Query 046105
Match_columns 138
No_of_seqs 113 out of 212
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 15:15:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046105.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046105hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lvf_A 2S albumin; allergen, c 100.0 9.8E-32 3.3E-36 193.5 7.6 103 35-138 4-114 (114)
2 1psy_A 2S albumin, RICC3; albu 99.9 1.1E-26 3.9E-31 169.4 6.6 97 34-135 13-124 (125)
3 1s6d_A Albumin 8; all helix, f 99.9 4.5E-26 1.6E-30 161.3 5.1 92 34-131 6-103 (103)
4 1w2q_A Conglutin, ARA H 6; all 99.9 7.3E-25 2.5E-29 160.2 8.3 99 34-136 11-124 (127)
5 1sm7_A Recombinant IB pronapin 99.9 1.9E-26 6.6E-31 164.3 -0.1 97 37-133 3-108 (109)
6 3ob4_A Conglutin, maltose ABC 99.9 3.2E-23 1.1E-27 176.4 6.7 98 37-136 371-495 (500)
7 1bea_A Bifunctional amylase/se 99.8 7E-22 2.4E-26 144.4 4.1 95 37-132 4-118 (127)
8 1b1u_A Protein (alpha-amylase/ 99.8 1.1E-21 3.7E-26 142.5 1.6 91 37-127 4-109 (122)
9 1pnb_B Napin BNIB; napin IA an 99.8 4.7E-21 1.6E-25 128.5 3.5 65 69-133 8-74 (75)
10 1hss_A 0.19 alpha-amylase inhi 99.8 9.9E-21 3.4E-25 137.7 5.5 89 35-126 3-104 (124)
11 2ds2_B Sweet protein mabinlin- 99.8 3.3E-20 1.1E-24 123.5 5.9 65 69-133 4-71 (72)
12 1pnb_A Napin BNIB; napin IA an 97.5 3.5E-05 1.2E-09 42.5 1.5 28 37-64 3-30 (31)
13 2ds2_A Sweet protein mabinlin- 97.3 0.00019 6.4E-09 40.1 2.9 27 37-63 3-29 (33)
14 1l6h_A LTP2, non-specific lipi 94.9 0.0027 9.3E-08 40.8 -1.2 63 47-130 6-69 (69)
15 2ljo_A Non-specific lipid-tran 94.6 0.0038 1.3E-07 42.5 -1.0 69 38-126 3-79 (93)
16 1n89_A Lipid transfer protein; 94.6 0.0045 1.5E-07 39.6 -0.7 62 47-129 5-67 (67)
17 1bwo_A NS-LTP1, nonspecific li 94.5 0.0023 7.8E-08 43.2 -2.4 66 39-126 3-78 (90)
18 1t12_A LTP 1, nonspecific lipi 94.4 0.004 1.4E-07 42.1 -1.1 66 38-126 3-78 (91)
19 2alg_A Non-specific lipid tran 93.7 0.027 9.2E-07 37.9 1.8 67 38-126 3-79 (92)
20 2rkn_A DIR1 protein, AT5G48485 93.5 0.0029 9.9E-08 41.3 -3.2 73 38-129 4-77 (77)
21 1afh_A Maize nonspecific lipid 92.3 0.0077 2.6E-07 40.8 -2.6 68 38-126 3-80 (93)
22 1siy_A LTP 1, NS-LTP1, nonspec 91.8 0.006 2.1E-07 41.1 -3.6 60 47-125 8-77 (91)
23 3lay_A Zinc resistance-associa 52.0 3 0.0001 31.2 0.0 10 89-98 113-122 (175)
24 2lif_A Core protein P21; signa 48.7 5.2 0.00018 21.2 0.0 17 5-23 8-24 (27)
25 4ank_A Transthyretin; hormone 31.4 10 0.00034 27.6 0.0 20 1-20 1-20 (147)
26 3o0r_C Nitric oxide reductase 28.6 25 0.00086 23.8 1.7 11 108-118 123-133 (146)
27 4e17_B Catenin alpha-1; four h 28.2 35 0.0012 19.5 1.9 15 87-101 20-34 (40)
28 2a3m_A COG3005: nitrate/TMAO r 24.2 16 0.00056 25.3 0.0 7 1-7 1-8 (130)
29 2vtc_A CEL61B, cellulase; hydr 20.7 21 0.00072 27.8 0.0 21 1-24 1-21 (249)
No 1
>2lvf_A 2S albumin; allergen, copper binding, hydrophobic interaction; NMR {Bertholletia excelsa}
Probab=99.97 E-value=9.8e-32 Score=193.47 Aligned_cols=103 Identities=39% Similarity=0.812 Sum_probs=90.0
Q ss_pred CccccHHHhhhccchhhHHHHHHHhhhCCC---CCc--hhhhHHHHHHHHHcCcCCCChHHHHHHHHHHHHc-C-chhHH
Q 046105 35 RGQSCQEQFQQQQQLRHCQMFLRQQSQGGA---WDN--QQQHLRECCRQLQQLETRCRCPGLEQAVRRQQQQ-G-PFGEQ 107 (138)
Q Consensus 35 ~~~~C~~q~~~~~~L~~C~~yv~qq~~~~~---~~~--~~~~~~qCC~qL~~v~~~CrC~aL~~~~~~~~~q-G-~~~~~ 107 (138)
++++|+++|+++++|++|++||++++.+++ +.+ .++++++||+||++|+++|||+||++||++++++ | +++++
T Consensus 4 ~~q~C~~q~q~~~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~~l~~CC~qL~qv~~~CrC~aL~~~v~~~~qq~~~~~~~~ 83 (114)
T 2lvf_A 4 AQEECREQMQRQQMLSHCRMYMRQQMEESTYQTMPRRGMEPHMSECCEQLEGMDESCRCEGLRMMMRMMQQKEMQPRGEQ 83 (114)
T ss_dssp THHHHHHHHHHCTHHHHHHHHHHHHHHTTTTCSCCSSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHCCCCSHH
T ss_pred hhHhhHHHHHHhHhHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHHHHCCcCccCHHHHHHHHHHHHHHhhhhhhH
Confidence 567999999777899999999999998752 222 3467999999999999999999999999998765 5 67888
Q ss_pred -HHHHHHHHhccccCCCCCCCCCCCCCCCCCC
Q 046105 108 -QEMFETASEIPRMCQMQPLRGCDFRSLYTSF 138 (138)
Q Consensus 108 -~~~~~~A~~LP~~Cnl~p~~~C~~~~~~~~~ 138 (138)
++++++|+|||++|||+|.+ |+|++++|.|
T Consensus 84 ~~~~~q~A~~LP~~C~i~p~~-C~f~~~~~g~ 114 (114)
T 2lvf_A 84 MRRMMRLAENIPSRCNLSPMR-CPMGGSIAGF 114 (114)
