE----------LGQGSFGMVYEGNARDIIKGEAETRVAV 53
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K ++ S SL+ EF NE S+ C H+V LLG S +G+ +++ ELM + L+
Sbjct: 54 KTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--KGQPTLVVMELMAHGDLKSY 111
Query: 170 LLDRKCEE-------LMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDF 222
L + E + ++A +IA G+ YL+ +H ++ N ++ DF
Sbjct: 112 LRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDF 168
Query: 223 KAKIGDFGLAR 233
KIGDFG+ R
Sbjct: 169 TVKIGDFGMTR 179
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 86/159 (54%), Gaps = 18/159 (11%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKIL---DSSGS---LQGEREFHNELSLASSLDCPHI 139
++G GGFG V+K + +A+K L DS G ++ +EF E+ + S+L+ P+I
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
V L G + R+V+ E + L LLD+ ++W+ + + +DIA G+EY+
Sbjct: 86 VKLYGLMHNPP--RMVM--EFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 200 HSCEPPVIHGDIKPSNILL-----DGDFKAKIGDFGLAR 233
+ PP++H D++ NI L + AK+ DFGL++
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F+ +R+G G FG VYK + + + +A+KI+D + + E+++ S D P+I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
G S + +L +I E + S D L EE I +I KGL+YLH
Sbjct: 81 RYFG--SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIAT----ILREILKGLDYLHS 134
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ IH DIK +N+LL K+ DFG+A
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 18 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 74
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 75 GYSTKPQ---LAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKS- 128
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA +K+
Sbjct: 129 --IIHRDLKSNNIFLHEDNTVKIGDFGLATVKS 159
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 77 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 68 RFSYNLIRRATASFSPSNRLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGERE 123
R S+N+ + +LG G FGSV Y + ++ + +AVK L S + R+
Sbjct: 17 RGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD 75
Query: 124 FHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK 183
F E+ + SL +IV G R L LI E + SL+D L +K +E ++ K
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK 133
Query: 184 RFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ I KG+EYL IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 134 LLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 185
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 87 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 137
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 138 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 68 RFSYNLIRRATASFSPSNRLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGERE 123
R S+N+ + +LG G FGSV Y + ++ + +AVK L S + R+
Sbjct: 17 RGSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRD 75
Query: 124 FHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK 183
F E+ + SL +IV G R L LI E + SL+D L +K +E ++ K
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIK 133
Query: 184 RFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ I KG+EYL IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 134 LLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 185
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 14 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ +L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 71 GYST---APQLAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA +K+
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 78 PHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 80 PHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 77 PHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 102 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 152
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 153 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE--FHNELSLASSLDCPHIVSLLG 144
LG GGF Y+ + + A K++ S L+ ++ E+++ SLD PH+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL E+ RSL + L ++ + + E R+ + I +G++YLH++
Sbjct: 110 FFEDDDFVYVVL--EICRRRSLLE--LHKRRKAVTEPEARYFMRQTI-QGVQYLHNN--- 161
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D KIGDFGLA
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 79 PHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKIL---DSSGS---LQGEREFHNELSLASSLDCPHI 139
++G GGFG V+K + +A+K L DS G ++ +EF E+ + S+L+ P+I
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
V L G + R+V+ E + L LLD+ ++W+ + + +DIA G+EY+
Sbjct: 86 VKLYGLMHNPP--RMVM--EFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 200 HSCEPPVIHGDIKPSNILL-----DGDFKAKIGDFGLAR 233
+ PP++H D++ NI L + AK+ DFG ++
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 71 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 121
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 122 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 78 PHVCRLLGICLTSTVQ---LIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 128
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 129 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE--FHNELSLASSLDCPHIVSLLG 144
LG GGF Y+ + + A K++ S L+ ++ E+++ SLD PH+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL E+ RSL + L ++ + + E R+ + I +G++YLH++
Sbjct: 110 FFEDDDFVYVVL--EICRRRSLLE--LHKRRKAVTEPEARYFMRQTI-QGVQYLHNN--- 161
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D KIGDFGLA
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE--FHNELSLASSLDCPHIVSLLG 144
LG GGF Y+ + + A K++ S L+ ++ E+++ SLD PH+V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL E+ RSL + L ++ + + E R+ + I +G++YLH++
Sbjct: 94 FFEDDDFVYVVL--EICRRRSLLE--LHKRRKAVTEPEARYFMRQTI-QGVQYLHNN--- 145
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D KIGDFGLA
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE--FHNELSLASSLDCPHIVSLLG 144
LG GGF Y+ + + A K++ S L+ ++ E+++ SLD PH+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL E+ RSL + L ++ + + E R+ + I +G++YLH++
Sbjct: 110 FFEDDDFVYVVL--EICRRRSLLE--LHKRRKAVTEPEARYFMRQTI-QGVQYLHNN--- 161
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D KIGDFGLA
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 84 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 81 PHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 131
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 132 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 170
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 77 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 80 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 83 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 133
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 134 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 172
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 41 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 97
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 98 GYSTKPQ---LAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 151
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA +K+
Sbjct: 152 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 182
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 80 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 42 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 99 GYSTKPQ---LAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 152
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA +K+
Sbjct: 153 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 183
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 80 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 130
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 131 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 79 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 77 PHVCRLLGICLTSTVQ---LITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 14 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 71 GYSTKPQ---LAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA +K+
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKIL---DSSGS---LQGEREFHNELSLASSLDCPHI 139
++G GGFG V+K + +A+K L DS G ++ +EF E+ + S+L+ P+I
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
V L G + R+V+ E + L LLD+ ++W+ + + +DIA G+EY+
Sbjct: 86 VKLYGLMHNPP--RMVM--EFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 200 HSCEPPVIHGDIKPSNILL-----DGDFKAKIGDFGLAR 233
+ PP++H D++ NI L + AK+ DF L++
Sbjct: 140 NQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 19 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 76 GYSTKPQ---LAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 129
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA +K+
Sbjct: 130 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 19 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 75
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 76 GYSTKPQ---LAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 129
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA +K+
Sbjct: 130 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F+ R+G G FG V+K + + Q +A+KI+D + + E+++ S D ++
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAI---DIAKGLEY 197
G S +G +L +I E + S D L +E F+IA +I KGL+Y
Sbjct: 85 KYYG--SYLKGSKLWIIMEYLGGGSALDLLRAGPFDE-------FQIATMLKEILKGLDY 135
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
LH + IH DIK +N+LL K+ DFG+A
Sbjct: 136 LHSEKK---IHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 16 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 72
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 73 GYSTKPQ---LAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 126
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA +K+
Sbjct: 127 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 157
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 30 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ +L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 87 GYST---APQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA K+
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 78
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 170
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 75
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 80
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 138
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 139 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 172
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 73
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 131
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 132 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 165
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 81
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 139
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 140 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 173
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 74
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 132
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 133 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 166
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 82
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 140
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 141 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 174
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 75
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 79
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 137
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 138 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 171
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 30 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 86
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 87 GYSTKPQ---LAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA K+
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 106
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 164
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 165 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 198
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 75
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 134 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 167
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 74 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+G+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 125 EGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+ L + S + +E +E + +S+D
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 111 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 161
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 162 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 200
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 42 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 98
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 99 GYSTKPQ---LAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 152
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA K+
Sbjct: 153 --IIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 183
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 34 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 90
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 91 GYSTKPQ---LAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 144
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA K+
Sbjct: 145 --IIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 175
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F L G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 84 PHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 78
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL++ L +K +E ++ K + I KG+EYL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 170
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 12/153 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLL 143
R+G G FG+VYK +AVK+L+ + + Q + F NE+ + +I+ +
Sbjct: 14 QRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFM 70
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+++ + L ++ + E SL L E E K +IA A+G++YLH
Sbjct: 71 GYSTKPQ---LAIVTQWCEGSSLYHHL--HIIETKFEMIKLIDIARQTAQGMDYLHAKS- 124
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L D KIGDFGLA K+
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 155
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F L G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 77 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F L G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 84 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFGLA+L
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 79 PHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFG A+L
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 20/187 (10%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKIL 112
T P DL S C P LG G +G V K S Q +AVK +
Sbjct: 28 TPPRDLDS---KACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRI 84
Query: 113 DSSGSLQGEREFHNELSLAS-SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALL 171
++ + Q ++ +L ++ ++DCP V+ G A R G ++ ME L D L
Sbjct: 85 RATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG-ALFREGD----VWICME---LMDTSL 136
Query: 172 DRKCEELMEWNKRF------EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAK 225
D+ +++++ + +IA+ I K LE+LH VIH D+KPSN+L++ + K
Sbjct: 137 DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVK 194
Query: 226 IGDFGLA 232
+ DFG++
Sbjct: 195 MCDFGIS 201
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 81 PHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 131
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFG A+L
Sbjct: 132 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 79 PHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFG A+L
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 79 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 129
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFG A+L
Sbjct: 130 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLAS-SLDCPHI 139
P LG G +G V K S Q +AVK + ++ + Q ++ +L ++ ++DCP
Sbjct: 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRF------EIAIDIAK 193
V+ G A R G ++ ME L D LD+ +++++ + +IA+ I K
Sbjct: 69 VTFYG-ALFREGD----VWICME---LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVK 120
Query: 194 GLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDL 239
LE+LH VIH D+KPSN+L++ + K+ DFG++ +D+
Sbjct: 121 ALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 84 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 134
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFG A+L
Sbjct: 135 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 76
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L +K +E ++ K + I KG+EYL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGTK 134
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH ++ NIL++ + + KIGDFGL ++ +D
Sbjct: 135 ---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQD 168
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDC 136
F LG G FG+VYK + +P + P+A+K L + S + +E +E + +S+D
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIA 192
PH+ LLG + LI +LM L D + + K + L+ W + IA
Sbjct: 77 PHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIA 127
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
KG+ YL + ++H D+ N+L+ KI DFG A+L
Sbjct: 128 KGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKL 166
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSS--GSLQGEREFHNE---L 128
I FS +G GGFG VY + + A+K LD QGE NE L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 129 SLASSLDCPHIVSL-LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEI 187
SL S+ DCP IV + F + + L I +LM L L E + RF
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDK---LSFILDLMNGGDLHYHLSQHGV--FSEADMRF-Y 297
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
A +I GLE++H+ V++ D+KP+NILLD +I D GLA
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSS--GSLQGEREFHNE---L 128
I FS +G GGFG VY + + A+K LD QGE NE L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 129 SLASSLDCPHIVSL-LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEI 187
SL S+ DCP IV + F + + L I +LM L L E + RF
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDK---LSFILDLMNGGDLHYHLSQHGV--FSEADMRF-Y 296
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
A +I GLE++H+ V++ D+KP+NILLD +I D GLA
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSS--GSLQGEREFHNE---L 128
I FS +G GGFG VY + + A+K LD QGE NE L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 129 SLASSLDCPHIVSL-LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEI 187
SL S+ DCP IV + F + + L I +LM L L E + RF
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDK---LSFILDLMNGGDLHYHLSQHGV--FSEADMRF-Y 297
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
A +I GLE++H+ V++ D+KP+NILLD +I D GLA
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSS--GSLQGEREFHNE---L 128
I FS +G GGFG VY + + A+K LD QGE NE L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 129 SLASSLDCPHIVSL-LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEI 187
SL S+ DCP IV + F + + L I +LM L L E + RF
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDK---LSFILDLMNGGDLHYHLSQHGV--FSEADMRF-Y 297
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
A +I GLE++H+ V++ D+KP+NILLD +I D GLA
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 60 SPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAV-VPSSSQ---PLAVKILDSS 115
+PN R +R+ LG G FG+VYK + +P P+A+K+L +
Sbjct: 5 APNQALLRILKETELRKVKV-------LGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN 57
Query: 116 GSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK- 174
S + +E +E + + + P++ LLG + L+ +LM L D + + +
Sbjct: 58 TSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ---LVTQLMPYGCLLDHVRENRG 114
Query: 175 ---CEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGL 231
++L+ W + IAKG+ YL + ++H D+ N+L+ KI DFGL
Sbjct: 115 RLGSQDLLNW------CMQIAKGMSYLE---DVRLVHRDLAARNVLVKSPNHVKITDFGL 165
Query: 232 ARLKTED 238
ARL D
Sbjct: 166 ARLLDID 172
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F+ ++G G FG V+K + + + +A+KI+D + + E+++ S D P++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
G S + +L +I E + S D L +E + I +I KGL+YLH
Sbjct: 69 KYYG--SYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHS 122
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ IH DIK +N+LL + K+ DFG+A
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLD 135
AT+ + P +G G +G+VYKA P S +A+K + +G E++L L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 136 C---PHIVSLLGFASDRRGRRLVLIYELMENRSLQD--ALLDRKCEELMEWNKRFEIAID 190
P++V L+ + R R + + + E+ QD LD+ + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECV 246
+GL++LH +C ++H D+KP NIL+ K+ DFGLAR+ + + ++ V
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVV 173
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 78/157 (49%), Gaps = 10/157 (6%)
Query: 86 RLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+LG G FGSV Y + ++ + +AVK L S + R+F E+ + SL +IV
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK 78
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
G R L LI E + SL+D L + E ++ K + I KG+EYL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ NIL++ + + KIGDFGL ++ +D
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQD 170
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F+ ++G G FG V+K + + + +A+KI+D + + E+++ S D P++
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
G S + +L +I E + S D L +E + I +I KGL+YLH
Sbjct: 69 KYYG--SYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHS 122
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ IH DIK +N+LL + K+ DFG+A
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F+ ++G G FG V+K + + + +A+KI+D + + E+++ S D P++
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
G S + +L +I E + S D L +E + I +I KGL+YLH
Sbjct: 84 KYYG--SYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHS 137
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ IH DIK +N+LL + K+ DFG+A
Sbjct: 138 EKK---IHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F+ ++G G FG V+K + + + +A+KI+D + + E+++ S D P++
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
G S + +L +I E + S D L +E + I +I KGL+YLH
Sbjct: 89 KYYG--SYLKDTKLWIIMEYLGGGSALDLLEPGPLDE----TQIATILREILKGLDYLHS 142
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ IH DIK +N+LL + K+ DFG+A
Sbjct: 143 EKK---IHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLD 135
AT+ + P +G G +G+VYKA P S +A+K + +G E++L L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 136 C---PHIVSLLGFASDRRGRRLVLIYELMENRSLQD--ALLDRKCEELMEWNKRFEIAID 190
P++V L+ + R R + + + E+ QD LD+ + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECV 246
+GL++LH +C ++H D+KP NIL+ K+ DFGLAR+ + + + V
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 10/171 (5%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLD 135
AT+ + P +G G +G+VYKA P S +A+K + +G E++L L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 136 C---PHIVSLLGFASDRRGRRLVLIYELMENRSLQD--ALLDRKCEELMEWNKRFEIAID 190
P++V L+ + R R + + + E+ QD LD+ + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMI 241
+GL++LH +C ++H D+KP NIL+ K+ DFGLAR+ + + +
Sbjct: 121 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL 168
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 80/175 (45%), Gaps = 25/175 (14%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG------------EREFHNE 127
S+ +LG G +G V + A+K++ S +G E +NE
Sbjct: 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 128 LSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDR-KCEELMEWNKRFE 186
+SL SLD P+I+ L D+ + L+ E E L + +++R K +E N
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDK--KYFYLVTEFYEGGELFEQIINRHKFDECDAAN---- 150
Query: 187 IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGD---FKAKIGDFGLARLKTED 238
I I G+ YLH + ++H DIKP NILL+ KI DFGL+ ++D
Sbjct: 151 IMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE +EKCDV+S GV++ +L+ G P
Sbjct: 210 GTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCGYPPF 247
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V A ++ Q +A+KI++ + +QG E E+S L PHI+ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
+ ++++ E N L D ++ R E + F+ I +EY H
Sbjct: 80 YDVIKSKD--EIIMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRH- 132
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGEC 245
++H D+KP N+LLD KI DFGL+ + T+ ++ C
Sbjct: 133 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 173
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V A ++ Q +A+KI++ + +QG E E+S L PHI+ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
+ ++++ E N L D ++ R E + F+ I +EY H
Sbjct: 79 YDVIKSKD--EIIMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRH- 131
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGEC 245
++H D+KP N+LLD KI DFGL+ + T+ ++ C
Sbjct: 132 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 172
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V A ++ Q +A+KI++ + +QG E E+S L PHI+ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
+ ++++ E N L D ++ R E + F+ I +EY H
Sbjct: 70 YDVIKSKD--EIIMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRH- 122
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGEC 245
++H D+KP N+LLD KI DFGL+ + T+ ++ C
Sbjct: 123 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 163
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 19/172 (11%)
Query: 83 PSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLAS-SLDCPHIVS 141
P LG G +G V K S Q AVK + ++ + Q ++ +L ++ ++DCP V+
Sbjct: 38 PIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVT 97
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRF------EIAIDIAKGL 195
G A R G + L D LD+ +++++ + +IA+ I K L
Sbjct: 98 FYG-ALFREGDVWIC-------XELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKAL 149
Query: 196 EYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM--IEGEC 245
E+LH VIH D+KPSN+L++ + K DFG++ +D+ I+ C
Sbjct: 150 EHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGC 199
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLLG 144
LG GGF ++ + + A KI+ S L+ + + E+S+ SL H+V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL EL RSL + L ++ + L E R+ + I G +YLH +
Sbjct: 83 FFEDNDFVFVVL--ELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN--- 134
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D + KIGDFGLA
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V A ++ Q +A+KI++ + +QG E E+S L PHI+ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
+ ++++ E N L D ++ R E + F+ I +EY H
Sbjct: 74 YDVIKSKD--EIIMVIEYAGNE-LFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRH- 126
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGEC 245
++H D+KP N+LLD KI DFGL+ + T+ ++ C
Sbjct: 127 --KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC 167
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLLG 144
LG GGF ++ + + A KI+ S L+ + + E+S+ SL H+V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL EL RSL + L ++ + L E R+ + I G +YLH +
Sbjct: 85 FFEDNDFVFVVL--ELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN--- 136
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D + KIGDFGLA
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLLG 144
LG GGF ++ + + A KI+ S L+ + + E+S+ SL H+V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL EL RSL + L ++ + L E R+ + I G +YLH +
Sbjct: 89 FFEDNDFVFVVL--ELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN--- 140
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D + KIGDFGLA
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 168
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLLG 144
LG GGF ++ + + A KI+ S L+ + + E+S+ SL H+V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL EL RSL + L ++ + L E R+ + I G +YLH +
Sbjct: 107 FFEDNDFVFVVL--ELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN--- 158
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D + KIGDFGLA
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLLG 144
LG GGF ++ + + A KI+ S L+ + + E+S+ SL H+V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL EL RSL + L ++ + L E R+ + I G +YLH +
Sbjct: 85 FFEDNDFVFVVL--ELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN--- 136
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D + KIGDFGLA
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 164
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLLG 144
LG GGF ++ + + A KI+ S L+ + + E+S+ SL H+V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F D +VL EL RSL + L ++ + L E R+ + I G +YLH +
Sbjct: 109 FFEDNDFVFVVL--ELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN--- 160
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+K N+ L+ D + KIGDFGLA
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH----NELSLAS 132
AT+ + P +G G +G+VYKA P S +A+K + G E++L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 133 SLDC---PHIVSLLGFASDRRGRRLVLIYELMENRSLQD--ALLDRKCEELMEWNKRFEI 187
L+ P++V L+ + R R + + + E+ QD LD+ + ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDL 125
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECV 246
+GL++LH +C ++H D+KP NIL+ K+ DFGLAR+ + + + V
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVV 181
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 10/153 (6%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S R+G G FG+VYK +K++D + + + F NE+++ +I+ +
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTP--EQFQAFRNEVAVLRKTRHVNILLFM 98
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G+ + L ++ + E SL L E + + +IA A+G++YLH
Sbjct: 99 GYMTKDN---LAIVTQWCEGSSLYKHL--HVQETKFQMFQLIDIARQTAQGMDYLH---A 150
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
+IH D+K +NI L KIGDFGLA +K+
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G FG VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 74
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R +I E M +L D L R+C + + +A I+ +EYL +
Sbjct: 75 VCT--REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---K 127
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVK-ILDS-SGSLQGEREFHNELSLAS 132
R + +LG G +G V+K++ + + +AVK I D+ S +R F + L
Sbjct: 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTE 64
Query: 133 SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA 192
+IV+LL R + L+++ ME D + L +K++ + +
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYME----TDLHAVIRANILEPVHKQY-VVYQLI 119
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
K ++YLH ++H D+KPSNILL+ + K+ DFGL+R
Sbjct: 120 KVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 106 PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRS 165
P+A+K L + + + R+F +E S+ D P+I+ L G + RGR +++ E MEN S
Sbjct: 79 PVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGS 136
Query: 166 LQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAK 225
L L R + + + + G+ YL + +H D+ N+L+D + K
Sbjct: 137 LDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCK 191
Query: 226 IGDFGLARLKTED 238
+ DFGL+R+ +D
Sbjct: 192 VSDFGLSRVLEDD 204
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Query: 106 PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRS 165
P+A+K L + + + R+F +E S+ D P+I+ L G + RGR +++ E MEN S
Sbjct: 79 PVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT--RGRLAMIVTEYMENGS 136
Query: 166 LQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAK 225
L L R + + + + G+ YL + +H D+ N+L+D + K
Sbjct: 137 LDTFL--RTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCK 191
Query: 226 IGDFGLARLKTED 238
+ DFGL+R+ +D
Sbjct: 192 VSDFGLSRVLEDD 204
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 14/156 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE-FHNELSLASSLDCPHIVSLL-G 144
+G G F +VYK + ++ +A L + ER+ F E L P+IV
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 145 FASDRRGRR-LVLIYELMENRSLQDALLDRKCEE---LMEWNKRFEIAIDIAKGLEYLHH 200
+ S +G++ +VL+ EL + +L+ L K + L W ++ I KGL++LH
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFLHT 147
Query: 201 SCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARLK 235
PP+IH D+K NI + G KIGD GLA LK
Sbjct: 148 RT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 123 EFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN 182
+ + E+++ LD P++V L+ D L +++EL+ + + + L E
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---PTLKPLSEDQ 138
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
RF D+ KG+EYLH+ +IH DIKPSN+L+ D KI DFG++
Sbjct: 139 ARFYFQ-DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 113 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 165
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGLAR+ +D
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD 200
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 77
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 78 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLEKK- 131
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 132 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S L+ +IV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 99 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 87 LGHGGFGSVYKA----VVPSSSQPL-AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG V+ A + P+ + L AVK L +L ++F E L ++L HIV
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNLQHEHIVK 81
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQ--------DALL-----DRKCEELMEWNKRFEIA 188
G D G L++++E M++ L DA++ R+ + + ++ IA
Sbjct: 82 FYGVCGD--GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 189 IDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IA G+ YL +H D+ N L+ + KIGDFG++R
Sbjct: 140 SQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 82 VCT--REPPFYIIIEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + + +A+K L + + R+F E S+ D P++V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + RG+ ++++ E MEN +L DA L RK + + + IA G+ YL +
Sbjct: 111 GVVT--RGKPVMIVIEFMENGAL-DAFL-RKHDGQFTVIQLVGMLRGIAAGMRYL---AD 163
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD 198
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 78
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 79 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 130
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 16/153 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLAS-SLDCPHIVSLLGF 145
+G G +GSV K V S Q +AVK + S+ + +++ +L + S DCP+IV G
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG- 88
Query: 146 ASDRRGRRLVLIYELMEN------RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
A R G + + ELM + + L D EE++ +I + K L +L
Sbjct: 89 ALFREGDCWICM-ELMSTSFDKFYKYVYSVLDDVIPEEILG-----KITLATVKALNHLK 142
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ + +IH DIKPSNILLD K+ DFG++
Sbjct: 143 ENLK--IIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 20 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 77
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 78 VCT--REPPFYIIIEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLEKK- 131
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 132 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 165
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 77 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 128
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 78
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 79 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 130
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 74/159 (46%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S L+ +IV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 113 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 32 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 89
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 90 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 141
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 177
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 82 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLEKK- 135
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 136 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 82 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 21 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 78
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 79 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLEKK- 132
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 133 --NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 82 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R +I E M +L D L R+C + + +A I+ +EYL +
Sbjct: 77 VCT--REPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---K 129
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 23 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 80
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 81 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 132
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 168
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R +I E M +L D L R+C + + +A I+ +EYL +
Sbjct: 77 VCT--REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---K 129
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 77 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 128
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R +I E M +L D L R+C + + +A I+ +EYL +
Sbjct: 77 VCT--REPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---K 129
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 24 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 81
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R +I E M +L D L R+C + + +A I+ +EYL +
Sbjct: 82 VCT--REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---K 134
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 135 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 74
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R +I E M +L D L R+C + + +A I+ +EYL +
Sbjct: 75 VCT--REPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---K 127
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 74
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R +I E M +L D L R+C + + +A I+ +EYL +
Sbjct: 75 VCT--REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---K 127
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 28 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 84
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 85 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 137
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARL 166
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 19 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 76
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R +I E M +L D L R+C + + +A I+ +EYL +
Sbjct: 77 VCT--REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---K 129
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 84 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLS---D 136
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 79/175 (45%), Gaps = 15/175 (8%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH----NELSL 130
+R + LG G FG V A + Q +A+K + S L + + H E+S
Sbjct: 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFI--SRQLLKKSDMHMRVEREISY 62
Query: 131 ASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAID 190
L PHI+ L + +V+ Y E L D ++++K E + F+
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEYAGGE---LFDYIVEKKRMTEDEGRRFFQ---Q 116
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGEC 245
I +EY H ++H D+KP N+LLD + KI DFGL+ + T+ ++ C
Sbjct: 117 IICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 101 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLS---D 153
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 188
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 30 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 86
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 87 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 139
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARL 168
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 79 ASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKIL------DSSGSLQGEREFHNELSLAS 132
A + +G GGFG VY+A +AVK D S +++ R+ E L +
Sbjct: 7 AELTLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQ---EAKLFA 61
Query: 133 SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC--EELMEWNKRFEIAID 190
L P+I++L G + L L+ E L L ++ + L+ W A+
Sbjct: 62 MLKHPNIIALRGVC--LKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQ 113
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILL-----DGDFK---AKIGDFGLAR 233
IA+G+ YLH P+IH D+K SNIL+ +GD KI DFGLAR
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
S G ++APE + S+ DV+S+GVL+ L++G P +
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 82
