BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046106
(303 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 102/187 (54%), Gaps = 19/187 (10%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL- 187
ID +L + + G FGK+YR + G+EVA+K +DP++ L
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVK---AARHDPDEDISQTIENVRQEAKLF 60
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
A LKHPNI+ G C K C+V E+A+GG + + L+ ++ +P + V A+ +ARG
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARG 117
Query: 248 MAYVHR---LGLIHRDLKSDNLLI--------FSDKSIKIADFGVARIEVQTEGMTPETG 296
M Y+H + +IHRDLKS N+LI S+K +KI DFG+AR +T M+ G
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS-AAG 176
Query: 297 TYRWMAP 303
Y WMAP
Sbjct: 177 AYAWMAP 183
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (250), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 8/189 (4%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXX 178
+G + D+ I LN+ + G+FG ++R ++G +VA+KIL + E+
Sbjct: 24 QGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLR 83
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLA 237
+ L+HPNIV F+GA +P IVTEY GS+ + L K R + +
Sbjct: 84 EVAI----MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 238 VKQALDVARGMAYVHRLG--LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQT-EGMTPE 294
+ A DVA+GM Y+H ++HR+LKS NLL+ ++K+ DFG++R++ T
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA 199
Query: 295 TGTYRWMAP 303
GT WMAP
Sbjct: 200 AGTPEWMAP 208
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 8/189 (4%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXX 178
+G + D+ I LN+ + G+FG ++R ++G +VA+KIL + E+
Sbjct: 24 QGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLR 83
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLA 237
+ L+HPNIV F+GA +P IVTEY GS+ + L K R + +
Sbjct: 84 EVAI----MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 238 VKQALDVARGMAYVHRLG--LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE- 294
+ A DVA+GM Y+H ++HRDLKS NLL+ ++K+ DFG++R++ +
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXA 199
Query: 295 TGTYRWMAP 303
GT WMAP
Sbjct: 200 AGTPEWMAP 208
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 61
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G KP + IVT++ +G S+ L + + +K + A
Sbjct: 62 --LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQT 117
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
ARGM Y+H +IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+ WM
Sbjct: 118 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 177
Query: 302 AP 303
AP
Sbjct: 178 AP 179
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 24/268 (8%)
Query: 46 QTSNGGGSVAMSVDNSSVGSNESHTRI--LNHQGLRRRANDNYS-----VAHSVNRRGRV 98
+T+ G +++S +++ G N H +I L+ G + +S VA+ +
Sbjct: 98 ETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQQLVAYYSKHADGL 157
Query: 99 SHALSDDALARALMDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-E 157
H L++ S T+GL D W I L + QG FG+++ GT+NG
Sbjct: 158 CHRLTN-----VCPTSKPQTQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR 211
Query: 158 VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKG 217
VAIK L+ PE + L+H +V+ + ++ IVTEY
Sbjct: 212 VAIKTLKPGNMSPE-------AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSK 263
Query: 218 GSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIA 277
GS+ FL + + L V A +A GMAYV R+ +HRDL++ N+L+ + K+A
Sbjct: 264 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 323
Query: 278 DFGVARIEVQTEGMTPETGTY--RWMAP 303
DFG+ R+ E + + +W AP
Sbjct: 324 DFGLGRLIEDNEYTARQGAKFPIKWTAP 351
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 73
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G KP + IVT++ +G S+ L + + +K + A
Sbjct: 74 --LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQT 129
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
ARGM Y+H +IHRDLKS+N+ + D ++KI DFG+A + + G +G+ WM
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 302 AP 303
AP
Sbjct: 190 AP 191
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 24/268 (8%)
Query: 46 QTSNGGGSVAMSVDNSSVGSNESHTRI--LNHQGLRRRANDNYS-----VAHSVNRRGRV 98
+T+ G +++S +++ G N H +I L+ G + ++ VA+ +
Sbjct: 97 ETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGL 156
Query: 99 SHALSDDALARALMDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-E 157
H L+ S T+GL D W I L + QG FG+++ GT+NG
Sbjct: 157 CHRLTT-----VCPTSKPQTQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR 210
Query: 158 VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKG 217
VAIK L+ PE + L+H +V+ + ++ IVTEY
Sbjct: 211 VAIKTLKPGTMSPE-------AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSK 262
Query: 218 GSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIA 277
GS+ FL + + L V A +A GMAYV R+ +HRDL++ N+L+ + K+A
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 322
Query: 278 DFGVARIEVQTEGMTPETGTY--RWMAP 303
DFG+AR+ E + + +W AP
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAP 350
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 24/268 (8%)
Query: 46 QTSNGGGSVAMSVDNSSVGSNESHTRI--LNHQGLRRRANDNYS-----VAHSVNRRGRV 98
+T+ G +++S +++ G N H +I L+ G + ++ VA+ +
Sbjct: 97 ETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGL 156
Query: 99 SHALSDDALARALMDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-E 157
H L+ S T+GL D W I L + QG FG+++ GT+NG
Sbjct: 157 CHRLTT-----VCPTSKPQTQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR 210
Query: 158 VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKG 217
VAIK L+ PE + L+H +V+ + ++ IVTEY
Sbjct: 211 VAIKTLKPGTMSPE-------AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSK 262
Query: 218 GSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIA 277
GS+ FL + + L V A +A GMAYV R+ +HRDL++ N+L+ + K+A
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 322
Query: 278 DFGVARIEVQTEGMTPETGTY--RWMAP 303
DFG+AR+ E + + +W AP
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAP 350
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 10/187 (5%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
G ++ D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNE 59
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +H NI+ F+G KP + IVT++ +G S+ L + + +KL +
Sbjct: 60 VGV----LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-ID 113
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETG 296
A A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A ++ + G +G
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 297 TYRWMAP 303
+ WMAP
Sbjct: 174 SILWMAP 180
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 101/187 (54%), Gaps = 10/187 (5%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
G ++ D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 1 GSDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNE 59
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +H NI+ F+G KP + IVT++ +G S+ L + + +KL +
Sbjct: 60 VGV----LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-ID 113
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETG 296
A A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A ++ + G +G
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 173
Query: 297 TYRWMAP 303
+ WMAP
Sbjct: 174 SILWMAP 180
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 24/268 (8%)
Query: 46 QTSNGGGSVAMSVDNSSVGSNESHTRI--LNHQGLRRRANDNYS-----VAHSVNRRGRV 98
+T+ G +++S +++ G N H +I L+ G + ++ VA+ +
Sbjct: 180 ETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGL 239
Query: 99 SHALSDDALARALMDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-E 157
H L+ S T+GL D W I L + QG FG+++ GT+NG
Sbjct: 240 CHRLTT-----VCPTSKPQTQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR 293
Query: 158 VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKG 217
VAIK L+ PE + L+H +V+ + ++ IVTEY
Sbjct: 294 VAIKTLKPGTMSPE-------AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSK 345
Query: 218 GSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIA 277
GS+ FL + + L V A +A GMAYV R+ +HRDL++ N+L+ + K+A
Sbjct: 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 405
Query: 278 DFGVARIEVQTEGMTPETGTY--RWMAP 303
DFG+AR+ E + + +W AP
Sbjct: 406 DFGLARLIEDNEYTARQGAKFPIKWTAP 433
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 85
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G KP + IVT++ +G S+ L + + +KL + A
Sbjct: 86 --LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 141
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+ WM
Sbjct: 142 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 302 AP 303
AP
Sbjct: 202 AP 203
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 59
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G KP + IVT++ +G S+ L + + +KL + A