T ss_dssp HHHHHHHHHHHHHHHCCCCSC-CTTTTCSSCC
T ss_pred HHHHHHHHHhChHhcCCCccc-CCCCCCCCCC
Confidence 99999999999999999977 9999988876
No 2
>1psy_A 2S albumin, RICC3; albumin SEED protein, SEED storage protein, plant protein; NMR {Ricinus communis} SCOP: a.52.1.3
Probab=99.93 E-value=1.1e-26 Score=169.41 Aligned_cols=97 Identities=31% Similarity=0.648 Sum_probs=81.5
Q ss_pred CCccccHHHhhhccchhhHHHHHHHhhhCC--C---CC------ch-h-hhHHHHHHHHHcCcCCCChHHHHHHHHHHHH
Q 046105 34 PRGQSCQEQFQQQQQLRHCQMFLRQQSQGG--A---WD------NQ-Q-QHLRECCRQLQQLETRCRCPGLEQAVRRQQQ 100 (138)
Q Consensus 34 ~~~~~C~~q~~~~~~L~~C~~yv~qq~~~~--~---~~------~~-~-~~~~qCC~qL~~v~~~CrC~aL~~~~~~~~~ 100 (138)
+++++|+++| ++.+|++|++||++++..+ + ++ +. + +++++||+||+.|+++|||+||++||+++.+
T Consensus 13 ~~~q~C~~e~-qq~~L~~Cq~yv~qq~~~~~~~~~~~~~~~~e~~~qe~~~~qqCC~qL~~~~~~C~C~aL~~~v~~~~q 91 (125)
T 1psy_A 13 SSSQQCRQEV-QRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQ 91 (125)
T ss_dssp SSSSSHHHHH-TTSTTSSHHHHHHSSSCCCCSCSCCCCSSCSSSCSSSCHHHHHHHHHHTTCCSSHHHHHHHHHHHHHHH
T ss_pred CcccccHHHH-HHhhHHHHHHHHHHHHhcccCcchhhhcchhhcccccHHHHHHHHHHHHhcCcccccHHHHHHHHHHHH
Confidence 4567899999 5678999999999998653 1 11 21 2 4699999999999999999999999999888
Q ss_pred cC-chhHH-HHHHHHHHhccccCCCCCCCCCCCCCCC
Q 046105 101 QG-PFGEQ-QEMFETASEIPRMCQMQPLRGCDFRSLY 135 (138)
Q Consensus 101 qG-~~~~~-~~~~~~A~~LP~~Cnl~p~~~C~~~~~~ 135 (138)
+| ++|++ ++++++|++||++||| + |+|++.+
T Consensus 92 Qgq~~gqq~~~~~q~A~~LP~~C~i---~-C~~~~~~ 124 (125)
T 1psy_A 92 QGQLHGEESERVAQRAGEIVSSCGV---R-CMRQTRT 124 (125)
T ss_dssp HTTCCTTCSHHHHHHHHHHHHHHTC---S-TTTSCCC
T ss_pred HhhhhHHHHHHHHHHHHhhHHHcCC---c-CCCCCCC
Confidence 87 66777 9999999999999999 5 9998654
No 3
>1s6d_A Albumin 8; all helix, folded LEAF, right-handed superhelix, disulphide rich, plant protein; NMR {Helianthus annuus} SCOP: a.52.1.3
Probab=99.92 E-value=4.5e-26 Score=161.26 Aligned_cols=92 Identities=22% Similarity=0.578 Sum_probs=78.2
Q ss_pred CCccccHHHhhhccchhhHHHHHHHhhhCC-CCC---chhhhHHHHHHHHHcCcCCCChHHHHHHHHHHHHcC-chhHH-
Q 046105 34 PRGQSCQEQFQQQQQLRHCQMFLRQQSQGG-AWD---NQQQHLRECCRQLQQLETRCRCPGLEQAVRRQQQQG-PFGEQ- 107 (138)
Q Consensus 34 ~~~~~C~~q~~~~~~L~~C~~yv~qq~~~~-~~~---~~~~~~~qCC~qL~~v~~~CrC~aL~~~~~~~~~qG-~~~~~- 107 (138)
+++++|+++|++.++|++|++||++++.++ ++. ++++++++||++|++|+++|||+||+++| +| ++|++
T Consensus 6 ~~~q~C~qq~q~~q~L~~Cq~yv~qq~~~~~~~~~~~~~e~~~qqCC~qL~~~~~~CrC~al~~~~-----Q~q~~g~q~ 80 (103)
T 1s6d_A 6 RTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMML-----NEPMWIRMR 80 (103)
T ss_dssp CCSSSHHHHHHHTCSTTHHHHHHTTTTSSCCCCSSSCCCCCCSHHHHHHHHHSCGGGSSHHHHHHT-----TSTTCSSTH
T ss_pred CCCcccHHHHHhChhHHHHHHHHHHHhhccCCcccccccHHHHHHHHHHHHhcCcccCcHHHHHHH-----HHHhcchhH
Confidence 456789999965677999999999998764 553 23567999999999999999999999999 33 66666
Q ss_pred HHHHHHHHhccccCCCCCCCCCCC
Q 046105 108 QEMFETASEIPRMCQMQPLRGCDF 131 (138)
Q Consensus 108 ~~~~~~A~~LP~~Cnl~p~~~C~~ 131 (138)
.+++++|++||++|||+|.+ |+|
T Consensus 81 ~~~~q~A~~LP~~C~i~p~~-C~~ 103 (103)
T 1s6d_A 81 DQVMSMAHNLPIECNLMSQP-CQM 103 (103)
T ss_dssp HHHHHHHHHHHHHTTSSSSC-SCC
T ss_pred HHHHHHHHhcHHhcCCCccc-CCC
Confidence 88999999999999999988 987
No 4
>1w2q_A Conglutin, ARA H 6; allergen, allergene; NMR {Arachis hypogaea}
Probab=99.91 E-value=7.3e-25 Score=160.24 Aligned_cols=99 Identities=22% Similarity=0.530 Sum_probs=80.6
Q ss_pred CCccccHHHhhhccchhhHHHHHHHhhhCC-----CC--Cc--hhhhHHHHHHHHHcC--cCCCChHHHHHHHHHHHHcC
Q 046105 34 PRGQSCQEQFQQQQQLRHCQMFLRQQSQGG-----AW--DN--QQQHLRECCRQLQQL--ETRCRCPGLEQAVRRQQQQG 102 (138)
Q Consensus 34 ~~~~~C~~q~~~~~~L~~C~~yv~qq~~~~-----~~--~~--~~~~~~qCC~qL~~v--~~~CrC~aL~~~~~~~~~qG 102 (138)
+++++|+++| ++.+|++|++||++++... +| .+ +++++++||++|++| +++|||+||+++|++. +|
T Consensus 11 ~~~qqC~qq~-q~~qL~~Cq~yl~q~~~~~~~~~~~~~~~~~~~e~~lqqCC~qL~q~~~~~qCrCeaL~q~~Q~q--q~ 87 (127)
T 1w2q_A 11 GDSSSCERQV-DRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQ--CD 87 (127)
T ss_dssp STTCCHHHHH-TTCCCHHHHHHHHTGGGSSSSSCSCCCTTSCCHHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHS--CT
T ss_pred CcccccHHHH-HHhhHHHHHHHHHHHHhhccCCccchhhcccccHHHHHHHHHHHHhhccCCCccCHHHHHHHHHH--Hh