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 83 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 135
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARL 164
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 26 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 82
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 83 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 135
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARL 164
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 113 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 165
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 125 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 182
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 183 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHI 139
+ S + LG G FG V+K ++ LA KI+ + G ++ + E NE+S+ + LD ++
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANL 148
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
+ L + + +VL+ E ++ L D ++D + L E + + I +G+ ++H
Sbjct: 149 IQL--YDAFESKNDIVLVMEYVDGGELFDRIID-ESYNLTELDTILFMK-QICEGIRHMH 204
Query: 200 HSCEPPVIHGDIKPSNIL-LDGDFK-AKIGDFGLAR 233
++H D+KP NIL ++ D K KI DFGLAR
Sbjct: 205 QMY---ILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 111 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 163
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 84 GVVT--KSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYLS---D 136
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 113 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 165
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 113 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 165
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 113 GVVT--KSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 165
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 11/156 (7%)
Query: 87 LGHGGFGSVYKAVVPSSS----QPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
+G G FG VYK ++ +SS P+A+K L + + + +F E + +I+ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
G S + + +++I E MEN +L L ++ E + + IA G++YL +
Sbjct: 112 EGVIS--KYKPMMIITEYMENGALDKFLREKDGE--FSVLQLVGMLRGIAAGMKYLANMN 167
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 168 ---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 21/154 (13%)
Query: 90 GGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDR 149
G FG V+KA + ++ +AVKI +Q ++ + NE + S H L +++
Sbjct: 35 GRFGCVWKAQL--LNEYVAVKIF----PIQDKQSWQNEYEVYSLPGMKHENILQFIGAEK 88
Query: 150 RGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC--- 202
RG L LI E SL D L ++ WN+ IA +A+GL YLH
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFLK----ANVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 203 ----EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+P + H DIK N+LL + A I DFGLA
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 25 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 81
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 82 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 134
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLARL 163
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 113 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 165
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 115 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 172
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 173 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 85 NRLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
++LG G FGSV Y + ++ +AVK L SG Q +R+F E+ + +L IV
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILKALHSDFIV 75
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL-H 199
G + + L L+ E + + L+D L + ++ ++ + I KG+EYL
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGS 133
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
C +H D+ NIL++ + KI DFGLA+L D
Sbjct: 134 RRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLD 168
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 77 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 129
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 21 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 77
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 78 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIE---ERN 130
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARL 159
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 113 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 165
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 85 NRLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
++LG G FGSV Y + ++ +AVK L SG Q +R+F E+ + +L IV
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILKALHSDFIV 74
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL-H 199
G + + L L+ E + + L+D L + ++ ++ + I KG+EYL
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGS 132
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
C +H D+ NIL++ + KI DFGLA+L D
Sbjct: 133 RRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLD 167
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 139 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 196
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 197 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 22 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 78
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 79 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 131
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARL 160
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 81 FSPSNR-----LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLD 135
F PS+ LG G FG K + + + +K L + +R F E+ + L+
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDE-ETQRTFLKEVKVMRCLE 65
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGL 195
P+++ +G + +RL I E ++ +L+ + + + W++R A DIA G+
Sbjct: 66 HPNVLKFIGVLY--KDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASGM 121
Query: 196 EYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
YLH +IH D+ N L+ + + DFGLARL ++
Sbjct: 122 AYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASP 507
++ G ++APE G EK DV+SFG+ +L I GR V A P
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGI-VLCEIIGR----VNADP 223
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 116 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 173
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 174 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 77 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIE---ERN 129
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 105 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 162
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 163 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 85 NRLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
++LG G FGSV Y + ++ +AVK L SG Q +R+F E+ + +L IV
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILKALHSDFIV 87
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL-H 199
G + + L L+ E + + L+D L + ++ ++ + I KG+EYL
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGS 145
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
C +H D+ NIL++ + KI DFGLA+L D
Sbjct: 146 RRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLD 180
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 113 GVVT--KSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 165
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 29 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 85
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 86 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 138
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARL 167
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 99 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 20 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 77 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLTI-NKLLDMAAQIAEGMAFIE---ERN 129
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 98 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +PS + +A+K L + + R+F E S+ D P+I+ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L RK + + + IA G++YL +
Sbjct: 113 GVVT--KSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQLVGMLRGIASGMKYL---SD 165
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL R+ +D
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 90 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 147
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 148 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 90 GGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDR 149
G FG V+KA + + +AVKI LQ ++ + +E + S+ H L A+++
Sbjct: 26 GRFGCVWKAQLMNDF--VAVKIF----PLQDKQSWQSEREIFSTPGMKHENLLQFIAAEK 79
Query: 150 RGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC------- 202
RG L + L+ + +L D ++ WN+ +A +++GL YLH
Sbjct: 80 RGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 203 -EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+P + H D K N+LL D A + DFGLA
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 15 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 71
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 72 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 124
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARL 153
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 223 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 280
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 281 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 332
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH ++ N L+ + K+ DFGL+RL T D
Sbjct: 333 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 368
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 113 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 50 RNRTAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVY--KAVVPSSSQ-P 106
R P + PN R F+ + + +G G FG V + VP +
Sbjct: 4 RTFVDPFTFEDPNQ-AVREFAKEI---DASCIKIEKVIGVGEFGEVCSGRLKVPGKREIC 59
Query: 107 LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSL 166
+A+K L + + + R+F +E S+ D P+I+ L G + + + +++I E MEN SL
Sbjct: 60 VAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVT--KCKPVMIITEYMENGSL 117
Query: 167 QDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKI 226
DA L RK + + + I G++YL + +H D+ NIL++ + K+
Sbjct: 118 -DAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKV 172
Query: 227 GDFGLARLKTED 238
DFG++R+ +D
Sbjct: 173 SDFGMSRVLEDD 184
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 85 NRLGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
++LG G FGSV Y + ++ +AVK L SG Q +R+F E+ + +L IV
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ-QRDFQREIQILKALHSDFIV 71
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL-H 199
G + L L+ E + + L+D L + ++ ++ + I KG+EYL
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR--LDASRLLLYSSQICKGMEYLGS 129
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
C +H D+ NIL++ + KI DFGLA+L D
Sbjct: 130 RRC----VHRDLAARNILVESEAHVKIADFGLAKLLPLD 164
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 135
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 136 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 170
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 182 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 227
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 87 LGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V Y + + +AVK L Q + E+ + +L HIV
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
G D+ + + L+ E + SL+D L R C L + A I +G+ YLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRD-YLPRHCVGLAQL---LLFAQQICEGMAYLHAQ- 131
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH + N+LLD D KIGDFGLA+
Sbjct: 132 --HYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 87 LGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V Y + + +AVK L Q + E+ + +L HIV
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
G D+ + + L+ E + SL+D L R C L + A I +G+ YLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRD-YLPRHCVGLAQL---LLFAQQICEGMAYLHAQ- 130
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH + N+LLD D KIGDFGLA+
Sbjct: 131 --HYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + VP + +A+K L + + + R+F +E S+ D P+I+ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + +++I E MEN SL DA L RK + + + I G++YL +
Sbjct: 82 GVVT--KCKPVMIITEYMENGSL-DAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLS---D 134
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFG++R+ +D
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 169
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 87 LGHGGFGSVYKAVVPSSSQPL--AVKILDSSGSLQGEREFHNELSLASSL-DCPHIVSLL 143
+G G FG V KA + + A+K + S R+F EL + L P+I++LL
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEEL-------------MEWNKRFEIAID 190
G A + RG L L E + +L D L + E + + A D
Sbjct: 93 G-ACEHRGY-LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G++YL + IH D+ NIL+ ++ AKI DFGL+R
Sbjct: 151 VARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R +++ ELM L+ L + + + +A DIA G +Y
Sbjct: 113 CIGVSLQSLPRFILM--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 171 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R +++ ELM L+ L + + + +A DIA G +Y
Sbjct: 98 CIGVSLQSLPRFILM--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+AR
Sbjct: 156 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 144
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 145 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 179
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 191 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 236
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 144
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 145 NALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFG 179
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 236
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 87 LGHGGFGSVYKAV-VP---SSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG+V+K V +P S P+ +K+++ Q + + + SLD HIV L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIAKGLEYL 198
LG G L L+ + + SL D + + + L+ W + IAKG+ YL
Sbjct: 99 LGLCP---GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYL 149
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
E ++H ++ N+LL + ++ DFG+A L D
Sbjct: 150 E---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 186
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 87 LGHGGFGSVYKAV-VP---SSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG+V+K V +P S P+ +K+++ Q + + + SLD HIV L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRK----CEELMEWNKRFEIAIDIAKGLEYL 198
LG G L L+ + + SL D + + + L+ W + IAKG+ YL
Sbjct: 81 LGLCP---GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG------VQIAKGMYYL 131
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
E ++H ++ N+LL + ++ DFG+A L D
Sbjct: 132 E---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 87 LGHGGFGSVYKAVVPSSSQPL--AVKILDSSGSLQGEREFHNELSLASSL-DCPHIVSLL 143
+G G FG V KA + + A+K + S R+F EL + L P+I++LL
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEEL-------------MEWNKRFEIAID 190
G A + RG L L E + +L D L + E + + A D
Sbjct: 83 G-ACEHRGY-LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G++YL + IH D+ NIL+ ++ AKI DFGL+R
Sbjct: 141 VARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 265 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 322
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK--RFEIAIDIAKGLEYLHHSC 202
+ R +I E M +L D L R+C E N +A I+ +EYL
Sbjct: 323 VCT--REPPFYIITEFMTYGNLLDYL--RECNR-QEVNAVVLLYMATQISSAMEYLE--- 374
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+ IH ++ N L+ + K+ DFGL+RL T D
Sbjct: 375 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 410
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + VP + +A+K L + + + R+F +E S+ D P+I+ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + +++I E MEN SL DA L RK + + + I G++YL +
Sbjct: 76 GVVT--KCKPVMIITEYMENGSL-DAFL-RKNDGRFTVIQLVGMLRGIGSGMKYLS---D 128
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFG++R+ +D
Sbjct: 129 MSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 163
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVY--KAVVPSSSQ-PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + +P + P+A+K L + + R+F E S+ D P+I+ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + + ++++ E MEN SL L +K + + + I+ G++YL +
Sbjct: 90 GVVT--KSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQLVGMLRGISAGMKYLS---D 142
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R+ +D
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 123
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G EK D++S GVL + G+ P +
Sbjct: 170 TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 120
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 121 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 155
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY+ V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 226 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 283
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R +I E M +L D L R+C + + +A I+ +EYL +
Sbjct: 284 VCT--REPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---K 336
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH ++ N L+ + K+ DFGL+RL T D
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 119
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 166 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 119
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A +S LA+K+L + + E + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 118
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 119 NALSYCHSK---KVIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 21/162 (12%)
Query: 87 LGHGGFGSVYKA----VVPSSSQPL-AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG V+ A + P + L AVK L + S ++FH E L ++L HIV
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVK 79
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQ--------DALLDRKCEELMEW--NKRFEIAIDI 191
G + G L++++E M++ L DA+L + E ++ IA I
Sbjct: 80 FYGVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 192 AKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A G+ YL +H D+ N L+ + KIGDFG++R
Sbjct: 138 AAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 121
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 123
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 118
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 118
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 87 LGHGGFGSVYKAVVPS--SSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
+G G FG V++A P +P +AVK+L S + +F E +L + D P+IV
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEEL---------------------ME 180
LLG + G+ + L++E M L + L + +
Sbjct: 115 LLGVCA--VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLS 172
Query: 181 WNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
++ IA +A G+ YL E +H D+ N L+ + KI DFGL+R
Sbjct: 173 CAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 119
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 120 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 166 TLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 67/155 (43%), Gaps = 11/155 (7%)
Query: 87 LGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V Y + + +AVK L + Q + E+ + +L HI+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
G D L L+ E + SL+D L + + A I +G+ YLH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ- 153
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
IH D+ N+LLD D KIGDFGLA+ E
Sbjct: 154 --HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 121
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 123
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 124 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 118
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 165 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 118
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 121
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 77/153 (50%), Gaps = 11/153 (7%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVK-ILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++G G +G V+K + Q +A+K L+S ++ E+ + L P++V+LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH-HSCE 203
RR RRL L++E ++ L + LDR + E + I + + + H H+C
Sbjct: 70 VF--RRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVK-SITWQTLQAVNFCHKHNC- 123
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
IH D+KP NIL+ K+ DFG ARL T
Sbjct: 124 ---IHRDVKPENILITKHSVIKLCDFGFARLLT 153
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 121
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 168 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 87 LGHGGFGSVYKAVV---PSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LGHG FG VY+ V P+ PL AVK L S Q E +F E + S + +IV
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC----EELMEWNKRFEIAIDIAKGLEY 197
+G + R ++L ELM L+ L + + + +A DIA G +Y
Sbjct: 99 CIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLAR 233
L E IH DI N LL AKIGDFG+A+
Sbjct: 157 LE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 117
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 118 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 152
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 164 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL------DSSGSLQGEREFHNELSLASSLDCPHIV 140
LG GG V+ A + +AVK+L D S L+ RE N A++L+ P IV
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQN----AAALNHPAIV 75
Query: 141 SLL--GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
++ G A G ++ E ++ +L+D + E M + E+ D + L +
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFS 132
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H + +IH D+KP+NIL+ K+ DFG+AR
Sbjct: 133 HQNG---IIHRDVKPANILISATNAVKVVDFGIAR 164
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 455 ISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
+ T ++ GT Y++PE G + + DVYS G ++ +++G P
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE-FHNELSLASSLDCPHIVSLLGF 145
+G G +G K S + L K LD + E++ +E++L L P+IV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRF--EIAIDIAKGLEYLHHSCE 203
DR L ++ E E L +++ + +E ++ F + + L+ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 204 --PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
V+H D+KP+N+ LDG K+GDFGLAR+ D
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE-FHNELSLASSLDCPHIVSLLGF 145
+G G +G K S + L K LD + E++ +E++L L P+IV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRF--EIAIDIAKGLEYLHHSCE 203
DR L ++ E E L +++ + +E ++ F + + L+ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 204 --PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
V+H D+KP+N+ LDG K+GDFGLAR+ D
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE-FHNELSLASSLDCPHIVSLLGF 145
+G G +G K S + L K LD + E++ +E++L L P+IV
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRF--EIAIDIAKGLEYLHHSCE 203
DR L ++ E E L +++ + +E ++ F + + L+ H +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 204 --PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
V+H D+KP+N+ LDG K+GDFGLAR+ D
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 118
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 122
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 123 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 157
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 214
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
P+I+ L G+ D R+ LI E + L +K + E I ++A
Sbjct: 71 RHPNILRLYGYFHD--ATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYIT-ELANA 125
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 170 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 118
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 118
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 119 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 165 ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 210
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 87 LGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V Y + + +AVK L + Q + E+ + +L HI+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
G D+ + L L+ E + SL+D L + + A I +G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHSQ- 136
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
IH ++ N+LLD D KIGDFGLA+ E
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
P+I+ L G+ D R+ LI E + L +K + E I ++A
Sbjct: 71 RHPNILRLYGYFHD--ATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYIT-ELANA 125
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 126 LSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 158
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 461 MRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
+ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 171 LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 215
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSLDCPH 138
F N LG G F VY+A + +A+K++D + + NE+ + L P
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
I+ L + D LVL E+ N + L +R + N+ I G+ YL
Sbjct: 73 ILELYNYFEDSNYVYLVL--EMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYL 128
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
H ++H D+ SN+LL + KI DFGLA
Sbjct: 129 H---SHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 16 RLGAGQFGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 72
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 73 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 125
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH +++ +NIL+ KI DFGLARL
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARL 154
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSLDCPH 138
F LG G FG+VY A S LA+K+L + + E + E+ + S L P+
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
I+ L G+ D L+L Y + + L R E+ + ++A L Y
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ-----RTATYITELANALSYC 128
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
H VIH DIKP N+LL + + KI DFG
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFG 157
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
++ GT+ Y+ PE G + EK D++S GVL + G P +
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 11/155 (7%)
Query: 87 LGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V Y + + +AVK L + Q + E+ + +L HI+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
G D+ + L L+ E + SL+D L + + A I +G+ YLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ- 136
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
IH ++ N+LLD D KIGDFGLA+ E
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A Q +AVK L SL R + EL L L +++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 146 ----ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
S + L+ LM L + + KC+ L + + +F + + +GL+Y+H +
Sbjct: 88 FTPATSIEDFSEVYLVTTLM-GADLNNIV---KCQALSDEHVQF-LVYQLLRGLKYIHSA 142
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDL 239
+IH D+KPSN+ ++ D + +I DFGLAR E++
Sbjct: 143 G---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEM 177
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 121
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL------DSSGSLQGEREFHNELSLASSLDCPHIV 140
LG GG V+ A + +AVK+L D S L+ RE N A++L+ P IV
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQN----AAALNHPAIV 75
Query: 141 SLL--GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
++ G A G ++ E ++ +L+D + E M + E+ D + L +
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFS 132
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H + +IH D+KP+NI++ K+ DFG+AR
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 164
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 455 ISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ T ++ GT Y++PE G + + DVYS G ++ +++G P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL------DSSGSLQGEREFHNELSLASSLDCPHIV 140
LG GG V+ A + +AVK+L D S L+ RE N A++L+ P IV
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQN----AAALNHPAIV 75
Query: 141 SLL--GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
++ G A G ++ E ++ +L+D + E M + E+ D + L +
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFS 132
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H + +IH D+KP+NI++ K+ DFG+AR
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 164
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 455 ISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ T ++ GT Y++PE G + + DVYS G ++ +++G P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSLDCPH 138
F LG G FG+VY A S LA+K+L + + E + E+ + S L P+
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
I+ L G+ D L+L Y + + L R E+ + ++A L Y
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ-----RTATYITELANALSYC 128
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
H VIH DIKP N+LL + + KI DFG
Sbjct: 129 H---SKRVIHRDIKPENLLLGSNGELKIADFG 157
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
++ GT+ Y+ PE G + EK D++S GVL + G P +
Sbjct: 169 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVYKA--VVPSSSQP-LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V +P + +A+K L S + + R+F +E S+ D P+++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + +++I E MEN SL L R+ + + + IA G++YL +
Sbjct: 101 GVVT--KSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL---AD 153
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R +D
Sbjct: 154 MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 100 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 154
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 155 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 189
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 87 LGHGGFGSVYKAVVPSSSQPL--AVKILDSSGSLQGEREFHNELSLASSL-DCPHIVSLL 143
+G G FG V KA + + A+K + S R+F EL + L P+I++LL
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEEL-------------MEWNKRFEIAID 190
G A + RG L L E + +L D L + E + + A D
Sbjct: 90 G-ACEHRGY-LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G++YL + IH ++ NIL+ ++ AKI DFGL+R
Sbjct: 148 VARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A Q +AVK L SL R + EL L L +++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 146 ----ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
S + L+ LM L + + KC+ L + + +F + + +GL+Y+H +
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIV---KCQALSDEHVQF-LVYQLLRGLKYIHSA 150
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDL 239
+IH D+KPSN+ ++ D + +I DFGLAR E++
Sbjct: 151 G---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM 185
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 150
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 151 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 185
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 109 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 163
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 164 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 198
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 164
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 165 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 199
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 140
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 141 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 175
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 140
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 141 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 175
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 164
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 165 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 199
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 77 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 129
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 130 --IIHRDLKPENILLNEDMHIQITDFGTAKV 158
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 78 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 130
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 131 --IIHRDLKPENILLNEDMHIQITDFGTAKV 159
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 75 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 127
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 128 --IIHRDLKPENILLNEDMHIQITDFGTAKV 156
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 149
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 150 ---DIIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEM 184
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 27/167 (16%)
Query: 87 LGHGGFGSVYKAVV--PS---SSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG FG VYK + P+ +Q +A+K L EF +E L + L P++V
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALL-------------DRKCEELMEWNKRFEIA 188
LLG + + + L +I+ + L + L+ DR + +E +
Sbjct: 94 LLGVVT--KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 189 IDIAKGLEYL--HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IA G+EYL HH V+H D+ N+L+ KI D GL R
Sbjct: 152 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFR 193
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 120
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI +FG
Sbjct: 121 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG 155
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 167 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 76 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 128
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 129 --IIHRDLKPENILLNEDMHIQITDFGTAKV 157
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 73/167 (43%), Gaps = 27/167 (16%)
Query: 87 LGHGGFGSVYKAVV--PS---SSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG FG VYK + P+ +Q +A+K L EF +E L + L P++V
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALL-------------DRKCEELMEWNKRFEIA 188
LLG + + + L +I+ + L + L+ DR + +E +
Sbjct: 77 LLGVVT--KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 189 IDIAKGLEYL--HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IA G+EYL HH V+H D+ N+L+ KI D GL R
Sbjct: 135 AQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL------DSSGSLQGEREFHNELSLASSLDCPHIV 140
LG GG V+ A + +AVK+L D S L+ RE N A++L+ P IV
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQN----AAALNHPAIV 75
Query: 141 SLL--GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
++ G A G ++ E ++ +L+D + E M + E+ D + L +
Sbjct: 76 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFS 132
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H + +IH D+KP+NI++ K+ DFG+AR
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 164
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 455 ISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ T ++ GT Y++PE G + + DVYS G ++ +++G P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 156
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 157 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 191
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
LG G FGSV + V + + A+K+L E E + LD P+IV L+G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+ L+L+ E+ L L+ ++ EE+ N E+ ++ G++YL E
Sbjct: 78 VC---QAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVA-ELLHQVSMGMKYLE---EK 129
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H D+ N+LL AKI DFGL++
Sbjct: 130 NFVHRDLAARNVLLVNRHYAKISDFGLSK 158
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 101 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 155
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 156 ---DIIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEM 190
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 149
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 150 ---DIIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEM 184
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL------DSSGSLQGEREFHNELSLASSLDCPHIV 140
LG GG V+ A + +AVK+L D S L+ RE N A++L+ P IV
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQN----AAALNHPAIV 75
Query: 141 SLL--GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
++ G A G ++ E ++ +L+D + E M + E+ D + L +
Sbjct: 76 AVYATGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFS 132
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H + +IH D+KP+NI++ K+ DFG+AR
Sbjct: 133 HQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 164
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 455 ISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ T ++ GT Y++PE G + + DVYS G ++ +++G P
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 75/154 (48%), Gaps = 8/154 (5%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
++LG G +G VY V S +AVK L +++ E EF E ++ + P++V LLG
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKED-TMEVE-EFLKEAAVMKEIKHPNLVQLLG 95
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+ ++ E M +L D L + EE+ + +A I+ +EYL +
Sbjct: 96 VCTLEP--PFYIVTEYMPYGNLLDYLRECNREEVTAVVLLY-MATQISSAMEYLE---KK 149
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+ + K+ DFGL+RL T D
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGD 183
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 16/153 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE----REFHNELSLASSLDCPHIVSL 142
LG G F +VYKA +++Q +A+K + + + R E+ L L P+I+ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 143 LGFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L D G + + L+++ ME L+ + D K + + +GLEYLH
Sbjct: 78 L----DAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMT--LQGLEYLHQ 130
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
++H D+KP+N+LLD + K+ DFGLA+
Sbjct: 131 HW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A S LA+K+L + + E + E+ + S L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 121
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI +FG
Sbjct: 122 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFG 156
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 168 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 213
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 156
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 157 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 191
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 102 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 156
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 157 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 191
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 98 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 150
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 151 --IIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 101 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 155
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 156 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 190
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 98 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 150
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 151 --IIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + E + S LD P V L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 98 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 150
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 151 --IIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 101 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 153
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 154 --IIHRDLKPENILLNEDMHIQITDFGTAKV 182
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 100 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 152
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 153 --IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G G V+ ++ +AVK L GS+ + F E +L L +V L
Sbjct: 20 RLGAGQAGEVWMGYYNGHTK-VAVKSL-KQGSMSPD-AFLAEANLMKQLQHQRLVRLYAV 76
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +I E MEN SL D L +L NK ++A IA+G+ ++ E
Sbjct: 77 VTQEP---IYIITEYMENGSLVDFLKTPSGIKLT-INKLLDMAAQIAEGMAFIE---ERN 129
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 100 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 152
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 153 --IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + E + S LD P V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 100 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 152
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 153 --IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLLG 144
LG G F +V A ++S+ A+KIL+ ++ + E + S LD P V L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
D L Y +N L + RK E RF A +I LEYLH
Sbjct: 82 TFQDDEKLYFGLSY--AKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG-- 134
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 135 -IIHRDLKPENILLNEDMHIQITDFGTAKV 163