Sbjct: 60 --LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 115
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+ WM
Sbjct: 116 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 175
Query: 302 AP 303
AP
Sbjct: 176 AP 177
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 84
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G KP + IVT++ +G S+ L + + +KL + A
Sbjct: 85 --LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 140
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+ WM
Sbjct: 141 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 302 AP 303
AP
Sbjct: 201 AP 202
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 98/182 (53%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 57
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G KP + IVT++ +G S+ L + + +KL + A
Sbjct: 58 --LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 113
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+ WM
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 302 AP 303
AP
Sbjct: 174 AP 175
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 25/184 (13%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLA 188
ID +++ + + +GAFG + + + ++VAIK +E + L+
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--------SESERKAFIVELRQLS 57
Query: 189 TLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL-----AVKQALD 243
+ HPNIV+ GAC P+ C+V EYA+GGS+ L + PL A+ L
Sbjct: 58 RVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAE----PLPYYTAAHAMSWCLQ 111
Query: 244 VARGMAYVHRL---GLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYR 299
++G+AY+H + LIHRDLK NLL+ + ++ KI DFG A ++QT MT G+
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-CDIQTH-MTNNKGSAA 169
Query: 300 WMAP 303
WMAP
Sbjct: 170 WMAP 173
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 97/184 (52%), Gaps = 25/184 (13%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLA 188
ID +++ + + +GAFG + + + ++VAIK +E + L+
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--------SESERKAFIVELRQLS 56
Query: 189 TLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL-----AVKQALD 243
+ HPNIV+ GAC P+ C+V EYA+GGS+ L + PL A+ L
Sbjct: 57 RVNHPNIVKLYGACLNPV--CLVMEYAEGGSLYNVLHGAE----PLPYYTAAHAMSWCLQ 110
Query: 244 VARGMAYVHRL---GLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYR 299
++G+AY+H + LIHRDLK NLL+ + ++ KI DFG A ++QT MT G+
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA-CDIQTH-MTNNKGSAA 168
Query: 300 WMAP 303
WMAP
Sbjct: 169 WMAP 172
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQ----LQAFKNEV 71
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G P + IVT++ +G S+ L + + +K + A
Sbjct: 72 GVLRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQT 129
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
ARGM Y+H +IHRDLKS+N+ + D ++KI DFG+A + + G +G+ WM
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 189
Query: 302 AP 303
AP
Sbjct: 190 AP 191
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 121/268 (45%), Gaps = 24/268 (8%)
Query: 46 QTSNGGGSVAMSVDNSSVGSNESHTRI--LNHQGLRRRANDNYS-----VAHSVNRRGRV 98
+T+ G +++S +++ G N H +I L+ G + ++ VA+ +
Sbjct: 97 ETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHADGL 156
Query: 99 SHALSDDALARALMDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-E 157
H L+ S T+GL D W I L + QG FG+++ GT+NG
Sbjct: 157 CHRLTT-----VCPTSKPQTQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTR 210
Query: 158 VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKG 217
VAIK L+ PE + L+H +V+ + ++ IV EY
Sbjct: 211 VAIKTLKPGTMSPE-------AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVGEYMSK 262
Query: 218 GSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIA 277
GS+ FL + + L V A +A GMAYV R+ +HRDL++ N+L+ + K+A
Sbjct: 263 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA 322
Query: 278 DFGVARIEVQTEGMTPETGTY--RWMAP 303
DFG+AR+ E + + +W AP
Sbjct: 323 DFGLARLIEDNEYTARQGAKFPIKWTAP 350
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 24/184 (13%)
Query: 137 GDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
G+ +G FG+ + T+ GE + +K L R + + ++ + L+HPN
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKV------MRCLEHPN 68
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+++FIG K +TEY KGG++R + K + P V A D+A GMAY+H +
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARIEV----QTEGM----TPE-------TGTYR 299
+IHRDL S N L+ +K++ +ADFG+AR+ V Q EG+ P+ G
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPY 187
Query: 300 WMAP 303
WMAP
Sbjct: 188 WMAP 191
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 85
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G KP + IVT++ +G S+ L + + +KL + A
Sbjct: 86 --LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 141
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A + + G +G+ WM
Sbjct: 142 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 302 AP 303
AP
Sbjct: 202 AP 203
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
D W I L + G FG+++ GT+NG +VAIK L+ PE
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-------SFLEE 54
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ LKH +V+ + ++ IVTEY GS+ FL + R++ L V A
Sbjct: 55 AQIMKKLKHDKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQ 113
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
VA GMAY+ R+ IHRDL+S N+L+ + KIADFG+AR+ E + + +W
Sbjct: 114 VAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT 173
Query: 302 AP 303
AP
Sbjct: 174 AP 175
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 57
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G P + IVT++ +G S+ L + + +KL + A
Sbjct: 58 --LRKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 113
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A ++ + G +G+ WM
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 302 AP 303
AP
Sbjct: 174 AP 175
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 21 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 77
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G KP + IVT++ +G S+ L + + +KL + A
Sbjct: 78 --LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 133
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A + + G +G+ WM
Sbjct: 134 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 302 AP 303
AP
Sbjct: 194 AP 195
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V A +A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 97/182 (53%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W I ++ +G G+FG +Y+G ++G+ VA+K+L P++
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHGD-VAVKMLNVTAPTPQQLQAFKNEVGV-- 57
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L +H NI+ F+G KP + IVT++ +G S+ L + + +KL + A
Sbjct: 58 --LRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKL-IDIARQT 113
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYRWM 301
A+GM Y+H +IHRDLKS+N+ + D ++KI DFG+A + + G +G+ WM
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 173
Query: 302 AP 303
AP
Sbjct: 174 AP 175
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ ++H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKIRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V A +A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V A +A GMAYV R+ +HRDL + N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 2 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 55
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 56 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V + +A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 113 LVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGA 172
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 173 KFPIKWTAP 181
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L+H +V+ + ++ IVTEY G + FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQ 115
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V A +A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L+H +V+ + ++ IV EY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V A +A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGA 175
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 92/189 (48%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 2 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 55
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L+H +V+ + ++ IVTEY GS+ FL + + L
Sbjct: 56 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQ 112
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V + +A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 113 LVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 172
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 173 KFPIKWTAP 181
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 2 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-------AFLQE 54
