BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046100
MAESEEYPKDYYSNPTTRVSSSSSSSTTSVHVTALDGIVNVNSLFTIAVFVGLSLTTPGQ
HSLENPSACDAGVDVAKKLLVFEVVSFSFFLFSSLVAQGLKLALNLINSKDVDEAFRAHI
NLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCGSKSAVHAAAALIVLVSTAL
LAYISTAIYAFWH

High Scoring Gene Products

Symbol, full name Information P value
AT3G07510 protein from Arabidopsis thaliana 3.5e-52
MEE60
AT5G05950
protein from Arabidopsis thaliana 1.7e-20
AT3G46890 protein from Arabidopsis thaliana 1.7e-07

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046100
        (193 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2079666 - symbol:AT3G07510 "AT3G07510" species...   541  3.5e-52   1
TAIR|locus:2153689 - symbol:MEE60 "AT5G05950" species:370...   242  1.7e-20   1
TAIR|locus:2102742 - symbol:AT3G46890 "AT3G46890" species...   120  1.7e-07   1


>TAIR|locus:2079666 [details] [associations]
            symbol:AT3G07510 "AT3G07510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002686 GenomeReviews:BA000014_GR
            UniGene:At.48631 UniGene:At.71201 EMBL:AF370475 EMBL:AY081696
            IPI:IPI00522062 RefSeq:NP_001078120.1 RefSeq:NP_566310.1
            EnsemblPlants:AT3G07510.1 EnsemblPlants:AT3G07510.2 GeneID:819939
            KEGG:ath:AT3G07510 TAIR:At3g07510 eggNOG:NOG246438
            HOGENOM:HOG000240599 InParanoid:Q94K16 OMA:VIQIRLG PhylomeDB:Q94K16
            ProtClustDB:CLSN2721714 ArrayExpress:Q94K16 Genevestigator:Q94K16
            Uniprot:Q94K16
        Length = 189

 Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
 Identities = 110/160 (68%), Positives = 120/160 (75%)

Query:    34 ALDGIVNVNSLFTIAVFVGLSLTTPGQHSLENPSACDAGVDVAKKXXXXXXXXXXXXXXX 93
             ALDG+VNVNSLFTIAVFVGLSL TPGQHSLE  S+CDA  DVAKK               
Sbjct:    30 ALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKKLLVFEVVSFSFFLFS 89

Query:    94 XXXAQGLKLALNLINSKDVDEAFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQI 153
                AQGLKLALNL+NSKDV+E FRAHIN+KVLR+GM   A+GSVMGCLFLMLS+VNVIQI
Sbjct:    90 SLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVMGCLFLMLSMVNVIQI 149

Query:   154 RLGMLSCGSKSXXXXXXXXXXXXSTALLAYISTAIYAFWH 193
             RLG+LSCGSKS            S+ALL YISTAIYAFWH
Sbjct:   150 RLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189


>TAIR|locus:2153689 [details] [associations]
            symbol:MEE60 "AT5G05950" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009793
            "embryo development ending in seed dormancy" evidence=IMP]
            [GO:0006661 "phosphatidylinositol biosynthetic process"
            evidence=RCA] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009793
            EMBL:AB017060 HOGENOM:HOG000240599 ProtClustDB:CLSN2721714
            EMBL:AY086454 EMBL:BT025529 EMBL:AK228786 IPI:IPI00528332
            RefSeq:NP_196214.1 UniGene:At.32928 STRING:Q9FI91
            EnsemblPlants:AT5G05950.1 GeneID:830480 KEGG:ath:AT5G05950
            TAIR:At5g05950 eggNOG:NOG248420 InParanoid:Q9FI91 OMA:FIGLAWN
            PhylomeDB:Q9FI91 Genevestigator:Q9FI91 Uniprot:Q9FI91
        Length = 175

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 62/165 (37%), Positives = 83/165 (50%)

Query:    34 ALDGIVNVNSLFTIAVFVGLSLT-TPGQHSLENPSACDAGVDVAKKXXXXXXXXXXXXXX 92
             ALDGIVNVNSLFT+AVF+GL+   T   +SL     C     +A+               
Sbjct:     9 ALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYSFASFLF 68

Query:    93 XXXXAQGLKLA--LNLINSKDVDEAFRA---HINLKVLRFGMTGCAIGSVMGCLFLMLSI 147
                 A GLK A  LN+ +S  +         ++N   LRFGM    +GSV GC FLML++
Sbjct:    69 SSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGSVCGCGFLMLAL 128

Query:   148 VNVIQIRLGMLSCGSKSXXXXXXX-XXXXXSTALLAYISTAIYAF 191
             +NV+QI+LG L CG+                +AL  Y+S  +YAF
Sbjct:   129 INVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173


>TAIR|locus:2102742 [details] [associations]
            symbol:AT3G46890 "AT3G46890" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL096859
            HOGENOM:HOG000240599 ProtClustDB:CLSN2721714 EMBL:BT010845
            EMBL:BT011314 IPI:IPI00547121 PIR:T12959 RefSeq:NP_190273.1
            UniGene:At.35872 EnsemblPlants:AT3G46890.1 GeneID:823842
            KEGG:ath:AT3G46890 TAIR:At3g46890 eggNOG:NOG237103 OMA:GTSIHIT
            PhylomeDB:Q9STG1 Genevestigator:Q9STG1 Uniprot:Q9STG1
        Length = 204

 Score = 120 (47.3 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 26/78 (33%), Positives = 41/78 (52%)

Query:   115 AFRAHINLKVLRFGMTGCAIGSVMGCLFLMLSIVNVIQIRLGMLSCG-SKSXXXXXXXXX 173
             A    +NL  LR G+    + SV+GC FL +++V+++QI+LG L C  S           
Sbjct:   125 AGEGRVNLAALRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLV 184

Query:   174 XXXSTALLAYISTAIYAF 191
                 +AL+ Y+   +YAF
Sbjct:   185 VLVPSALIIYVFLVLYAF 202


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.135   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      193       145   0.00071  103 3  11 22  0.42    31
                                                     30  0.49    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  566 (60 KB)
  Total size of DFA:  122 KB (2079 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.09u 0.19s 10.28t   Elapsed:  00:00:01
  Total cpu time:  10.09u 0.19s 10.28t   Elapsed:  00:00:01
  Start:  Fri May 10 20:25:07 2013   End:  Fri May 10 20:25:08 2013

Back to top