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 101 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 153
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 154 --IIHRDLKPENILLNEDMHIQITDFGTAKV 182
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDC 136
+++ F +LG+G + +VYK + ++ +A+K + E+SL L
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
+IV L + +L L++E M+N + D+ +E N + +G
Sbjct: 63 ENIVRL--YDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQG 120
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
L + H E ++H D+KP N+L++ + K+GDFGLAR
Sbjct: 121 LAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 150
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 151 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 185
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 100 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 152
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 153 --IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 149
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 150 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 184
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 89 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 143
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 144 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 178
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 151
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 152 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 186
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 146
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 147 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 181
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 109 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 163
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 164 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 198
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLLG 144
LG G F +V A ++S+ A+KIL+ ++ + E + S LD P V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
D L Y +N L + RK E RF A +I LEYLH
Sbjct: 97 TFQDDEKLYFGLSY--AKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG-- 149
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKV 178
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 146
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 147 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 181
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + E + S LD P V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 100 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 152
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 153 --IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G +G VYKA S + +A+K + +G E+SL L P+IVSL+
Sbjct: 28 KVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
R L L++E ME + L+ L + K + +I I + + L + H +
Sbjct: 87 VIHSERC--LTLVFEFME-KDLKKVLDENKTGL-----QDSQIKIYLYQLLRGVAHCHQH 138
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
++H D+KP N+L++ D K+ DFGLAR
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 146
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 147 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 181
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 113 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 167
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 168 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 202
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 110 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 164
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 165 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 199
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 10/173 (5%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG--SLQGEREFHNELSLAS 132
R + + LG G FG V + +AVKIL+ SL + E+
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 133 SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA 192
PHI+ L S +V+ E + L D + E ME + F+ I
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVM--EYVSGGELFDYICKHGRVEEMEARRLFQ---QIL 121
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGEC 245
++Y H V+H D+KP N+LLD AKI DFGL+ + ++ + C
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 171
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 113 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 167
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 168 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 202
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 88 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 142
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 143 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 177
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 150
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 151 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 185
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSLLG 144
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
D L Y +N L + RK E RF A +I LEYLH
Sbjct: 100 TFQDDEKLYFGLSY--AKNGCLLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG-- 152
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 153 -IIHRDLKPENILLNEDMHIQITDFGTAKV 181
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 87 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 141
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 142 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 176
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Query: 82 SPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE---REFHNELSLASSLDCPH 138
SP++ +G G +GSV A+ S + +A+K L S Q E + + EL L + +
Sbjct: 28 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQHEN 84
Query: 139 IVSLLGF----ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
++ LL +S R L+ M+ LQ + + EE +++ + + KG
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQY-----LVYQMLKG 138
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
L+Y+H + V+H D+KP N+ ++ D + KI DFGLAR
Sbjct: 139 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 18/155 (11%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL------DSSGSLQGEREFHNELSLASSLDCPHIV 140
LG GG V+ A + +AVK+L D S L+ RE N A++L+ P IV
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQN----AAALNHPAIV 92
Query: 141 SLL--GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
++ G A G ++ E ++ +L+D + E M + E+ D + L +
Sbjct: 93 AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV---HTEGPMTPKRAIEVIADACQALNFS 149
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H + +IH D+KP+NI++ K+ DFG+AR
Sbjct: 150 HQNG---IIHRDVKPANIMISATNAVKVMDFGIAR 181
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 455 ISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ T ++ GT Y++PE G + + DVYS G ++ +++G P
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 103 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 155
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 156 --IIHRDLKPENILLNEDMHIQITDFGTAKV 184
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 151
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDL 239
+IH D+KPSN+ ++ D + KI DFGLAR +++
Sbjct: 152 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 87 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 141
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 142 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 176
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSLLG 144
LG G F +V A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
D L Y +N L + RK E RF A +I LEYLH
Sbjct: 105 CFQDDEKLYFGLSY--AKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG-- 157
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 158 -IIHRDLKPENILLNEDMHIQITDFGTAKV 186
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 69/150 (46%), Gaps = 10/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPHIVSLLG 144
LG G F +V A ++S+ A+KIL+ ++ + E + S LD P V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
D L Y +N L + RK E RF A +I LEYLH
Sbjct: 97 TFQDDEKLYFGLSY--AKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYLHGKG-- 149
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 150 -IIHRDLKPENILLNEDMHIQITDFGTAKV 178
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 140
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 141 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 175
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 10/173 (5%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG--SLQGEREFHNELSLAS 132
R + + LG G FG V + +AVKIL+ SL + E+
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 133 SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA 192
PHI+ L S +V+ E + L D + E ME + F+ I
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVM--EYVSGGELFDYICKHGRVEEMEARRLFQ---QIL 121
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGEC 245
++Y H V+H D+KP N+LLD AKI DFGL+ + ++ + C
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC 171
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G +G VYKA S + +A+K + +G E+SL L P+IVSL+
Sbjct: 28 KVGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
R L L++E ME + L+ L + K + +I I + + L + H +
Sbjct: 87 VIHSERC--LTLVFEFME-KDLKKVLDENKTGL-----QDSQIKIYLYQLLRGVAHCHQH 138
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
++H D+KP N+L++ D K+ DFGLAR
Sbjct: 139 RILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 95 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 149
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 150 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 184
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC +L + + +F I I +GL+Y+H +
Sbjct: 86 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCAKLTDDHVQFLI-YQILRGLKYIHSA 140
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 141 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 175
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 96 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 150
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 151 ---DIIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEM 185
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 92 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 146
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 147 ---DIIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEM 181
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 151
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDL 239
+IH D+KPSN+ ++ D + KI DFGLAR +++
Sbjct: 152 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG--EREFHNELSLASSL 134
A F LG G FG+VY A LA+K+L + + E + E+ + S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIA 192
P+I+ L G+ D L+L Y + + R+ ++L +++++ ++A
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPL-------GTVYRELQKLSKFDEQRTATYITELA 115
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H VIH DIKP N+LL + KI DFG
Sbjct: 116 NALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 150
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
++ GT+ Y+ PE G + EK D++S GVL + G+ P +
Sbjct: 162 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 97 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 151
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDL 239
+IH D+KPSN+ ++ D + KI DFGLAR +++
Sbjct: 152 ---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM 186
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQ---PLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG VY +Q A+K L +Q F E L L+ P++++L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G G VL+ + LQ R + + +A+G+EYL E
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQ---FIRSPQRNPTVKDLISFGLQVARGMEYL---AE 142
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H D+ N +LD F K+ DFGLAR
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 87 LGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V Y ++ + +AVK L + E+ + +L +IV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
G ++ G + LI E + + SL++ L K + + ++ + A+ I KG++YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGSR- 145
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H D+ N+L++ + + KIGDFGL +
Sbjct: 146 --QYVHRDLAARNVLVESEHQVKIGDFGLTK 174
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 18/169 (10%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLD 135
R + F LG G FG V KA S+ A+K + + + +E+ L +SL+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLN 60
Query: 136 CPHIVSLLGFASDRRG-----------RRLVLIYELMENRSLQDALLDRKCEELMEWNKR 184
++V +RR L + E ENR+L D + + + ++
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ--QRDEY 118
Query: 185 FEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ + I + L Y+H +IH D+KP NI +D KIGDFGLA+
Sbjct: 119 WRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 446 SGDIPKSGGISSTPSMRGTVCYIAPE-YGGGGLLSEKCDVYSFGVLILVLI 495
S ++P G + S GT Y+A E G G +EK D+YS G++ +I
Sbjct: 177 SQNLP--GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
+G G FG V+ + + +A+K + E +F E + L P +V L G
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
++ + L++E ME+ L D L R L + +D+ +G+ YL +C
Sbjct: 73 VCLEQAP--ICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 126
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
VIH D+ N L+ + K+ DFG+ R +D
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 87 LGHGGFGSV----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V Y ++ + +AVK L + E+ + +L +IV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
G ++ G + LI E + + SL++ L K + + ++ + A+ I KG++YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGSR- 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H D+ N+L++ + + KIGDFGL +
Sbjct: 134 --QYVHRDLAARNVLVESEHQVKIGDFGLTK 162
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + + + + +A+K L + + REF +E S+ + P+I+ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ ++++ E MEN +L L R + + + IA G+ YL E
Sbjct: 82 GVVTN--SMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYL---AE 134
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R E+
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 169
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKIL-DSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
+LG G +G V + A+KI+ +S S + E+++ LD P+I+ L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAI--DIAKGLEYLHHSC 202
F D+R LV+ E + L D ++ R M++N+ I + G+ YLH
Sbjct: 104 FFEDKRNYYLVM--ECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLH--- 153
Query: 203 EPPVIHGDIKPSNILLDG---DFKAKIGDFGLA 232
+ ++H D+KP N+LL+ D KI DFGL+
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE EKCDV+S GV++ +L++G P
Sbjct: 200 GTAYYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPPF 237
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
+G G FG V+ + + +A+K + GS+ E +F E + L P +V L G
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDK-VAIKTI-KEGSMS-EDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
++ + L++E ME+ L D L R L + +D+ +G+ YL +C
Sbjct: 90 VCLEQA--PICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 143
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
VIH D+ N L+ + K+ DFG+ R +D
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 176
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
+G G FG V+ + + +A+K + E +F E + L P +V L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
++ + L++E ME+ L D L R L + +D+ +G+ YL +C
Sbjct: 70 VCLEQAP--ICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 123
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
VIH D+ N L+ + K+ DFG+ R +D
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 156
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V + + + + +A+K L + + REF +E S+ + P+I+ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ ++++ E MEN +L L R + + + IA G+ YL E
Sbjct: 84 GVVTN--SMPVMILTEFMENGALDSFL--RLNDGQFTVIQLVGMLRGIASGMRYL---AE 136
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ NIL++ + K+ DFGL+R E+
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEEN 171
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 19/159 (11%)
Query: 82 SPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE---REFHNELSLASSLDCPH 138
SP++ +G G +GSV A+ S + +A+K L S Q E + + EL L + +
Sbjct: 46 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKL--SRPFQSEIFAKRAYRELLLLKHMQHEN 102
Query: 139 IVSLLGF----ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
++ LL +S R L+ M+ LQ + EE +++ + + KG
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEEKIQY-----LVYQMLKG 156
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
L+Y+H + V+H D+KP N+ ++ D + KI DFGLAR
Sbjct: 157 LKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
+G G FG V+ + + +A+K + E +F E + L P +V L G
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
++ + L++E ME+ L D L R L + +D+ +G+ YL +C
Sbjct: 68 VCLEQAP--ICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 121
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
VIH D+ N L+ + K+ DFG+ R +D
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 154
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--- 145
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+E E V +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR 189
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKTLEEFQDVYLVME---LMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 77/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--- 145
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+E E V +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR 189
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKTLEEFQDVYLVME---LMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILD-SSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
RLG G FG V+ +S++ +AVK L + S+Q F E +L +L +V L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRL-- 73
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+A R + +I E M SL D L + +++ K + + IA+G+ Y+
Sbjct: 74 YAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERK--- 129
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +N+L+ KI DFGLAR+
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARV 159
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 85 FTPQKTLEEFQDVYLVME---LMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG-- 139
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 140 -IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 182
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI D+GLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDYGLAR-HTDDEM 179
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 13/173 (7%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLD 135
R F P LG GGFG V++A A+K + + E+ + L+
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 136 CPHIVSLLGFASDRRGRR----------LVLIYELMENRSLQDALLDRKCEELMEWNKRF 185
P IV ++ L + +L +L+D + R E E +
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
I + IA+ +E+LH ++H D+KPSNI D K+GDFGL +D
Sbjct: 122 HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD 171
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 11/64 (17%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMS-EFERANLISWAR 521
GT Y++PE G S K D++S G+++ L+ P S + ER ++ R
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL----------YPFSTQMERVRTLTDVR 241
Query: 522 QLAY 525
L +
Sbjct: 242 NLKF 245
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 12/151 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSL-L 143
LG G F + A ++S+ A+KIL+ ++ + + E + S LD P V L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D + L + L ++ + RK E RF A +I LEYLH
Sbjct: 98 TFQDDEK-----LYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG- 150
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+IH D+KP NILL+ D +I DFG A++
Sbjct: 151 --IIHRDLKPENILLNEDMHIQITDFGTAKV 179
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV + S +AVK L S+ + + EL L + +++ LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 146 ----ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
S + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 119 FTPATSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 173
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 174 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 208
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD-SSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
LG G FG V K + Q AVK+++ +S + E+ L LD P+I+ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
D ++ EL L D ++ RK + I + G+ Y+H +
Sbjct: 90 LEDSSS--FYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 206 VIHGDIKPSNILLDG---DFKAKIGDFGLA 232
++H D+KP NILL+ D KI DFGL+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE G EKCDV+S GV++ +L+SG P
Sbjct: 185 GTAYYIAPEVLRGTY-DEKCDVWSAGVILYILLSGTPPF 222
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG VYKA +S A K++D+ + E ++ E+ + +S D P+IV LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLD-- 101
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ L ++ E ++ +L EL +I + + L+ L++ + +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVML-----ELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
IH D+K NIL D K+ DFG++ T
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG VYKA +S A K++D+ + E ++ E+ + +S D P+IV LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLD-- 101
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ L ++ E ++ +L EL +I + + L+ L++ + +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVML-----ELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
IH D+K NIL D K+ DFG++ T
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 27/172 (15%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD-----SSGSLQGEREFHNELSLASSLDCPHIVS 141
+G G F V + + + Q AVKI+D SS L E + E S+ L PHIV
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHIVE 90
Query: 142 LL-GFASDRRGRRLVLIYELMENRSLQDALLDRK------CEELMEWNKRFEIAIDIAKG 194
LL ++SD L +++E M+ L ++ R E + R I +
Sbjct: 91 LLETYSSDGM---LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEA 142
Query: 195 LEYLHHSCEPPVIHGDIKPSNILL---DGDFKAKIGDFGLARLKTEDLMIEG 243
L Y H + +IH D+KP N+LL + K+GDFG+A E ++ G
Sbjct: 143 LRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAG 191
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 8/150 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG VYKA +S A K++D+ + E ++ E+ + +S D P+IV LL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLD-- 101
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ L ++ E ++ +L EL +I + + L+ L++ + +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVML-----ELERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
IH D+K NIL D K+ DFG++ T
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNT 186
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD-SSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
LG G FG V K + Q AVK+++ +S + E+ L LD P+I+ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
D ++ EL L D ++ RK + I + G+ Y+H +
Sbjct: 90 LEDSSS--FYIVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMH---KHN 141
Query: 206 VIHGDIKPSNILLDG---DFKAKIGDFGLA 232
++H D+KP NILL+ D KI DFGL+
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE G EKCDV+S GV++ +L+SG P
Sbjct: 185 GTAYYIAPEVLRGTY-DEKCDVWSAGVILYILLSGTPPF 222
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 87 LGHGGFGSVYKA--VVPSSSQP-LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V +P + +A+K L S + + R+F +E S+ D P+++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G + + +++I E MEN SL L R+ + + + IA G++YL +
Sbjct: 75 GVVT--KSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQLVGMLRGIAAGMKYL---AD 127
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H + NIL++ + K+ DFGL+R +D
Sbjct: 128 MNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDD 162
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG V KA + +AVK+L + S R+ +E ++ ++ PH++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDAL---------------------LDRKCEELME 180
L G S + L+LI E + SL+ L LD E +
Sbjct: 91 LYGACS--QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 181 WNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A I++G++YL E ++H D+ NIL+ K KI DFGL+R
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIV 140
LG G FG V +A + +AVK+L S+ + +EL + S L +IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
+LLG + G +++I E L + L R+ ++E + F IA A + LH
Sbjct: 114 NLLGACT--HGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 201 SCEPP----------VIHGDIKPSNILLDGDFKAKIGDFGLAR 233
S + IH D+ N+LL AKIGDFGLAR
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 87 LGHGGFGSVYKA----VVPSSSQPL-AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG V+ A ++P + L AVK L + S ++F E L + L HIV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 107
Query: 142 LLGFASDRRGRRLVLIYELME----NRSLQ----DALLDRKCEEL----MEWNKRFEIAI 189
G ++ GR L++++E M NR L+ DA L E++ + + +A
Sbjct: 108 FFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A G+ YL +H D+ N L+ KIGDFG++R
Sbjct: 166 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 87 LGHGGFGSVYKA----VVPSSSQPL-AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG V+ A ++P + L AVK L + S ++F E L + L HIV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 78
Query: 142 LLGFASDRRGRRLVLIYELME----NRSLQ----DALLDRKCEEL----MEWNKRFEIAI 189
G ++ GR L++++E M NR L+ DA L E++ + + +A
Sbjct: 79 FFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A G+ YL +H D+ N L+ KIGDFG++R
Sbjct: 137 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 69/156 (44%), Gaps = 24/156 (15%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD-SSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
LG G FG V K + Q AVK+++ +S + E+ L LD P+I+ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE------IAIDIAKGLEYLH 199
D ++ EL L D ++ RK RF I + G+ Y+H
Sbjct: 90 LEDSSS--FYIVGELYTGGELFDEIIKRK---------RFSEHDAARIIKQVFSGITYMH 138
Query: 200 HSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLA 232
+ ++H D+KP NILL+ D KI DFGL+
Sbjct: 139 ---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE G EKCDV+S GV++ +L+SG P
Sbjct: 185 GTAYYIAPEVLRGTY-DEKCDVWSAGVILYILLSGTPPF 222
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG V KA + +AVK+L + S R+ +E ++ ++ PH++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDAL---------------------LDRKCEELME 180
L G S + L+LI E + SL+ L LD E +
Sbjct: 91 LYGACS--QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 181 WNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A I++G++YL E ++H D+ NIL+ K KI DFGL+R
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 73 LIRRATASFSPSNR----LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHN 126
++ +TA FS + LG G FG V + Q AVK++ Q +
Sbjct: 22 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 81
Query: 127 ELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
E+ L LD P+I+ L F D+ L+ E+ L D ++ RK ++ +
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 136
Query: 187 IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLA 232
I + G+ Y+H + ++H D+KP N+LL+ D +I DFGL+
Sbjct: 137 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE G EKCDV+S GV++ +L+SG P
Sbjct: 196 GTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPPF 233
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG V KA + +AVK+L + S R+ +E ++ ++ PH++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDAL---------------------LDRKCEELME 180
L G S + L+LI E + SL+ L LD E +
Sbjct: 91 LYGACS--QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 181 WNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A I++G++YL E ++H D+ NIL+ K KI DFGL+R
Sbjct: 149 MGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 87 LGHGGFGSVYKA----VVPSSSQPL-AVKILDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G FG V+ A ++P + L AVK L + S ++F E L + L HIV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVR 84
Query: 142 LLGFASDRRGRRLVLIYELME----NRSLQ----DALLDRKCEEL----MEWNKRFEIAI 189
G ++ GR L++++E M NR L+ DA L E++ + + +A
Sbjct: 85 FFGVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A G+ YL +H D+ N L+ KIGDFG++R
Sbjct: 143 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DF LAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFYLAR-HTDDEM 179
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 38/241 (15%)
Query: 78 TASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DC 136
T + +G G + + + +++ AVKI+D S +R+ E+ +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS-----KRDPTEEIEILLRYGQH 75
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D G+ + ++ ELM+ L D +L +K + + I K +E
Sbjct: 76 PNIITLKDVYDD--GKYVYVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVE 130
Query: 197 YLHHSCEPPVIHGDIKPSNILL---DGDFKA-KIGDFGLAR-LKTEDLMIEGECVKKR-- 249
YLH V+H D+KPSNIL G+ ++ +I DFG A+ L+ E+ ++ C
Sbjct: 131 YLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV 187
Query: 250 ----------DVNEDNGSILEETESVVTAYEESAGGGNGVDRSPESCVVRV----FDAEG 295
D D S+ +++T Y A NG D +PE + R+ F G
Sbjct: 188 APEVLERQGYDAACDIWSLGVLLYTMLTGYTPFA---NGPDDTPEEILARIGSGKFSLSG 244
Query: 296 G 296
G
Sbjct: 245 G 245
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL-DSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
LG G FG+VY A + +A+K+L S +G E + E+ + S L P+I+ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 145 FASDRRGRRLVLIY----ELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
+ DR+ L+L + EL + +++ ME ++A L Y H
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELADALHYCH- 131
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
E VIH DIKP N+L+ + KI DFG
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKIL-DSSGSLQG-EREFHNELSLASSLDCPH 138
F LG G FG+VY A + +A+K+L S +G E + E+ + S L P+
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 139 IVSLLGFASDRRGRRLVLIY----ELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
I+ + + DR+ L+L + EL + +++ ME ++A
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELADA 126
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y H E VIH DIKP N+L+ + KI DFG
Sbjct: 127 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 18/150 (12%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL-DSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
LG G FG+VY A + +A+K+L S +G E + E+ + S L P+I+ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 145 FASDRRGRRLVLIY----ELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
+ DR+ L+L + EL + +++ ME ++A L Y H
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME---------ELADALHYCH- 132
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
E VIH DIKP N+L+ + KI DFG
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 18/169 (10%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLD 135
R + F LG G FG V KA S+ A+K + + + +E+ L +SL+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVXLLASLN 60
Query: 136 CPHIVSLLGFASDRRG-----------RRLVLIYELMENRSLQDALLDRKCEELMEWNKR 184
++V +RR L + E ENR+L D + + + ++
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQ--QRDEY 118
Query: 185 FEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ + I + L Y+H +IH ++KP NI +D KIGDFGLA+
Sbjct: 119 WRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G + V++A+ ++++ + VKIL + +RE L + P+I++L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIK---ILENLRGGPNIITLADI 100
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
D R L++E + N + + L +++ RF + +I K L+Y H
Sbjct: 101 VKDPVSRTPALVFEHVNNTDFKQL-----YQTLTDYDIRFYMY-EILKALDYCHSMG--- 151
Query: 206 VIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
++H D+KP N+++D + K ++ D+GLA
Sbjct: 152 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 10/163 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG--SLQGEREFHNELSLASSLDCPHIVSL 142
+ LG G FG V + +AVKIL+ SL + E+ PHI+ L
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
S + ++ E + L D + + E + F+ I G++Y H
Sbjct: 82 YQVISTPSD--IFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ---QILSGVDYCHRHM 136
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGEC 245
V+H D+KP N+LLD AKI DFGL+ + ++ + C
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC 176
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKTLEEFQDVYLVME---LMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS----GSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +AVKI+D + SLQ + E+ + L+ P+IV L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKL 79
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L L+ E + D L+ + E +F I ++Y H
Sbjct: 80 --FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKY 134
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
++H D+K N+LLDGD KI DFG +
Sbjct: 135 ---IVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
+G G FG V+ + + +A+K + E +F E + L P +V L G
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
++ + L+ E ME+ L D L R L + +D+ +G+ YL +C
Sbjct: 71 VCLEQAP--ICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 124
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
VIH D+ N L+ + K+ DFG+ R +D
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPL--AVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
LG G FGSV + V + + A+K+L E E + LD P+IV L+G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+ L+L+ E+ L L+ ++ EE+ N E+ ++ G++YL E
Sbjct: 404 VC---QAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVA-ELLHQVSMGMKYLE---EK 455
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H ++ N+LL AKI DFGL++
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSK 484
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G+VY A+ ++ Q +A++ ++ + E NE+ + P+IV+ L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLD- 84
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E + SL D + E M+ + + + + LE+LH +
Sbjct: 85 -SYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH DIK NILL D K+ DFG
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFC 163
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G+VY A+ ++ Q +A++ ++ + E NE+ + P+IV+ L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLD- 84
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E + SL D + E M+ + + + + LE+LH +
Sbjct: 85 -SYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH DIK NILL D K+ DFG
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFC 163
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G+VY A+ ++ Q +A++ ++ + E NE+ + P+IV+ L
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLD- 84
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E + SL D + E M+ + + + + LE+LH +
Sbjct: 85 -SYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---Q 136
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH DIK NILL D K+ DFG
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFC 163
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 73 LIRRATASFSPSNR----LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHN 126
++ +TA FS + LG G FG V + Q AVK++ Q +
Sbjct: 40 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 99
Query: 127 ELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
E+ L LD P+I+ L F D+ L+ E+ L D ++ RK ++ +
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 154
Query: 187 IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLA 232
I + G+ Y+H + ++H D+KP N+LL+ D +I DFGL+
Sbjct: 155 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 200
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE G EKCDV+S GV++ +L+SG P
Sbjct: 214 GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF 251
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 74 IRRATASFSPSNR------LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHN 126
++ A ++F+ R +G G G V A +AVK L Q + +
Sbjct: 11 VQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR 70
Query: 127 ELSLASSLDCPHIVSLLG-FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRF 185
EL L ++ +I+SLL F + +Y +ME L DA L + ++ +
Sbjct: 71 ELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVME---LMDANLCQVIHMELDHERMS 127
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGEC 245
+ + G+++LH + +IH D+KPSNI++ D KI DFGLAR + + M+
Sbjct: 128 YLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYV 184
Query: 246 VKK 248
V +
Sbjct: 185 VTR 187
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 73/164 (44%), Gaps = 14/164 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPS---SSQPLAVKILDSSGSLQGE-REFHNELSLASSLDC 136
F+ LG G FGSV +A + S +AVK+L + + EF E + D
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 137 PHIVSLLGFASDRRGR-RL---VLIYELMENRSLQDALLDRKCEEL---MEWNKRFEIAI 189
PH+ L+G + R + RL ++I M++ L LL + E + +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
DIA G+EYL IH D+ N +L D + DFGL+R
Sbjct: 145 DIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSR 185
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 73 LIRRATASFSPSNR----LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHN 126
++ +TA FS + LG G FG V + Q AVK++ Q +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 127 ELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
E+ L LD P+I+ L F D+ L+ E+ L D ++ RK ++ +
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 130
Query: 187 IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLA 232
I + G+ Y+H + ++H D+KP N+LL+ D +I DFGL+
Sbjct: 131 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE G EKCDV+S GV++ +L+SG P
Sbjct: 190 GTAYYIAPEVLHGTY-DEKCDVWSTGVILYILLSGCPPF 227
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 73 LIRRATASFSPSNR----LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHN 126
++ +TA FS + LG G FG V + Q AVK++ Q +
Sbjct: 39 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 98
Query: 127 ELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
E+ L LD P+I+ L F D+ L+ E+ L D ++ RK ++ +
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 153
Query: 187 IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLA 232
I + G+ Y+H + ++H D+KP N+LL+ D +I DFGL+
Sbjct: 154 IIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 199
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE G EKCDV+S GV++ +L+SG P
Sbjct: 213 GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF 250
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V++ V ++ + K +++ L + NE+S+ + L P +++L
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLD-KYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 147 SDRRGRRLVLIYELMENRSLQD--ALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
D+ +VLI E + L D A D K E E+ + + E L H E
Sbjct: 118 EDKY--EMVLILEFLSGGELFDRIAAEDYKMSEA-------EVINYMRQACEGLKHMHEH 168
Query: 205 PVIHGDIKPSNILLDGD--FKAKIGDFGLA 232
++H DIKP NI+ + KI DFGLA
Sbjct: 169 SIVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G+VY A+ ++ Q +A++ ++ + E NE+ + P+IV+ L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLD- 85
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E + SL D + E M+ + + + + LE+LH +
Sbjct: 86 -SYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---Q 137
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH DIK NILL D K+ DFG
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFC 164
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +AVKI+D +S SLQ + E+ + L+ P+IV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L L+ E + D L+ + E +F I ++Y H
Sbjct: 79 --FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
++H D+K N+LLD D KI DFG +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 61 PNHNHCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAV 109
P HC R Y+ A+ P +RL G G FG V +A ++ + +AV
Sbjct: 7 PLDEHCERLPYD----ASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAV 62
Query: 110 KILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
K+L + R +EL + + ++V+LLG A + G L++I E + +L
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 121
Query: 169 ALLDRKCE---------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLD 219
L ++ E + + + +AKG+E+L IH D+ NILL
Sbjct: 122 YLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLS 178
Query: 220 GDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
KI DFGLAR D+ + + V+K D
Sbjct: 179 EKNVVKIXDFGLAR----DIYKDPDYVRKGD 205
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +AVKI+D +S SLQ + E+ + L+ P+IV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L L+ E + D L+ + E +F I ++Y H
Sbjct: 79 --FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
++H D+K N+LLD D KI DFG +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +AVKI+D +S SLQ + E+ + L+ P+IV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L L+ E + D L+ + E +F I ++Y H
Sbjct: 79 --FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
++H D+K N+LLD D KI DFG +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG+G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTK-VAIKTL-KPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAV 72
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L D + L N ++A +A G+ Y+
Sbjct: 73 VSEEP---IYIVTEYMNKGSLLDFLKDGEGRALKLPN-LVDMAAQVAAGMAYIERMN--- 125