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +V+ + ++ IVTEY GS+ FL + + L V A
Sbjct: 55 AQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQ 113
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E + + +W
Sbjct: 114 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 173
Query: 302 AP 303
AP
Sbjct: 174 AP 175
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L+H +V+ + ++ IV EY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V A +A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 4 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-------AFLQE 56
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +V+ + ++ IVTEY GS+ FL + + L V A
Sbjct: 57 AQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 115
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E + + +W
Sbjct: 116 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 175
Query: 302 AP 303
AP
Sbjct: 176 AP 177
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L+H +V+ + ++ IV EY GS+ FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQ 115
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V A +A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 99/184 (53%), Gaps = 18/184 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
W I+ ++ + G+FG +Y+G ++G+ VA+KIL+ + PE+
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQ----FQAFRNEVAV 85
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
L +H NI+ F+G K + IVT++ +G S+ + L ++ K + Q +D+AR
Sbjct: 86 LRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIAR 139
Query: 247 ----GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPETGTYR 299
GM Y+H +IHRD+KS+N+ + ++KI DFG+A ++ + G + TG+
Sbjct: 140 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVL 199
Query: 300 WMAP 303
WMAP
Sbjct: 200 WMAP 203
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 87/182 (47%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 1 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-------AFLQE 53
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +V+ + + IVTEY GS+ FL + + L V A
Sbjct: 54 AQVMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQ 112
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E + + +W
Sbjct: 113 IASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT 172
Query: 302 AP 303
AP
Sbjct: 173 AP 174
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 87/180 (48%), Gaps = 11/180 (6%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXXXX 185
W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-------AFLQEAQ 54
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
+ L+H +V+ + ++ IVTEY GS+ FL + + L V A +A
Sbjct: 55 VMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIA 113
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 303
GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E + + +W AP
Sbjct: 114 SGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 173
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 12/189 (6%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T+GL D W I L + QG FG+++ GT+NG VAIK L+ PE
Sbjct: 5 TQGLAK-DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE----- 58
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L+H +V+ + ++ IV EY G + FL + + L
Sbjct: 59 --AFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQ 115
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
V A +A GMAYV R+ +HRDL++ N+L+ + K+ADFG+AR+ E +
Sbjct: 116 LVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA 175
Query: 297 TY--RWMAP 303
+ +W AP
Sbjct: 176 KFPIKWTAP 184
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 53
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 54 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 112
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 113 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 172
Query: 302 AP 303
AP
Sbjct: 173 AP 174
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 7 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 60 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 118
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 119 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 178
Query: 302 AP 303
AP
Sbjct: 179 AP 180
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 58
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 302 AP 303
AP
Sbjct: 178 AP 179
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 14 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 66
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 67 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 125
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 126 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 185
Query: 302 AP 303
AP
Sbjct: 186 AP 187
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 58
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 302 AP 303
AP
Sbjct: 178 AP 179
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 8 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 60
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 61 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 119
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 120 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 179
Query: 302 AP 303
AP
Sbjct: 180 AP 181
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 64
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 183
Query: 302 AP 303
AP
Sbjct: 184 AP 185
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 58
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 177
Query: 302 AP 303
AP
Sbjct: 178 AP 179
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPEND 169
MD +SP N+D+W ++ + M G +G++Y G + VA+K L+ +
Sbjct: 3 MDPSSP-----NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
E+ + +KHPN+V+ +G C + + I+TE+ G++ +L +
Sbjct: 58 VEE-------FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 110
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ V + + A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+
Sbjct: 111 QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL----- 165
Query: 290 GMTPETGT--------YRWMAP 303
MT +T T +W AP
Sbjct: 166 -MTGDTYTAHAGAKFPIKWTAP 186
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 16 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 68
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 69 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 127
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 128 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 187
Query: 302 AP 303
AP
Sbjct: 188 AP 189
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 12 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 64
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 65 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 183
Query: 302 AP 303
AP
Sbjct: 184 AP 185
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 15 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 67
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 68 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 126
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 127 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 186
Query: 302 AP 303
AP
Sbjct: 187 AP 188
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 88/182 (48%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
DEW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 11 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 63
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 64 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 122
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 123 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 182
Query: 302 AP 303
AP
Sbjct: 183 AP 184
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPEND 169
MD +SP N+D+W ++ + M G +G++Y G + VA+K L+ +
Sbjct: 3 MDPSSP-----NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
E+ + +KHPN+V+ +G C + + I+TE+ G++ +L +
Sbjct: 58 VEE-------FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 110
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ V + + A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL----- 165
Query: 290 GMTPETGT--------YRWMAP 303
MT +T T +W AP
Sbjct: 166 -MTGDTXTAHAGAKFPIKWTAP 186
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPEND 169
MD +SP N+D+W ++ + M G +G++Y G + VA+K L+ +
Sbjct: 3 MDPSSP-----NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
E+ + +KHPN+V+ +G C + + I+TE+ G++ +L +
Sbjct: 58 VEE-------FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 110
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ V + + A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL----- 165
Query: 290 GMTPETGT--------YRWMAP 303
