Query 046100
Match_columns 193
No_of_seqs 56 out of 58
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 15:10:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046100.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/046100hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtm1 f.23.35.1 (M:1-36) Pho 8.2 1.1E+02 0.0078 17.9 2.1 14 169-182 10-23 (36)
2 d1uspa_ d.227.1.1 (A:) Organic 6.9 1.4E+02 0.01 19.6 2.7 17 129-145 47-63 (137)
3 d2onfa1 d.227.1.1 (A:1-139) Hy 6.2 1.6E+02 0.012 19.4 2.7 19 129-147 45-63 (139)
4 d2axtj1 f.23.32.1 (J:7-40) Pho 6.2 2.2E+02 0.016 16.3 2.8 22 164-185 5-26 (34)
5 d5easa1 a.102.4.1 (A:24-220) 5 5.5 98 0.0072 23.5 1.2 15 142-157 42-56 (197)
6 d2d7va1 d.227.1.1 (A:7-161) Hy 5.2 2E+02 0.014 19.7 2.7 19 129-147 62-80 (155)
7 d1vlaa_ d.227.1.2 (A:) Hypothe 5.2 2E+02 0.015 18.9 2.7 18 129-146 47-64 (144)
8 d1n1ba1 a.102.4.1 (A:64-270) ( 5.1 1.1E+02 0.0077 23.5 1.2 16 141-157 40-55 (207)
9 d1sqwa2 d.17.6.3 (A:1-94) Nip7 5.0 57 0.0041 22.7 -0.5 14 25-38 76-89 (94)
10 d1deua_ d.3.1.1 (A:) (Pro)cath 4.7 1.1E+02 0.008 22.5 0.9 15 159-173 60-74 (275)
No 1
>d2axtm1 f.23.35.1 (M:1-36) Photosystem II reaction center protein M, PsbM {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=8.23 E-value=1.1e+02 Score=17.89 Aligned_cols=14 Identities=50% Similarity=0.676 Sum_probs=10.0
Q ss_pred HHHHHHHHHhHHHH
Q 046100 169 AAALIVLVSTALLA 182 (193)
Q Consensus 169 vvpLvvLV~~aLvi 182 (193)
+..|++|||+..++
T Consensus 10 At~LFilvPt~FLl 23 (36)
T d2axtm1 10 ATALFVLVPSVFLI 23 (36)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44688888887654
No 2
>d1uspa_ d.227.1.1 (A:) Organic hydroperoxide resistance protein Ohr {Deinococcus radiodurans [TaxId: 1299]}
Probab=6.89 E-value=1.4e+02 Score=19.55 Aligned_cols=17 Identities=0% Similarity=0.030 Sum_probs=12.3
Q ss_pred HHHhhhhhHHHHHHHHH
Q 046100 129 MTGCAIGSVMGCLFLML 145 (193)
Q Consensus 129 mL~sa~GSV~Gc~FLml 145 (193)
||++|+|+.++-.+.+.
T Consensus 47 lllaAlasC~~~t~~~~ 63 (137)
T d1uspa_ 47 LFAAGYAACFQGALGVV 63 (137)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888888766665543
No 3
>d2onfa1 d.227.1.1 (A:1-139) Hypothetical protein Ta0195 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=6.19 E-value=1.6e+02 Score=19.41 Aligned_cols=19 Identities=16% Similarity=0.153 Sum_probs=14.9
Q ss_pred HHHhhhhhHHHHHHHHHHH
Q 046100 129 MTGCAIGSVMGCLFLMLSI 147 (193)
Q Consensus 129 mL~sa~GSV~Gc~FLmlsm 147 (193)
+|++|+|+.++..|.+.+=
T Consensus 45 lllaala~C~~~~~~~~a~ 63 (139)
T d2onfa1 45 LFPSVLASCLLTTFLEFKD 63 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8899999888877776554
No 4
>d2axtj1 f.23.32.1 (J:7-40) Photosystem II reaction center protein J, PsbJ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=6.16 E-value=2.2e+02 Score=16.27 Aligned_cols=22 Identities=27% Similarity=0.256 Sum_probs=16.5
Q ss_pred chhHhHHHHHHHHHhHHHHHhh
Q 046100 164 SAVHAAAALIVLVSTALLAYIS 185 (193)
Q Consensus 164 ~a~~AvvpLvvLV~~aLviYv~ 185 (193)
|-++.+.-+.++...++.+|.+
T Consensus 5 Wlv~tv~G~~vi~~vG~FfYGs 26 (34)
T d2axtj1 5 WIVATVAGMGVIVIVGLFFYGA 26 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeeehhhhhhHhheeeeeeee
Confidence 5566667778888888888864
No 5
>d5easa1 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=5.49 E-value=98 Score=23.46 Aligned_cols=15 Identities=33% Similarity=0.727 Sum_probs=12.6
Q ss_pred HHHHHHHHHHhHheee
Q 046100 142 FLMLSIVNVIQIRLGM 157 (193)
Q Consensus 142 FLmlsmvnvVQIKLG~ 157 (193)
.=-|.|||.+| |||.