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLARL
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARL 154
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 81 GVITENP---VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK-- 133
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ + K+GDFGL+R
Sbjct: 134 -RFVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 87 LGHGGFGSVY---KAVVPSSSQPLAVKILD-SSGSLQGEREFHNELSLASSLDCPHIVSL 142
LG G FG V+ K P S A+K+L ++ ++ E + + ++ P +V L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM--EWNKRFEIAIDIAKGLEYLHH 200
+A G+ L LI + + L R +E+M E + +F +A ++A GL++LH
Sbjct: 96 -HYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELALGLDHLHS 148
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+I+ D+KP NILLD + K+ DFGL++
Sbjct: 149 LG---IIYRDLKPENILLDEEGHIKLTDFGLSK 178
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
S GTV Y+APE S D +S+GVL+ +++G P Q
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI FGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILGFGLAR-HTDDEM 179
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 80 GVITENP---VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK-- 132
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ + K+GDFGL+R
Sbjct: 133 -RFVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
IV LL LV + M+ + DA + + F++ +GL +
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFC 121
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 122 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 130 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--- 183
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 184 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 227
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ E V +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR 189
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 129
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 130 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 184
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 185 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 227
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 90
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 91 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 145
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 146 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 188
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESK-- 130
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ + K+GDFGL+R
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A +AVK L Q + + EL L ++ +I+SLL
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + ++ + + + G+++LH +
Sbjct: 92 FTPQKTLEEFQDVYLVME---LMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA--- 145
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR + M+ V +
Sbjct: 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTR 189
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 93 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 147
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A Q +AVK L SL R + EL L L +++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 146 ----ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
S + L+ LM L + + K + L + + +F + + +GL+Y+H +
Sbjct: 96 FTPATSIEDFSEVYLVTTLM-GADLNNIV---KSQALSDEHVQF-LVYQLLRGLKYIHSA 150
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDL 239
+IH D+KPSN+ ++ D + +I DFGLAR E++
Sbjct: 151 G---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEM 185
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +AVKI+D +S SLQ + E+ + L+ P+IV L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 71
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L L+ E + D L+ + E +F I ++Y H
Sbjct: 72 --FEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQYCHQKF 126
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
++H D+K N+LLD D KI DFG +
Sbjct: 127 ---IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
IV LL LV + M+ + DA + + F++ +GL +
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFC 120
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 121 HSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA-SSLDCPHIVSLLG- 144
+G G G V+K + +AVK + SG+ + + +L + S DCP+IV G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F ++ ++ ME L ++ + + ++ + I K L YL +
Sbjct: 93 FITNTD------VFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE--KH 144
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH D+KPSNILLD + K+ DFG++
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK-- 130
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ + K+GDFGL+R
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 8/155 (5%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
IV LL +L L++E + ++ L+D +D + + +GL +
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFL-HQDLKD-FMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 120 HSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
IV LL LV + M+ + DA + + F++ +GL +
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLL----QGLAFC 122
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 123 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +AVKI+D +S SLQ + E+ + L+ P+IV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQ---KLFREVRIXKVLNHPNIVKL 78
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L L+ E + D L+ + E +F I ++Y H
Sbjct: 79 --FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
++H D+K N+LLD D KI DFG +
Sbjct: 134 ---IVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 83 GVITENP---VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK-- 135
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ + K+GDFGL+R
Sbjct: 136 -RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 75 GVITENP---VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK-- 127
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ + K+GDFGL+R
Sbjct: 128 -RFVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 92
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 93 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 147
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 84
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 85 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 139
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 140 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 182
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK-- 130
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ + K+GDFGL+R
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
IV LL LV + M+ + DA + + F++ +GL +
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLL----QGLAFC 122
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 123 HSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG VY+ V + +AVK +L + +F +E + +LD PHIV L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 144 GFASDRRGRRLVLIYELME-NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH-S 201
G + ++ +Y E L+ K L+ + ++ I K + YL +
Sbjct: 92 GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY------SLQICKAMAYLESIN 145
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
C +H DI NIL+ K+GDFGL+R
Sbjct: 146 C----VHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 86 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 140
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 141 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 458 GVITENP---VWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESK-- 510
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ + K+GDFGL+R
Sbjct: 511 -RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 106 GVITENP---VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESK-- 158
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ + K+GDFGL+R
Sbjct: 159 -RFVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+SLL
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV 85
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 86 FTPQKTLEEFQDVYLVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 140
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 141 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG VY+ V + +AVK +L + +F +E + +LD PHIV L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 144 GFASDRRGRRLVLIYELME-NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH-S 201
G + ++ +Y E L+ K L+ + ++ I K + YL +
Sbjct: 76 GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY------SLQICKAMAYLESIN 129
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
C +H DI NIL+ K+GDFGL+R
Sbjct: 130 C----VHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG VY+ V + +AVK +L + +F +E + +LD PHIV L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 144 GFASDRRGRRLVLIYELME-NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH-S 201
G + ++ +Y E L+ K L+ + ++ I K + YL +
Sbjct: 80 GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY------SLQICKAMAYLESIN 133
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
C +H DI NIL+ K+GDFGL+R
Sbjct: 134 C----VHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILD-SSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
+LG G FG V+ +S++ +AVK L + S+Q F E +L +L +V L
Sbjct: 19 KLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQA---FLEEANLMKTLQHDKLVRL-- 72
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+A + + +I E M SL D L + +++ K + + IA+G+ Y+
Sbjct: 73 YAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIERK--- 128
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +N+L+ KI DFGLAR+
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLARV 158
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
+G G FG V+ + + +A+K + E +F E + L P +V L G
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDK-VAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
++ + L++E ME+ L D L R L + +D+ +G+ YL E
Sbjct: 70 VCLEQAP--ICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EA 122
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
VIH D+ N L+ + K+ DFG+ R +D
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 156
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI D GLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDAGLAR-HTDDEM 179
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 10/161 (6%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLAS 132
+ + F LG G FG V+ + + A+K+L ++ ++ H +E + S
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 133 SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA 192
+ P I+ + G D +++ +I + +E L L RK + +F A ++
Sbjct: 62 IVTHPFIIRMWGTFQD--AQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKF-YAAEVC 116
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LEYLH +I+ D+KP NILLD + KI DFG A+
Sbjct: 117 LALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAK 154
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 458 TPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFER 513
T + GT YIAPE ++ D +SFG+LI +++G P ++ M +E+
Sbjct: 160 TYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YDSNTMKTYEK 214
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 78 GVITENP---VWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESK-- 130
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ K+GDFGL+R
Sbjct: 131 -RFVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 11/150 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG V++ + S P +A+K + S +F E D PHIV L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G ++ + +I EL L+ L RK ++ A ++ L YL
Sbjct: 458 GVITENP---VWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESK-- 510
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H DI N+L+ K+GDFGL+R
Sbjct: 511 -RFVHRDIAARNVLVSATDCVKLGDFGLSR 539
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIV 140
LG G FG V +A + +AVK+L S+ + +EL + S L +IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 141 SLLGFASDRRGRRLVLI----YELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
+LLG A G LV+ Y + N R +A LD++ +E + +A+G
Sbjct: 114 NLLG-ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 172
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ +L IH D+ N+LL AKIGDFGLAR
Sbjct: 173 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 208
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +AV+I+D +S SLQ + E+ + L+ P+IV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L L+ E + D L+ + E +F I ++Y H
Sbjct: 79 --FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
++H D+K N+LLD D KI DFG +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD----SSGSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +AV+I+D +S SLQ + E+ + L+ P+IV L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQ---KLFREVRIMKVLNHPNIVKL 78
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L L+ E + D L+ + E +F I ++Y H
Sbjct: 79 --FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQKF 133
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
++H D+K N+LLD D KI DFG +
Sbjct: 134 ---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 18/169 (10%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLD 135
R + F LG G FG V KA S+ A+K + + + +E+ L +SL+
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE--EKLSTILSEVMLLASLN 60
Query: 136 CPHIVSLLGFASDRRG-----------RRLVLIYELMENRSLQDALLDRKCEELMEWNKR 184
++V +RR L + E EN +L D + + + ++
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ--QRDEY 118
Query: 185 FEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ + I + L Y+H +IH D+KP NI +D KIGDFGLA+
Sbjct: 119 WRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 446 SGDIPKSGGISSTPSMRGTVCYIAPE-YGGGGLLSEKCDVYSFGVLILVLISGRRPLQVT 504
S ++P G + S GT Y+A E G G +EK D+YS G++ +I
Sbjct: 177 SQNLP--GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--------- 225
Query: 505 ASPMSE-FERANLISWARQLA 524
P S ER N++ R ++
Sbjct: 226 -YPFSTGMERVNILKKLRSVS 245
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG-F 145
LG G G V + + Q A+K+L S + E + H + S PHIV +L +
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG-----PHIVCILDVY 72
Query: 146 ASDRRGRR-LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH-HSCE 203
+ G+R L++I E ME L + +R + E + EI DI +++LH H+
Sbjct: 73 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSHN-- 129
Query: 204 PPVIHGDIKPSNILL---DGDFKAKIGDFGLARLKTEDLM 240
+ H D+KP N+L + D K+ DFG A+ T++ +
Sbjct: 130 --IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL 167
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 464 TVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 35/213 (16%)
Query: 61 PNHNHCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAV 109
P HC R Y+ A+ P +RL G G FG V +A ++ + +AV
Sbjct: 9 PLDEHCERLPYD----ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAV 64
Query: 110 KILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
K+L + R +EL + + ++V+LLG A + G L++I E + +L
Sbjct: 65 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 123
Query: 169 ALLDRKCE-----------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNIL 217
L ++ E + + + +AKG+E+L IH D+ NIL
Sbjct: 124 YLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNIL 180
Query: 218 LDGDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
L KI DFGLAR D+ + + V+K D
Sbjct: 181 LSEKNVVKICDFGLAR----DIXKDPDXVRKGD 209
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 73/163 (44%), Gaps = 20/163 (12%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIV 140
LG G FG V +A + +AVK+L S+ + +EL + S L +IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
+LLG + G +++I E L + L R+ ++E + F IA + LH
Sbjct: 114 NLLGACT--HGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 201 SCEPP----------VIHGDIKPSNILLDGDFKAKIGDFGLAR 233
S + IH D+ N+LL AKIGDFGLAR
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI D GLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDRGLAR-HTDDEM 179
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 74/159 (46%), Gaps = 16/159 (10%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIV 140
LG G FG V +A + +AVK+L S+ + +EL + S L +IV
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 141 SLLGFASDRRGRRLVLI----YELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
+LLG A G LV+ Y + N R +A LD++ +E + +A+G
Sbjct: 106 NLLG-ACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ +L IH D+ N+LL AKIGDFGLAR
Sbjct: 165 MAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + K ++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KXQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEM 179
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + ++ DA + + F++ +GL
Sbjct: 67 IVKLLDVIHTEN--KLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLL----QGLA 120
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + KC++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI D GLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDGGLAR-HTDDEM 179
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 3 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 62
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 63 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 121
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG++YL +H D+ N +LD F K+ DF
Sbjct: 122 IRNETHNPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 176
Query: 230 GLAR 233
GLAR
Sbjct: 177 GLAR 180
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 26/164 (15%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPH 138
FS +GHG FG+VY A +S+ +A+K + SG E+ + E+ L P+
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA------ 192
+ G LV+ Y L +L+E +K+ ++IA
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL------------GSASDLLEVHKKPLQEVEIAAVTHGA 124
Query: 193 -KGLEYLH-HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+GL YLH H+ +IH D+K NILL K+GDFG A +
Sbjct: 125 LQGLAYLHSHN----MIHRDVKAGNILLSEPGLVKLGDFGSASI 164
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 63
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 122
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG++YL +H D+ N +LD F K+ DF
Sbjct: 123 IRNETHNPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 230 GLAR 233
GLAR
Sbjct: 178 GLAR 181
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G FG V + +AVK + + + Q F E S+ + L ++V LLG
Sbjct: 201 IGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVI 255
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ +G L ++ E M SL D L R ++ + + ++D+ + +EYL +
Sbjct: 256 VEEKGG-LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NF 310
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H D+ N+L+ D AK+ DFGL +
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLG-F 145
LG G G V + + Q A+K+L S + E + H + S PHIV +L +
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGG-----PHIVCILDVY 91
Query: 146 ASDRRGRR-LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH-HSCE 203
+ G+R L++I E ME L + +R + E + EI DI +++LH H+
Sbjct: 92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSHN-- 148
Query: 204 PPVIHGDIKPSNILL---DGDFKAKIGDFGLARLKTEDLM 240
+ H D+KP N+L + D K+ DFG A+ T++ +
Sbjct: 149 --IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNAL 186
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 464 TVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 33/211 (15%)
Query: 61 PNHNHCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAV 109
P HC R Y+ A+ P +RL G G FG V +A ++ + +AV
Sbjct: 7 PLDEHCERLPYD----ASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAV 62
Query: 110 KILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
K+L + R +EL + + ++V+LLG A + G L++I E + +L
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 121
Query: 169 ALLDRKCE---------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLD 219
L ++ E + + + +AKG+E+L IH D+ NILL
Sbjct: 122 YLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLS 178
Query: 220 GDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
KI DFGLAR D+ + + V+K D
Sbjct: 179 EKNVVKICDFGLAR----DIYKDPDYVRKGD 205
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 24/163 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER--EFHNELSLASSLDCPH 138
FS +GHG FG+VY A +S+ +A+K + SG E+ + E+ L P+
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA------ 192
+ G LV+ Y L +L+E +K+ ++IA
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCL------------GSASDLLEVHKKPLQEVEIAAVTHGA 163
Query: 193 -KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+GL YLH +IH D+K NILL K+GDFG A +
Sbjct: 164 LQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASI 203
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 3 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 62
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 63 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 121
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG++YL +H D+ N +LD F K+ DF
Sbjct: 122 IRNETHNPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 176
Query: 230 GLAR 233
GLAR
Sbjct: 177 GLAR 180
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 10/147 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G+VY A+ ++ Q +A++ ++ + E NE+ + P+IV+ L
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL-IINEILVMRENKNPNIVNYLD- 85
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E + SL D + E M+ + + + + LE+LH +
Sbjct: 86 -SYLVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---Q 137
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH +IK NILL D K+ DFG
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFC 164
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 63
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 122
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG++YL +H D+ N +LD F K+ DF
Sbjct: 123 IRNETHNPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 230 GLAR 233
GLAR
Sbjct: 178 GLAR 181
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + K ++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KXQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGLAR T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEM 179
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 22 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 81
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 82 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 140
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG++YL +H D+ N +LD F K+ DF
Sbjct: 141 IRNETHNPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 195
Query: 230 GLAR 233
GLAR
Sbjct: 196 GLAR 199
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSG--SLQGEREFHNELSLASSLDCPHIVSLL 143
+LG G +G V + A+KI+ S + +E+++ LD P+I+ L
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 70
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D+R LV+ E+ L D ++ R ++ E + I + G YLH +
Sbjct: 71 EFFEDKRNYYLVM--EVYRGGELFDEIILR--QKFSEVDAAV-IMKQVLSGTTYLH---K 122
Query: 204 PPVIHGDIKPSNILLDG---DFKAKIGDFGLA 232
++H D+KP N+LL+ D KI DFGL+
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Score = 35.4 bits (80), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE EKCDV+S GV++ +L+ G P
Sbjct: 168 GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPF 205
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 10/160 (6%)
Query: 79 ASFSPSNRLGHGGFGSVYKAVVPSSSQPLA---VKILDSSGSLQGEREFHNELSLASSLD 135
A+F ++G G F VY+A P+A V+I D + + + E+ L L+
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA-KARADCIKEIDLLKQLN 90
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLD-RKCEELMEWNKRFEIAIDIAKG 194
P+++ +AS L ++ EL + L + +K + L+ ++ + +
Sbjct: 91 HPNVIKY--YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
LE++H V+H DIKP+N+ + K+GD GL R
Sbjct: 149 LEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRF 185
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 73 LIRRATASFSPSNR----LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHN 126
++ +TA FS + LG G FG V + Q AVK++ Q +
Sbjct: 16 FVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR 75
Query: 127 ELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
E+ L LD P+I L F D+ L+ E+ L D ++ RK ++ +
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKG--YFYLVGEVYTGGELFDEIISRKRFSEVDAAR--- 130
Query: 187 IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLA 232
I + G+ Y H + ++H D+KP N+LL+ D +I DFGL+
Sbjct: 131 IIRQVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE G EKCDV+S GV++ +L+SG P
Sbjct: 190 GTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 23 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 82
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 83 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 141
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG++YL +H D+ N +LD F K+ DF
Sbjct: 142 IRNETHNPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADF 196
Query: 230 GLAR 233
GLAR
Sbjct: 197 GLAR 200
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 274 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 330
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 331 VSEEP---IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--- 383
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARL 412
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 13/152 (8%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSG--SLQGEREFHNELSLASSLDCPHIVSLL 143
+LG G +G V + A+KI+ S + +E+++ LD P+I+ L
Sbjct: 28 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLY 87
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D+R LV+ E+ L D ++ R ++ E + I + G YLH +
Sbjct: 88 EFFEDKRNYYLVM--EVYRGGELFDEIILR--QKFSEVDAAV-IMKQVLSGTTYLH---K 139
Query: 204 PPVIHGDIKPSNILLDG---DFKAKIGDFGLA 232
++H D+KP N+LL+ D KI DFGL+
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT YIAPE EKCDV+S GV++ +L+ G P
Sbjct: 185 GTAYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPF 222
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 32/230 (13%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGF 145
+G G + + V +++ AVK++D S +R+ E+ + P+I++L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKS-----KRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
D G+ + L+ ELM L D +L +K E F + I K +EYLH
Sbjct: 90 YDD--GKHVYLVTELMRGGELLDKILRQKF--FSEREASF-VLHTIGKTVEYLHSQG--- 141
Query: 206 VIHGDIKPSNILL---DGDFKA-KIGDFGLAR-LKTEDLMIEGEC---------VKKRDV 251
V+H D+KPSNIL G+ + +I DFG A+ L+ E+ ++ C V KR
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 252 NEDNGSILEETESVVTAYEESAGGGNGVDRSPESCVVRV----FDAEGGS 297
++ I + T NG +PE + R+ F GG+
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN 251
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 454 GISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
G+ TP T ++APE E CD++S G+L+ +++G P
Sbjct: 180 GLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 68 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 121
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLGF 145
LG G F V A + + +A+K + + +L+G E NE+++ + P+IV+L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCI-AKKALEGKEGSMENEIAVLHKIKHPNIVALDDI 84
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
G L LI +L+ L D ++++ + ++ +D K YLH +
Sbjct: 85 Y--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---YLH---DLG 136
Query: 206 VIHGDIKPSNIL---LDGDFKAKIGDFGLARLKTEDLMIEGEC 245
++H D+KP N+L LD D K I DFGL++++ ++ C
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 443 DWASGDIPKSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
D+ + G + ST GT Y+APE S+ D +S GV+ +L+ G P
Sbjct: 162 DFGLSKMEDPGSVLSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G FG V +AVK + + + Q F E S+ + L ++V LLG
Sbjct: 29 IGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVI 83
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ +G L ++ E M SL D L R ++ + + ++D+ + +EYL +
Sbjct: 84 VEEKGG-LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NF 138
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H D+ N+L+ D AK+ DFGL +
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 57 DLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAVKILD 113
DL + N + + +I ++ + +G G FG VY + + AVK L+
Sbjct: 6 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 65
Query: 114 SSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDR 173
+ +F E + P+++SLLG G LV++ M++ L++ + +
Sbjct: 66 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNE 124
Query: 174 KCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
++ + +AKG++YL +H D+ N +LD F K+ DFGLAR
Sbjct: 125 THNPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 57 DLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAVKILD 113
DL + N + + +I ++ + +G G FG VY + + AVK L+
Sbjct: 3 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 62
Query: 114 SSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDR 173
+ +F E + P+++SLLG G LV++ M++ L++ + +
Sbjct: 63 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNE 121
Query: 174 KCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
++ + +AKG++YL +H D+ N +LD F K+ DFGLAR
Sbjct: 122 THNPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLS 117
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 92/214 (42%), Gaps = 36/214 (16%)
Query: 61 PNHNHCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAV 109
P HC R Y+ A+ P +RL G G FG V +A ++ + +AV
Sbjct: 8 PLDEHCERLPYD----ASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 63
Query: 110 KILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
K+L + R +EL + + ++V+LLG A + G L++I E + +L
Sbjct: 64 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 122
Query: 169 ALLDRKCE------------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
L ++ E + + + +AKG+E+L IH D+ NI
Sbjct: 123 YLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNI 179
Query: 217 LLDGDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
LL KI DFGLAR D+ + + V+K D
Sbjct: 180 LLSEKNVVKICDFGLAR----DIXKDPDXVRKGD 209
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 66 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 119
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 57 DLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAVKILD 113
DL + N + + +I ++ + +G G FG VY + + AVK L+
Sbjct: 5 DLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN 64
Query: 114 SSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDR 173
+ +F E + P+++SLLG G LV++ M++ L++ + +
Sbjct: 65 RITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNFIRNE 123
Query: 174 KCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
++ + +AKG++YL +H D+ N +LD F K+ DFGLAR
Sbjct: 124 THNPTVK--DLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 75 --REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G +G VYKA + + A+K + +G E+S+ L +IV L
Sbjct: 9 KIGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 145 FASDRRGRRLVLIYELMENRSLQDA--LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
++ RLVL++E ++ QD LLD CE +E + + G+ Y H
Sbjct: 68 VIHTKK--RLVLVFEHLD----QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCH--- 117
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ V+H D+KP N+L++ + + KI DFGLAR
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDC--- 136
++ P LG G V + + + + AVKI+D +G E EL A+ +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 137 ------PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAID 190
P+I+ L + L+++LM+ L D L ++ E K ++
Sbjct: 78 RKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ L L+ ++H D+KP NILLD D K+ DFG +
Sbjct: 136 VICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 74 --REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G +G VYKA + + A+K + +G E+S+ L +IV L
Sbjct: 9 KIGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 145 FASDRRGRRLVLIYELMENRSLQDA--LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
++ RLVL++E ++ QD LLD CE +E + + G+ Y H
Sbjct: 68 VIHTKK--RLVLVFEHLD----QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCH--- 117
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ V+H D+KP N+L++ + + KI DFGLAR
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGS-LQGE----------REFHNELS 129
+ P + +G G V + V ++ AVKI++ + L E RE H
Sbjct: 96 YDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 130 LASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAI 189
+A PHI++L+ S + L+++LM L D L ++ L E R I
Sbjct: 156 VAGH---PHIITLID--SYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETR-SIMR 207
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ + + +LH + ++H D+KP NILLD + + ++ DFG +
Sbjct: 208 SLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 65 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 118
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 67 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 120
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDC--- 136
++ P LG G V + + + + AVKI+D +G E EL A+ +
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 137 ------PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAID 190
P+I+ L + L+++LM+ L D L ++ E K ++
Sbjct: 78 RKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ L L+ ++H D+KP NILLD D K+ DFG +
Sbjct: 136 VICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS 171
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL-DSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
LG G FG+VY A S +A+K+L S +G E + E+ + + L P+I+ L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+ DRR R+ LI E L L + C + + I ++A L Y H
Sbjct: 91 YFYDRR--RIYLILEYAPRGELYKEL-QKSCT--FDEQRTATIMEELADALMYCHGK--- 142
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFG 230
VIH DIKP N+LL + KI DFG
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFG 168
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
+M GT+ Y+ PE G + +EK D++ GVL L+ G P +
Sbjct: 180 TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 65 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 118
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 67 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 120
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 66 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 119
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + + L+ ++V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG-- 72
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 66 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 119
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 120 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G +G VYKA + + A+K + +G E+S+ L +IV L
Sbjct: 9 KIGEGTYGVVYKAQ-NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 145 FASDRRGRRLVLIYELMENRSLQDA--LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
++ RLVL++E ++ QD LLD CE +E + + G+ Y H
Sbjct: 68 VIHTKK--RLVLVFEHLD----QDLKKLLDV-CEGGLESVTAKSFLLQLLNGIAYCH--- 117
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ V+H D+KP N+L++ + + KI DFGLAR
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G FG V +AVK + + + Q F E S+ + L ++V LLG
Sbjct: 14 IGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVI 68
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ +G L ++ E M SL D L R ++ + + ++D+ + +EYL +
Sbjct: 69 VEEKGG-LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NF 123
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H D+ N+L+ D AK+ DFGL +
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 70/162 (43%), Gaps = 17/162 (10%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDC--- 136
++ P LG G V + + + + AVKI+D +G E EL A+ +
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 137 ------PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAID 190
P+I+ L + L+++LM+ L D L ++ E K ++
Sbjct: 65 RKVSGHPNIIQLKD--TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 122
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ L L+ ++H D+KP NILLD D K+ DFG +
Sbjct: 123 VICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFS 158
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 68 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 121
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 61 PNHNHCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAV 109
P HC R Y+ A+ P +RL G G FG V +A ++ + +AV
Sbjct: 44 PLDEHCERLPYD----ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 99
Query: 110 KILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
K+L + R +EL + + ++V+LLG A + G L++I E + +L
Sbjct: 100 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 158
Query: 169 ALLDRKCE-------------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSN 215
L ++ E + + + +AKG+E+L IH D+ N
Sbjct: 159 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 215
Query: 216 ILLDGDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
ILL KI DFGLAR D+ + + V+K D
Sbjct: 216 ILLSEKNVVKICDFGLAR----DIYKDPDYVRKGD 246
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 71 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 124
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 71 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 124
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 125 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
+G G FG VY + + AVK L+ + +F E + P+++SLL
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G G LV++ M++ L++ + + ++ + +AKG++YL
Sbjct: 90 GICLRSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVK--DLIGFGLQVAKGMKYL---AS 143
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H D+ N +LD F K+ DFGLAR
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 65 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 118
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS----GSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +A+KI+D + SLQ + E+ + L+ P+IV L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKL 76
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L LI E + D L+ + E +F I ++Y H
Sbjct: 77 --FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCH--- 128
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ ++H D+K N+LLD D KI DFG +
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS----GSLQGEREFHNELSLASSLDCPHIVSL 142
+G G F V A + + +A+KI+D + SLQ + E+ + L+ P+IV L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKL 79
Query: 143 LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
F + L LI E + D L+ + E +F I ++Y H
Sbjct: 80 --FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCH--- 131
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ ++H D+K N+LLD D KI DFG +
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
IV LL LV + + ++ DA + + F++ +GL +
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLL----QGLAFC 118
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 38/232 (16%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGF 145
+G G + + + +++ AVKI+D S +R+ E+ + P+I++L
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKS-----KRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
D G+ + ++ EL + L D +L +K + + I K +EYLH
Sbjct: 85 YDD--GKYVYVVTELXKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQG--- 136
Query: 206 VIHGDIKPSNILL---DGDFKA-KIGDFGLAR-LKTEDLMIEGECVKKR----------- 249
V+H D+KPSNIL G+ ++ +I DFG A+ L+ E+ ++ C
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 250 -DVNEDNGSILEETESVVTAYEESAGGGNGVDRSPESCVVRV----FDAEGG 296
D D S+ + +T Y A NG D +PE + R+ F GG
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFA---NGPDDTPEEILARIGSGKFSLSGG 245
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 61 PNHNHCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAV 109
P HC R Y+ A+ P +RL G G FG V +A ++ + +AV
Sbjct: 7 PLDEHCERLPYD----ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62
Query: 110 KILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
K+L + R +EL + + ++V+LLG A + G L++I E + +L
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 121
Query: 169 ALLDRKCE-------------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSN 215
L ++ E + + + +AKG+E+L IH D+ N
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 178
Query: 216 ILLDGDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
ILL KI DFGLAR D+ + + V+K D
Sbjct: 179 ILLSEKNVVKICDFGLAR----DIYKDPDXVRKGD 209
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 65 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 118
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 61 PNHNHCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAV 109
P HC R Y+ A+ P +RL G G FG V +A ++ + +AV
Sbjct: 7 PLDEHCERLPYD----ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62
Query: 110 KILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
K+L + R +EL + + ++V+LLG A + G L++I E + +L
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 121
Query: 169 ALLDRKCE-------------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSN 215
L ++ E + + + +AKG+E+L IH D+ N
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 178
Query: 216 ILLDGDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
ILL KI DFGLAR D+ + + V+K D
Sbjct: 179 ILLSEKNVVKICDFGLAR----DIXKDPDXVRKGD 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 70