MT +T T +W AP
Sbjct: 166 -MTGDTYTAHAGAKFPIKWTAP 186
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 28/202 (13%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPEND 169
MD +SP N+D+W ++ + M G +G++Y G + VA+K L+ +
Sbjct: 3 MDPSSP-----NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
E+ + +KHPN+V+ +G C + + I+TE+ G++ +L +
Sbjct: 58 VEE-------FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR 110
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ V + + A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL----- 165
Query: 290 GMTPETGT--------YRWMAP 303
MT +T T +W AP
Sbjct: 166 -MTGDTYTAHAGAKFPIKWTAP 186
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 13/182 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
+W ID +L G FG ++ G + N ++VAIK + E
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEA 54
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ L HP +V+ G C + C+VTE+ + G + +L + Q + + LDV
Sbjct: 55 EVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 113
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWM 301
GMAY+ +IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W
Sbjct: 114 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWA 172
Query: 302 AP 303
+P
Sbjct: 173 SP 174
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 116/267 (43%), Gaps = 23/267 (8%)
Query: 46 QTSNGGGSVAMSVDNSSVGSNESHTRI--LNHQGLRRRANDNYSVAHSVNRRGRVSHALS 103
+T+ G S+++ + G H +I L++ G +S + V H
Sbjct: 102 ETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQEL-----VDHYKK 156
Query: 104 -DDALARAL---MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EV 158
+D L + L S+ P + E D W I L + G FG+++ TYN +V
Sbjct: 157 GNDGLCQKLSVPCMSSKPQKPWEK-DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKV 215
Query: 159 AIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGG 218
A+K ++ + TL+H +V+ K ++ I+TE+ G
Sbjct: 216 AVKTMK-------PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKG 267
Query: 219 SVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIAD 278
S+ FL + PL + + +A GMA++ + IHRDL++ N+L+ + KIAD
Sbjct: 268 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD 327
Query: 279 FGVARIEVQTEGMTPETGTY--RWMAP 303
FG+AR+ E E + +W AP
Sbjct: 328 FGLARVIEDNEYTAREGAKFPIKWTAP 354
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 58
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ P +
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI 178
Query: 299 RWMAP 303
+W AP
Sbjct: 179 KWTAP 183
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 23/195 (11%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXX 176
+G N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 13 QGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE---- 68
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V +
Sbjct: 69 ---FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVV 125
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
+ A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T
Sbjct: 126 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTY 179
Query: 297 T--------YRWMAP 303
T +W AP
Sbjct: 180 TAHAGAKFPIKWTAP 194
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 11/185 (5%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 57
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ P +
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI 177
Query: 299 RWMAP 303
+W AP
Sbjct: 178 KWTAP 182
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXX 177
G N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----- 55
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V +
Sbjct: 56 --FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 238 VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT 297
+ A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYT 167
Query: 298 --------YRWMAP 303
+W AP
Sbjct: 168 AHAGAKFPIKWTAP 181
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 93/194 (47%), Gaps = 23/194 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXX 177
G N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----- 55
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V +
Sbjct: 56 --FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 238 VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT 297
+ A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYT 167
Query: 298 --------YRWMAP 303
+W AP
Sbjct: 168 AHAGAKFPIKWTAP 181
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 28/202 (13%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPEND 169
MD +SP N+D+W ++ + M G +G++Y G + VA+K L+ +
Sbjct: 3 MDPSSP-----NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME 57
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
E+ + +KHPN+V+ +G C + + I+ E+ G++ +L +
Sbjct: 58 VEE-------FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR 110
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ V + + A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+
Sbjct: 111 QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL----- 165
Query: 290 GMTPETGT--------YRWMAP 303
MT +T T +W AP
Sbjct: 166 -MTGDTYTAHAGAKFPIKWTAP 186
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 263
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 323
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHR+L + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 324 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHA 377
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 378 GAKFPIKWTAP 388
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 58
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHA 172
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 173 GAKFPIKWTAP 183
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 58
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 59 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 118
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 119 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHA 172
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 173 GAKFPIKWTAP 183
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN-GEEVAIKILERPENDPEKAXXXXXXXXXX 183
D W I + + G FG+++ G YN +VA+K L+
Sbjct: 6 DAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLK-------PGTMSVQAFLEE 58
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ TL+H +VR + I+TEY GS+ FL + V L + +
Sbjct: 59 ANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQ 118
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMAY+ R IHRDL++ N+L+ KIADFG+AR+ E E + +W
Sbjct: 119 IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT 178
Query: 302 AP 303
AP
Sbjct: 179 AP 180
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXXX 184
EW + L + + G FG+++ G YNG +VA+K L++ P+
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAEA 55
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ L+H +VR + ++ I+TEY + GS+ FL + + + A +
Sbjct: 56 NLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQI 114
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWMA 302
A GMA++ IHR+L++ N+L+ S KIADFG+AR+ E E + +W A
Sbjct: 115 AEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTA 174
Query: 303 P 303
P
Sbjct: 175 P 175
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 260
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 261 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 320
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHR+L + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 321 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHA 374
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 375 GAKFPIKWTAP 385
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 302
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 303 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 362
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHR+L + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 363 ATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHA 416
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 417 GAKFPIKWTAP 427
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
+W ID +L G FG ++ G + N ++VAIK + E
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEA 56
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ L HP +V+ G C + C+V E+ + G + +L + Q + + LDV
Sbjct: 57 EVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDV 115
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWM 301
GMAY+ +IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W
Sbjct: 116 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWA 174
Query: 302 AP 303
+P
Sbjct: 175 SP 176
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 60
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 61 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 120