Confidence 5567899999 5555999999999998753 23 22 245699999999999 9999999999999332 33
Q ss_pred -chhHH-H-HHHHHHHhccccCCC-CCCCCCCCCCCCC
Q 046105 103 -PFGEQ-Q-EMFETASEIPRMCQM-QPLRGCDFRSLYT 136 (138)
Q Consensus 103 -~~~~~-~-~~~~~A~~LP~~Cnl-~p~~~C~~~~~~~ 136 (138)
+++++ + +++++|++||++||| .|.+ |+|++++|
T Consensus 88 q~~gqq~~~~~~q~A~~LP~~C~i~~~~~-C~~~~~~g 124 (127)
T 1w2q_A 88 RLQDRQMVQQFKRELMSLPQQCNFRAPQR-CDLDVSGG 124 (127)
T ss_dssp TTTTSTTHHHHHHHHHHHHHHHTCCCSSC-CSCSSSCC
T ss_pred hhhhHHHHHHHHHHHHHhHHhcCCCCCCc-CCCCCCCC
Confidence 66777 6 899999999999999 6766 99998876
No 5
>1sm7_A Recombinant IB pronapin; all alpha-helix, right-handed superhelix, plant protein; NMR {Brassica napus}
Probab=99.91 E-value=1.9e-26 Score=164.26 Aligned_cols=97 Identities=36% Similarity=0.734 Sum_probs=82.8
Q ss_pred cccHHHhhhccchhhHHHHHHHhhhCCCC-Cc------hhhhHHHHHHHHHcCcCCCChHHHHHHHHHHHHcC-chhHH-
Q 046105 37 QSCQEQFQQQQQLRHCQMFLRQQSQGGAW-DN------QQQHLRECCRQLQQLETRCRCPGLEQAVRRQQQQG-PFGEQ- 107 (138)
Q Consensus 37 ~~C~~q~~~~~~L~~C~~yv~qq~~~~~~-~~------~~~~~~qCC~qL~~v~~~CrC~aL~~~~~~~~~qG-~~~~~- 107 (138)
++|+++|++.++|++|++||++++.++++ .+ +++.+++||+||++|+++|||+||+.+|+++..+| +++++
T Consensus 3 ~~C~~q~q~~q~L~~C~~yv~qq~~~~~~~~~~~~~~~~~~~~qqCC~qL~~v~~qCrC~al~~~v~~~~~qgq~~~~~~ 82 (109)
T 1sm7_A 3 QKCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQS 82 (109)
T ss_dssp HHHHTTHHHHCCCSSHHHHGGGGTTSSCCCSCSSSCTTCCTTHHHHHHHTTTTCHHHHTTTTHHHHHTSSCSSCCCTTHH
T ss_pred hhhHHHHHcCccHHHHHHHHHHHhcCCCcccccccccccHHHHHHHHHHHHhcCccCCCHHHHHHHHHHHHhcccchHHH
Confidence 47999996668899999999999987543 22 23468999999999999999999999999987777 77778
Q ss_pred HHHHHHHHhccccCCCCCCCCCCCCC
Q 046105 108 QEMFETASEIPRMCQMQPLRGCDFRS 133 (138)
Q Consensus 108 ~~~~~~A~~LP~~Cnl~p~~~C~~~~ 133 (138)
++++++|++||++|||+++.+|+|..
T Consensus 83 ~~~~~~a~~LP~~Cnl~~~~~C~~~~ 108 (109)
T 1sm7_A 83 TRIYQIAKNLPNVCNMKQIGTCPFIA 108 (109)
T ss_dssp HHHHHTTSSHHHHSCCCSSCSSCCCC
T ss_pred HHHHHHHHhCHHhcCCCCCCCCCCCC
Confidence 99999999999999999654599975
No 6
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=99.88 E-value=3.2e-23 Score=176.38 Aligned_cols=98 Identities=30% Similarity=0.628 Sum_probs=75.6
Q ss_pred cccHHHhhhccchhhHHHHHHHhhhCCC-------C----------------CchhhhHHHHHHHHHcCc--CCCChHHH
Q 046105 37 QSCQEQFQQQQQLRHCQMFLRQQSQGGA-------W----------------DNQQQHLRECCRQLQQLE--TRCRCPGL 91 (138)
Q Consensus 37 ~~C~~q~~~~~~L~~C~~yv~qq~~~~~-------~----------------~~~~~~~~qCC~qL~~v~--~~CrC~aL 91 (138)
++|++++ ++++|++|++||++++...+ | .++++++++||+||++|+ ++|||+||
T Consensus 371 e~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cc~~l~~~~~~~~c~c~~~ 449 (500)
T 3ob4_A 371 RRCQSQL-ERANLRPCEQHLMQKIQRDEDSYERDPYSPSQDPYSPSPYDRRGAGSSQHQERCCNELNEFENNQRCMCEAL 449 (500)
T ss_dssp CCHHHHH-HHCCCHHHHHHHHHHHHTTSCC--CCCSSTTSCC---------------CHHHHHHHHGGGTTCHHHHHHHH
T ss_pred HHHHHHH-HhccCChHHHHHHHHhhccccccccCCCCcCCCCCCCCccccCCCccchHHHHHHHHHHhCCcccccccHHH
Confidence 5699999 68999999999999986531 1 346678999999999998 89999999
Q ss_pred HHHHHHHHHcCchhHH-HHHHHHHHhccccCCCC-CCCCCCCCCCCC
Q 046105 92 EQAVRRQQQQGPFGEQ-QEMFETASEIPRMCQMQ-PLRGCDFRSLYT 136 (138)
Q Consensus 92 ~~~~~~~~~qG~~~~~-~~~~~~A~~LP~~Cnl~-p~~~C~~~~~~~ 136 (138)
+++|++++++..++++ +.+.++|++||++|||+ |++ |+|++.+|
T Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~c~~~~~~~-c~~~~~~~ 495 (500)
T 3ob4_A 450 QQIMENQSDRLQGRQQEQQFKRELRNLPQQCGLRAPQR-CDLDVESG 495 (500)
T ss_dssp HHHHHHHHTTCCSSHHHHHHHHHHHTHHHHTTCCCCSC-CCCC----
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhhCchhcCCCCCcc-CCccCCCC
Confidence 9999998765223444 77778899999999999 776 99998654
No 7
>1bea_A Bifunctional amylase/serine protease inhibitor; amylase/protease bifunctional inhibitor; 1.95A {Zea mays} SCOP: a.52.1.2 PDB: 1bfa_A
Probab=99.84 E-value=7e-22 Score=144.39 Aligned_cols=95 Identities=21% Similarity=0.488 Sum_probs=73.0
Q ss_pred cccHHHhh-hccchhhHHHHHHHhhhC-CCCCchhhhHHHHHHHHHcCcCCCChHHHHHHHHHHHH-------cC----c
Q 046105 37 QSCQEQFQ-QQQQLRHCQMFLRQQSQG-GAWDNQQQHLRECCRQLQQLETRCRCPGLEQAVRRQQQ-------QG----P 103 (138)
Q Consensus 37 ~~C~~q~~-~~~~L~~C~~yv~qq~~~-~~~~~~~~~~~qCC~qL~~v~~~CrC~aL~~~~~~~~~-------qG----~ 103 (138)
..|...+. +.++|++|++||+++.++ ++..+.++++++||+||++|+++|||+||++||++.+. +| +