T Consensus 42 ~~~L~lID~Lq-RLGi 56 (197)
T d5easa1 42 ADTLNLIDIIE-RLGI 56 (197)
T ss_dssp HHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHH-HcCc
Confidence 34799999999 9995
No 6
>d2d7va1 d.227.1.1 (A:7-161) Hypothetical protein VCA0330 {Vibrio cholerae [TaxId: 666]}
Probab=5.22 E-value=2e+02 Score=19.68 Aligned_cols=19 Identities=21% Similarity=0.182 Sum_probs=14.5
Q ss_pred HHHhhhhhHHHHHHHHHHH
Q 046100 129 MTGCAIGSVMGCLFLMLSI 147 (193)
Q Consensus 129 mL~sa~GSV~Gc~FLmlsm 147 (193)
+|++|+|+..+--|++++=
T Consensus 62 LllaAlasC~~~t~~~~a~ 80 (155)
T d2d7va1 62 AFVAALSSCHMLVFLSIAA 80 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8899998887777766553
No 7
>d1vlaa_ d.227.1.2 (A:) Hypothetical protein TM0919 {Thermotoga maritima [TaxId: 2336]}
Probab=5.18 E-value=2e+02 Score=18.93 Aligned_cols=18 Identities=6% Similarity=0.010 Sum_probs=13.5
Q ss_pred HHHhhhhhHHHHHHHHHH
Q 046100 129 MTGCAIGSVMGCLFLMLS 146 (193)
Q Consensus 129 mL~sa~GSV~Gc~FLmls 146 (193)
+|++|+|+.++..+.+++
T Consensus 47 lllaala~C~~~~~~~~a 64 (144)
T d1vlaa_ 47 LVLTGLMGCTGMDVVSIL 64 (144)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888887776666554
No 8
>d1n1ba1 a.102.4.1 (A:64-270) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]}
Probab=5.13 E-value=1.1e+02 Score=23.46 Aligned_cols=16 Identities=19% Similarity=0.407 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhHheee
Q 046100 141 LFLMLSIVNVIQIRLGM 157 (193)
Q Consensus 141 ~FLmlsmvnvVQIKLG~ 157 (193)
-+=-|.|||.+| |||.
T Consensus 40 ~~~~L~lID~lq-RLGi 55 (207)
T d1n1ba1 40 PVQQLELIHDLK-YLGL 55 (207)
T ss_dssp HHHHHHHHHHHH-HTTC
T ss_pred HHHHHHHHHHHH-HcCc
Confidence 356799999999 9995
No 9
>d1sqwa2 d.17.6.3 (A:1-94) Nip7p homolog, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.97 E-value=57 Score=22.74 Aligned_cols=14 Identities=43% Similarity=0.539 Sum_probs=10.5
Q ss_pred CCcceEeeeeecce
Q 046100 25 SSTTSVHVTALDGI 38 (193)
Q Consensus 25 ~~~t~ihvtALD~i 38 (193)
+..=.+||||||-+
T Consensus 76 tgkFrL~ITaL~~L 89 (94)
T d1sqwa2 76 THKFRLHVTALDYL 89 (94)
T ss_dssp TSCEEECGGGHHHH
T ss_pred CCeEEEEEEehHhh
Confidence 34467999999965
No 10
>d1deua_ d.3.1.1 (A:) (Pro)cathepsin X {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.66 E-value=1.1e+02 Score=22.49 Aligned_cols=15 Identities=33% Similarity=0.425 Sum_probs=10.6
Q ss_pred ccCCcchhHhHHHHH
Q 046100 159 SCGSKSAVHAAAALI 173 (193)
Q Consensus 159 sCgs~~a~~AvvpLv 173 (193)
.|||-|+.+++..+-
T Consensus 60 ~CGsCWAfAa~~~lE 74 (275)
T d1deua_ 60 YCGSCWAHASTSAMA 74 (275)
T ss_dssp CCBCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHH
Confidence 588888887765554
Done!