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 121 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHA 174
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 175 GAKFPIKWTAP 185
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 56
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHA 170
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 171 GAKFPIKWTAP 181
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 56
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 57 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 116
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 117 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYTAHA 170
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 171 GAKFPIKWTAP 181
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
+ D+W ++ + M G FG++Y G + VA+K L+ + E+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 54
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTXTAHA 168
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 169 GAKFPIKWTAP 179
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 23/194 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXX 177
G N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----- 55
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ +KHPN+V+ +G C + + I+ E+ G++ +L + + V +
Sbjct: 56 --FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 238 VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT 297
+ A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYT 167
Query: 298 --------YRWMAP 303
+W AP
Sbjct: 168 AHAGAKFPIKWTAP 181
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 23/194 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXX 177
G N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 1 GSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE----- 55
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ +KHPN+V+ +G C + + I+ E+ G++ +L + + V +
Sbjct: 56 --FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL 113
Query: 238 VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT 297
+ A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 114 LYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTYT 167
Query: 298 --------YRWMAP 303
+W AP
Sbjct: 168 AHAGAKFPIKWTAP 181
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 46 QTSNGGGSVAMSVDNSSVGSNESHTRI--LNHQGLRRRANDNYSVAHSVNRRGRVSHALS 103
+T+ G S+++ + G H +I L++ G +S + V H
Sbjct: 96 ETTKGSYSLSVRDYDPRQGDTVKHYKIRTLDNGGFYISPRSTFSTLQEL-----VDHYKK 150
Query: 104 -DDALARAL---MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EV 158
+D L + L S+ P + E D W I L + G FG+++ TYN +V
Sbjct: 151 GNDGLCQKLSVPCMSSKPQKPWEK-DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKV 209
Query: 159 AIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGG 218
A+K ++ + TL+H +V+ K ++ I+TE+ G
Sbjct: 210 AVKTMK-------PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKG 261
Query: 219 SVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIAD 278
S+ FL + PL + + +A GMA++ + IHRDL++ N+L+ + KIAD
Sbjct: 262 SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD 321
Query: 279 FGVARI 284
FG+AR+
Sbjct: 322 FGLARV 327
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 10/180 (5%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYN-GEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
W I + + G FG+++ G YN +VA+K L+
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLK-------PGTMSVQAFLEEAN 59
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
+ TL+H +VR K I+TE+ GS+ FL + V L + + +A
Sbjct: 60 LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 119
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 303
GMAY+ R IHRDL++ N+L+ KIADFG+AR+ E E + +W AP
Sbjct: 120 EGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 179
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
D W I L + G FG+++ TYN +VA+K ++
Sbjct: 8 DAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMK-------PGSMSVEAFLAE 60
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ TL+H +V+ K ++ I+TE+ GS+ FL + PL + +
Sbjct: 61 ANVMKTLQHDKLVKLHAVVTKEPIY-IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 119
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ + IHRDL++ N+L+ + KIADFG+AR+ E E + +W
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT 179
Query: 302 AP 303
AP
Sbjct: 180 AP 181
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 19/167 (11%)
Query: 124 FDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKIL--ERPENDPEKAXXXXXXXX 181
EW I +L +G+ +G FG++Y G ++GE VAI+++ ER D KA
Sbjct: 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAY 83
Query: 182 XXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ- 240
+H N+V F+GAC P I+T KG ++ + R + L V +
Sbjct: 84 RQT------RHENVVLFMGACMSPPHLAIITSLCKGRTLYSVV-----RDAKIVLDVNKT 132
Query: 241 ---ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
A ++ +GM Y+H G++H+DLKS N+ + + + I DFG+ I
Sbjct: 133 RQIAQEIVKGMGYLHAKGILHKDLKSKNVF-YDNGKVVITDFGLFSI 178
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 11/184 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W ++ L +G+ +G FG+++ G + + + E P
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD---LKAKFLQEA 163
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L HPNIVR IG C + IV E +GG FL R + +K ++ D
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDA 222
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYR----- 299
A GM Y+ IHRDL + N L+ +KI+DFG++R E +G+ +G R
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE--ADGVXAASGGLRQVPVK 280
Query: 300 WMAP 303
W AP
Sbjct: 281 WTAP 284
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 11/184 (5%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
D+W ++ L +G+ +G FG+++ G + + + E P
Sbjct: 107 DKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARI- 165
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L HPNIVR IG C + IV E +GG FL R + +K ++ D
Sbjct: 166 --LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR-LRVKTLLQMVGDA 222
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYR----- 299
A GM Y+ IHRDL + N L+ +KI+DFG++R E +G+ +G R
Sbjct: 223 AAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREE--ADGVYAASGGLRQVPVK 280
Query: 300 WMAP 303
W AP
Sbjct: 281 WTAP 284
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
N+D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 57
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+ E+ G++ +L + + V + +
Sbjct: 58 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTXTAHA 171
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 172 GAKFPIKWTAP 182
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 86/182 (47%), Gaps = 11/182 (6%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXX 183
D W + L + + G G+++ G YNG +VA+K L++ P+
Sbjct: 6 DAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-------AFLAE 58
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+H +VR + ++ I+TEY + GS+ FL + + + A
Sbjct: 59 ANLMKQLQHQRLVRLYAVVTQEPIY-IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWM 301
+A GMA++ IHRDL++ N+L+ S KIADFG+AR+ E E + +W
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT 177
Query: 302 AP 303
AP
Sbjct: 178 AP 179
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 121 LENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXX 178
++ D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 21 FQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE------ 74
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAV 238
+ +KHPN+V+ +G C + IVTEY G++ +L + V + +
Sbjct: 75 -FLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLL 133
Query: 239 KQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRL------MTGDTYTA 187
Query: 298 -------YRWMAP 303
+W AP
Sbjct: 188 HAGAKFPIKWTAP 200
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
+ D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 54
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+TE+ G++ +L + + V + +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTFTAHA 168
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 169 GAKFPIKWTAP 179
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 128 TIDLRKLNMGDAFAQGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
ID +L G FG ++ G + N ++VAIK + E
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEAEV 55
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ L HP +V+ G C + C+V E+ + G + +L + Q + + LDV
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 114
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 303
GMAY+ +IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W +P
Sbjct: 115 GMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP 173