T Consensus 4 ~~C~pg~~~p~~pL~~CR~Yv~~q~C~~g~~~p~e~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~~~~~~~G~~~~~ 83 (127)
T 1bea_A 4 TSCVPGWAIPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDL 83 (127)
T ss_dssp -CCSBTTTBCSSCCHHHHHHHHHHHHSCCCSSCHHHHHHHHHHHHHTSCGGGHHHHHHHHHHCBCCCSSSCCCBCCCCCB
T ss_pred cccCCCcccccccchHHHHHHHHhhcccCCCCchHHHHHHHHHHHHhcCcccchHHHHHHHHhhhccccccccccccccc
Confidence 46776643 889999999999999554 44434346799999999999999999999999998652 12 2
Q ss_pred hhHH-HHHHHHHHhc--cccCCCCCC----CCCCCC
Q 046105 104 FGEQ-QEMFETASEI--PRMCQMQPL----RGCDFR 132 (138)
Q Consensus 104 ~~~~-~~~~~~A~~L--P~~Cnl~p~----~~C~~~ 132 (138)
++.. ..+++.|++| |++|||+++ + |+|-
T Consensus 84 pgC~re~~~~~A~~Lv~P~~Cnl~~~~g~~~-C~~~ 118 (127)
T 1bea_A 84 PGCPREVQRGFAATLVTEAECNLATISGVAE-CPWI 118 (127)
T ss_dssp TTBCHHHHHHHHTTTTSTTTTCCCCTTSSSC-CTTT
T ss_pred CCCcHHHHHHHHHhcCCcccCCCCCCCCCCC-CCcc
Confidence 3322 3457789999 999999988 6 9874
No 8
>1b1u_A Protein (alpha-amylase/trypsin inhibitor RATI); bifunctional, hydrolase inhibitor; 2.20A {Eleusine coracana} SCOP: a.52.1.2 PDB: 1bip_A 1tmq_B
Probab=99.82 E-value=1.1e-21 Score=142.51 Aligned_cols=91 Identities=22% Similarity=0.456 Sum_probs=70.2
Q ss_pred cccHHHhh-hccchhhHHHHHHHhhhC-CCCCchhhhHHHHHHHHHcCcCCCChHHHHHHHHHHHHc-C---------ch
Q 046105 37 QSCQEQFQ-QQQQLRHCQMFLRQQSQG-GAWDNQQQHLRECCRQLQQLETRCRCPGLEQAVRRQQQQ-G---------PF 104 (138)
Q Consensus 37 ~~C~~q~~-~~~~L~~C~~yv~qq~~~-~~~~~~~~~~~qCC~qL~~v~~~CrC~aL~~~~~~~~~q-G---------~~ 104 (138)
..|...+. ++++|++|++||++|.++ +++.+.++++++||+||++|+++|||+||++||++.+.+ | ++
T Consensus 4 ~~C~pg~~~p~~~L~~Cr~Yv~~q~C~~g~~~p~~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~~~p 83 (122)
T 1b1u_A 4 TSCIPGMAIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLP 83 (122)
T ss_dssp CSCCBTTTBCSSTTTHHHHHHHHHHHCCCCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHTCEECTTSCEECCCCCCCT
T ss_pred ccCCCCcccccccchHHHHHHHHhcccCCCCCchHHHHHHHHHHHHhCCccccHHHHHHHHHhhhhhhcccccccchhcc
Confidence 46776644 889999999999999443 444444567999999999999999999999999976532 2 23
Q ss_pred hHH-HHHHHHHHhc--cccCCCCCCC
Q 046105 105 GEQ-QEMFETASEI--PRMCQMQPLR 127 (138)
Q Consensus 105 ~~~-~~~~~~A~~L--P~~Cnl~p~~ 127 (138)
+.. ..+.++|++| |++|||++++
T Consensus 84 gC~re~~~~~A~~Lv~P~~Cnl~~~~ 109 (122)
T 1b1u_A 84 GCPRQVQRAFAPKLVTEVECNLATIH 109 (122)
T ss_dssp TCCHHHHHHHGGGTTSTTTTCCCCTT
T ss_pred CCcHHHHHHHHHhcCCcccCCCCCCC
Confidence 322 3445579999 9999999875
No 9
>1pnb_B Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=99.82 E-value=4.7e-21 Score=128.46 Aligned_cols=65 Identities=29% Similarity=0.626 Sum_probs=57.7
Q ss_pred hhhHHHHHHHHHcCcCCCChHHHHHHHHHHHHcC-chhHH-HHHHHHHHhccccCCCCCCCCCCCCC
Q 046105 69 QQHLRECCRQLQQLETRCRCPGLEQAVRRQQQQG-PFGEQ-QEMFETASEIPRMCQMQPLRGCDFRS 133 (138)
Q Consensus 69 ~~~~~qCC~qL~~v~~~CrC~aL~~~~~~~~~qG-~~~~~-~~~~~~A~~LP~~Cnl~p~~~C~~~~ 133 (138)
++.+++||+||++|+++|||+||+++|++++.+| +++++ ++++++|++||++|||+++.+|+|..
T Consensus 8 ~~~~qqCC~qL~~~~~~CrC~aL~~~~~~~~~qgq~~~~q~~~~~q~a~~LP~~Cnl~~~~~C~~~~ 74 (75)
T 1pnb_B 8 PWLREQCCNELYQEDQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQIGTCPFIA 74 (75)
T ss_dssp CSCTHHHHHHHHTSCGGGSHHHHHHHHHHHHSGGGCSSCCHHHHHHHCCSCSCSSCCTTTCCCCCCC
T ss_pred hHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHcccchHHHHHHHHHHHhhHHhcCCCCCCCCCcCc
Confidence 4558999999999999999999999999988777 66777 89999999999999999555599975
No 10
>1hss_A 0.19 alpha-amylase inhibitor; cereal inhibitor, animal amylase; 2.06A {Triticum aestivum} SCOP: a.52.1.2
Probab=99.82 E-value=9.9e-21 Score=137.68 Aligned_cols=89 Identities=27% Similarity=0.491 Sum_probs=66.3
Q ss_pred CccccHHHhh-hccchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCcCCCChHHHHHHHHHHHHc-C-chh------
Q 046105 35 RGQSCQEQFQ-QQQQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLETRCRCPGLEQAVRRQQQQ-G-PFG------ 105 (138)
Q Consensus 35 ~~~~C~~q~~-~~~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~~~CrC~aL~~~~~~~~~q-G-~~~------ 105 (138)
++ .|...+. +.++|++|++||++++.+.+ .+ ++++++||+||++|+++|||+||++||++++.+ | .++
T Consensus 3 p~-~C~pG~~~p~~pL~~Cr~Yv~~~C~g~~-~p-~~~~~~CC~QL~~i~~~CRC~ALr~m~~~~~~~~g~~~g~~~~e~ 79 (124)