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 124
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATV 152
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 15 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 71
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 72 VSEEP---IXIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERM---N 124
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARL 153
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G F V A + + +A+K + E NE+++ + P+IV+L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
G L LI +L+ L D ++++ + ++ + + ++YLH + +
Sbjct: 86 --ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH---DLGI 137
Query: 207 IHGDIKPSNIL---LDGDFKAKIGDFGLARLKTEDLMIEGEC 245
+H D+KP N+L LD D K I DFGL++++ ++ C
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 443 DWASGDIPKSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
D+ + G + ST GT Y+APE S+ D +S GV+ +L+ G P
Sbjct: 162 DFGLSKMEDPGSVLSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 247
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 248 VSEEP---IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERM---N 300
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARL 329
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 61 PNHNHCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAV 109
P HC R Y+ A+ P +RL G G FG V +A ++ + +AV
Sbjct: 7 PLDEHCERLPYD----ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62
Query: 110 KILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
K+L + R +EL + + ++V+LLG A + G L++I E + +L
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 121
Query: 169 ALLDRKCE-------------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSN 215
L ++ E + + + +AKG+E+L IH D+ N
Sbjct: 122 YLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 178
Query: 216 ILLDGDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
ILL KI DFGLAR D+ + + V+K D
Sbjct: 179 ILLSEKNVVKICDFGLAR----DIYKDPDYVRKGD 209
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G F V A + + +A+K + E NE+++ + P+IV+L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
G L LI +L+ L D ++++ + ++ + + ++YLH + +
Sbjct: 86 --ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR---LIFQVLDAVKYLH---DLGI 137
Query: 207 IHGDIKPSNIL---LDGDFKAKIGDFGLARLKTEDLMIEGEC 245
+H D+KP N+L LD D K I DFGL++++ ++ C
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 443 DWASGDIPKSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
D+ + G + ST GT Y+APE S+ D +S GV+ +L+ G P
Sbjct: 162 DFGLSKMEDPGSVLSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 92/215 (42%), Gaps = 37/215 (17%)
Query: 61 PNHNHCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAV 109
P HC R Y+ A+ P +RL G G FG V +A ++ + +AV
Sbjct: 9 PLDEHCERLPYD----ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 64
Query: 110 KILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
K+L + R +EL + + ++V+LLG A + G L++I E + +L
Sbjct: 65 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVIVEFCKFGNLST 123
Query: 169 ALLDRKCE-------------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSN 215
L ++ E + + + +AKG+E+L IH D+ N
Sbjct: 124 YLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARN 180
Query: 216 ILLDGDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
ILL KI DFGLAR D+ + + V+K D
Sbjct: 181 ILLSEKNVVKICDFGLAR----DIYKDPDYVRKGD 211
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 247
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 248 VSEEP---IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERM---N 300
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARL 329
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 10/147 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G FG V +AVK + + + Q F E S+ + L ++V LLG
Sbjct: 20 IGKGEFGDVMLG--DYRGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVI 74
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ +G L ++ E M SL D L R ++ + + ++D+ + +EYL +
Sbjct: 75 VEEKGG-LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NF 129
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLAR 233
+H D+ N+L+ D AK+ DFGL +
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 18 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 74
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 75 VSEEP---IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERM---N 127
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARL 156
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHI 139
++ ++LG G + +VYK + +A+K + E+SL L +I
Sbjct: 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
V+L + L L++E + ++ L+ L D C ++ + + +GL Y H
Sbjct: 63 VTLHDIIHTEKS--LTLVFEYL-DKDLKQYLDD--CGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKT 236
V+H D+KP N+L++ + K+ DFGLAR K+
Sbjct: 118 RQ---KVLHRDLKPQNLLINERGELKLADFGLARAKS 151
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 13/157 (8%)
Query: 87 LGHGGFGSVYKAVVPS---SSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSL 142
LG G FGSV + + +S +AVK + S Q E EF +E + P+++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 143 LGFASDRRGRRL---VLIYELMENRSLQDALLDRKCE---ELMEWNKRFEIAIDIAKGLE 196
LG + + + ++I M+ L LL + E + + + +DIA G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
YL + +H D+ N +L D + DFGL++
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 91
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 92 FTPQKSLEEFQDVYIVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 146
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 147 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 92
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 93 FTPQKSLEEFQDVYIVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 147
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 148 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 72
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 82 VSEEP---IYIVIEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 101/230 (43%), Gaps = 32/230 (13%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIVSLLGF 145
+G G + + V +++ AVK++D S +R+ E+ + P+I++L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKS-----KRDPSEEIEILLRYGQHPNIITLKDV 89
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
D G+ + L+ ELM L D +L +K E F + I K +EYLH
Sbjct: 90 YDD--GKHVYLVTELMRGGELLDKILRQKF--FSEREASF-VLHTIGKTVEYLHSQ---G 141
Query: 206 VIHGDIKPSNILL---DGDFKA-KIGDFGLAR-LKTEDLMIEGEC---------VKKRDV 251
V+H D+KPSNIL G+ + +I DFG A+ L+ E+ ++ C V KR
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 252 NEDNGSILEETESVVTAYEESAGGGNGVDRSPESCVVRV----FDAEGGS 297
++ I + T NG +PE + R+ F GG+
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGN 251
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 454 GISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
G+ TP T ++APE E CD++S G+L+ +++G P
Sbjct: 180 GLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 96
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 97 FTPQKSLEEFQDVYIVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 151
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 152 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 194
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 93
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 94 FTPQKSLEEFQDVYIVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG-- 148
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMI 241
+IH D+KPSNI++ D KI DFGLAR M+
Sbjct: 149 -IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM 184
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 82 VSEEP---IYIVIEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F +G G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E M + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D K+ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F +G G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E M + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D K+ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASS 133
+R F +G+G +G VYK + Q A+K++D +G E E E+++
Sbjct: 19 LRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKK 76
Query: 134 LDCPHIVSLLGFASDRRG-----RRLVLIYELMENRSLQDALLDRKCEELME-WNKRFEI 187
++ A ++ +L L+ E S+ D + + K L E W I
Sbjct: 77 YSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--I 134
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+I +GL +LH VIH DIK N+LL + + K+ DFG++
Sbjct: 135 CREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 5 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 64
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 65 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 123
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG+++L +H D+ N +LD F K+ DF
Sbjct: 124 IRNETHNPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADF 178
Query: 230 GLAR 233
GLAR
Sbjct: 179 GLAR 182
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 82 VSEEP---IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+K + +G E+SL L+ P+
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAK----- 193
IV LL +L L++E + D+ ++ M+ + I + + K
Sbjct: 67 IVKLLDVIHTEN--KLYLVFEHV----------DQDLKKFMDASALTGIPLPLIKSYLFQ 114
Query: 194 ---GLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
GL + H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 16 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 72
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 73 VSEEP---IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 125
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARL 154
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 14 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 70
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 71 VSEEP---IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 123
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARL 152
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 9/186 (4%)
Query: 51 NRTAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---L 107
+ T DL + N + + +I ++ + +G G FG VY + +
Sbjct: 7 SNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHC 66
Query: 108 AVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQ 167
AVK L+ + +F E + P+++SLLG G LV++ M++ L+
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLR 125
Query: 168 DALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIG 227
+ + + ++ + +AKG+++L +H D+ N +LD F K+
Sbjct: 126 NFIRNETHNPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVA 180
Query: 228 DFGLAR 233
DFGLAR
Sbjct: 181 DFGLAR 186
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 12/161 (7%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSL 134
R T + LG G F V + V + +Q A KI+++ S + ++ E + L
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
P+IV L S+ LV ++L+ L + ++ R E+ + + I +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLV--FDLVTGGELFEDIVAR------EYYSEADASHCIHQI 139
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLA 232
LE ++H + ++H D+KP N+LL K K+ DFGLA
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 2 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 61
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 62 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 120
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG+++L +H D+ N +LD F K+ DF
Sbjct: 121 IRNETHNPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADF 175
Query: 230 GLAR 233
GLAR
Sbjct: 176 GLAR 179
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 63
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 122
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG+++L +H D+ N +LD F K+ DF
Sbjct: 123 IRNETHNPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 230 GLAR 233
GLAR
Sbjct: 178 GLAR 181
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V++ + AVK ++ E EL + L P IV L G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVK------KVRLEVFRAEELMACAGLTSPRIVPLYG- 133
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ R G + + EL+E SL + ++ C + ++ +GLEYLH
Sbjct: 134 -AVREGPWVNIFMELLEGGSLGQLVKEQGC---LPEDRALYYLGQALEGLEYLHSR---R 186
Query: 206 VIHGDIKPSNILLDGD-FKAKIGDFGLA 232
++HGD+K N+LL D A + DFG A
Sbjct: 187 ILHGDVKADNVLLSSDGSHAALCDFGHA 214
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 8/164 (4%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLG- 144
+G G G V A + +A+K L Q + + EL L ++ +I+ LL
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV 85
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + +Y +ME L DA L + + ++ + + + G+++LH +
Sbjct: 86 FTPQKSLEEFQDVYIVME---LMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA--- 139
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVKK 248
+IH D+KPSNI++ D KI DFGLAR M+ V +
Sbjct: 140 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 5 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 64
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 65 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 123
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG+++L +H D+ N +LD F K+ DF
Sbjct: 124 IRNETHNPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADF 178
Query: 230 GLAR 233
GLAR
Sbjct: 179 GLAR 182
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 4 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 63
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 64 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 122
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG+++L +H D+ N +LD F K+ DF
Sbjct: 123 IRNETHNPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 230 GLAR 233
GLAR
Sbjct: 178 GLAR 181
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V++ + AVK ++ E EL + L P IV L G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVK------KVRLEVFRAEELMACAGLTSPRIVPLYG- 152
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ R G + + EL+E SL + ++ C + ++ +GLEYLH
Sbjct: 153 -AVREGPWVNIFMELLEGGSLGQLVKEQGC---LPEDRALYYLGQALEGLEYLHSR---R 205
Query: 206 VIHGDIKPSNILLDGD-FKAKIGDFGLA 232
++HGD+K N+LL D A + DFG A
Sbjct: 206 ILHGDVKADNVLLSSDGSHAALCDFGHA 233
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 81/165 (49%), Gaps = 13/165 (7%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLL 143
+ LG G F V A + + +A+K + + +L+G E NE+++ + P+IV+L
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCI-AKEALEGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
G L LI +L+ L D ++++ + ++ +D K YLH +
Sbjct: 83 DIY--ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---YLH---D 134
Query: 204 PPVIHGDIKPSNIL---LDGDFKAKIGDFGLARLKTEDLMIEGEC 245
++H D+KP N+L LD D K I DFGL++++ ++ C
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC 179
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 443 DWASGDIPKSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
D+ + G + ST GT Y+APE S+ D +S GV+ +L+ G P
Sbjct: 162 DFGLSKMEDPGSVLSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 82 VSEEP---IYIVCEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 14/159 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-GSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +GSV A + +AVK L S+ + + EL L + +++ LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 146 ASDRRGRR----LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R + L+ LM L + + K ++L + + +F I I +GL+Y+H +
Sbjct: 90 FTPARSLEEFNDVYLVTHLM-GADLNNIV---KSQKLTDDHVQFLI-YQILRGLKYIHSA 144
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLM 240
+IH D+KPSN+ ++ D + KI DFGL R T+D M
Sbjct: 145 ---DIIHRDLKPSNLAVNEDSELKILDFGLCR-HTDDEM 179
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 247
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 248 VSEEP---IYIVGEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERM---N 300
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARL 329
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 73/148 (49%), Gaps = 5/148 (3%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVK-ILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +G V +A + +A+K IL L + E+++ + L+ H+V +L
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ + +Y ++E L R L E + + + ++ G++Y+H +
Sbjct: 121 VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIK-TLLYNLLVGVKYVHSAG--- 176
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLAR 233
++H D+KP+N L++ D K+ DFGLAR
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 23/177 (12%)
Query: 70 SYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELS 129
++ + +R F +G GGFG V+KA + +K + + + ERE +
Sbjct: 2 AHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE-KAERE----VK 56
Query: 130 LASSLDCPHIVSLLGF--------------ASDRRGRRLVLIYELMENRSLQDALLDRKC 175
+ LD +IV G +S + + L + E + +L+ + R+
Sbjct: 57 ALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 116
Query: 176 EELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
E+L + E+ I KG++Y+H +I+ D+KPSNI L + KIGDFGL
Sbjct: 117 EKL-DKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV 169
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
RLG G FG V++ + AVK ++ E EL + L P IV L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRVEELVACAGLSSPRIVPLYG- 131
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ R G + + EL+E SL + C + ++ +GLEYLH
Sbjct: 132 -AVREGPWVNIFMELLEGGSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTR---R 184
Query: 206 VIHGDIKPSNILLDGD-FKAKIGDFGLARLKTED 238
++HGD+K N+LL D +A + DFG A D
Sbjct: 185 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 218
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 9/184 (4%)
Query: 53 TAPSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAV 109
T DL + N + + +I ++ + +G G FG VY + + AV
Sbjct: 63 TVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAV 122
Query: 110 KILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA 169
K L+ + +F E + P+++SLLG G LV++ M++ L++
Sbjct: 123 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL-PYMKHGDLRNF 181
Query: 170 LLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDF 229
+ + ++ + +AKG+++L +H D+ N +LD F K+ DF
Sbjct: 182 IRNETHNPTVK--DLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADF 236
Query: 230 GLAR 233
GLAR
Sbjct: 237 GLAR 240
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG VYKA + A K++++ + E ++ E+ + ++ D P+IV LLG A
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLG-A 84
Query: 147 SDRRGRRLVLI----------YELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
G+ ++I L +R L + + C +++E L
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE-------------ALN 131
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA--RLKT 236
+LH +IH D+K N+L+ + ++ DFG++ LKT
Sbjct: 132 FLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 37/211 (17%)
Query: 65 HCRRFSYNLIRRATASFSPSNRL------GHGGFGSVYKAVV-----PSSSQPLAVKILD 113
HC R Y+ A+ P +RL G G FG V +A ++ + +AVK+L
Sbjct: 2 HCERLPYD----ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK 57
Query: 114 SSGSLQGEREFHNELSLASSL-DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLD 172
+ R +EL + + ++V+LLG A + G L++I E + +L L
Sbjct: 58 EGATHSEHRALMSELKILIHIGHHLNVVNLLG-ACTKPGGPLMVITEFCKFGNLSTYLRS 116
Query: 173 RKCE-------------ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLD 219
++ E + + + +AKG+E+L IH D+ NILL
Sbjct: 117 KRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 173
Query: 220 GDFKAKIGDFGLARLKTEDLMIEGECVKKRD 250
KI DFGLAR D+ + + V+K D
Sbjct: 174 EKNVVKICDFGLAR----DIYKDPDYVRKGD 200
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 8/147 (5%)
Query: 90 GGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFASDR 149
G FG VYKA +S A K++D+ + E ++ E+ + +S D P+IV LL +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELE-DYMVEIDILASCDHPNIVKLLD--AFY 77
Query: 150 RGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHG 209
L ++ E ++ +L EL +I + + L+ L++ + +IH
Sbjct: 78 YENNLWILIEFCAGGAVDAVML-----ELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 132
Query: 210 DIKPSNILLDGDFKAKIGDFGLARLKT 236
D+K NIL D K+ DFG++ T
Sbjct: 133 DLKAGNILFTLDGDIKLADFGVSAKNT 159
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 78
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + +++ IA G+ Y+
Sbjct: 79 VSEEP---IYIVTEYMNKGSLLD-FLKGETGKYLRLPQLVDMSAQIASGMAYVERM---N 131
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARL 160
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 96
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 97 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 151
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 152 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 78
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + +++ IA G+ Y+
Sbjct: 79 VSEEP---IYIVTEYMNKGSLLD-FLKGETGKYLRLPQLVDMSAQIASGMAYVERM---N 131
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARL 160
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G FG V+ + + + +AVK + + +F E + P+IV L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+ ++ IY +ME D L + E + ++ D A G+EYL C
Sbjct: 181 CTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC-- 233
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH D+ N L+ KI DFG++R
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFGMSR 261
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 441 SQDWASGDIPKSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLI 491
S++ A G SGG+ P V + APE G S + DV+SFG+L+
Sbjct: 260 SREEADGVXAASGGLRQVP-----VKWTAPEALNYGRYSSESDVWSFGILL 305
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 121
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 122 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 180
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 181 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 224
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 464 TVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + + +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKIRHEKLVQLYAV 81
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 82 VSEEP---IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ A ++ +AVK + GS+ E F E ++ +L +V L
Sbjct: 22 KLGAGQFGEVWMATYNKHTK-VAVKTM-KPGSMSVE-AFLAEANVMKTLQHDKLVKLHAV 78
Query: 146 ASDRRGRRLVLIYELMENRSLQDAL-LDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+ + +I E M SL D L D ++ + K + + IA+G+ ++
Sbjct: 79 VTKEP---IYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN-- 131
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLAR+
Sbjct: 132 -YIHRDLRAANILVSASLVCKIADFGLARV 160
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 465 VCYIAPEYGGGGLLSEKCDVYSFGVLILVLIS-GRRPLQVTASP 507
+ + APE G + K DV+SFG+L++ +++ GR P ++P
Sbjct: 176 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 219
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 82 VSEEP---IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D+ +NIL+ + K+ DFGLARL
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARL 163
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 29 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 83
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 84 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 142
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 143 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 186
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 464 TVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ A ++ +AVK + GS+ E F E ++ +L +V L
Sbjct: 195 KLGAGQFGEVWMATYNKHTK-VAVKTM-KPGSMSVE-AFLAEANVMKTLQHDKLVKLHAV 251
Query: 146 ASDRRGRRLVLIYELMENRSLQDAL-LDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+ + +I E M SL D L D ++ + K + + IA+G+ ++
Sbjct: 252 VTKEP---IYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN-- 304
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLAR+
Sbjct: 305 -YIHRDLRAANILVSASLVCKIADFGLARV 333
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 465 VCYIAPEYGGGGLLSEKCDVYSFGVLILVLIS-GRRPLQVTASP 507
+ + APE G + K DV+SFG+L++ +++ GR P ++P
Sbjct: 349 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 392
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 27 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 81
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 82 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 140
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 141 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 184
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 457 STPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
+TP T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 181 TTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 37 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 91
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 92 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 150
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 151 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 194
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 464 TVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 77
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 136
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 137 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 180
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 457 STPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
+TP T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 177 TTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ A ++ +AVK + GS+ E F E ++ +L +V L
Sbjct: 189 KLGAGQFGEVWMATYNKHTK-VAVKTM-KPGSMSVE-AFLAEANVMKTLQHDKLVKLHAV 245
Query: 146 ASDRRGRRLVLIYELMENRSLQDAL-LDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+ + +I E M SL D L D ++ + K + + IA+G+ ++
Sbjct: 246 VTKEP---IYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN-- 298
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
IH D++ +NIL+ KI DFGLAR+
Sbjct: 299 -YIHRDLRAANILVSASLVCKIADFGLARV 327
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 465 VCYIAPEYGGGGLLSEKCDVYSFGVLILVLIS-GRRPLQVTASP 507
+ + APE G + K DV+SFG+L++ +++ GR P ++P
Sbjct: 333 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 376
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 77
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 136
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 137 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 180
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 457 STPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
+TP T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 177 TTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 73 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 127
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 128 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 186
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 187 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 230
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 464 TVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 9/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G FG V+ + + + +AVK + + +F E + P+IV L+G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
+ ++ IY +ME D L + E + ++ D A G+EYL C
Sbjct: 181 CTQKQP-----IYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC-- 233
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH D+ N L+ KI DFG++R
Sbjct: 234 -CIHRDLAARNCLVTEKNVLKISDFGMSR 261
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 441 SQDWASGDIPKSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLI 491
S++ A G SGG+ P V + APE G S + DV+SFG+L+
Sbjct: 260 SREEADGVYAASGGLRQVP-----VKWTAPEALNYGRYSSESDVWSFGILL 305
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 75
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 134
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 135 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 178
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 457 STPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
+TP T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 175 TTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 22 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 76
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 77 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 135
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 136 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 179
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 457 STPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
+TP T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 176 TTPCY--TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG VYKA + A K++++ + E ++ E+ + ++ D P+IV LLG A
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELE-DYIVEIEILATCDHPYIVKLLG-A 76
Query: 147 SDRRGRRLVLI----------YELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
G+ ++I L +R L + + C +++E L
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE-------------ALN 123
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA--RLKT 236
+LH +IH D+K N+L+ + ++ DFG++ LKT
Sbjct: 124 FLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 162
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 77
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 136
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKT 236
+ H D+KP N+L + K+ DFG A+ T
Sbjct: 137 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 28 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 82
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 83 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 141
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 142 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 185
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 464 TVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 123 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 177
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V K +AVK++ GS+ E EF E L P +V G
Sbjct: 16 LGSGQFGVV-KLGKWKGQYDVAVKMI-KEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
S + + ++ E + N L + L R + +E ++ E+ D+ +G+ +L
Sbjct: 73 S--KEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQF 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
IH D+ N L+D D K+ DFG+ R +D
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPHIVSLLG 144
LG G FG V + A+KILD ++ ++ H NE + +++ P +V L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 145 FASDRRGRRLVLIY----ELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
D +VL Y E+ + R+ E + RF A I EYLH
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHL--------RRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+I+ D+KP N+L+D K+ DFG A+
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M L D L + + + + ++A IA G+ Y+
Sbjct: 82 VSEEP---IYIVMEYMSKGCLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 103 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+ + +G E+SL L+ P+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 64 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 117
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPH 138
+F ++G G +G VYKA + + +A+ + +G E+SL L+ P+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 139 IVSLLGFASDRRGRRLVLIYELMEN--RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
IV LL +L L++E + + DA + + F++ +GL
Sbjct: 63 IVKLLDVIHTEN--KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLL----QGLA 116
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ H V+H D+KP N+L++ + K+ DFGLAR
Sbjct: 117 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K+L + E E H S CPHIV ++
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-----QCPHIVRIV 75
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSI 134
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKT 236
+ H D+KP N+L + K+ DFG A+ T
Sbjct: 135 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 169
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 464 TVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
T Y+APE G + CD++S GV++ +L+ G P
Sbjct: 180 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 30/186 (16%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G +G+VYK + +P+AVK+ S + F NE ++ H
Sbjct: 21 IGRGRYGAVYKGSL--DERPVAVKVF----SFANRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 147 SDRR----GR-RLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
D R GR +L+ E N SL L +W +A + +GL YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTE 130
Query: 202 C------EPPVIHGDIKPSNILLDGDFKAKIGDFGLA-RLKTEDLMIEGECVKKRDVNED 254
+P + H D+ N+L+ D I DFGL+ RL L+ GE ED
Sbjct: 131 LPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGE--------ED 182
Query: 255 NGSILE 260
N +I E
Sbjct: 183 NAAISE 188
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 11/155 (7%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE--FHNELSLASSLDCPHIVS 141
S LG G F V + + S+ Q A K L Q R H L + CP +++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
L + ++LI E + L E + E N + I +G+ YLH +
Sbjct: 94 LHEVYENTS--EIILILEYAAGGEIFSLCLPELAEMVSE-NDVIRLIKQILEGVYYLHQN 150
Query: 202 CEPPVIHGDIKPSNILLDGDF---KAKIGDFGLAR 233
++H D+KP NILL + KI DFG++R
Sbjct: 151 ---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR 182
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G FG V KA ++ +A+K ++S + F EL S ++ P+IV L G
Sbjct: 17 VGRGAFGVVCKA--KWRAKDVAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ + L+ E E SL + L + + ++G+ YLH +
Sbjct: 72 LNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 207 IHGDIKPSNILL-DGDFKAKIGDFGLA 232
IH D+KP N+LL G KI DFG A
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTA 154
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 462 RGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFERANLISWAR 521
+G+ ++APE G SEKCDV+S+G+++ +I+ R+P P A I WA
Sbjct: 165 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP------AFRIMWAV 218
Query: 522 QLAYNGKLLDLVDPSIHSLDKDXXXXXXXXXXXXXXRSPSKRLTMKDIVEMLT 574
L+ + I SL + PS+R +M++IV+++T
Sbjct: 219 HNGTRPPLIKNLPKPIESL-----------MTRCWSKDPSQRPSMEEIVKIMT 260
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 18/159 (11%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKIL-----DSSGSLQ-GEREFHNELSLASSLDCPH 138
++LG GG +VY A + +A+K + + +L+ ERE HN +S L +
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN----SSQLSHQN 72
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
IVS++ D L+ E +E +L + + + + + I G+++
Sbjct: 73 IVSMIDV--DEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHA 127
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
H + ++H DIKP NIL+D + KI DFG+A+ +E
Sbjct: 128 H---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 454 GISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ T + GTV Y +PE G E D+YS G+++ ++ G P
Sbjct: 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAV 81
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M L D L + + + + ++A IA G+ Y+
Sbjct: 82 VSEEP---IYIVTEYMSKGCLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGLARL
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCPH 138
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
+V L S + L ++ E + + L R+ E + RF A I EYL
Sbjct: 124 LVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 178
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
H +I+ D+KP N+L+D ++ DFG A+
Sbjct: 179 H---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
R+G G FG V++ + AVK ++ E EL + L P IV L G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRVEELVACAGLSSPRIVPLYG- 117
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ R G + + EL+E SL + C + ++ +GLEYLH
Sbjct: 118 -AVREGPWVNIFMELLEGGSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTR---R 170
Query: 206 VIHGDIKPSNILLDGD-FKAKIGDFGLARLKTED 238
++HGD+K N+LL D +A + DFG A D
Sbjct: 171 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G FG V KA ++ +A+K ++S + F EL S ++ P+IV L G
Sbjct: 16 VGRGAFGVVCKA--KWRAKDVAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ + L+ E E SL + L + + ++G+ YLH +
Sbjct: 71 LNP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 207 IHGDIKPSNILL-DGDFKAKIGDFGLA 232
IH D+KP N+LL G KI DFG A
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTA 153
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 462 RGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFERANLISWAR 521
+G+ ++APE G SEKCDV+S+G+++ +I+ R+P P A I WA
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP------AFRIMWAV 217
Query: 522 QLAYNGKLLDLVDPSIHSLDKDXXXXXXXXXXXXXXRSPSKRLTMKDIVEMLT 574
L+ + I SL + PS+R +M++IV+++T
Sbjct: 218 HNGTRPPLIKNLPKPIESL-----------MTRCWSKDPSQRPSMEEIVKIMT 259
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 14/167 (8%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G G V + + + A+K L + E E H S CPHIV ++
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRAS-----QCPHIVRIV 121
Query: 144 GFASDRRGRR--LVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
+ R L+++ E ++ L + DR + E + EI I + ++YLH
Sbjct: 122 DVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTE-REASEIXKSIGEAIQYLHSI 180
Query: 202 CEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
+ H D+KP N+L + K+ DFG A+ T + C
Sbjct: 181 ---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPC 224
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 457 STPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
+TP T Y+APE G + CD +S GV+ +L+ G P
Sbjct: 221 TTPCY--TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--YSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG---EREFHNELSL 130
I+ F LG G FG V+ A ++Q A+K L L E + L
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 131 ASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAID 190
+ + + P + + F + + L + E + L + + C + + ++ A +
Sbjct: 73 SLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKF-DLSRATFYAAE 127
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
I GL++LH +++ D+K NILLD D KI DFG+ +
Sbjct: 128 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 167
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 454 GISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
G + T GT YIAPE G + D +SFGVL+ ++ G+ P
Sbjct: 172 GDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 88
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 89 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 143
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 144 LH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKIL--DSSGSLQGEREFHNELSLASSLDCPHIVSLLG 144
+G G +G+V AV + +A+K L L +R + EL L + +++ LL
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMRHENVIGLLD 91
Query: 145 -FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F D Y +M L K E+L E +F + + KGL Y+H +
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKL-MKHEKLGEDRIQF-LVYQMLKGLRYIHAAG- 148
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+IH D+KP N+ ++ D + KI DFGLAR
Sbjct: 149 --IIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G G V AV + + +AVKI+D ++ E+ + L+ ++V G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R G L E L D + + + F + G+ YLH +
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFH---QLMAGVVYLHGIG---I 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARL 234
H DIKP N+LLD KI DFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 15/154 (9%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
R+G G FG V++ + AVK ++ E EL + L P IV L G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVK------KVRLEVFRVEELVACAGLSSPRIVPLYG- 133
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ R G + + EL+E SL + C + ++ +GLEYLH
Sbjct: 134 -AVREGPWVNIFMELLEGGSLGQLIKQMGC---LPEDRALYYLGQALEGLEYLHTR---R 186
Query: 206 VIHGDIKPSNILLDGD-FKAKIGDFGLARLKTED 238
++HGD+K N+LL D +A + DFG A D
Sbjct: 187 ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 220
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G FG V+ +++ +A+K L G++ E F E + L +V L
Sbjct: 192 KLGQGCFGEVWMGTWNGTTR-VAIKTL-KPGNMSPE-AFLQEAQVMKKLRHEKLVQLYAV 248
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ + ++ E M SL D L + + + + ++A IA G+ Y+
Sbjct: 249 VSEEP---IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---N 301
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+H D++ +NIL+ + K+ DFGL RL
Sbjct: 302 YVHRDLRAANILVGENLVCKVADFGLGRL 330
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F +G G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D K+ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G V A + + +AVK +D + E F NE+ + ++V + +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLF-NEVVIMRDYHHDNVVDM--Y 108
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+S G L ++ E +E +L D + + E + + + + + L YLH+
Sbjct: 109 SSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIATVCLSVLRALSYLHNQG--- 161
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLA 232
VIH DIK +ILL D + K+ DFG
Sbjct: 162 VIHRDIKSDSILLTSDGRIKLSDFGFC 188