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXX 180
+ D+W ++ + M G +G++Y G + VA+K L+ + E+
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE-------F 54
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ +KHPN+V+ +G C + + I+ E+ G++ +L + + V + +
Sbjct: 55 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYM 114
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT--- 297
A ++ M Y+ + IHRDL + N L+ + +K+ADFG++R+ MT +T T
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRL------MTGDTXTAHA 168
Query: 298 -----YRWMAP 303
+W AP
Sbjct: 169 GAKFPIKWTAP 179
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 128 TIDLRKLNMGDAFAQGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
ID +L G FG ++ G + N ++VAIK + E
Sbjct: 3 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEAEV 55
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ L HP +V+ G C + C+V E+ + G + +L + Q + + LDV
Sbjct: 56 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 114
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 303
GMAY+ +IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W +P
Sbjct: 115 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP 173
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
Query: 128 TIDLRKLNMGDAFAQGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
ID +L G FG ++ G + N ++VAIK + E
Sbjct: 1 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEED-------FIEEAEV 53
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ L HP +V+ G C + C+V E+ + G + +L + Q + + LDV
Sbjct: 54 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 112
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 303
GMAY+ +IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W +P
Sbjct: 113 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP 171
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 128 TIDLRKLNMGDAFAQGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
ID +L G FG ++ G + N ++VAIK ++ +
Sbjct: 23 VIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIK-------EGSMSEDDFIEEAEV 75
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ L HP +V+ G C + C+V E+ + G + +L + Q + + LDV
Sbjct: 76 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCE 134
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 303
GMAY+ +IHRDL + N L+ ++ IK++DFG+ R V + T TGT +W +P
Sbjct: 135 GMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASP 193
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---------EEVAIKILERPENDPEKAXXXX 177
W + +L +G +GAFG++ G +VA+K+L+ + EK
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 80
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ--------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 81 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYN 138
Query: 229 -----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ K V A VARGM Y+ IHRDL + N+L+ D +KIADFG+AR
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 284 -------IEVQTEGMTPETGTYRWMAP 303
+ T G P +WMAP
Sbjct: 199 DIHHIDYYKKTTNGRLP----VKWMAP 221
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---------EEVAIKILERPENDPEKAXXXX 177
W + +L +G +GAFG++ G +VA+K+L+ + EK
Sbjct: 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 121
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ--------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 122 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 179
Query: 229 -----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ K V A VARGM Y+ IHRDL + N+L+ D +KIADFG+AR
Sbjct: 180 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
Query: 284 -------IEVQTEGMTPETGTYRWMAP 303
+ T G P +WMAP
Sbjct: 240 DIHHIDYYKKTTNGRLP----VKWMAP 262
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---------EEVAIKILERPENDPEKAXXXX 177
W + +L +G +GAFG++ G +VA+K+L+ + EK
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 80
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPL--- 234
+ KH NI+ +GAC + ++ EYA G++R++L R+ +
Sbjct: 81 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFN 138
Query: 235 -----------KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
K V A VARGM Y+ IHRDL + N+L+ D +KIADFG+AR
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 284 -------IEVQTEGMTPETGTYRWMAP 303
+ T G P +WMAP
Sbjct: 199 DIHHIDXXKKTTNGRLP----VKWMAP 221
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---------EEVAIKILERPENDPEKAXXXX 177
W + +L +G +GAFG++ G +VA+K+L+ + EK
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 80
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ--------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 81 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 138
Query: 229 -----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ K V A VARGM Y+ IHRDL + N+L+ D +KIADFG+AR
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 284 -------IEVQTEGMTPETGTYRWMAP 303
+ T G P +WMAP
Sbjct: 199 DIHHIDYYKKTTNGRLP----VKWMAP 221
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---------EEVAIKILERPENDPEKAXXXX 177
W + +L +G +GAFG++ G +VA+K+L+ + EK
Sbjct: 15 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 72
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ--------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 73 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 130
Query: 229 -----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ K V A VARGM Y+ IHRDL + N+L+ D +KIADFG+AR
Sbjct: 131 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
Query: 284 -------IEVQTEGMTPETGTYRWMAP 303
+ T G P +WMAP
Sbjct: 191 DIHHIDYYKKTTNGRLP----VKWMAP 213
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---------EEVAIKILERPENDPEKAXXXX 177
W + +L +G +GAFG++ G +VA+K+L+ + EK
Sbjct: 12 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 69
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ--------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 70 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 127
Query: 229 -----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ K V A VARGM Y+ IHRDL + N+L+ D +KIADFG+AR
Sbjct: 128 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
Query: 284 -------IEVQTEGMTPETGTYRWMAP 303
+ T G P +WMAP
Sbjct: 188 DIHHIDYYKKTTNGRLP----VKWMAP 210
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---------EEVAIKILERPENDPEKAXXXX 177
W + +L +G +GAFG++ G +VA+K+L+ + EK
Sbjct: 16 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 73
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ--------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 74 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYN 131
Query: 229 -----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ K V A VARGM Y+ IHRDL + N+L+ D +KIADFG+AR
Sbjct: 132 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
Query: 284 -------IEVQTEGMTPETGTYRWMAP 303
+ T G P +WMAP
Sbjct: 192 DIHHIDYYKKTTNGRLP----VKWMAP 214
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---------EEVAIKILERPENDPEKAXXXX 177
W + +L +G +GAFG++ G +VA+K+L+ + EK
Sbjct: 23 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 80
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ--------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 81 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 138
Query: 229 -----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ K V A VARGM Y+ IHRDL + N+L+ D +KIADFG+AR
Sbjct: 139 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
Query: 284 -------IEVQTEGMTPETGTYRWMAP 303
+ T G P +WMAP
Sbjct: 199 DIHHIDYYKKTTNGRLP----VKWMAP 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 139 AFAQGAFGKLYRGTYNGE------EVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
GAFG +Y+G + E VAIKIL E KA +A++ H
Sbjct: 45 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVEFMDEALI---MASMDH 99
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
P++VR +G C P + +VT+ G + +++ + ++ ++ +L + + +A+GM Y+
Sbjct: 100 PHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKD-NIGSQLLLNWCVQIAKGMMYLE 157
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ S +KI DFG+AR+
Sbjct: 158 ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 189
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---------EEVAIKILERPENDPEKAXXXX 177
W + +L +G +GAFG++ G +VA+K+L+ + EK
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--SDATEKDLSDL 65
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ--------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 66 ISEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYN 123
Query: 229 -----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ K V A VARGM Y+ IHRDL + N+L+ D +KIADFG+AR
Sbjct: 124 PSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
Query: 284 -------IEVQTEGMTPETGTYRWMAP 303