T 1hss_A 3 PW-MCYPGQAFQVPALPACRPLLRLQCNGSQ-VP-EAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAQEGQAGTGA 79 (124)
T ss_dssp ---CCCBTTTBCSSCCTTHHHHHHHHTTTCC-CC-HHHHHHHHHHHHTSCTTTHHHHHHHHHHHHHHHC---------CC
T ss_pred Cc-ccCCCcccccCcchHHHHHHHHHccCCC-Cc-HHHHHHHHHHHHhcCcccchHHHHHHHHhhhhhhhhhccccchhh
Confidence 44 7876644 88999999999999985322 12 457899999999999999999999999987653 3 222
Q ss_pred ---HHH-HHHHHHHhccccCCCCCC
Q 046105 106 ---EQQ-EMFETASEIPRMCQMQPL 126 (138)
Q Consensus 106 ---~~~-~~~~~A~~LP~~Cnl~p~ 126 (138)
..+ .+.+.|.+||++|||+++
T Consensus 80 ~pgCrre~~~~~A~~LP~~Cnl~~~ 104 (124)
T 1hss_A 80 FPRCRREVVKLTAASITAVCRLPIV 104 (124)
T ss_dssp STTCCHHHHHHHHTTHHHHTTCCEE
T ss_pred ccCCcHHHHHHHHHhchhhcCCCCC
Confidence 112 333479999999999976
No 11
>2ds2_B Sweet protein mabinlin-2 chain B; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=99.80 E-value=3.3e-20 Score=123.52 Aligned_cols=65 Identities=34% Similarity=0.793 Sum_probs=56.6
Q ss_pred hhhHHHHHHHHHcCcCCCChHHHHHHHHHHHHcC--chhHH-HHHHHHHHhccccCCCCCCCCCCCCC
Q 046105 69 QQHLRECCRQLQQLETRCRCPGLEQAVRRQQQQG--PFGEQ-QEMFETASEIPRMCQMQPLRGCDFRS 133 (138)
Q Consensus 69 ~~~~~qCC~qL~~v~~~CrC~aL~~~~~~~~~qG--~~~~~-~~~~~~A~~LP~~Cnl~p~~~C~~~~ 133 (138)
++.+++||++|++|+++|||+||+++++++.++| ++|++ ++++++|++||++|||+|+.+|+|++
T Consensus 4 ~~~~qqCC~eL~~~~~~CrC~aL~~~~~~~~qqgq~~~~qq~~~~~q~a~~LP~~C~l~~~~~C~~~~ 71 (72)
T 2ds2_B 4 RPALRQCCNQLRQVDRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPNIGACPFRA 71 (72)
T ss_dssp -CHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHTTCTTCCCCCCCC
T ss_pred chHHHHHHHHHHhcCccccCHHHHHHHHHHHHhhhhhchHHHHHHHHHHHhhHHhcCCCCCCcCCCCc
Confidence 4568999999999999999999999999887765 56777 99999999999999999544499986
No 12
>1pnb_A Napin BNIB; napin IA and IB, albumin SEED protein, SEED storage protein; NMR {Brassica napus} SCOP: a.52.1.3
Probab=97.49 E-value=3.5e-05 Score=42.49 Aligned_cols=28 Identities=54% Similarity=0.948 Sum_probs=24.7
Q ss_pred cccHHHhhhccchhhHHHHHHHhhhCCC
Q 046105 37 QSCQEQFQQQQQLRHCQMFLRQQSQGGA 64 (138)
Q Consensus 37 ~~C~~q~~~~~~L~~C~~yv~qq~~~~~ 64 (138)
++|+++|++.++|++|++||+++...+|
T Consensus 3 ~kCqkeFqq~QhLRaCQq~~r~qa~q~~ 30 (31)
T 1pnb_A 3 QKCQREFQQEQHLRACQQWIRQQLAGSP 30 (31)
T ss_dssp HHHHHHHHHHTCCSTTHHHHHHTTCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999986544
No 13
>2ds2_A Sweet protein mabinlin-2 chain A; plant protein, SEED storage protein; 1.70A {Capparis masaikai}
Probab=97.29 E-value=0.00019 Score=40.09 Aligned_cols=27 Identities=48% Similarity=0.826 Sum_probs=23.7
Q ss_pred cccHHHhhhccchhhHHHHHHHhhhCC
Q 046105 37 QSCQEQFQQQQQLRHCQMFLRQQSQGG 63 (138)
Q Consensus 37 ~~C~~q~~~~~~L~~C~~yv~qq~~~~ 63 (138)
.+|+++|++.++|++|+.||+++...|
T Consensus 3 ~~CqkeFqq~QhLRaCQq~l~~qa~qG 29 (33)
T 2ds2_A 3 WRCQRQFLQHQRLRACQRFIHRRAQFG 29 (33)
T ss_dssp -CHHHHHHHTGGGHHHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 479999999999999999999998653
No 14
>1l6h_A LTP2, non-specific lipid transfer protein; NSLTP2, plant LTP, lipid transport; NMR {Oryza sativa} SCOP: a.52.1.1
Probab=94.85 E-value=0.0027 Score=40.83 Aligned_cols=63 Identities=19% Similarity=0.363 Sum_probs=42.4
Q ss_pred cchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCcCCCChHHHHHH-HHHHHHcCchhHHHHHHHHHHhccccCCCCC
Q 046105 47 QQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLETRCRCPGLEQA-VRRQQQQGPFGEQQEMFETASEIPRMCQMQP 125 (138)
Q Consensus 47 ~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~~~CrC~aL~~~-~~~~~~qG~~~~~~~~~~~A~~LP~~Cnl~p 125 (138)
..|.+|..||... ..+...||..|+.. ..|.|..|+.. +...... ..|+.||+.||+..
T Consensus 6 ~~L~pC~~~v~~~---------~~Ps~~CC~~lk~~-~~ClC~~~k~~~~~~~in~----------~~A~~Lp~~Cgv~~ 65 (69)
T 1l6h_A 6 GQLTVCTGAIAGG---------ARPTAACCSSLRAQ-QGCFCQFAKDPRYGRYVNS----------PNARKAVSSCGIAL 65 (69)
T ss_dssp TTHHHHHHHHTTC---------CSTTHHHHHHHHHH-HHHHHHHTTCSSHHHHTTT----------TTGGGCCCCCSSCS
T ss_pred hhcccCHHHHcCC---------CCCCHHHHHhhCCC-CCCCCccccCcccccccCH----------HHHHHHHHHcCCCC
Confidence 5689999999531 12446899999976 78999777521 1111111 14899999999985
Q ss_pred CCCCC
Q 046105 126 LRGCD 130 (138)
Q Consensus 126 ~~~C~ 130 (138)
+. |.