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 103 IITLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 71 YNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSL 130
Y + +R F +G GGFG V+KA + ++ + + + ERE +
Sbjct: 4 YTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE-KAERE----VKA 58
Query: 131 ASSLDCPHIVSLLGF---------------------------ASDRRGRRLVLIYELMEN 163
+ LD +IV G +S + + L + E +
Sbjct: 59 LAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDK 118
Query: 164 RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFK 223
+L+ + R+ E+L + E+ I KG++Y+H +IH D+KPSNI L +
Sbjct: 119 GTLEQWIEKRRGEKL-DKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQ 174
Query: 224 AKIGDFGLA 232
KIGDFGL
Sbjct: 175 VKIGDFGLV 183
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V S A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S LG G + V AV + + AVKI++ R F +L +I+ L+
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIAKGLEYLHHS 201
F D R L++E ++ S+ + +K +N+R + D+A L++LH
Sbjct: 78 EFFED--DTRFYLVFEKLQGGSILAHIQKQK-----HFNEREASRVVRDVAAALDFLHTK 130
Query: 202 CEPPVIHGDIKPSNILLDGDFK---AKIGDFGL 231
+ H D+KP NIL + K KI DF L
Sbjct: 131 ---GIAHRDLKPENILCESPEKVSPVKICDFDL 160
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 103 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 95 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 149
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V K +A+K++ GS+ E EF E + +L +V L G
Sbjct: 17 LGTGQFGVV-KYGKWRGQYDVAIKMI-KEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ +R + +I E M N L + L R+ + + E+ D+ + +EYL
Sbjct: 74 TKQRP--IFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ N L++ K+ DFGL+R +D
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 158
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V K +A+K++ GS+ E EF E + +L +V L G
Sbjct: 16 LGTGQFGVV-KYGKWRGQYDVAIKMI-KEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ + R + +I E M N L + L R+ + + E+ D+ + +EYL
Sbjct: 73 T--KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 125
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ N L++ K+ DFGL+R +D
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 157
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAV-VPSSSQPLAVKIL-----DSSGSLQGEREFHNELS 129
RA + +G G +G V+KA + + + +A+K + + L RE L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AVLR 66
Query: 130 LASSLDCPHIVSLLGFASDRRGRR---LVLIYELMENRSLQD--ALLDRKCEELMEWNKR 184
+ + P++V L + R R L L++E ++ QD LD+ E +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETI 122
Query: 185 FEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGE 244
++ + +GL++LH V+H D+KP NIL+ + K+ DFGLAR+ + + +
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179
Query: 245 CV 246
V
Sbjct: 180 VV 181
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG + + L +I E +L++ L ++R EE M +
Sbjct: 103 IINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAV-VPSSSQPLAVKIL-----DSSGSLQGEREFHNELS 129
RA + +G G +G V+KA + + + +A+K + + L RE L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AVLR 66
Query: 130 LASSLDCPHIVSLLGFASDRRGRR---LVLIYELMENRSLQD--ALLDRKCEELMEWNKR 184
+ + P++V L + R R L L++E ++ QD LD+ E +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETI 122
Query: 185 FEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGE 244
++ + +GL++LH V+H D+KP NIL+ + K+ DFGLAR+ + + +
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179
Query: 245 CV 246
V
Sbjct: 180 VV 181
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 103 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V K +A+K++ GS+ E EF E + +L +V L G
Sbjct: 23 LGTGQFGVV-KYGKWRGQYDVAIKMI-KEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ + R + +I E M N L + L R+ + + E+ D+ + +EYL
Sbjct: 80 T--KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 132
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ N L++ K+ DFGL+R +D
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 164
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 103 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V K +A+K++ GS+ E EF E + +L +V L G
Sbjct: 17 LGTGQFGVV-KYGKWRGQYDVAIKMI-KEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ + R + +I E M N L + L R+ + + E+ D+ + +EYL
Sbjct: 74 T--KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 126
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ N L++ K+ DFGL+R +D
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 158
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 103 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 103 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLLGF 145
LG G F V + V + Q A KI+++ S + ++ E + L P+IV L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S+ LI++L+ L + ++ R E+ + + I + LE + H +
Sbjct: 90 ISEEGHH--YLIFDLVTGGELFEDIVAR------EYYSEADASHCIQQILEAVLHCHQMG 141
Query: 206 VIHGDIKPSNILLDGDFK---AKIGDFGLARLKTEDLMIEGE 244
V+H D+KP N+LL K K+ DFGLA + +EGE
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA------IEVEGE 177
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G V A V SS + +AVK +D + E F NE+ + ++V + +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--Y 214
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E +E +L D + + E + + + + + L LH
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHAQG--- 267
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGL 231
VIH DIK +ILL D + K+ DFG
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGF 293
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 103 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 11/163 (6%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG---EREFHNELSL 130
I+ F LG G FG V+ A ++Q A+K L L E + L
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 131 ASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAID 190
+ + + P + + F + + L + E + L + + C + + ++ A +
Sbjct: 72 SLAWEHPFLTHM--FCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKF-DLSRATFYAAE 126
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
I GL++LH +++ D+K NILLD D KI DFG+ +
Sbjct: 127 IILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCK 166
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 454 GISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
G + T GT YIAPE G + D +SFGVL+ ++ G+ P
Sbjct: 171 GDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 19/182 (10%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAV-VPSSSQPLAVKIL-----DSSGSLQGEREFHNELS 129
RA + +G G +G V+KA + + + +A+K + + L RE L
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREV-AVLR 66
Query: 130 LASSLDCPHIVSLLGFASDRRGRR---LVLIYELMENRSLQD--ALLDRKCEELMEWNKR 184
+ + P++V L + R R L L++E ++ QD LD+ E +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD----QDLTTYLDKVPEPGVPTETI 122
Query: 185 FEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGE 244
++ + +GL++LH V+H D+KP NIL+ + K+ DFGLAR+ + + +
Sbjct: 123 KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV 179
Query: 245 CV 246
V
Sbjct: 180 VV 181
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 103 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V K +A+K++ GS+ E EF E + +L +V L G
Sbjct: 12 LGTGQFGVV-KYGKWRGQYDVAIKMI-KEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ + R + +I E M N L + L R+ + + E+ D+ + +EYL
Sbjct: 69 T--KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQF 121
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ N L++ K+ DFGL+R +D
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ + H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D K+ DFGLA+
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 21/161 (13%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF- 145
+G G +G V++ + S +AVKI S + E+ + E + +++ H ++LGF
Sbjct: 16 VGKGRYGEVWRGLWHGES--VAVKIFSS----RDEQSWFRETEIYNTVLLRHD-NILGFI 68
Query: 146 ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
ASD R +L LI E+ SL D L + +E + +A+ A GL +LH
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFLQ----RQTLEPHLALRLAVSAACGLAHLHVE 124
Query: 202 C-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
+P + H D K N+L+ + + I D GLA + ++
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V K +A+K++ GS+ E EF E + +L +V L G
Sbjct: 32 LGTGQFGVV-KYGKWRGQYDVAIKMI-KEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ + R + +I E M N L + L R+ + + E+ D+ + +EYL
Sbjct: 89 T--KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 141
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ N L++ K+ DFGL+R +D
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 122
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 123 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 177
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D K+ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 94
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 95 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 149
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD-----SSGSLQGEREFHNELSLASSLDCPHIVS 141
+G G F V + + + Q AVKI+D SS L E + E S+ L PHIV
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHIVE 92
Query: 142 LL-GFASDRRGRRLVLIYELMENRSLQDALLDRK------CEELMEWNKRFEIAIDIAKG 194
LL ++SD L +++E M+ L ++ R E + R I +
Sbjct: 93 LLETYSSDGM---LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEA 144
Query: 195 LEYLHHSCEPPVIHGDIKPSNILL---DGDFKAKIGDFGLARLKTEDLMIEG 243
L Y H + +IH D+KP +LL + K+G FG+A E ++ G
Sbjct: 145 LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG 193
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V K +A+K++ GS+ E EF E + +L +V L G
Sbjct: 32 LGTGQFGVV-KYGKWRGQYDVAIKMI-KEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
+ + R + +I E M N L + L R+ + + E+ D+ + +EYL
Sbjct: 89 T--KQRPIFIITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESK---QF 141
Query: 207 IHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H D+ N L++ K+ DFGL+R +D
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 149 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 207 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V+K S +A K++ + EL + + P+IV
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L R E+++ +++I + KGL Y
Sbjct: 130 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTY 181
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 182 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 23/169 (13%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F +LG G FG V+ SS +K ++ S + E+ + SLD P+I+
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 141 SLLGFASDRRGRRLV--------LIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA 192
+ D +V L+ ++ ++ AL + ELM+ +
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMK---------QMM 134
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGD---FKAKIGDFGLARLKTED 238
L Y H V+H D+KP NIL KI DFGLA L D
Sbjct: 135 NALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 443 DWASGDIPKSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
D+ ++ KS S+ + GT Y+APE + + KCD++S GV++ L++G P
Sbjct: 170 DFGLAELFKSDEHSTNAA--GTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFT 226
Query: 503 VTA 505
T+
Sbjct: 227 GTS 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G V A V SS + +AVK +D + E F NE+ + ++V + +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--Y 137
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E +E +L D + + E + + + + + L LH
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHAQG--- 190
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGL 231
VIH DIK +ILL D + K+ DFG
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGF 216
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G V A V SS + +AVK +D + E F NE+ + ++V + +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--Y 92
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E +E +L D + + E + + + + + L LH
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHAQG--- 145
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGL 231
VIH DIK +ILL D + K+ DFG
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGF 171
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 85 NRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE-----FHNELSLASSLDCPHI 139
+LG G +G VYKA+ +++ +A+K + L+ E E E+SL L +I
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRI----RLEHEEEGVPGTAIREVSLLKELQHRNI 95
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
+ L RL LI+E EN +D+ + M K F + G+ + H
Sbjct: 96 IELKSVI--HHNHRLHLIFEYAEND--LKKYMDKNPDVSMRVIKSF--LYQLINGVNFCH 149
Query: 200 -HSCEPPVIHGDIKPSNILLDGDFKA-----KIGDFGLAR 233
C +H D+KP N+LL + KIGDFGLAR
Sbjct: 150 SRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G V A V SS + +AVK +D + E F NE+ + ++V + +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--Y 94
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E +E +L D + + E + + + + + L LH
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHAQG--- 147
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGL 231
VIH DIK +ILL D + K+ DFG
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGF 173
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 103 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V+K S +A K++ + EL + + P+IV
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L R E+++ +++I + KGL Y
Sbjct: 95 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTY 146
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 147 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 72 NLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVK-ILDSSGSLQGEREFHNELSL 130
NL ++ + +G G +G V K + + +A+K L+S ++ E+ L
Sbjct: 18 NLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKL 77
Query: 131 ASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIA-- 188
L ++V+LL ++ +R L++E +++ L D EL +++
Sbjct: 78 LKQLRHENLVNLLEVC--KKKKRWYLVFEFVDHTILDDL-------ELFPNGLDYQVVQK 128
Query: 189 --IDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
I G+ + H +IH DIKP NIL+ K+ DFG AR
Sbjct: 129 YLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFAR 172
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIV 140
LG G FG V +A ++ + +AVK+L + R +EL + + ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCE-------------ELMEWNKRFEI 187
+LLG A + G L++I E + +L L ++ E + +
Sbjct: 86 NLLG-ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVK 247
+ +AKG+E+L IH D+ NILL KI DFGLAR D+ + + V+
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR----DIXKDPDXVR 197
Query: 248 KRD 250
K D
Sbjct: 198 KGD 200
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIV 140
LG G FG V +A ++ + +AVK+L + R +EL + + ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCE-------------ELMEWNKRFEI 187
+LLG A + G L++I E + +L L ++ E + +
Sbjct: 86 NLLG-ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVK 247
+ +AKG+E+L IH D+ NILL KI DFGLAR D+ + + V+
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVR 197
Query: 248 KRD 250
K D
Sbjct: 198 KGD 200
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + L R+ E + RF A I EY
Sbjct: 103 FLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D K+ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 103 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V+K S +A K++ + EL + + P+IV
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L R E+++ +++I + KGL Y
Sbjct: 87 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTY 138
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 139 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 171
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 456 SSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFERAN 515
S S GT Y++PE G S + D++S G+ ++ + GR P+ + M+ FE +
Sbjct: 177 SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLD 236
Query: 516 LI 517
I
Sbjct: 237 YI 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 87
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + + L R+ E + RF A I EY
Sbjct: 88 FLVKLE--FSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 142
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+L+D ++ DFG A+
Sbjct: 143 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I+ LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 103 IIHLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G V A V SS + +AVK +D + E F NE+ + ++V + +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--Y 83
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E +E +L D + + E + + + + + L LH
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHAQG--- 136
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGL 231
VIH DIK +ILL D + K+ DFG
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGF 162
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 21/183 (11%)
Query: 72 NLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQ---PLAVKILDSSGSLQGERE-FHNE 127
NL ++ + ++G G FG KA++ S++ +K ++ S ERE E
Sbjct: 17 NLYFQSMEKYVRLQKIGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRRE 73
Query: 128 LSLASSLDCPHIVSLLGFASDRRGRRLVLIY----ELMENRSLQDALLDRKCEELMEWNK 183
+++ +++ P+IV + +V+ Y +L + + Q +L ++ +++++W
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQE-DQILDW-- 130
Query: 184 RFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEG 243
+ I L+++H + ++H DIK NI L D ++GDFG+AR+ + +
Sbjct: 131 ----FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELAR 183
Query: 244 ECV 246
C+
Sbjct: 184 ACI 186
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G V A V SS + +AVK +D + E F NE+ + ++V + +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLF-NEVVIMRDYQHENVVEM--Y 87
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E +E +L D + + E + + + + + L LH
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIVTHTRMNE----EQIAAVCLAVLQALSVLHAQG--- 140
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGL 231
VIH DIK +ILL D + K+ DFG
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGF 166
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 76/172 (44%), Gaps = 27/172 (15%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILD-----SSGSLQGEREFHNELSLASSLDCPHIVS 141
+G G F V + + + Q AVKI+D SS L E + E S+ L PHIV
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE-DLKREASICHMLKHPHIVE 90
Query: 142 LL-GFASDRRGRRLVLIYELMENRSLQDALLDRK------CEELMEWNKRFEIAIDIAKG 194
LL ++SD L +++E M+ L ++ R E + R I +
Sbjct: 91 LLETYSSDGM---LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR-----QILEA 142
Query: 195 LEYLHHSCEPPVIHGDIKPSNILL---DGDFKAKIGDFGLARLKTEDLMIEG 243
L Y H + +IH D+KP +LL + K+G FG+A E ++ G
Sbjct: 143 LRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAG 191
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 90 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 148 SCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V++ ++ A K + + E E+ S L P +V+L
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAF 117
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
D +V+IYE M L + + D + M ++ E + KGL ++H E
Sbjct: 118 ED--DNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMH---ENNY 170
Query: 207 IHGDIKPSNILLDG--DFKAKIGDFGLA 232
+H D+KP NI+ + K+ DFGL
Sbjct: 171 VHLDLKPENIMFTTKRSNELKLIDFGLT 198
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT + APE G + D++S GVL +L+SG P
Sbjct: 212 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V+K S +A K++ + EL + + P+IV
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L R E+++ +++I + KGL Y
Sbjct: 68 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTY 119
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL------QVTASPMSEFER 513
S GT Y++PE G S + D++S G+ ++ + GR P+ + + PM+ FE
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFEL 221
Query: 514 ANLI 517
+ I
Sbjct: 222 LDYI 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V+K S +A K++ + EL + + P+IV
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L R E+++ +++I + KGL Y
Sbjct: 71 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTY 122
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 123 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 155
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFERANLI 517
GT Y++PE G S + D++S G+ ++ + GR P PM+ FE + I
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP----RPPMAIFELLDYI 218
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 92 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 150 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 67/154 (43%), Gaps = 11/154 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH---NELSLASSLDCPHIVSLL 143
+G G FG V A + AVK+L L+ + E H L ++ P +V L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL- 104
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
S + +L + + + L L +C +E RF A +IA L YLH
Sbjct: 105 -HFSFQTADKLYFVLDYINGGELFYHLQRERC--FLEPRARF-YAAEIASALGYLHSLN- 159
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
+++ D+KP NILLD + DFGL + E
Sbjct: 160 --IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIV 140
LG G FG V +A ++ + +AVK+L + R +EL + + ++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCE-------------ELMEWNKRFEI 187
+LLG A + G L++I E + +L L ++ E + +
Sbjct: 86 NLLG-ACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEGECVK 247
+ +AKG+E+L IH D+ NILL KI DFGLAR D+ + + V+
Sbjct: 145 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR----DIXKDPDXVR 197
Query: 248 KRD 250
K D
Sbjct: 198 KGD 200
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 79 ASFSPSNRLGHGGFGSVYKAVVPSSS---QPLAVKILD-SSGSLQGEREFHNELSLASSL 134
+ F LG G FG V+ S S Q A+K+L ++ ++ E + +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM--EWNKRFEIAIDIA 192
+ P IV L +A G+ L LI + + L R +E+M E + +F +A ++A
Sbjct: 84 NHPFIVKL-HYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELA 136
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
L++LH +I+ D+KP NILLD + K+ DFGL++
Sbjct: 137 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 174
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
S GTV Y+APE ++ D +SFGVL+ +++G P Q
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P+ +AVK+L S + + + +E+ + + +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK------C-------EELMEWNKRF 185
I++LLG + + L +I E +L++ L R+ C EE +
Sbjct: 81 IINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +A+G+EYL IH D+ N+L+ D KI DFGLAR
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 95 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 153 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 79 ASFSPSNRLGHGGFGSVYKAVVPSSS---QPLAVKILD-SSGSLQGEREFHNELSLASSL 134
+ F LG G FG V+ S S Q A+K+L ++ ++ E + +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM--EWNKRFEIAIDIA 192
+ P IV L +A G+ L LI + + L R +E+M E + +F +A ++A
Sbjct: 84 NHPFIVKL-HYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELA 136
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
L++LH +I+ D+KP NILLD + K+ DFGL++
Sbjct: 137 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 174
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
S GTV Y+APE ++ D +SFGVL+ +++G P Q
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D K+ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G FG V++ ++ A K + + E E+ S L P +V+L
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET-VRKEIQTMSVLRHPTLVNLHDAF 223
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
D +V+IYE M L + + D + M ++ E + KGL ++H E
Sbjct: 224 ED--DNEMVMIYEFMSGGELFEKVADEHNK--MSEDEAVEYMRQVCKGLCHMH---ENNY 276
Query: 207 IHGDIKPSNILLDG--DFKAKIGDFGLA 232
+H D+KP NI+ + K+ DFGL
Sbjct: 277 VHLDLKPENIMFTTKRSNELKLIDFGLT 304
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT + APE G + D++S GVL +L+SG P
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 123 EFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDA-----LLDRKCEE 177
+F NEL + + + + ++ G ++ + +IYE MEN S+ +LD+
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYD--EVYIIYEYMENDSILKFDEYFFVLDKNYTC 146
Query: 178 LMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
+ I + Y+H+ E + H D+KPSNIL+D + + K+ DFG
Sbjct: 147 FIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I E +L++ L ++R EE M +
Sbjct: 103 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + +I DFGLAR
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 79 ASFSPSNRLGHGGFGSVYKAVVPSSS---QPLAVKILD-SSGSLQGEREFHNELSLASSL 134
+ F LG G FG V+ S S Q A+K+L ++ ++ E + +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM--EWNKRFEIAIDIA 192
+ P IV L +A G+ L LI + + L R +E+M E + +F +A ++A
Sbjct: 85 NHPFIVKL-HYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLA-ELA 137
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
L++LH +I+ D+KP NILLD + K+ DFGL++
Sbjct: 138 LALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK 175
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
S GTV Y+APE ++ D +SFGVL+ +++G P Q
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V+K S +A K++ + EL + + P+IV
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L R E+++ +++I + KGL Y
Sbjct: 68 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTY 119
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P+ +AVK+L S + + + +E+ + + +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC-------------EELMEWNKRF 185
I++LLG A + G L +I E +L++ L R+ EE +
Sbjct: 85 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +A+G+EYL IH D+ N+L+ D KI DFGLAR
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P+ +AVK+L S + + + +E+ + + +
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC-------------EELMEWNKRF 185
I++LLG A + G L +I E +L++ L R+ EE +
Sbjct: 89 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +A+G+EYL IH D+ N+L+ D KI DFGLAR
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V+K S +A K++ + EL + + P+IV
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L R E+++ +++I + KGL Y
Sbjct: 68 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTY 119
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSL 134
R T + LG G F V + V + Q A I+++ S + ++ E + L
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKG 194
P+IV L S+ LI++L+ L + ++ R E+ + + I +
Sbjct: 68 KHPNIVRLHDSISEEGHH--YLIFDLVTGGELFEDIVAR------EYYSEADASHCIQQI 119
Query: 195 LEYLHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLARLKTEDLMIEGE 244
LE + H + V+H ++KP N+LL K K+ DFGLA + +EGE
Sbjct: 120 LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA------IEVEGE 166
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 69/162 (42%), Gaps = 11/162 (6%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG---EREFHNELSLA 131
R +F LG G FG V A V + AVK+L LQ E + L+
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDI 191
+ + P + L F + RL + E + L + +K E RF A +I
Sbjct: 79 LARNHPFLTQL--FCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARF-YAAEI 133
Query: 192 AKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
L +LH + +I+ D+K N+LLD + K+ DFG+ +
Sbjct: 134 ISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P+ +AVK+L S + + + +E+ + + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC-------------EELMEWNKRF 185
I++LLG A + G L +I E +L++ L R+ EE +
Sbjct: 96 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +A+G+EYL IH D+ N+L+ D KI DFGLAR
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 26/168 (15%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P+ +AVK+L S + + + +E+ + + +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC-------------EELMEWNKRF 185
I++LLG + + L +I E +L++ L R+ EE +
Sbjct: 88 IINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +A+G+EYL IH D+ N+L+ D KI DFGLAR
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 87 LGHGGFGSVY---KAVVPSSSQPLAVKILDSSGSLQGEREFHN---ELSLASSLDCPHIV 140
LG GG+G V+ K ++ + A+K+L + ++ ++ + E ++ + P IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L+ + + G +L LI E + L L + ME F +A +I+ L +LH
Sbjct: 85 DLI--YAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLA-EISMALGHLHQ 139
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+I+ D+KP NI+L+ K+ DFGL + D
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 112 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSAN---VLHRDLKPSNL 155
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 156 LLNTTXDLKIXDFGLARVADPD 177
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 26/168 (15%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P+ +AVK+L S + + + +E+ + + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRK------C-------EELMEWNKRF 185
I++LLG A + G L +I E +L++ L R+ C EE +
Sbjct: 96 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +A+G+EYL IH D+ N+L+ D KI DFGLAR
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V+K S +A K++ + EL + + P+IV
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L R E+++ +++I + KGL Y
Sbjct: 68 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTY 119
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 14/155 (9%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G F K V S+Q AVKI+ ++E L L P+IV L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEI-TALKLCEGH--PNIVKLHEVF 75
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
D+ LV+ EL+ L + + +K + E + I + + ++H + V
Sbjct: 76 HDQLHTFLVM--ELLNGGELFERI--KKKKHFSETEASY-IMRKLVSAVSHMH---DVGV 127
Query: 207 IHGDIKPSNILL---DGDFKAKIGDFGLARLKTED 238
+H D+KP N+L + + + KI DFG ARLK D
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD 162
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 458 TPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQ 502
TP T+ Y APE E CD++S GV++ ++SG+ P Q
Sbjct: 168 TPCF--TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V+K S +A K++ + EL + + P+IV
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L R E+++ +++I + KGL Y
Sbjct: 68 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTY 119
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 120 LREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ +GL+Y+H + VIH D+KPSN+L++ + + KIGDFG+AR
Sbjct: 168 LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 35 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 89
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 90 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 149
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 150 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 190
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 29 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 83
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 84 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 143
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 144 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 184
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 44 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 98
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 99 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 158
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 159 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 199
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%), Gaps = 3/43 (6%)
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ +GL+Y+H + VIH D+KPSN+L++ + + KIGDFG+AR
Sbjct: 167 LLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 104
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 165 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 24 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 78
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 79 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 138
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 139 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 179
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ + H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D ++ DFGLA+
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 50 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 104
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 164
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 165 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHNELSLASSLDCP 137
+F LG GGFG V V ++ + A K L+ + GE NE + ++
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+VSL +A + + L L+ LM L+ + E F A +I GLE
Sbjct: 245 FVVSL-AYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YAAEICCGLED 301
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEG 243
LH +++ D+KP NILLD +I D GLA E I+G
Sbjct: 302 LHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 87 LGHGGFGSVY---KAVVPSSSQPLAVKILDSSGSLQGEREFHN---ELSLASSLDCPHIV 140
LG GG+G V+ K ++ + A+K+L + ++ ++ + E ++ + P IV
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L+ + + G +L LI E + L L + ME F +A +I+ L +LH
Sbjct: 85 DLI--YAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLA-EISMALGHLHQ 139
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+I+ D+KP NI+L+ K+ DFGL + D
Sbjct: 140 KG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD 174
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 67 RRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN 126
+R YN+ ++ F + LG G +G V A + + +A+K ++
Sbjct: 3 KRIVYNI----SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58
Query: 127 ELSLASSLDCPHIVSLLGFA---SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK 183
E+ + +I+++ S + +I ELM+ L R M +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSDD 112
Query: 184 RFEIAI-DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
+ I + ++ LH S VIH D+KPSN+L++ + K+ DFGLAR+ E
Sbjct: 113 HIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 82
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 143 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 132 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSAN---VLHRDLKPSNL 175
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 176 LLNTTXDLKICDFGLARVADPD 197
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 67 RRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN 126
+R YN+ ++ F + LG G +G V A + + +A+K ++
Sbjct: 3 KRIVYNI----SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58
Query: 127 ELSLASSLDCPHIVSLLGFA---SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK 183
E+ + +I+++ S + +I ELM+ L R M +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSDD 112
Query: 184 RFEIAI-DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
+ I + ++ LH S VIH D+KPSN+L++ + K+ DFGLAR+ E
Sbjct: 113 HIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 28 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 82
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 83 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 142
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 143 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 183
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF- 145
+G G +G V++ + +AVKI S + E+ + E L +++ H ++LGF
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFSS----RDEKSWFRETELYNTVMLRH-ENILGFI 68
Query: 146 ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
ASD R +L LI E SL D L + + I + IA GL +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIE 124
Query: 202 C-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
+P + H D+K NIL+ + + I D GLA + ++
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 21 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 75
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 76 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 135
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 136 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 176
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 116 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSAN---VLHRDLKPSNL 159
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 160 LLNTTXDLKICDFGLARVADPD 181
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF- 145
+G G +G V++ + +AVKI S + E+ + E L +++ H ++LGF
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVKIFSS----RDEKSWFRETELYNTVMLRH-ENILGFI 68
Query: 146 ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
ASD R +L LI E SL D L + + I + IA GL +LH
Sbjct: 69 ASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIE 124
Query: 202 C-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
+P + H D+K NIL+ + + I D GLA + ++
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 17/175 (9%)
Query: 67 RRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN 126
+R YN+ ++ F + LG G +G V A + + +A+K ++
Sbjct: 3 KRIVYNI----SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR 58
Query: 127 ELSLASSLDCPHIVSLLGFA---SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNK 183
E+ + +I+++ S + +I ELM+ L R M +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSDD 112
Query: 184 RFEIAI-DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
+ I + ++ LH S VIH D+KPSN+L++ + K+ DFGLAR+ E
Sbjct: 113 HIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 112 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSAN---VLHRDLKPSNL 155
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 156 LLNTTXDLKICDFGLARVADPD 177
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 8/166 (4%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHNELSLASSLDCP 137
+F LG GGFG V V ++ + A K L+ + GE NE + ++
Sbjct: 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR 244
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+VSL +A + + L L+ LM L+ + E F A +I GLE
Sbjct: 245 FVVSL-AYAYETKDA-LCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YAAEICCGLED 301
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMIEG 243
LH +++ D+KP NILLD +I D GLA E I+G
Sbjct: 302 LHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG 344
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 52 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 106
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 107 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 166
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 167 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 207
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 112 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSAN---VLHRDLKPSNL 155
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 156 LLNTTXDLKICDFGLARVADPD 177
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 54 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 108
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 109 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 168
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 169 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 209
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDS-SGSLQGERE------FHNELSLASSLDC 136
S LG G G V A + + +A+KI+ ++ RE E+ + L+
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P I+ + F D +VL ELME L D ++ K L E + + ++
Sbjct: 75 PCIIKIKNFF-DAEDYYIVL--ELMEGGELFDKVVGNK--RLKEATCKLYF-YQMLLAVQ 128
Query: 197 YLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
YLH E +IH D+KP N+LL D KI DFG +++ E ++ C
Sbjct: 129 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 116 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSAN---VLHRDLKPSNL 159
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 160 LLNTTXDLKICDFGLARVADPD 181
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 114 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 157
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 158 LLNTTCDLKICDFGLARVADPD 179
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K LQ +R + EL + L
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKL 70
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 131 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S+ LG G +V++ + A+K+ ++ L+ E + L+ +IV L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R VLI E SL L + + ++ + D+ G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 204 PPVIHGDIKPSNILL----DGDFKAKIGDFGLARLKTED 238
++H +IKP NI+ DG K+ DFG AR +D
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 114 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 157
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 158 LLNTTCDLKICDFGLARVADPD 179
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K LQ +R + EL + L
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKL 70
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 131 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIV 140
LG G FG V +A + +AVK+L S+ + +EL + S L +IV
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC-------------EELMEWNKRFEI 187
+LLG + G +++I E L + L ++ EE +
Sbjct: 114 NLLGACT--HGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ +A+G+ +L IH D+ N+LL AKIGDFGLAR
Sbjct: 172 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG + +++ Y N L++ L ++R EE M +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGN--LREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K LQ +R + EL + L
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKL 70
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 131 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 95 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 149
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 150 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 209