+ T G P +WMAP
Sbjct: 184 DIHHIDYYKKTTNGRLP----VKWMAP 206
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 139 AFAQGAFGKLYRGTYNGE------EVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
GAFG +Y+G + E VAIKIL E KA +A++ H
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILN--ETTGPKANVEFMDEALI---MASMDH 76
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
P++VR +G C P + +VT+ G + +++ + ++ ++ +L + + +A+GM Y+
Sbjct: 77 PHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKD-NIGSQLLLNWCVQIAKGMMYLE 134
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ S +KI DFG+AR+
Sbjct: 135 ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 166
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +GAFG++ G + VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 145 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 204 ARDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +GAFG++ G + VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSY 144
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 145 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 204 ARDINNIDXXKKTTNGRLP----VKWMAP 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +GAFG++ G + VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 145 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 204 ARDINNIDXXKKTTNGRLP----VKWMAP 228
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +GAFG++ G + VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 145 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 204 ARDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
W +++++L + +G FG + G Y G +VA+K ++ ND
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK---ND-----ATAQAFLAEASV 67
Query: 187 LATLKHPNIVRFIGAC--RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ L+H N+V+ +G K ++ IVTEY GS+ +L R + +K +LDV
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 126
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWMA 302
M Y+ +HRDL + N+L+ D K++DFG+ + T+ +TG +W A
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTA 182
Query: 303 P 303
P
Sbjct: 183 P 183
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +GAFG++ G + VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 145 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 204 ARDINNIDYYKNTTNGRLP----VKWMAP 228
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 113/272 (41%), Gaps = 30/272 (11%)
Query: 42 FSSLQTSNGGGSVAMSVDNSSVGSNESHTRILNHQGLRRRANDNYSVAHSVNRRGRVSHA 101
F +++N G + V S H RI+ H + Y N V H
Sbjct: 104 FLVRESTNYPGDYTLCV---SCEGKVEHYRIMYHASKLSIDEEVYFE----NLMQLVEHY 156
Query: 102 LSD-DALARALMDSNSPTEGLENFDE-----WTIDLRKLNMGDAFAQGAFGKLYRGTYNG 155
+D D L L+ + DE W +++++L + +G FG + G Y G
Sbjct: 157 TTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGDYRG 216
Query: 156 EEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGAC--RKPMVWCIVTE 213
+VA+K ++ ND + L+H N+V+ +G K ++ IVTE
Sbjct: 217 NKVAVKCIK---ND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY-IVTE 267
Query: 214 YAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS 273
Y GS+ +L R + +K +LDV M Y+ +HRDL + N+L+ D
Sbjct: 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNV 327
Query: 274 IKIADFGVAR--IEVQTEGMTPETGTYRWMAP 303
K++DFG+ + Q G P +W AP
Sbjct: 328 AKVSDFGLTKEASSTQDTGKLP----VKWTAP 355
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
W +++++L + +G FG + G Y G +VA+K ++ ND
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK---ND-----ATAQAFLAEASV 58
Query: 187 LATLKHPNIVRFIGAC--RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ L+H N+V+ +G K ++ IVTEY GS+ +L R + +K +LDV
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 117
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWMA 302
M Y+ +HRDL + N+L+ D K++DFG+ + T+ +TG +W A
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTA 173
Query: 303 P 303
P
Sbjct: 174 P 174
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 29/190 (15%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
R + + ++ +G FG+++RG + GEEVA+KI E L+
Sbjct: 4 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-------RSWFREAEIYQTVMLR 56
Query: 192 HPNIVRFIGACRK-----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ FI A K +W +V++Y + GS+ +L + +V ++ +K AL A
Sbjct: 57 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 112
Query: 247 GMAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTE--GMTP-- 293
G+A++H + + HRDLKS N+L+ + + IAD G+A R + T+ + P
Sbjct: 113 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 172
Query: 294 ETGTYRWMAP 303
GT R+MAP
Sbjct: 173 RVGTKRYMAP 182
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 29/190 (15%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
R + + ++ +G FG+++RG + GEEVA+KI E L+
Sbjct: 29 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-------RSWFREAEIYQTVMLR 81
Query: 192 HPNIVRFIGACRK-----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ FI A K +W +V++Y + GS+ +L + +V ++ +K AL A
Sbjct: 82 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 137
Query: 247 GMAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEG--MTP-- 293
G+A++H + + HRDLKS N+L+ + + IAD G+A R + T+ + P
Sbjct: 138 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 197
Query: 294 ETGTYRWMAP 303
GT R+MAP
Sbjct: 198 RVGTKRYMAP 207
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 29/190 (15%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
R + + ++ +G FG+++RG + GEEVA+KI E L+
Sbjct: 9 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-------RSWFREAEIYQTVMLR 61
Query: 192 HPNIVRFIGACRK-----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ FI A K +W +V++Y + GS+ +L + +V ++ +K AL A
Sbjct: 62 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 117
Query: 247 GMAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEG--MTP-- 293
G+A++H + + HRDLKS N+L+ + + IAD G+A R + T+ + P
Sbjct: 118 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 177
Query: 294 ETGTYRWMAP 303
GT R+MAP
Sbjct: 178 RVGTKRYMAP 187
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 29/190 (15%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
R + + ++ +G FG+++RG + GEEVA+KI E L+
Sbjct: 6 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-------RSWFREAEIYQTVMLR 58
Query: 192 HPNIVRFIGACRK-----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ FI A K +W +V++Y + GS+ +L + +V ++ +K AL A
Sbjct: 59 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 114
Query: 247 GMAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTE--GMTP-- 293
G+A++H + + HRDLKS N+L+ + + IAD G+A R + T+ + P
Sbjct: 115 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 174
Query: 294 ETGTYRWMAP 303
GT R+MAP
Sbjct: 175 RVGTKRYMAP 184
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 17/181 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
W +++++L + +G FG + G Y G +VA+K ++ ND
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK---ND-----ATAQAFLAEASV 52
Query: 187 LATLKHPNIVRFIGAC--RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ L+H N+V+ +G K ++ IVTEY GS+ +L R + +K +LDV
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLY-IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDV 111
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWMA 302
M Y+ +HRDL + N+L+ D K++DFG+ + T+ +TG +W A
Sbjct: 112 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----DTGKLPVKWTA 167
Query: 303 P 303
P
Sbjct: 168 P 168
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 29/190 (15%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
R + + ++ +G FG+++RG + GEEVA+KI E L+
Sbjct: 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-------RSWFREAEIYQTVMLR 55
Query: 192 HPNIVRFIGACRK-----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ FI A K +W +V++Y + GS+ +L + +V ++ +K AL A
Sbjct: 56 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 111
Query: 247 GMAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEG--MTP-- 293
G+A++H + + HRDLKS N+L+ + + IAD G+A R + T+ + P
Sbjct: 112 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 171
Query: 294 ETGTYRWMAP 303
GT R+MAP
Sbjct: 172 RVGTKRYMAP 181
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
R++ + + +G +G+++RG ++GE VA+KI + L+
Sbjct: 8 RQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQ-------SWFRETEIYNTVLLR 60
Query: 192 HPNIVRFIGA-----CRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ FI + +W ++T Y + GS+ FL Q +++ LA++ A+ A
Sbjct: 61 HDNILGFIASDMTSRNSSTQLW-LITHYHEHGSLYDFL---QRQTLEPHLALRLAVSAAC 116
Query: 247 GMAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-----GMTP 293
G+A++H + + HRD KS N+L+ S+ IAD G+A + Q G P
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 294 ETGTYRWMAP 303
GT R+MAP
Sbjct: 177 RVGTKRYMAP 186