T Consensus 66 P~-C~ 69 (69)
T 1l6h_A 66 PT-CH 69 (69)
T ss_dssp CC-CC
T ss_pred CC-CC
Confidence 55 73
No 15
>2ljo_A Non-specific lipid-transfer protein 2; lipid transport; NMR {Lens culinaris}
Probab=94.60 E-value=0.0038 Score=42.52 Aligned_cols=69 Identities=22% Similarity=0.418 Sum_probs=45.9
Q ss_pred ccHHHhhhccchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCc--------CCCChHHHHHHHHHHHHcCchhHHHH
Q 046105 38 SCQEQFQQQQQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLE--------TRCRCPGLEQAVRRQQQQGPFGEQQE 109 (138)
Q Consensus 38 ~C~~q~~~~~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~--------~~CrC~aL~~~~~~~~~qG~~~~~~~ 109 (138)
.|...+ ..|.+|-.||.- ++ .+...||.-++.+. ++|-|..|+....... |+
T Consensus 3 sC~~v~---~~L~pCl~Yv~g---~~------~p~~~CC~gv~~l~~~a~t~~dr~~~C~clk~~a~~~~--~i------ 62 (93)
T 2ljo_A 3 SCGAVT---SDLSPCLTYLTG---GP------GPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSIT--KL------ 62 (93)
T ss_dssp SSHHHH---HHHHHHHHHHTT---SS------CCCHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHGGGCT--TC------
T ss_pred CHHHHH---HHHHhHHHHHcC---CC------CCCCchhhHHHHHHHHhcCcccHHHHHHhHHhhhhccC--Cc------
Confidence 366554 779999999952 11 12357999777663 5799999986543321 11
Q ss_pred HHHHHHhccccCCCCCC
Q 046105 110 MFETASEIPRMCQMQPL 126 (138)
Q Consensus 110 ~~~~A~~LP~~Cnl~p~ 126 (138)
-..+|..||+.||+..+
T Consensus 63 n~~~a~~LP~~CgV~~p 79 (93)
T 2ljo_A 63 NTNNAAALPGKCGVNIP 79 (93)
T ss_dssp CHHHHHHHHHHHTCCCS
T ss_pred CHHHHHhhhHhcCCCCC
Confidence 12368899999999754
No 16
>1n89_A Lipid transfer protein; lipid transport; HET: PGM; NMR {Triticum turgidum subsp} SCOP: a.52.1.1 PDB: 1tuk_A*
Probab=94.56 E-value=0.0045 Score=39.56 Aligned_cols=62 Identities=19% Similarity=0.386 Sum_probs=41.6
Q ss_pred cchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCcCCCChHHHHHHH-HHHHHcCchhHHHHHHHHHHhccccCCCCC
Q 046105 47 QQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLETRCRCPGLEQAV-RRQQQQGPFGEQQEMFETASEIPRMCQMQP 125 (138)
Q Consensus 47 ~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~~~CrC~aL~~~~-~~~~~qG~~~~~~~~~~~A~~LP~~Cnl~p 125 (138)
..|.+|..||... + .+...||..|+.. ..|.|.-|+... ..... ...|+.||+.||+..
T Consensus 5 ~~L~pC~~~v~~~---~------~Ps~~CC~~lk~~-~~ClC~~~k~~~~~~~in----------~~~A~~Lp~~Cgv~~ 64 (67)
T 1n89_A 5 SQLAVCASAILSG---A------KPSGECCGNLRAQ-QGCFCQYAKDPTYGQYIR----------SPHARDTLTSCGLAV 64 (67)
T ss_dssp STTHHHHHHHTTC---C------CCCHHHHHHHHHH-SSHHHHGGGCSTTHHHHT----------CHHHHHHHHHHTSCC
T ss_pred hhcccCHHHHcCC---C------CCCHHHHHhhCCC-CCCCCccccCcccccccC----------HHHHHHHHHHcCCCC
Confidence 5689999999531 1 2346899999976 789997765211 00011 125899999999984
Q ss_pred CCCC
Q 046105 126 LRGC 129 (138)
Q Consensus 126 ~~~C 129 (138)
+. |
T Consensus 65 P~-C 67 (67)
T 1n89_A 65 PH-C 67 (67)
T ss_dssp SC-C
T ss_pred CC-C
Confidence 44 5
No 17
>1bwo_A NS-LTP1, nonspecific lipid-transfer protein; wheat, lipid binding, crystallography; HET: LPC; 2.10A {Triticum aestivum} SCOP: a.52.1.1 PDB: 1cz2_A* 1gh1_A 1be2_A* 1jtb_A* 1lip_A 1mid_A* 3cee_A* 3gsh_A*
Probab=94.46 E-value=0.0023 Score=43.22 Aligned_cols=66 Identities=21% Similarity=0.479 Sum_probs=42.8
Q ss_pred cHHHhhhccchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCc----------CCCChHHHHHHHHHHHHcCchhHHH
Q 046105 39 CQEQFQQQQQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLE----------TRCRCPGLEQAVRRQQQQGPFGEQQ 108 (138)
Q Consensus 39 C~~q~~~~~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~----------~~CrC~aL~~~~~~~~~qG~~~~~~ 108 (138)
|...+ ..|.+|-.||.-. + . +...||..|+.+. ..|.| |+...... . |+
T Consensus 3 C~~v~---~~L~pCl~y~~~~---~-----~-Ps~~CC~~lk~l~~~a~t~~dr~~~ClC--lk~~~~~~-~-~i----- 61 (90)
T 1bwo_A 3 CGHVD---SLVRPCLSYVQGG---P-----G-PSGQCCDGVKNLHNQARSQSDRQSACNC--LKGIARGI-H-NL----- 61 (90)
T ss_dssp HHHHH---HHHGGGHHHHTTC---S-----C-CCHHHHHHHHHHHHHCCSHHHHHHHHHH--HHHHHTTC-T-TC-----
T ss_pred HHHHH---HhhcccHHHHcCC---C-----C-CCHHHhHHHHHHHhhccCCCCCCccCcC--ccCchhcc-C-Cc-----
Confidence 55544 6789999999532 1 1 3458999999875 36888 54332221 0 21
Q ss_pred HHHHHHHhccccCCCCCC
Q 046105 109 EMFETASEIPRMCQMQPL 126 (138)
Q Consensus 109 ~~~~~A~~LP~~Cnl~p~ 126 (138)
-...|..||+.||+...
T Consensus 62 -n~~~A~~LP~~C~v~~p 78 (90)
T 1bwo_A 62 -NEDNARSIPPKCGVNLP 78 (90)
T ss_dssp -CHHHHHTHHHHHTCCCS
T ss_pred -CHHHHHHHHHHcCCCCC
Confidence 12368899999999743
No 18
>1t12_A LTP 1, nonspecific lipid-transfer protein 1; cystein rich protein, lipid transport; NMR {Nicotiana tabacum}
Probab=94.45 E-value=0.004 Score=42.09 Aligned_cols=66 Identities=26% Similarity=0.572 Sum_probs=42.9
Q ss_pred ccHHHhhhccchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCc----------CCCChHHHHHHHHHHHHcCchhHH
Q 046105 38 SCQEQFQQQQQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLE----------TRCRCPGLEQAVRRQQQQGPFGEQ 107 (138)
Q Consensus 38 ~C~~q~~~~~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~----------~~CrC~aL~~~~~~~~~qG~~~~~ 107 (138)
.|...+ ..|.+|-.||... + . +. .||..|+.+. ..|.| ++...... . |+
T Consensus 3 ~C~~v~---~~L~pCl~y~~~~---~-----~-P~-~CC~gv~~l~~~a~t~~dr~~~ClC--lk~~~~~~-~-~i---- 61 (91)
T 1t12_A 3 TCGQVT---SNLAPCLAYLRNT---G-----P-LG-RCCGGVKALVNSARTTEDRQIACTC--LKSAAGAI-S-GI---- 61 (91)
T ss_dssp CHHHHH---HHTHHHHHHHTTS---S-----C-CT-THHHHHHHHHHTTCSTHHHHHHHHH--HHHHHHHC-T-TC----
T ss_pred ChHHHH---HhccCcHHHHcCC---C-----C-hH-HHHHHHHHHHhhccCCCCCCccCCC--cccccccc-C-Cc----
Confidence 366544 6799999999532 1 2 33 8999999974 36888 44333321 1 22
Q ss_pred HHHHHHHHhccccCCCCCC
Q 046105 108 QEMFETASEIPRMCQMQPL 126 (138)
Q Consensus 108 ~~~~~~A~~LP~~Cnl~p~ 126 (138)
-...|..||+.||+...