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 210 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 250
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQ +R + EL + L
Sbjct: 20 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQDKRFKNRELQIMRKL 74
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 75 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 134
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 135 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 175
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K LQ +R + EL + L
Sbjct: 17 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKL 71
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 72 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 131
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 132 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 172
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 110 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 153
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 154 LLNTTCDLKICDFGLARVADPD 175
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K LQG+ + EL + L
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKNRELQIMRKL 70
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 131 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDS-SGSLQGERE------FHNELSLASSLDC 136
S LG G G V A + + +A+KI+ ++ RE E+ + L+
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P I+ + F D +VL ELME L D ++ K L E + + ++
Sbjct: 75 PCIIKIKNFF-DAEDYYIVL--ELMEGGELFDKVVGNK--RLKEATCKLYF-YQMLLAVQ 128
Query: 197 YLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
YLH E +IH D+KP N+LL D KI DFG +++ E ++ C
Sbjct: 129 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 75/172 (43%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K LQG+ + EL + L
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQGKAFKNRELQIMRKL 70
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 131 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 112 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 155
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 156 LLNTTCDLKICDFGLARVADPD 177
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 117 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 160
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 161 LLNTTCDLKICDFGLARVADPD 182
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P+ +AVK+L S + + + +E+ + + +
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC-------------EELMEWNKRF 185
I++LLG A + G L +I E +L++ L R+ EE +
Sbjct: 137 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +A+G+EYL IH D+ N+L+ D KI DFGLAR
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDS-SGSLQGERE------FHNELSLASSLDC 136
S LG G G V A + + +A+KI+ ++ RE E+ + L+
Sbjct: 15 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 74
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P I+ + F D +VL ELME L D ++ K L E + + ++
Sbjct: 75 PCIIKIKNFF-DAEDYYIVL--ELMEGGELFDKVVGNK--RLKEATCKLYF-YQMLLAVQ 128
Query: 197 YLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
YLH E +IH D+KP N+LL D KI DFG +++ E ++ C
Sbjct: 129 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 177
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 118 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 161
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 162 LLNTTCDLKICDFGLARVADPD 183
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 109 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 152
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 153 LLNTTCDLKICDFGLARVADPD 174
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 116 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 159
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 160 LLNTTCDLKICDFGLARVADPD 181
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 116 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 159
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 160 LLNTTCDLKICDFGLARVADPD 181
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 132 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSAN---VLHRDLKPSNL 175
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 176 LLNTTCDLKICDFGLARVADPD 197
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P+ +AVK+L S + + + +E+ + + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC-------------EELMEWNKRF 185
I++LLG A + G L +I E +L++ L R+ EE +
Sbjct: 96 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +A+G+EYL IH D+ N+L+ D KI DFGLAR
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 29/172 (16%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K + LQG+ + EL + L
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-----LQGKAFKNRELQIMRKL 70
Query: 135 DCPHIVSLLGF------ASDRRGRRLVL------IYELMENRSLQDALLDRKCEELMEWN 182
D +IV L F D LVL +Y + + S L +L +
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ 130
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 131 --------LFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 116 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 159
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 160 LLNTTCDLKICDFGLARVADPD 181
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDS-SGSLQGERE------FHNELSLASSLDC 136
S LG G G V A + + +A+KI+ ++ RE E+ + L+
Sbjct: 14 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 73
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P I+ + F D +VL ELME L D ++ K L E + + ++
Sbjct: 74 PCIIKIKNFF-DAEDYYIVL--ELMEGGELFDKVVGNK--RLKEATCKLYF-YQMLLAVQ 127
Query: 197 YLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
YLH E +IH D+KP N+LL D KI DFG +++ E ++ C
Sbjct: 128 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 117 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 160
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 161 LLNTTCDLKICDFGLARVADPD 182
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 110 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 153
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 154 LLNTTCDLKICDFGLARVADPD 175
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 26/168 (15%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P+ +AVK+L S + + + +E+ + + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC-------------EELMEWNKRF 185
I++LLG A + G L +I E +L++ L R+ EE +
Sbjct: 96 IINLLG-ACTQDGP-LYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +A+G+EYL IH D+ N+L+ D KI DFGLAR
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 87 LGHGGFGSVYKAVV-----PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPHIV 140
LG G FG V +A + +AVK+L S+ + +EL + S L +IV
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM--------------------- 179
+LLG + G +++I E L + L RK E ++
Sbjct: 99 NLLGACT--HGGPVLVITEYCCYGDLLN-FLRRKAEAMLGPSLAPGQDPEGLDKEDGRPL 155
Query: 180 EWNKRFEIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
E + +A+G+ +L +C IH D+ N+LL AKIGDFGLAR
Sbjct: 156 ELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSL 134
R S++ + +G+G FG VY+A + S + +A+K LQ +R + EL + L
Sbjct: 16 RPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIK-----KVLQDKRFKNRELQIMRKL 70
Query: 135 DCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIA------ 188
D +IV L F ++ V+ L+ LD E + + + A
Sbjct: 71 DHCNIVRLRYFFYSSGEKKDVVYLNLV---------LDYVPETVYRVARHYSRAKQTLPV 121
Query: 189 -------IDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
+ + L Y+H + H DIKP N+LLD D K+ DFG A+
Sbjct: 122 IYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 171
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+ L S + L ++ E + L R+ E + RF A I EY
Sbjct: 103 FLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D K+ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 73 LIRRATA-SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA 131
L++R A + +G G +G V++ + +AVKI S + E+ + E L
Sbjct: 30 LVQRTVARQITLLECVGKGRYGEVWRG--SWQGENVAVKIFSS----RDEKSWFRETELY 83
Query: 132 SSLDCPHIVSLLGF-ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
+++ H ++LGF ASD R +L LI E SL D L + +
Sbjct: 84 NTVMLRH-ENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLR 138
Query: 187 IAIDIAKGLEYLHHSC-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTE 237
I + IA GL +LH +P + H D+K NIL+ + + I D GLA + ++
Sbjct: 139 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 120 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 163
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 164 LLNTTCDLKICDFGLARVADPD 185
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 112 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSA---NVLHRDLKPSNL 155
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 156 LLNTTCDLKICDFGLARVADPD 177
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 16/82 (19%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++ + L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 114 LYKLLKTQHLSN---DHICYFLYQ----------ILRGLKYIHSAN---VLHRDLKPSNL 157
Query: 217 LLDGDFKAKIGDFGLARLKTED 238
LL+ KI DFGLAR+ D
Sbjct: 158 LLNTTSDLKICDFGLARVADPD 179
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDS-SGSLQGERE------FHNELSLASSLDC 136
S LG G G V A + + +A+KI+ ++ RE E+ + L+
Sbjct: 21 SKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNH 80
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P I+ + F D +VL ELME L D ++ K L E + + ++
Sbjct: 81 PCIIKIKNFF-DAEDYYIVL--ELMEGGELFDKVVGNK--RLKEATCKLYF-YQMLLAVQ 134
Query: 197 YLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
YLH E +IH D+KP N+LL D KI DFG +++ E ++ C
Sbjct: 135 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 183
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 7/159 (4%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
S+ LG G +V++ + A+K+ ++ L+ E + L+ +IV L
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ R VLI E SL L + + ++ + D+ G+ +L E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 204 PPVIHGDIKPSNILL----DGDFKAKIGDFGLARLKTED 238
++H +IKP NI+ DG K+ DFG AR +D
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+V L S + L ++ E + L R+ E + RF A I EY
Sbjct: 102 FLVKLE--FSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D ++ DFG A+
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLLGF 145
+G G +G VY A ++++ +A+K ++ L + E+++ + L +I+ L
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDL 95
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDR--KCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
+ +Y ++E + D+ L + K + I ++ G +++H E
Sbjct: 96 IIPEDLLKFDELYIVLE---IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH---E 149
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+IH D+KP+N LL+ D KI DFGLAR D
Sbjct: 150 SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 154 LVLIYELMENRSLQDALLDRKCE-ELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIK 212
L + +L +L+D ++R+C E E I I IA+ +E+LH ++H D+K
Sbjct: 136 LYIQMQLCRKENLKD-WMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLK 191
Query: 213 PSNILLDGDFKAKIGDFGLARLKTED 238
PSNI D K+GDFGL +D
Sbjct: 192 PSNIFFTMDDVVKVGDFGLVTAMDQD 217
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 21/109 (19%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTASPMSEFERANLISWARQ 522
GT Y++PE G S K D++S G+++ L+ S ++ ER +I+ R
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL---------YSFSTQMERVRIITDVRN 288
Query: 523 LAYNGKLLDLVDPSIHSLDKDXXXXXXXXXXXXXXRSPSKRLTMKDIVE 571
L + L P H + +D SP++R DI+E
Sbjct: 289 LKF-PLLFTQKYPQEHMMVQDMLSP-----------SPTERPEATDIIE 325
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
I +GL+Y+H + V+H D+KPSN+LL+ KI DFGLAR+ D
Sbjct: 137 ILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 69/158 (43%), Gaps = 23/158 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLDCPHIVS 141
LG G F V K S+ A K + S R E E+S+ + P+I++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIAKGLEYL 198
L +R +VLI EL+ L D L ++ EE + K+ I G+ YL
Sbjct: 80 LHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGVNYL 131
Query: 199 HHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
H + H D+KP NI LLD + K+ DFGLA
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT ++APE L + D++S GV+ +L+SG P
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+ L S + L ++ E + L R+ E + RF A I EY
Sbjct: 103 FLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D K+ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFH--NELSLASSLDCP 137
F LG G FG V + A+KILD ++ ++ H NE + +++ P
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 102
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+ L S + L ++ E + L R+ E + RF A I EY
Sbjct: 103 FLTKLE--FSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH +I+ D+KP N+++D K+ DFG A+
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G G V K S +A K++ + EL + + P+IV
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 141 SLLG-FASDRRGRRLVLIYELMENRSLQDALLDRK--CEELMEWNKRFEIAIDIAKGLEY 197
G F SD + + E M+ SL L + K EE++ +++I + +GL Y
Sbjct: 78 GFYGAFYSDGE---ISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAY 129
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
L + ++H D+KPSNIL++ + K+ DFG++
Sbjct: 130 LREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS 162
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
S GT Y+APE G S + D++S G+ ++ L GR P+
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDS-SGSLQGERE------FHNELSLASSLDC 136
S LG G G V A + + +A++I+ ++ RE E+ + L+
Sbjct: 154 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 213
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P I+ + F D +VL ELME L D ++ K L E + + ++
Sbjct: 214 PCIIKIKNFF-DAEDYYIVL--ELMEGGELFDKVVGNK--RLKEATCKLYF-YQMLLAVQ 267
Query: 197 YLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
YLH E +IH D+KP N+LL D KI DFG +++ E ++ C
Sbjct: 268 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 316
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 19/172 (11%)
Query: 84 SNRLGHGGFGSVYKAVVPSSSQPLAVKILDS-SGSLQGERE------FHNELSLASSLDC 136
S LG G G V A + + +A++I+ ++ RE E+ + L+
Sbjct: 140 SKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNH 199
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P I+ + F D +VL ELME L D ++ K L E + + ++
Sbjct: 200 PCIIKIKNFF-DAEDYYIVL--ELMEGGELFDKVVGNK--RLKEATCKLYF-YQMLLAVQ 253
Query: 197 YLHHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
YLH E +IH D+KP N+LL D KI DFG +++ E ++ C
Sbjct: 254 YLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC 302
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F + LG G VY+ + +P A+K+L + ++ E+ + L P+I+
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD---KKIVRTEIGVLLRLSHPNII 111
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKR--FEIAIDIAKGLEYL 198
L LVL EL+ L D ++++ +++R + I + + YL
Sbjct: 112 KLKEIFETPTEISLVL--ELVTGGELFDRIVEKG-----YYSERDAADAVKQILEAVAYL 164
Query: 199 HHSCEPPVIHGDIKPSNILLDG---DFKAKIGDFGLARLKTEDLMIEGEC 245
H E ++H D+KP N+L D KI DFGL+++ ++++ C
Sbjct: 165 H---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC 211
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 16/78 (20%)
Query: 157 IYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNI 216
+Y+L++++ L + D C L + I +GL+Y+H + V+H D+KPSN+
Sbjct: 132 LYKLLKSQQLSN---DHICYFLYQ----------ILRGLKYIHSAN---VLHRDLKPSNL 175
Query: 217 LLDGDFKAKIGDFGLARL 234
L++ KI DFGLAR+
Sbjct: 176 LINTTCDLKICDFGLARI 193
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 87 LGHGGFGSVYKAVV-------PSSSQPLAVKILDSSGSLQGEREFHNELSLASSL-DCPH 138
LG G FG V A P + +AVK+L + + + +E+ + + +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDAL-------------LDRKCEELMEWNKRF 185
I++LLG A + G L +I +L++ L ++R EE M +
Sbjct: 103 IINLLG-ACTQDGP-LYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 186 EIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+A+G+EYL C IH D+ N+L+ + KI DFGLAR
Sbjct: 161 SCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G V A + +A+K ++ E E+ S P+IVS +
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY--YT 75
Query: 147 SDRRGRRLVLIYELMENRSLQDAL--LDRKCEE---LMEWNKRFEIAIDIAKGLEYLHHS 201
S L L+ +L+ S+ D + + K E +++ + I ++ +GLEYLH +
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ IH D+K NILL D +I DFG++
Sbjct: 136 GQ---IHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G V A + +A+K ++ E E+ S P+IVS +
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY--YT 80
Query: 147 SDRRGRRLVLIYELMENRSLQDAL--LDRKCEE---LMEWNKRFEIAIDIAKGLEYLHHS 201
S L L+ +L+ S+ D + + K E +++ + I ++ +GLEYLH +
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 202 CEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ IH D+K NILL D +I DFG++
Sbjct: 141 GQ---IHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLDCPHIVS 141
LG G F V K S+ A K + + R + E+S+ + P++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIAKGLEYL 198
L ++ ++LI EL+ L D L +++ EE E+ K+ I G+ YL
Sbjct: 79 LHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILNGVYYL 130
Query: 199 HHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
H + H D+KP NI LLD + + KI DFGLA
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLDCPHIVS 141
LG G F V K S+ A K + + R + E+S+ + P++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIAKGLEYL 198
L ++ ++LI EL+ L D L +++ EE E+ K+ I G+ YL
Sbjct: 79 LHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILNGVYYL 130
Query: 199 HHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
H + H D+KP NI LLD + + KI DFGLA
Sbjct: 131 H---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 73 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 125 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 43/167 (25%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G G +G VY A ++ + +A+K + R F + +DC I+ +
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIK--------KVNRMFED------LIDCKRILREITIL 79
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELM--------EWNKRFEIAI--------- 189
+ + ++ +Y+L+ + D LL K +EL + K F+ I
Sbjct: 80 NRLKSDYIIRLYDLI----IPDDLL--KFDELYIVLEIADSDLKKLFKTPIFLTEEHIKT 133
Query: 190 ---DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
++ G ++H S +IH D+KP+N LL+ D K+ DFGLAR
Sbjct: 134 ILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 78 TASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDC 136
T + LG G F V + + + Q A KI+++ S + ++ E + L
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV L S+ LV ++L+ L + ++ R E+ + + I + LE
Sbjct: 63 PNIVRLHDSISEEGFHYLV--FDLVTGGELFEDIVAR------EYYSEADASHCIQQILE 114
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLA 232
++H ++H D+KP N+LL K K+ DFGLA
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 23/158 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLDCPHIVS 141
LG G F V K S+ A K + + R + E+S+ + P++++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIAKGLEYL 198
L ++ ++LI EL+ L D L +++ EE E+ K+ I G+ YL
Sbjct: 79 LHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILNGVYYL 130
Query: 199 HHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
H + H D+KP NI LLD + + KI DFGLA
Sbjct: 131 HSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 12/159 (7%)
Query: 78 TASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDC 136
T + LG G F V + + + Q A KI+++ S + ++ E + L
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV L S+ LV ++L+ L + ++ R E+ + + I + LE
Sbjct: 63 PNIVRLHDSISEEGFHYLV--FDLVTGGELFEDIVAR------EYYSEADASHCIQQILE 114
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLA 232
++H ++H D+KP N+LL K K+ DFGLA
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA 153
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 14/157 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV---SLL 143
LG GG G V+ AV + +A+K + + Q + E+ + LD +IV +L
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVFEIL 77
Query: 144 GFASDRRGRRLVLIYELMENRSLQDAL---LDRKCEE--LMEWNKRFEIAIDIAKGLEYL 198
G + + + + EL +Q+ + L E+ L+E + R + +GL+Y+
Sbjct: 78 GPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQLLRGLKYI 136
Query: 199 HHSCEPPVIHGDIKPSNILLDG-DFKAKIGDFGLARL 234
H + V+H D+KP+N+ ++ D KIGDFGLAR+
Sbjct: 137 HSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 12/146 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE-REFHNELSLASSLDCPHIVSLLGF 145
+G G FG VY +A++++D + + + F E+ ++V +G
Sbjct: 41 IGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
L +I L + R+L + D K +++ NK +IA +I KG+ YLH
Sbjct: 98 CMS--PPHLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHAKG--- 150
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGL 231
++H D+K N+ D K I DFGL
Sbjct: 151 ILHKDLKSKNVFYDNG-KVVITDFGL 175
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 86 RLGHGGFGSVYKAV--VPSS-SQPLAVKIL--DSSGSLQGEREFHNELSLASSLDCPHIV 140
+LG G FG V + PS + +AVK L D + +F E++ SLD +++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L G + ++ EL SL D L + L+ R+ A+ +A+G+ YL
Sbjct: 79 RLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES 133
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH D+ N+LL KIGDFGL R
Sbjct: 134 K---RFIHRDLAARNLLLATRDLVKIGDFGLMR 163
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 28/181 (15%)
Query: 71 YNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQP---LAVKILDSSGSLQGEREFHNE 127
Y + + + F +++G G F SVY A P +A+K L + +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---------HP 63
Query: 128 LSLASSLDCPHIV----SLLGFA-SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWN 182
+ +A+ L C + +++G R+ +V+ +E+ S D L +E+ E+
Sbjct: 64 IRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREY- 122
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLARLKTEDLMI 241
+++ K L+ +H ++H D+KPSN L + K + DFGLA+ T D I
Sbjct: 123 -----MLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQ-GTHDTKI 173
Query: 242 E 242
E
Sbjct: 174 E 174
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 73 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 125 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+LG G + V++A+ ++++ +AVKIL + +RE L + P+I++L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKRE---IKILENLRGGPNIITLADI 100
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
D R L++E + N + + + L +++ RF + +I K L+Y H
Sbjct: 101 VKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYM-YEILKALDYCHSMG--- 151
Query: 206 VIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
++H D+KP N+L+D + K ++ D+GLA
Sbjct: 152 IMHRDVKPHNVLIDHEHRKLRLIDWGLAEF 181
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 72 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 123
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 124 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 73 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 125 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 73 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 125 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 72 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 123
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 124 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 175 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 73 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 125 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 95 GIC---EAESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 144
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
S +H D+ N+LL AKI DFGL++
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 95 GIC---EAESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 144
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
S +H D+ N+LL AKI DFGL++
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 175
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 73 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 125 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 75 GIC---EAESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 124
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
E +H D+ N+LL AKI DFGL++
Sbjct: 125 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 155
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDC-PHIVSLLGF 145
L GGF VY+A S + A+K L S+ + R E+ L P+IV
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEE-EKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 146 AS------DRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
AS D +L+ EL + + L + L + + + +I + ++++H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQ-LVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+PP+IH D+K N+LL K+ DFG A
Sbjct: 154 RQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 86 RLGHGGFGSVYKAV--VPSS-SQPLAVKIL--DSSGSLQGEREFHNELSLASSLDCPHIV 140
+LG G FG V + PS + +AVK L D + +F E++ SLD +++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L G + ++ EL SL D L + L+ R+ A+ +A+G+ YL
Sbjct: 79 RLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES 133
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH D+ N+LL KIGDFGL R
Sbjct: 134 K---RFIHRDLAARNLLLATRDLVKIGDFGLMR 163
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL-- 143
RLG GGFG V + + + + +A+K S + + E+ + L+ P++VS
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 144 --GFASDRRGRRLVLIYELMENRSLQDALLD-RKCEELMEWNKRFEIAIDIAKGLEYLHH 200
G +L E E L+ L C L E R ++ DI+ L YLH
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLH- 138
Query: 201 SCEPPVIHGDIKPSNILLDGD---FKAKIGDFGLAR 233
E +IH D+KP NI+L KI D G A+
Sbjct: 139 --ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL-- 143
RLG GGFG V + + + + +A+K S + + E+ + L+ P++VS
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 144 --GFASDRRGRRLVLIYELMENRSLQDALLD-RKCEELMEWNKRFEIAIDIAKGLEYLHH 200
G +L E E L+ L C L E R ++ DI+ L YLH
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLH- 139
Query: 201 SCEPPVIHGDIKPSNILLDGD---FKAKIGDFGLAR 233
E +IH D+KP NI+L KI D G A+
Sbjct: 140 --ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 173
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 73 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 125 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 85 GICE---AESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 134
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
E +H D+ N+LL AKI DFGL++
Sbjct: 135 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 165
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 73 GIC---EAESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 122
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
E +H D+ N+LL AKI DFGL++
Sbjct: 123 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 153
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 86 RLGHGGFGSVYKAV--VPSS-SQPLAVKIL--DSSGSLQGEREFHNELSLASSLDCPHIV 140
+LG G FG V + PS + +AVK L D + +F E++ SLD +++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L G + ++ EL SL D L + L+ R+ A+ +A+G+ YL
Sbjct: 75 RLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES 129
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH D+ N+LL KIGDFGL R
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 86 RLGHGGFGSVYKAV--VPSS-SQPLAVKIL--DSSGSLQGEREFHNELSLASSLDCPHIV 140
+LG G FG V + PS + +AVK L D + +F E++ SLD +++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L G + ++ EL SL D L + L+ R+ A+ +A+G+ YL
Sbjct: 75 RLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES 129
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH D+ N+LL KIGDFGL R
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 86 RLGHGGFGSVYKAV--VPSS-SQPLAVKIL--DSSGSLQGEREFHNELSLASSLDCPHIV 140
+LG G FG V + PS + +AVK L D + +F E++ SLD +++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L G + ++ EL SL D L + L+ R+ A+ +A+G+ YL
Sbjct: 85 RLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES 139
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH D+ N+LL KIGDFGL R
Sbjct: 140 K---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 79 GIC---EAESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 128
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
E +H D+ N+LL AKI DFGL++
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 79 GIC---EAESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 128
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
E +H D+ N+LL AKI DFGL++
Sbjct: 129 ---ESNFVHRDLAARNVLLVTQHYAKISDFGLSK 159
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 73 HPNVITLHEVYENKTD--VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 125 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 86 RLGHGGFGSVYKAV--VPSS-SQPLAVKIL--DSSGSLQGEREFHNELSLASSLDCPHIV 140
+LG G FG V + PS + +AVK L D + +F E++ SLD +++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L G + ++ EL SL D L + L+ R+ A+ +A+G+ YL
Sbjct: 75 RLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES 129
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH D+ N+LL KIGDFGL R
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 86 RLGHGGFGSVYKAV--VPSS-SQPLAVKIL--DSSGSLQGEREFHNELSLASSLDCPHIV 140
+LG G FG V + PS + +AVK L D + +F E++ SLD +++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L G + ++ EL SL D L + L+ R+ A+ +A+G+ YL
Sbjct: 85 RLYGVVLTPPMK---MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES 139
Query: 201 SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
IH D+ N+LL KIGDFGL R
Sbjct: 140 K---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 93 GIC---EAESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 142
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
S +H D+ N+LL AKI DFGL++
Sbjct: 143 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 173
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV LL D+ + LI+E + N + L +++ R+ I ++ K L+
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYI-YELLKALD 140
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 141 YCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE--FHNELSLA 131
+R + +G G FG V S+ + A+K+L ++ F E +
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 123
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDI 191
+ + P +V L F + + R L ++ E M L + + + E +W RF A ++
Sbjct: 124 AFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KW-ARFYTA-EV 177
Query: 192 AKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L+ +H IH D+KP N+LLD K+ DFG
Sbjct: 178 VLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 213
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 454 GISSTPSMRGTVCYIAPEY----GGGGLLSEKCDVYSFGVLILVLISGRRPL 501
G+ + GT YI+PE GG G +CD +S GV + ++ G P
Sbjct: 222 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV LL D+ + LI+E + N + L +++ R+ I ++ K L+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYI-YELLKALD 139
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 140 YCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV LL D+ + LI+E + N + L +++ R+ I ++ K L+
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYI-YELLKALD 160
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 161 YCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 196
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 130 LASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAI 189
L + + P+IV LL D+ + LI+E + N + L +++ R+ I
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYIY- 132
Query: 190 DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
++ K L+Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 133 ELLKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV LL D+ + LI+E + N + L +++ R+ I ++ K L+
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYI-YELLKALD 141
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 142 YCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 177
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV LL D+ + LI+E + N + L +++ R+ I ++ K L+
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYI-YELLKALD 140
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 141 YCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 19/157 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE--FHNELSLASSLDCPH 138
F +G G FG V + ++ + A+KIL+ L+ F E + + DC
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEI-----AIDIAK 193
I +L D LV+ Y + + LL + ++L E RF I AID
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLL---TLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 194 GLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y +H DIKP N+LLD + ++ DFG
Sbjct: 193 QLHY---------VHRDIKPDNVLLDVNGHIRLADFG 220
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV LL D+ + LI+E + N + L +++ R+ I ++ K L+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYIY-ELLKALD 139
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 140 YCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHNELSLA 131
+R + +G G FG V S+ + A+K+L ++ F E +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 128
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDI 191
+ + P +V L F + + R L ++ E M L + + + E +W RF A ++
Sbjct: 129 AFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KW-ARFYTA-EV 182
Query: 192 AKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L+ +H IH D+KP N+LLD K+ DFG
Sbjct: 183 VLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 218
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 454 GISSTPSMRGTVCYIAPEY----GGGGLLSEKCDVYSFGVLILVLISGRRPL 501
G+ + GT YI+PE GG G +CD +S GV + ++ G P
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV LL D+ + LI+E + N + L +++ R+ I ++ K L+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYIY-ELLKALD 139
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 140 YCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 74 IRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHNELSLA 131
+R + +G G FG V S+ + A+K+L ++ F E +
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 128
Query: 132 SSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDI 191
+ + P +V L F + + R L ++ E M L + + + E +W RF A ++
Sbjct: 129 AFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KW-ARFYTA-EV 182
Query: 192 AKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L+ +H IH D+KP N+LLD K+ DFG
Sbjct: 183 VLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFG 218
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 454 GISSTPSMRGTVCYIAPEY----GGGGLLSEKCDVYSFGVLILVLISGRRPL 501
G+ + GT YI+PE GG G +CD +S GV + ++ G P
Sbjct: 227 GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV LL D+ + LI+E + N + L +++ R+ I ++ K L+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYIY-ELLKALD 139
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 140 YCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE--FHNELSLASSLDCPHIVSLLG 144
+G G FG V + ++ + A+KIL+ L+ F E + + D I +L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 145 FASDRRGRRLVLIYELMENR-SLQDALLDRKCEELMEWN-KRFEIAIDIAKGLEYLHHSC 202
D LV+ Y + + +L DR EE+ + IAID L Y
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY----- 196
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
+H DIKP NIL+D + ++ DFG ED
Sbjct: 197 ----VHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+IV LL D+ + LI+E + N + L +++ R+ I ++ K L+
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLY-----PTLTDYDIRYYIY-ELLKALD 139
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 140 YCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
F LG G F V A ++ + AVK + E NE+++ + +IV
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
+L L L+ +L+ L D ++++ + + +D + YLH
Sbjct: 84 ALEDIY--ESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD---AVYYLHR 138
Query: 201 SCEPPVIHGDIKPSNILL---DGDFKAKIGDFGLARLKTEDLMIEGEC 245
++H D+KP N+L D + K I DFGL++++ + ++ C
Sbjct: 139 M---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTAC 183
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 443 DWASGDIPKSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
D+ + G + ST GT Y+APE S+ D +S GV+ +L+ G P
Sbjct: 166 DFGLSKMEGKGDVMSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 73 LIRRATA-SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA 131
L++R A + +G G FG V++ + +AVKI S + ER + E +
Sbjct: 22 LVQRTIARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSS----REERSWFREAEIY 75
Query: 132 SSLDCPHIVSLLGF-ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
++ H ++LGF A+D + +L L+ + E+ SL D L+R + +
Sbjct: 76 QTVMLRH-ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTV---EGMIK 130
Query: 187 IAIDIAKGLEYLHHSC-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+A+ A GL +LH +P + H D+K NIL+ + I D GLA
Sbjct: 131 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHNELSLASSLDCPHIVSLLG 144
+G G FG V +S + A+K+L ++ F E + + + P +V L
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL-- 140
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
F + + + L ++ E M L + + + E +W K + + +A L+ +H
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE--KWAKFYTAEVVLA--LDAIHSMG-- 194
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDLMI 241
+IH D+KP N+LLD K+ DFG E M+
Sbjct: 195 -LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV 230
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 454 GISSTPSMRGTVCYIAPEY----GGGGLLSEKCDVYSFGVLILVLISGRRPL 501
G+ + GT YI+PE GG G +CD +S GV + ++ G P
Sbjct: 228 GMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 19/157 (12%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGERE--FHNELSLASSLDCPH 138
F +G G FG V + ++ + A+KIL+ L+ F E + + DC
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEI-----AIDIAK 193
I +L D LV+ Y + + LL + ++L E RF I AID
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLL---TLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 194 GLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFG 230
L Y +H DIKP N+LLD + ++ DFG
Sbjct: 209 QLHY---------VHRDIKPDNVLLDVNGHIRLADFG 236
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 23/164 (14%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLD 135
+ LG G F V K S+ A K + + R + E+S+ +
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 136 CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIA 192
P++++L ++ ++LI EL+ L D L +++ EE E+ K+ I
Sbjct: 73 HPNVITLHEVYENKTD--VILIGELVAGGELFDFLAEKESLTEEEATEFLKQ------IL 124
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
G+ YLH + H D+KP NI LLD + + KI DFGLA
Sbjct: 125 NGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 176 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 75/174 (43%), Gaps = 33/174 (18%)
Query: 87 LGHGGFGSVYKAVVPSSSQP-----LAVKILDSSGSLQGEREFHNELSLASSLDC-PHIV 140
LG G FG V A S+ +AVK+L +EL + + L +IV
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRK---CEELMEW--NKRFE--------- 186
+LLG A G + LI+E L + L ++ E+ +E+ KR E
Sbjct: 113 NLLG-ACTLSGP-IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 187 ------IAIDIAKGLEYLHH-SCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +AKG+E+L SC +H D+ N+L+ KI DFGLAR
Sbjct: 171 FEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLAR 220
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYM-YEILKALD 145
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
++G G G V A S + +AVK++D + E F NE+ + D H + +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLF-NEVVIMR--DYQHFNVVEMY 108
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
S G L ++ E ++ +L D + + E + + + + L YLH
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIVSQVRLNE----EQIATVCEAVLQALAYLHAQG--- 161
Query: 206 VIHGDIKPSNILLDGDFKAKIGDFGLARLKTEDL 239
VIH DIK +ILL D + K+ DFG ++D+
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV 195
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 446 SGDIPKSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPLQVTA 505
S D+PK + TP ++APE L + + D++S G++++ ++ G P +
Sbjct: 192 SKDVPKRKXLVGTPY------WMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY-FSD 244
Query: 506 SPMSEFER 513
SP+ +R
Sbjct: 245 SPVQAMKR 252
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAV---------VPSSSQPLAVKILDSSGSLQGEREFHN 126
R T F ++G G FGSV+K V + S +PLA + D +L RE +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNAL---REVYA 61
Query: 127 ELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
L H+V F++ +++ E SL DA+ + +M + K E
Sbjct: 62 HAVLGQH---SHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAISENY--RIMSYFKEAE 114
Query: 187 ---IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILL 218
+ + + +GL Y+H ++H DIKPSNI +
Sbjct: 115 LKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAV---------VPSSSQPLAVKILDSSGSLQGEREFHN 126
R T F ++G G FGSV+K V + S +PLA + D +L RE +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNAL---REVYA 63
Query: 127 ELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
L H+V F++ +++ E SL DA+ + +M + K E
Sbjct: 64 HAVLGQH---SHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAISENY--RIMSYFKEAE 116
Query: 187 ---IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILL 218
+ + + +GL Y+H ++H DIKPSNI +
Sbjct: 117 LKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 22/171 (12%)
Query: 73 LIRRATA-SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA 131