T Consensus 62 --n~~~A~~LP~~C~v~~p 78 (91)
T 1t12_A 62 --NLGKAAGLPSTCGVNIP 78 (91)
T ss_dssp --CHHHHHHHHHHTTCCCS
T ss_pred --ChhHHHHHHHHcCCCCC
Confidence 12368899999999753
No 19
>2alg_A Non-specific lipid transfer protein; LTP, NS-LTP, FOOD allergen, lipid transport; HET: DAO P6G; 2.30A {Prunus persica} PDB: 2b5s_A*
Probab=93.67 E-value=0.027 Score=37.92 Aligned_cols=67 Identities=21% Similarity=0.484 Sum_probs=43.0
Q ss_pred ccHHHhhhccchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCc----------CCCChHHHHHHHHHHHHcCchhHH
Q 046105 38 SCQEQFQQQQQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLE----------TRCRCPGLEQAVRRQQQQGPFGEQ 107 (138)
Q Consensus 38 ~C~~q~~~~~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~----------~~CrC~aL~~~~~~~~~qG~~~~~ 107 (138)
.|...+ ..|.+|-.||... + . +...||..|+.+. ..|.|.- ..... +. |+
T Consensus 3 ~C~~v~---~~L~pCl~y~~~~---~-----~-p~~~CC~~lk~l~~~a~t~~d~~~~ClC~~--~~~~~-~~-~i---- 62 (92)
T 2alg_A 3 TCGQVS---SSLAPCIPYVRGG---G-----A-VPPACCNGIRNVNNLARTTPDRQAACNCLK--QLSAS-VP-GV---- 62 (92)
T ss_dssp CHHHHH---HHHGGGHHHHHHC---S-----C-CCHHHHHHHHHHHHHCCSHHHHHHHHHHHH--HHHHH-ST-TC----
T ss_pred ChHHHH---HhccCcHHHHcCC---C-----C-CCHHHHHHHHHHHhhhcccCCCCcCCcccc--Ccccc-cC-cc----
Confidence 366544 5799999999742 1 1 2248999999974 4799973 22211 11 21
Q ss_pred HHHHHHHHhccccCCCCCC
Q 046105 108 QEMFETASEIPRMCQMQPL 126 (138)
Q Consensus 108 ~~~~~~A~~LP~~Cnl~p~ 126 (138)
-...|..||+.||+..+
T Consensus 63 --n~~~A~~LP~~Cgv~~p 79 (92)
T 2alg_A 63 --NPNNAAALPGKCGVSIP 79 (92)
T ss_dssp --CHHHHHHHHHHTTCCCS
T ss_pred --ChHHHHHHHHHcCCCCC
Confidence 12358899999999743
No 20
>2rkn_A DIR1 protein, AT5G48485; LTP, defense signaling protein, signaling protein, lipid TRA; HET: LP3; 1.60A {Arabidopsis thaliana}
Probab=93.55 E-value=0.0029 Score=41.32 Aligned_cols=73 Identities=22% Similarity=0.444 Sum_probs=46.7
Q ss_pred ccHHHhhhccchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCcCCCChHHHHH-HHHHHHHcCchhHHHHHHHHHHh
Q 046105 38 SCQEQFQQQQQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLETRCRCPGLEQ-AVRRQQQQGPFGEQQEMFETASE 116 (138)
Q Consensus 38 ~C~~q~~~~~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~~~CrC~aL~~-~~~~~~~qG~~~~~~~~~~~A~~ 116 (138)
.|...+ ..|.+|..||...- . ..+...||..|+..+..|.|..+.. .+... |+ -...|..
T Consensus 4 ~C~~~~---~~L~pC~~yv~~~~--~-----~~Ps~~CC~~lk~~~~~ClC~~~~~~~~~~~---gi------n~~~A~~ 64 (77)
T 2rkn_A 4 LCGMSQ---DELNECKPAVSKEN--P-----TSPSQPCCTALQHADFACLCGYKNSPWLGSF---GV------DPELASA 64 (77)
T ss_dssp BTTBCH---HHHHHHGGGGBSSS--C-----CCCCHHHHHHHTTCCHHHHHTTTTCHHHHHH---TB------CHHHHHH
T ss_pred hHHhHH---HhHhhCHHHHcCCC--C-----CCCCHHHHHHHHhcCcCCcCcccCCcchhhc---Cc------CHHHHHH
Confidence 355444 56889999995411 0 1234689999998788999986652 11111 21 1236899
Q ss_pred ccccCCCCCCCCC
Q 046105 117 IPRMCQMQPLRGC 129 (138)
Q Consensus 117 LP~~Cnl~p~~~C 129 (138)
||+.||+..+..|
T Consensus 65 LP~~Cgv~~p~~C 77 (77)
T 2rkn_A 65 LPKQCGLANAPTC 77 (77)
T ss_dssp HHHHTTCSCCCCC
T ss_pred HHHHcCCCCCCCC
Confidence 9999999843225
No 21
>1afh_A Maize nonspecific lipid transfer protein; lipid-binding protein, molecular modeling,; NMR {Zea mays} SCOP: a.52.1.1 PDB: 1fk0_A* 1fk1_A* 1fk2_A* 1fk3_A* 1fk4_A* 1fk5_A* 1fk6_A* 1fk7_A* 1mzl_A 1mzm_A* 1bv2_A 1rzl_A* 1uva_A* 1uvb_A* 1uvc_A*
Probab=92.28 E-value=0.0077 Score=40.76 Aligned_cols=68 Identities=26% Similarity=0.545 Sum_probs=42.8
Q ss_pred ccHHHhhhccchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCc----------CCCChHHHHHHHHHHHHcCchhHH
Q 046105 38 SCQEQFQQQQQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLE----------TRCRCPGLEQAVRRQQQQGPFGEQ 107 (138)
Q Consensus 38 ~C~~q~~~~~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~----------~~CrC~aL~~~~~~~~~qG~~~~~ 107 (138)
.|...+ ..|.+|-.||... + ..+...||..|+.+. .-|.| +....... . |+
T Consensus 3 ~C~~v~---~~L~pCl~y~~~~---~-----~~Ps~~CC~gv~~l~~~a~t~~dr~~~ClC--~~~~~~~~-~-~i---- 63 (93)
T 1afh_A 3 SCGQVA---SAIAPCISYARGQ---G-----SGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAAAGV-S-GL---- 63 (93)
T ss_dssp SSHHHH---HHHGGGHHHHTTS---C-----CSCCHHHHHHHHHHHHHCCSSHHHHHHHHH--HHHHHTTS-T-TC----
T ss_pred ChHHHH---HhccCcHHHHcCC---C-----CCChHHHHHHHHHHHHhhcCCCCCcccCEe--eccccccc-c-Cc----
Confidence 366655 6799999999532 1 122358999999994 35777 33322111 1 21
Q ss_pred HHHHHHHHhccccCCCCCC
Q 046105 108 QEMFETASEIPRMCQMQPL 126 (138)
Q Consensus 108 ~~~~~~A~~LP~~Cnl~p~ 126 (138)
-...|..||+.||+...
T Consensus 64 --n~~~A~~LP~~C~v~~p 80 (93)
T 1afh_A 64 --NAGNAASIPSKCGVSIP 80 (93)
T ss_dssp --CHHHHHHHHHHHHCCCS
T ss_pred --CHHHHHHHHHHcCCCCC
Confidence 12368899999999753
No 22
>1siy_A LTP 1, NS-LTP1, nonspecific lipid-transfer protein 1; alpha helix, lipid binding protein; NMR {Vigna radiata var}
Probab=91.76 E-value=0.006 Score=41.13 Aligned_cols=60 Identities=23% Similarity=0.504 Sum_probs=38.3
Q ss_pred cchhhHHHHHHHhhhCCCCCchhhhHHHHHHHHHcCc----------CCCChHHHHHHHHHHHHcCchhHHHHHHHHHHh
Q 046105 47 QQLRHCQMFLRQQSQGGAWDNQQQHLRECCRQLQQLE----------TRCRCPGLEQAVRRQQQQGPFGEQQEMFETASE 116 (138)
Q Consensus 47 ~~L~~C~~yv~qq~~~~~~~~~~~~~~qCC~qL~~v~----------~~CrC~aL~~~~~~~~~qG~~~~~~~~~~~A~~ 116 (138)
..|.+|..||... + . +...||..|+.+. ..|.|- +..+... . |+ -...|..
T Consensus 8 ~~L~pCl~yv~~~---~-----~-Ps~~CC~~lk~l~~~a~t~~d~~~~ClC~--k~~~~~~-~-~i------n~~~A~~ 68 (91)
T 1siy_A 8 GNLAQCIGFLQKG---G-----V-VPPSCCTGVKNILNSSRTTADRRAVCSCL--KAAAGAV-R-GI------NPNNAEA 68 (91)
T ss_dssp HHHHHHHHHHTSC---S-----C-CCHHHHHHHHHHHTTTCSSHHHHHHHHHH--HHHTTCC-S-SC------CHHHHHH
T ss_pred HhccCcHHHHhCC---C-----C-CcHHHHHHHHHHHhhhccCCCCCcCCccc--CCccccc-C-Cc------CHHHHHH
Confidence 5689999999532 1 1 3468999999972 358773 3221111 0 21 1235889
Q ss_pred ccccCCCCC
Q 046105 117 IPRMCQMQP 125 (138)
Q Consensus 117 LP~~Cnl~p 125 (138)
||+.||+..
T Consensus 69 LP~~Cgv~~ 77 (91)
T 1siy_A 69 LPGKCGVNI 77 (91)
T ss_dssp HHHHHTCCC
T ss_pred HHHHcCCCC
Confidence 999999974
No 23
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=51.96 E-value=3 Score=31.15 Aligned_cols=10 Identities=0% Similarity=0.169 Sum_probs=4.9
Q ss_pred HHHHHHHHHH
Q 046105 89 PGLEQAVRRQ 98 (138)
Q Consensus 89 ~aL~~~~~~~ 98 (138)
.+|+..++++
T Consensus 113 akI~aL~~Ei 122 (175)
T 3lay_A 113 AKINAVAKEM 122 (175)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4555555444
No 24
>2lif_A Core protein P21; signal peptide, E1 envelope protein, transmemb membrane protein, viral protein; NMR {Hepatitis c virus jfh-1}
Probab=48.66 E-value=5.2 Score=21.18 Aligned_cols=17 Identities=24% Similarity=0.282 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHhhcccc
Q 046105 5 ALLLATFTLLFLIASASIY 23 (138)
Q Consensus 5 ~~~~Alla~ll~~a~Asa~ 23 (138)
+|++|+|..| ...||+|
T Consensus 8 iFlLaLlscL--t~Pasa~ 24 (27)
T 2lif_A 8 IFLLALLSCI--TVPVSAA 24 (27)
Confidence 4566666655 3444554
No 25
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=31.45 E-value=10 Score=27.58 Aligned_cols=20 Identities=35% Similarity=0.429 Sum_probs=0.0
Q ss_pred ChhHHHHHHHHHHHHHHhhc
Q 046105 1 MAKLALLLATFTLLFLIASA 20 (138)
Q Consensus 1 MaKl~~~~Alla~ll~~a~A 20 (138)
||++-+++..+|.|++++.|
T Consensus 1 m~~~~~~l~~la~l~~~s~a 20 (147)
T 4ank_A 1 MASHRLLLLCLAGLVFVSEA 20 (147)
T ss_dssp --------------------
T ss_pred CchHHHHHHHHHHHHhhccc
Confidence 88777676667777766544
No 26
>3o0r_C Nitric oxide reductase subunit C; oxidoreductase, electron transport, heme, iron, membrane, CY membrane; HET: HEM HEC; 2.70A {Pseudomonas aeruginosa}
Probab=28.62 E-value=25 Score=23.83 Aligned_cols=11 Identities=9% Similarity=-0.036 Sum_probs=4.8
Q ss_pred HHHHHHHHhcc
Q 046105 108 QEMFETASEIP 118 (138)
Q Consensus 108 ~~~~~~A~~LP 118 (138)
..+..-.+.|.
T Consensus 123 ~~l~ayl~~l~ 133 (146)
T 3o0r_C 123 DDLAEFLKWSS 133 (146)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 44444444433
No 27
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=28.24 E-value=35 Score=19.54 Aligned_cols=15 Identities=20% Similarity=0.457 Sum_probs=11.5
Q ss_pred ChHHHHHHHHHHHHc
Q 046105 87 RCPGLEQAVRRQQQQ 101 (138)
Q Consensus 87 rC~aL~~~~~~~~~q 101 (138)
-|+||+++++..+.+
T Consensus 20 eCnavrqALQdLlse 34 (40)
T 4e17_B 20 ECNAVRQALQDLLSE 34 (40)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 388999998887643
No 28
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=24.20 E-value=16 Score=25.32 Aligned_cols=7 Identities=43% Similarity=0.439 Sum_probs=0.0
Q ss_pred Chh-HHHH
Q 046105 1 MAK-LALL 7 (138)
Q Consensus 1 MaK-l~~~ 7 (138)
|-| |+++
T Consensus 1 Mkk~~~~~ 8 (130)
T 2a3m_A 1 MRKSLFAV 8 (130)
T ss_dssp --------
T ss_pred CchhHHHH
Confidence 555 5444
No 29
>2vtc_A CEL61B, cellulase; hydrolase, glycoside; HET: NAG; 1.6A {Hypocrea jecorina}
Probab=20.67 E-value=21 Score=27.76 Aligned_cols=21 Identities=29% Similarity=0.031 Sum_probs=1.0
Q ss_pred ChhHHHHHHHHHHHHHHhhccccc
Q 046105 1 MAKLALLLATFTLLFLIASASIYR 24 (138)
Q Consensus 1 MaKl~~~~Alla~ll~~a~Asa~r 24 (138)
|.|+++++|++ ++++.|+||-
T Consensus 1 M~~~~~l~~~~---a~a~~v~AH~ 21 (249)
T 2vtc_A 1 MKSCAILAALG---CLAGSVLGHG 21 (249)
T ss_dssp ----------------------CC
T ss_pred CchHHHHHHHH---HHHHhhhccE
Confidence 55554444332 2245556654
Done!