L++R A + +G G FG V++ + +AVKI S + ER + E +
Sbjct: 35 LVQRTIARTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSS----REERSWFREAEIY 88
Query: 132 SSLDCPHIVSLLGF-ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
++ H ++LGF A+D + +L L+ + E+ SL D L+R + +
Sbjct: 89 QTVMLRH-ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTV---EGMIK 143
Query: 187 IAIDIAKGLEYLHHSC-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+A+ A GL +LH +P + H D+K NIL+ + I D GLA
Sbjct: 144 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAV---------VPSSSQPLAVKILDSSGSLQGEREFHN 126
R T F ++G G FGSV+K V + S +PLA + D +L RE +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNAL---REVYA 61
Query: 127 ELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
L H+V F++ +++ E SL DA+ + +M + K E
Sbjct: 62 HAVLGQH---SHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAISENY--RIMSYFKEAE 114
Query: 187 ---IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILL 218
+ + + +GL Y+H ++H DIKPSNI +
Sbjct: 115 LKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 12/164 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHI 139
+F LG G F V+ + + A+K + S + + + NE+++ + +I
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR-DSSLENEIAVLKKIKHENI 68
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
V+L LV+ +L+ L D +L+R E + I + ++YLH
Sbjct: 69 VTLEDIYESTTHYYLVM--QLVSGGELFDRILERGV--YTEKDASLVIQ-QVLSAVKYLH 123
Query: 200 HSCEPPVIHGDIKPSNILL---DGDFKAKIGDFGLARLKTEDLM 240
E ++H D+KP N+L + + K I DFGL++++ +M
Sbjct: 124 ---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM 164
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 451 KSGGISSTPSMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
+ GI ST GT Y+APE S+ D +S GV+ +L+ G P
Sbjct: 159 EQNGIMSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 145
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 438 GIC---EAESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 487
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
S +H D+ N+LL AKI DFGL++
Sbjct: 488 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 518
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 145
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 20/154 (12%)
Query: 87 LGHGGFGSV---YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLL 143
LG G FG+V Y + + + + + E E ++ LD P+IV ++
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 144 GFASDRRGRRLVLIYELME----NRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
G +L+ E+ E N+ LQ +R ++ E+ ++ G++YL
Sbjct: 437 GIC---EAESWMLVMEMAELGPLNKYLQQ---NRHVKD----KNIIELVHQVSMGMKYLE 486
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
S +H D+ N+LL AKI DFGL++
Sbjct: 487 ESN---FVHRDLAARNVLLVTQHYAKISDFGLSK 517
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 145
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 144
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 145 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHNELSLASSLDCPHIVSLLG 144
LG GGFG V+ + ++ + A K L+ + G + E + + + IVSL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 145 FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
+A + + L L+ +M ++ + +D E F A I GLE+LH
Sbjct: 252 YAFETK-TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLHQR- 308
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+I+ D+KP N+LLD D +I D GLA
Sbjct: 309 --NIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 145
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 145
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 76 RATASFSPSNRLGHGGFGSVYKAV---------VPSSSQPLAVKILDSSGSLQGEREFHN 126
R T F ++G G FGSV+K V + S +PLA + D +L RE +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSV-DEQNAL---REVYA 59
Query: 127 ELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
L H+V F++ +++ E SL DA+ + +M + K E
Sbjct: 60 HAVLGQH---SHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAISENY--RIMSYFKEAE 112
Query: 187 ---IAIDIAKGLEYLHHSCEPPVIHGDIKPSNILL 218
+ + + +GL Y+H ++H DIKPSNI +
Sbjct: 113 LKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 150
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 151 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 186
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF- 145
+G G FG V++ + +AVKI S + ER + E + ++ H ++LGF
Sbjct: 12 IGKGRFGEVWRG--KWRGEEVAVKIFSS----REERSWFREAEIYQTVMLRH-ENILGFI 64
Query: 146 ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
A+D + +L L+ + E+ SL D L+R + ++A+ A GL +LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTV---EGMIKLALSTASGLAHLHME 120
Query: 202 C-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+P + H D+K NIL+ + I D GLA
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 63/156 (40%), Gaps = 22/156 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE--REFHNELSLASSLDCPHIVSLLG 144
+G G FG V + + A+K ++ ++ R EL + L+ P +V+L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFE------IAIDIAKGLEYL 198
D +V+ D LL ++ N F+ ++ L+YL
Sbjct: 83 SFQDEEDMFMVV-----------DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+ +IH D+KP NILLD I DF +A +
Sbjct: 132 QNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAM 164
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHNELSLASSLDCPHIVSLLG 144
LG GGFG V+ + ++ + A K L+ + G + E + + + IVSL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 145 FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
+A + + L L+ +M ++ + +D E F A I GLE+LH
Sbjct: 252 YAFETK-TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLHQR- 308
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+I+ D+KP N+LLD D +I D GLA
Sbjct: 309 --NIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 91 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 144
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 145 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF- 145
+G G FG V++ + +AVKI S + ER + E + ++ H ++LGF
Sbjct: 14 IGKGRFGEVWRG--KWRGEEVAVKIFSS----REERSWFREAEIYQTVMLRH-ENILGFI 66
Query: 146 ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
A+D + +L L+ + E+ SL D L+R + ++A+ A GL +LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTV---EGMIKLALSTASGLAHLHME 122
Query: 202 C-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+P + H D+K NIL+ + I D GLA
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHNELSLASSLDCPHIVSLLG 144
LG GGFG V+ + ++ + A K L+ + G + E + + + IVSL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 145 FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
+A + + L L+ +M ++ + +D E F A I GLE+LH
Sbjct: 252 YAFETK-TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLHQR- 308
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+I+ D+KP N+LLD D +I D GLA
Sbjct: 309 --NIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQ--GEREFHNELSLASSLDCPHIVSLLG 144
LG GGFG V+ + ++ + A K L+ + G + E + + + IVSL
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL-A 251
Query: 145 FASDRRGRRLVLIYELMENRSLQDAL--LDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
+A + + L L+ +M ++ + +D E F A I GLE+LH
Sbjct: 252 YAFETK-TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLHQR- 308
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+I+ D+KP N+LLD D +I D GLA
Sbjct: 309 --NIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 145
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 145
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF- 145
+G G FG V++ + +AVKI S + ER + E + ++ H ++LGF
Sbjct: 17 IGKGRFGEVWRG--KWRGEEVAVKIFSS----REERSWFREAEIYQTVMLRH-ENILGFI 69
Query: 146 ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
A+D + +L L+ + E+ SL D L+R + ++A+ A GL +LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTV---EGMIKLALSTASGLAHLHME 125
Query: 202 C-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+P + H D+K NIL+ + I D GLA
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALD 143
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 144 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 32/178 (17%)
Query: 83 PSNRL------GHGGFGSV-----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA 131
P NRL G G FG V Y + ++ +AVK+L S L +EL +
Sbjct: 39 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 98
Query: 132 SSL-DCPHIVSLLGFASDRRGRRLVL----IYELMEN--RSLQDALLDRKCEELM----- 179
S L + +IV+LLG A G LV+ Y + N R +D+ + K +
Sbjct: 99 SYLGNHMNIVNLLG-ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 157
Query: 180 ---EWNKRFEIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ + +AKG+ +L +C IH D+ NILL KI DFGLAR
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF- 145
+G G FG V++ + +AVKI S + ER + E + ++ H ++LGF
Sbjct: 11 IGKGRFGEVWRG--KWRGEEVAVKIFSS----REERSWFREAEIYQTVMLRH-ENILGFI 63
Query: 146 ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
A+D + +L L+ + E+ SL D L+R + ++A+ A GL +LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTV---EGMIKLALSTASGLAHLHME 119
Query: 202 C-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+P + H D+K NIL+ + I D GLA
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 32/178 (17%)
Query: 83 PSNRL------GHGGFGSV-----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA 131
P NRL G G FG V Y + ++ +AVK+L S L +EL +
Sbjct: 37 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 96
Query: 132 SSL-DCPHIVSLLGFASDRRGRRLVL----IYELMEN--RSLQDALLDRKCEELM----- 179
S L + +IV+LLG A G LV+ Y + N R +D+ + K +
Sbjct: 97 SYLGNHMNIVNLLG-ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 155
Query: 180 ---EWNKRFEIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ + +AKG+ +L +C IH D+ NILL KI DFGLAR
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 32/178 (17%)
Query: 83 PSNRL------GHGGFGSV-----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA 131
P NRL G G FG V Y + ++ +AVK+L S L +EL +
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 132 SSL-DCPHIVSLLGFASDRRGRRLVLI----YELMEN--RSLQDALLDRKCEELM----- 179
S L + +IV+LLG A G LV+ Y + N R +D+ + K +
Sbjct: 104 SYLGNHMNIVNLLG-ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 180 ---EWNKRFEIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ + +AKG+ +L +C IH D+ NILL KI DFGLAR
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 9/166 (5%)
Query: 70 SYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGE--REFHNE 127
S NL R F+ LG G FG V A + + A+KIL +Q + E
Sbjct: 10 SNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVE 69
Query: 128 LSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEI 187
+ + LD P ++ L + + RL + E + L + ++ + E F
Sbjct: 70 KRVLALLDKPPFLTQLH-SCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVF-Y 125
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
A +I+ GL +LH +I+ D+K N++LD + KI DFG+ +
Sbjct: 126 AAEISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 32/178 (17%)
Query: 83 PSNRL------GHGGFGSV-----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA 131
P NRL G G FG V Y + ++ +AVK+L S L +EL +
Sbjct: 44 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 103
Query: 132 SSL-DCPHIVSLLGFASDRRGRRLVLI----YELMEN--RSLQDALLDRKCEELM----- 179
S L + +IV+LLG A G LV+ Y + N R +D+ + K +
Sbjct: 104 SYLGNHMNIVNLLG-ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 180 ---EWNKRFEIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ + +AKG+ +L +C IH D+ NILL KI DFGLAR
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 32/178 (17%)
Query: 83 PSNRL------GHGGFGSV-----YKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA 131
P NRL G G FG V Y + ++ +AVK+L S L +EL +
Sbjct: 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80
Query: 132 SSL-DCPHIVSLLGFASDRRGRRLVL----IYELMEN--RSLQDALLDRKCEELM----- 179
S L + +IV+LLG A G LV+ Y + N R +D+ + K +
Sbjct: 81 SYLGNHMNIVNLLG-ACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 180 ---EWNKRFEIAIDIAKGLEYL-HHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
+ + +AKG+ +L +C IH D+ NILL KI DFGLAR
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 69 FSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNE 127
F N + + ++ LG G F V + V ++ A KI+++ S + ++ E
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE 78
Query: 128 LSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEI 187
+ L P+IV L + LV ++L+ L + ++ R E+ +
Sbjct: 79 ARICRKLQHPNIVRLHDSIQEESFHYLV--FDLVTGGELFEDIVAR------EFYSEADA 130
Query: 188 AIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLA 232
+ I + LE + + ++H ++KP N+LL K K+ DFGLA
Sbjct: 131 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKI-----LDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G F V K + + A K L SS E E+++ + P+I++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
L ++ +VLI EL+ L D L ++ E L E ++ + I G+ YLH
Sbjct: 73 LHDIFENKTD--VVLILELVSGGELFDFLAEK--ESLTE-DEATQFLKQILDGVHYLHSK 127
Query: 202 CEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
+ H D+KP NI LLD + + K+ DFG+A
Sbjct: 128 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 170 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 78 TASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDC 136
T + +G G F V + V + A KI+++ S + ++ E + L
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
+IV L S+ LV ++L+ L + ++ R E+ + + I + LE
Sbjct: 63 SNIVRLHDSISEEGFHYLV--FDLVTGGELFEDIVAR------EYYSEADASHCIQQILE 114
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLA 232
+ H + V+H D+KP N+LL K K+ DFGLA
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA 153
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G FG V+KA + Q +A+K + +G E+ + L ++V+L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 145 FA------SDRRGRRLVLIYELMENRS---LQDALLDRKCEELMEWNKRFEIAIDIAKGL 195
+R + L+++ E+ L + L+ E+ KR + + GL
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR--VMQMLLNGL 138
Query: 196 EYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
Y+H + ++H D+K +N+L+ D K+ DFGLAR
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G FG V+KA + Q +A+K + +G E+ + L ++V+L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 145 FA------SDRRGRRLVLIYELMENRS---LQDALLDRKCEELMEWNKRFEIAIDIAKGL 195
+R + L+++ E+ L + L+ E+ KR + + GL
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR--VMQMLLNGL 138
Query: 196 EYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
Y+H + ++H D+K +N+L+ D K+ DFGLAR
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 10/99 (10%)
Query: 137 PHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
P+I++L D R L++E + N + + + L +++ RF + +I K L+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFK-----QLRQTLTDYDIRFYMY-EILKALD 145
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGDF-KAKIGDFGLARL 234
Y H ++H D+KP N+++D + K ++ D+GLA
Sbjct: 146 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 181
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKI-----LDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G F V K + + A K L SS E E+++ + P+I++
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
L ++ +VLI EL+ L D L ++ E L E ++ + I G+ YLH
Sbjct: 80 LHDIFENKTD--VVLILELVSGGELFDFLAEK--ESLTE-DEATQFLKQILDGVHYLHSK 134
Query: 202 CEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
+ H D+KP NI LLD + + K+ DFG+A
Sbjct: 135 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 12/148 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
+G GGF V A + + +A+KI+D + E+ +L HI L +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL--YH 75
Query: 147 SDRRGRRLVLIYELMENRSLQDALL--DRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
++ ++ E L D ++ DR EE E F I + Y+H
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEE--ETRVVFR---QIVSAVAYVH---SQ 127
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLA 232
H D+KP N+L D K K+ DFGL
Sbjct: 128 GYAHRDLKPENLLFDEYHKLKLIDFGLC 155
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 450 PKSGGISSTPSMRGTVCYIAPEY-GGGGLLSEKCDVYSFGVLILVLISGRRPL 501
PK + G++ Y APE G L + DV+S G+L+ VL+ G P
Sbjct: 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKI-----LDSSGSLQGEREFHNELSLASSLDCPHIVS 141
LG G F V K + + A K L SS E E+++ + P+I++
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHS 201
L ++ +VLI EL+ L D L ++ E L E ++ + I G+ YLH
Sbjct: 94 LHDIFENKTD--VVLILELVSGGELFDFLAEK--ESLTE-DEATQFLKQILDGVHYLHSK 148
Query: 202 CEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
+ H D+KP NI LLD + + K+ DFG+A
Sbjct: 149 ---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 86 RLGHGGFGSVYKAVVPSSSQP--LAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSL 142
++G G +G VYKA A+K ++ +G S+ RE ++L L P+++SL
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE----IALLRELKHPNVISL 83
Query: 143 LGFASDRRGRRLVLIYELMEN------RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLE 196
R++ L+++ E+ + + + ++K +L + + I G+
Sbjct: 84 QKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK-SLLYQILDGIH 142
Query: 197 YLHHSCEPPVIHGDIKPSNILLDGD----FKAKIGDFGLARL 234
YLH + V+H D+KP+NIL+ G+ + KI D G ARL
Sbjct: 143 YLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G FG V+KA + Q +A+K + +G E+ + L ++V+L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 145 FA------SDRRGRRLVLIYELMENRS---LQDALLDRKCEELMEWNKRFEIAIDIAKGL 195
+R + L+++ E+ L + L+ E+ KR + + GL
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR--VMQMLLNGL 137
Query: 196 EYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
Y+H + ++H D+K +N+L+ D K+ DFGLAR
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G FG V+KA + Q +A+K + +G E+ + L ++V+L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 145 FA------SDRRGRRLVLIYELMENRS---LQDALLDRKCEELMEWNKRFEIAIDIAKGL 195
+R + L+++ E+ L + L+ E+ KR + + GL
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR--VMQMLLNGL 138
Query: 196 EYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
Y+H + ++H D+K +N+L+ D K+ DFGLAR
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 79 ASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKIL-----------DSSGSLQGEREFHNE 127
A + +LG G F +V+ A ++ +A+KI+ D LQ + N
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADN- 77
Query: 128 LSLASSLDCPHIVSLLGFASDR--RGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRF 185
+ S+ HI+ LL + + G +V+++E++ L AL+ + +
Sbjct: 78 -TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL--ALIKKYEHRGIPLIYVK 134
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILL------DGDFKAKIGDFGLA 232
+I+ + GL+Y+H C +IH DIKP N+L+ + + KI D G A
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 25/173 (14%)
Query: 79 ASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKIL-----------DSSGSLQGEREFHNE 127
A + +LG G F +V+ A ++ +A+KI+ D LQ + N
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADN- 77
Query: 128 LSLASSLDCPHIVSLLGFASDR--RGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRF 185
+ S+ HI+ LL + + G +V+++E++ L AL+ + +
Sbjct: 78 -TKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLL--ALIKKYEHRGIPLIYVK 134
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILL------DGDFKAKIGDFGLA 232
+I+ + GL+Y+H C +IH DIKP N+L+ + + KI D G A
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G +G+V+KA + + +A+K + +G E+ L L +IV L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
++L L++E + + L+ C ++ + KGL + H
Sbjct: 69 VL--HSDKKLTLVFEFCD-QDLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHSR--- 120
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
V+H D+KP N+L++ + + K+ DFGLAR
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLDCPHIVS 141
LG G F V K S+ A K + S R E E+S+ + ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIAKGLEYL 198
L +R +VLI EL+ L D L ++ EE + K+ I G+ YL
Sbjct: 80 LHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGVNYL 131
Query: 199 HHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
H + H D+KP NI LLD + K+ DFGLA
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN--ELSLAS 132
R F LG G FG V ++ + A+KIL + + H E +
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 133 SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA 192
+ P + +L S + RL + E L L + E RF A +I
Sbjct: 207 NSRHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGA-EIV 261
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
L+YLH E V++ D+K N++LD D KI DFGL + +D
Sbjct: 262 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 305
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLDCPHIVS 141
LG G F V K S+ A K + S R E E+S+ + ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIAKGLEYL 198
L +R +VLI EL+ L D L ++ EE + K+ I G+ YL
Sbjct: 80 LHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGVNYL 131
Query: 199 HHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
H + H D+KP NI LLD + K+ DFGLA
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLDCPHIVS 141
LG G F V K S+ A K + S R E E+S+ + ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIAKGLEYL 198
L +R +VLI EL+ L D L ++ EE + K+ I G+ YL
Sbjct: 80 LHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGVNYL 131
Query: 199 HHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
H + H D+KP NI LLD + K+ DFGLA
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN--ELSLAS 132
R F LG G FG V ++ + A+KIL + + H E +
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 133 SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA 192
+ P + +L S + RL + E L L + E RF A +I
Sbjct: 204 NSRHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGA-EIV 258
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
L+YLH E V++ D+K N++LD D KI DFGL + +D
Sbjct: 259 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLDCPHIVS 141
LG G F V K S+ A K + S R E E+S+ + ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIAKGLEYL 198
L +R +VLI EL+ L D L ++ EE + K+ I G+ YL
Sbjct: 80 LHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGVNYL 131
Query: 199 HHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
H + H D+KP NI LLD + K+ DFGLA
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 13/164 (7%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
++ N +G G +G V AV + A K + +R F E+ + SLD P+I+
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNII 69
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L D + L+ EL L + ++ ++ + + I D+ + Y H
Sbjct: 70 RLYETFEDNTD--IYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHK 124
Query: 201 SCEPPVIHGDIKPSNILL---DGDFKAKIGDFGL-ARLKTEDLM 240
V H D+KP N L D K+ DFGL AR K +M
Sbjct: 125 LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 165
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT Y++P+ G L +CD +S GV++ VL+ G P
Sbjct: 170 GTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 13/164 (7%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIV 140
++ N +G G +G V AV + A K + +R F E+ + SLD P+I+
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNII 86
Query: 141 SLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHH 200
L D + L+ EL L + ++ ++ + + I D+ + Y H
Sbjct: 87 RLYETFEDNTD--IYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHK 141
Query: 201 SCEPPVIHGDIKPSNILL---DGDFKAKIGDFGL-ARLKTEDLM 240
V H D+KP N L D K+ DFGL AR K +M
Sbjct: 142 LN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM 182
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 463 GTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
GT Y++P+ G L +CD +S GV++ VL+ G P
Sbjct: 187 GTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 80 SFSPSNRLGHGGFGS-VYKAVVPSSSQPLAVK-ILDSSGSLQGEREFHNELSLASSLDCP 137
SF P + LGHG G+ VY+ + ++ +AVK IL S +RE L S + P
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF--DNRDVAVKRILPECFSF-ADREVQ---LLRESDEHP 78
Query: 138 HIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+++ DR+ + + + EL +LQ+ + + L + + GL +
Sbjct: 79 NVIRYFCTEKDRQFQYIAI--ELCAA-TLQEYVEQKDFAHL--GLEPITLLQQTTSGLAH 133
Query: 198 LHHSCEPPVIHGDIKPSNILLD-----GDFKAKIGDFGLAR 233
LH ++H D+KP NIL+ G KA I DFGL +
Sbjct: 134 LH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPH 138
++ LG G F V + V ++ A KI+++ S + ++ E + L P+
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
IV L + LV ++L+ L + ++ R E+ + + I + LE +
Sbjct: 67 IVRLHDSIQEESFHYLV--FDLVTGGELFEDIVAR------EFYSEADASHCIQQILESI 118
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLA 232
+ ++H ++KP N+LL K K+ DFGLA
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 12/157 (7%)
Query: 80 SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPH 138
++ LG G F V + V ++ A KI+++ S + ++ E + L P+
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 139 IVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
IV L + LV ++L+ L + ++ R E+ + + I + LE +
Sbjct: 66 IVRLHDSIQEESFHYLV--FDLVTGGELFEDIVAR------EFYSEADASHCIQQILESI 117
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFK---AKIGDFGLA 232
+ ++H ++KP N+LL K K+ DFGLA
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 27/167 (16%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF- 145
+G+G FG V++A + S + +A+K LQ +R + EL + + P++V L F
Sbjct: 48 IGNGSFGVVFQAKLVESDE-VAIK-----KVLQDKRFKNRELQIMRIVKHPNVVDLKAFF 101
Query: 146 -----ASDRRGRRLVLIY--ELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
D LVL Y E + S A L + L+ +++ + L Y+
Sbjct: 102 YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL----RSLAYI 157
Query: 199 HHSCEPPVIHGDIKPSNILLDGDFKA-KIGDFGLARLKTEDLMIEGE 244
H + H DIKP N+LLD K+ DFG A+ ++I GE
Sbjct: 158 HSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAK-----ILIAGE 196
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 73 LIRRATA-SFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLA 131
L++R A ++G G +G V+ + +AVK+ ++ E + E +
Sbjct: 30 LVQRTIAKQIQMVKQIGKGRYGEVWMG--KWRGEKVAVKVFFTTE----EASWFRETEIY 83
Query: 132 SSLDCPHIVSLLGF-ASDRRGR----RLVLIYELMENRSLQDALLDRKCEELMEWNKRFE 186
++ H ++LGF A+D +G +L LI + EN SL D L ++ +
Sbjct: 84 QTVLMRH-ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT----LDAKSMLK 138
Query: 187 IAIDIAKGLEYLHHSC-----EPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+A GL +LH +P + H D+K NIL+ + I D GLA
Sbjct: 139 LAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 70/153 (45%), Gaps = 17/153 (11%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSS-----GSLQGEREFHNELSLASSLDCPH--I 139
LG GGFGSVY + S + P+A+K ++ G L E+ L + +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 140 VSLLGFASDRRGRRLVLIYELMEN-RSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYL 198
+ LL + R VLI E ME + L D + +R + E + F + LE +
Sbjct: 76 IRLLDWFE--RPDSFVLILERMEPVQDLFDFITERGALQ-EELARSF-----FWQVLEAV 127
Query: 199 HHSCEPPVIHGDIKPSNILLDGD-FKAKIGDFG 230
H V+H DIK NIL+D + + K+ DFG
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLLGF 145
LG G F V + V ++ A KI+++ S + ++ E + L P+IV L
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 146 ASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPP 205
+ LV ++L+ L + ++ R E+ + + I + LE + +
Sbjct: 74 IQEESFHYLV--FDLVTGGELFEDIVAR------EFYSEADASHCIQQILESIAYCHSNG 125
Query: 206 VIHGDIKPSNILLDGDFK---AKIGDFGLA 232
++H ++KP N+LL K K+ DFGLA
Sbjct: 126 IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN--ELSLASSLDCPH 138
F LG G FG V ++ + A+KIL + + H E + + P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 139 IVSL-LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+ +L F + R L + E L L + E RF A +I LEY
Sbjct: 67 LTALKYAFQTHDR---LCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEY 120
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH V++ DIK N++LD D KI DFGL +
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGER-----EFHNELSLASSLDCPHIVS 141
LG G F V K S+ A K + S R E E+S+ + ++++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 142 LLGFASDRRGRRLVLIYELMENRSLQDALLDRKC---EELMEWNKRFEIAIDIAKGLEYL 198
L +R +VLI EL+ L D L ++ EE + K+ I G+ YL
Sbjct: 80 LHDVYENRTD--VVLILELVSGGELFDFLAQKESLSEEEATSFIKQ------ILDGVNYL 131
Query: 199 HHSCEPPVIHGDIKPSNI-LLDGDF---KAKIGDFGLA 232
H + H D+KP NI LLD + K+ DFGLA
Sbjct: 132 HTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 460 SMRGTVCYIAPEYGGGGLLSEKCDVYSFGVLILVLISGRRPL 501
++ GT ++APE L + D++S GV+ +L+SG P
Sbjct: 177 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPH-I 139
F LG G FG V ++ + A+KIL + + H + H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
++ L +A R L + E L L + E RF A +I LEYLH
Sbjct: 67 LTALKYAFQTHDR-LCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEYLH 122
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
V++ DIK N++LD D KI DFGL +
Sbjct: 123 SR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G VY S+ +A+K + S + + H E++L L +IV LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAI-DIAKGLEYLHHSCEPP 205
S+ ++ + E + SL ALL K L + + I +GL+YLH +
Sbjct: 89 SENGFIKIFM--EQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 142
Query: 206 VIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
++H DIK N+L++ KI DFG ++
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSK 171
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 12/150 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN--ELSLASSLDCPHIVSL-L 143
LG G FG V ++ + A+KIL + + H E + + P + +L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F + R L + E L L + E RF A +I LEYLH
Sbjct: 76 AFQTHDR---LCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEYLHSR-- 127
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
V++ DIK N++LD D KI DFGL +
Sbjct: 128 -DVVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPH-I 139
F LG G FG V ++ + A+KIL + + H + H
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
++ L +A R L + E L L + E RF A +I LEYLH
Sbjct: 72 LTALKYAFQTHDR-LCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEYLH 127
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
V++ DIK N++LD D KI DFGL +
Sbjct: 128 SR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 77/186 (41%), Gaps = 27/186 (14%)
Query: 54 APSDLKSPNHNHCRRFSYNLIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILD 113
A L+SP ++ R S+ SF +RLGHG +G V+K + AVK
Sbjct: 37 ASETLQSPGYDPSRPESFF-----QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--R 89
Query: 114 SSGSLQGEREFHNELSLASSLD--CPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALL 171
S +G ++ +L+ S + H + + G L L EL SLQ
Sbjct: 90 SMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQ---- 144
Query: 172 DRKCEELMEWNKRFEIAI------DIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAK 225
+ CE W A D L +LH ++H D+KP+NI L + K
Sbjct: 145 -QHCEA---WGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCK 197
Query: 226 IGDFGL 231
+GDFGL
Sbjct: 198 LGDFGL 203
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN--ELSLASSLDCPH 138
F LG G FG V ++ + A+KIL + + H E + + P
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 139 IVSL-LGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEY 197
+ +L F + R L + E L L + E RF A +I LEY
Sbjct: 67 LTALKYAFQTHDR---LCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEY 120
Query: 198 LHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
LH V++ DIK N++LD D KI DFGL +
Sbjct: 121 LHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 107 LAVKILDSSG-SLQGEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRS 165
+ VK+L S + R+F+ E P+++ +LG LI M S
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS 95
Query: 166 LQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAK 225
L + +L +++ ++ + A+D+A+G+ +L H+ EP + + ++++D D A+
Sbjct: 96 LYN-VLHEGTNFVVDQSQAVKFALDMARGMAFL-HTLEPLIPRHALNSRSVMIDEDMTAR 153
Query: 226 IG 227
I
Sbjct: 154 IS 155
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 12/150 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN--ELSLASSLDCPHIVSL-L 143
LG G FG V ++ + A+KIL + + H E + + P + +L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 144 GFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCE 203
F + R L + E L L + E RF A +I LEYLH
Sbjct: 73 AFQTHDR---LCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEYLHSR-- 124
Query: 204 PPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
V++ DIK N++LD D KI DFGL +
Sbjct: 125 -DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Query: 81 FSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPH-I 139
F LG G FG V ++ + A+KIL + + H + H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 140 VSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLH 199
++ L +A R L + E L L + E RF A +I LEYLH
Sbjct: 67 LTALKYAFQTHDR-LCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEYLH 122
Query: 200 HSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
V++ DIK N++LD D KI DFGL +
Sbjct: 123 SR---DVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 9/168 (5%)
Query: 73 LIRRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN--ELSL 130
+ R F LG G FG V ++ + A+KIL + + H E +
Sbjct: 3 MARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 62
Query: 131 ASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAID 190
+ P + +L S + RL + E L L + E RF A +
Sbjct: 63 LQNSRHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGA-E 117
Query: 191 IAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
I L+YLH E V++ D+K N++LD D KI DFGL + +D
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 163
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G +G VY S+ +A+K + S + + H E++L L +IV LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAI-DIAKGLEYLHHSCEPP 205
S+ ++ + E + SL ALL K L + + I +GL+YLH +
Sbjct: 75 SENGFIKIFM--EQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---Q 128
Query: 206 VIHGDIKPSNILLDGDFKA-KIGDFGLAR 233
++H DIK N+L++ KI DFG ++
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSK 157
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 9/149 (6%)
Query: 86 RLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQG-EREFHNELSLASSLDCPHIVSLLG 144
++G G +G+V+KA + + +A+K + +G E+ L L +IV L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 145 FASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEP 204
++L L++E + + L+ C ++ + KGL + H
Sbjct: 69 VL--HSDKKLTLVFEFCD-QDLKKYF--DSCNGDLDPEIVKSFLFQLLKGLGFCHSR--- 120
Query: 205 PVIHGDIKPSNILLDGDFKAKIGDFGLAR 233
V+H D+KP N+L++ + + K+ +FGLAR
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN--ELSLAS 132
R F LG G FG V ++ + A+KIL + + H E +
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 133 SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA 192
+ P + +L S + RL + E L L + E RF A +I
Sbjct: 64 NSRHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGA-EIV 118
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
L+YLH E V++ D+K N++LD D KI DFGL + +D
Sbjct: 119 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 162
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 9/166 (5%)
Query: 75 RRATASFSPSNRLGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHN--ELSLAS 132
R F LG G FG V ++ + A+KIL + + H E +
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 133 SLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIA 192
+ P + +L S + RL + E L L + E RF A +I
Sbjct: 66 NSRHPFLTALK--YSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGA-EIV 120
Query: 193 KGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARLKTED 238
L+YLH E V++ D+K N++LD D KI DFGL + +D
Sbjct: 121 SALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 164
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 17/192 (8%)
Query: 87 LGHGGFGSVYKAVVPSSSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGFA 146
LG G V + +SQ AVKI++ R F L H L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG--HRNVLELIE 78
Query: 147 SDRRGRRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPV 206
R L++E M S+ + R+ +E + + D+A L++LH+ +
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLHNK---GI 132
Query: 207 IHGDIKPSNILLDGDFK---AKIGDFGLARLKTEDLMIEGEC--VKKRDVNEDNGSILEE 261
H D+KP NIL + + KI DFGL + + G+C + ++ GS
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLG----SGIKLNGDCSPISTPELLTPCGSAEYM 188
Query: 262 TESVVTAYEESA 273
VV A+ E A
Sbjct: 189 APEVVEAFSEEA 200
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 457 STPSMR---GTVCYIAPEY-----GGGGLLSEKCDVYSFGVLILVLISGRRPL 501
STP + G+ Y+APE + ++CD++S GV++ +L+SG P
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 70/176 (39%), Gaps = 47/176 (26%)
Query: 87 LGHGGFGSVYKAVVPSSSQ-----PLAVKILDS-SGSLQGEREFHNELS----------- 129
+G GGFG +Y A + SS P VK+ S +G L E +F+ +
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 130 -----------LASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEEL 178
S L + S DR G L IYE R + +L
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVL------- 155
Query: 179 MEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLD--GDFKAKIGDFGLA 232
++++ I LEY+H E +HGDIK SN+LL+ + + D+GLA
Sbjct: 156 -------QLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 70/176 (39%), Gaps = 47/176 (26%)
Query: 87 LGHGGFGSVYKAVVPSSSQ-----PLAVKILDS-SGSLQGEREFHNELS----------- 129
+G GGFG +Y A + SS P VK+ S +G L E +F+ +
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 130 -----------LASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEEL 178
S L + S DR G L IYE R + +L
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVL------- 155
Query: 179 MEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLD--GDFKAKIGDFGLA 232
++++ I LEY+H E +HGDIK SN+LL+ + + D+GLA
Sbjct: 156 -------QLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLA 201
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%), Gaps = 47/186 (25%)
Query: 77 ATASFSPSNRLGHGGFGSVYKAVVPSSSQ-----PLAVKILDS-SGSLQGEREFHNELS- 129
A A++ +G GGFG +Y A + SS P VK+ S +G L E +F+ +
Sbjct: 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAK 92
Query: 130 ---------------------LASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQD 168
S L + S DR G L IYE R +
Sbjct: 93 PEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRK 152
Query: 169 ALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLD--GDFKAKI 226
+L ++++ I LEY+H E +HGDIK SN+LL+ + +
Sbjct: 153 TVL--------------QLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYL 195
Query: 227 GDFGLA 232
D+GLA
Sbjct: 196 VDYGLA 201
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 152 RRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDI 211
+L L+ ELM L + D++ + + F I GL LH E V+H D+
Sbjct: 107 HKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYF--MYHILLGLHVLH---EAGVVHRDL 160
Query: 212 KPSNILLDGDFKAKIGDFGLARLKTED 238
P NILL + I DF LAR T D
Sbjct: 161 HPGNILLADNNDITICDFNLAREDTAD 187
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 13/148 (8%)
Query: 87 LGHGGFGSVYKAVVPS-SSQPLAVKILDSSGSLQGEREFHNELSLASSLDCPHIVSLLGF 145
+ HGG G +Y A+ + + +P+ +K L SG + + E + + P IV + F
Sbjct: 88 IAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNF 147
Query: 146 A--SDRRGRRL-VLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSC 202
+DR G + ++ E + +SL+ R + + + ++I L YLH
Sbjct: 148 VEHTDRHGDPVGYIVMEYVGGQSLK-----RSKGQKLPVAEAIAYLLEILPALSYLHSIG 202
Query: 203 EPPVIHGDIKPSNILLDGDFKAKIGDFG 230
+++ D+KP NI+L + + K+ D G
Sbjct: 203 ---LVYNDLKPENIMLTEE-QLKLIDLG 226
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 152 RRLVLIYELMENRSLQDALLDRKCEELMEWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDI 211
+L L+ ELM L + D++ + + F I GL LH E V+H D+
Sbjct: 107 HKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYF--MYHILLGLHVLH---EAGVVHRDL 160
Query: 212 KPSNILLDGDFKAKIGDFGLARLKTED 238
P NILL + I DF LAR T D
Sbjct: 161 HPGNILLADNNDITICDFNLAREDTAD 187
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 120 GEREFHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALLDRKCEELM 179
GE E+ L L +++ L+ + +++ ++ E +Q+ +LD E+
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVC-GMQE-MLDSVPEKRF 106
Query: 180 EWNKRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLA 232
+ + GLEYLH ++H DIKP N+LL KI G+A
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 71 YNLIRRATASFSPSNRLGHGGFGSVYKAV---VPSSSQ----PLAVKILDSSGSLQGERE 123
++ IR F+ S LG G F ++K V V Q + +K+LD + E
Sbjct: 2 FHKIRNEDLIFNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSE-S 58
Query: 124 FHNELSLASSLDCPHIVSLLGFASDRRGRRLVLIYELMENRSLQDALL-DRKCEELMEWN 182
F S+ S L H+V L + G +L+ E ++ SL L ++ C ++ W
Sbjct: 59 FFEAASMMSKLSHKHLV--LNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINIL-W- 114
Query: 183 KRFEIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILLDGDFKAKIGDFGLARL 234
+ E+A +A + +L E +IHG++ NILL + K G+ +L
Sbjct: 115 -KLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 186 EIAIDIAKGLEYLHHSCEPPVIHGDIKPSNILL 218
+I + +GL+YLH C +IH DIKP NILL
Sbjct: 134 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILL 164
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,159,271
Number of Sequences: 62578
Number of extensions: 721158
Number of successful extensions: 4413
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 263
Number of HSP's that attempted gapping in prelim test: 2198
Number of HSP's gapped (non-prelim): 1671
length of query: 603
length of database: 14,973,337
effective HSP length: 104
effective length of query: 499
effective length of database: 8,465,225
effective search space: 4224147275
effective search space used: 4224147275
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)