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 29/190 (15%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
R + + ++ +G FG+++RG + GEEVA+KI E L+
Sbjct: 42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREE-------RSWFREAEIYQTVMLR 94
Query: 192 HPNIVRFIGACRK-----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ FI A K +W +V++Y + GS+ +L + +V ++ +K AL A
Sbjct: 95 HENILGFIAADNKDNGTWTQLW-LVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTAS 150
Query: 247 GMAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTE--GMTP-- 293
G+A++H + + HRDLKS N+L+ + + IAD G+A R + T+ + P
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNH 210
Query: 294 ETGTYRWMAP 303
GT R+MAP
Sbjct: 211 RVGTKRYMAP 220
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +GAFG++ G + VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + ++IADFG+
Sbjct: 145 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGL 203
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 204 ARDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +G FG++ G + VA+K+L+ ++ EK
Sbjct: 75 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 132
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 133 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 190
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 191 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 249
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 250 ARDINNIDYYKKTTNGRLP----VKWMAP 274
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +G FG++ G + VA+K+L+ ++ EK
Sbjct: 21 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 78
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 79 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 136
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 137 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 195
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 196 ARDINNIDYYKKTTNGRLP----VKWMAP 220
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +G FG++ G + VA+K+L+ ++ EK
Sbjct: 18 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 75
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 76 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 133
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 134 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 192
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 193 ARDINNIDYYKKTTNGRLP----VKWMAP 217
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 94 RRGRVSHALS---DDALARALMDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYR 150
++G SH +S D A + + ++ T + + ++ I ++ +G +G FG +++
Sbjct: 351 KQGVRSHTVSVSETDDYAEIIDEEDTYT--MPSTRDYEIQRERIELGRCIGEGQFGDVHQ 408
Query: 151 GTYNGEE-----VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKP 205
G Y E VAIK + +D + + HP+IV+ IG +
Sbjct: 409 GIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALT-----MRQFDHPHIVKLIGVITEN 463
Query: 206 MVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA--VKQALDVARGMAYVHRLGLIHRDLKS 263
VW I+ E G +R FL Q R L LA + A ++ +AY+ +HRD+ +
Sbjct: 464 PVW-IIMELCTLGELRSFL---QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAA 519
Query: 264 DNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 303
N+L+ S+ +K+ DFG++R + G +WMAP
Sbjct: 520 RNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 140 FAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
+G FGK+ Y+ GE+VA+K L+ PE L L H
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-----PESGGNHIADLKKEIEILRNLYHE 83
Query: 194 NIVRFIGACRKPMVWCI--VTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
NIV++ G C + I + E+ GS++++L K +N+ + LK +K A+ + +GM Y+
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYL 142
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPE---TGTYRWMAP 303
+HRDL + N+L+ S+ +KI DFG+ + IE E T + W AP
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 198
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +G FG++ G + VA+K+L+ ++ EK
Sbjct: 16 KWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 73
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 74 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 131
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 132 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGL 190
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 191 ARDINNIDYYKKTTNGRLP----VKWMAP 215
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +GAFG++ G + VA+K+L+ ++ E+
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEEDLSD 86
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ EYA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 145 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 204 ARDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 66
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ HP+IV+ IG + VW I+ E G +R FL R+ S+ L +
Sbjct: 67 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKY-SLDLASLILY 119
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ +AY+ +HRD+ + N+L+ S+ +K+ DFG++R + G
Sbjct: 120 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 179
Query: 299 RWMAP 303
+WMAP
Sbjct: 180 KWMAP 184
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 68
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ HP+IV+ IG + VW I+ E G +R FL R+ S+ L +
Sbjct: 69 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKY-SLDLASLILY 121
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ +AY+ +HRD+ + N+L+ S+ +K+ DFG++R + G
Sbjct: 122 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 299 RWMAP 303
+WMAP
Sbjct: 182 KWMAP 186
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 65
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ HP+IV+ IG + VW I+ E G +R FL R+ S+ L +
Sbjct: 66 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKY-SLDLASLILY 118
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ +AY+ +HRD+ + N+L+ S+ +K+ DFG++R + G
Sbjct: 119 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 178
Query: 299 RWMAP 303
+WMAP
Sbjct: 179 KWMAP 183
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ HP+IV+ IG + VW I+ E G +R FL R+ S+ L +
Sbjct: 92 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKY-SLDLASLILY 144
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ +AY+ +HRD+ + N+L+ S+ +K+ DFG++R + G
Sbjct: 145 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 204
Query: 299 RWMAP 303
+WMAP
Sbjct: 205 KWMAP 209
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 18/176 (10%)
Query: 140 FAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
+G FGK+ Y+ GE+VA+K L+ PE L L H
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-----PESGGNHIADLKKEIEILRNLYHE 71
Query: 194 NIVRFIGACRKP--MVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
NIV++ G C + ++ E+ GS++++L K +N+ + LK +K A+ + +GM Y+
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYL 130
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPE---TGTYRWMAP 303
+HRDL + N+L+ S+ +KI DFG+ + IE E T + W AP
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAP 186
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ HP+IV+ IG + VW I+ E G +R FL R+ S+ L +
Sbjct: 64 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKF-SLDLASLILY 116
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ +AY+ +HRD+ + N+L+ S+ +K+ DFG++R + G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI 176
Query: 299 RWMAP 303
+WMAP
Sbjct: 177 KWMAP 181
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 109 RALMDSNS---PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIK 161
R +D ++ PT+ + F D I + K+ F + G+L + VAIK
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 162 ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVR 221
L+ + ++ + HPNI+R G K IVTEY + GS+
Sbjct: 80 TLKVGYTEKQR-----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 222 QFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
FL K + ++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG+
Sbjct: 135 SFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 282 ARI-EVQTEGMTPETG---TYRWMAP 303
AR+ E E G RW +P
Sbjct: 194 ARVLEDDPEAAYTTRGGKIPIRWTSP 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 29/190 (15%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
R++ + + +G +G+++RG++ GE VA+KI + EK+ L+
Sbjct: 37 RQITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD---EKSWFRETELYNT----VMLR 89
Query: 192 HPNIVRFIGA-----CRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ FI + +W ++T Y + GS+ +L Q ++ ++ L +A
Sbjct: 90 HENILGFIASDMTSRHSSTQLW-LITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIAS 145
Query: 247 GMAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-----GMTP 293
G+A++H + + HRDLKS N+L+ + IAD G+A + Q+ G P
Sbjct: 146 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 205
Query: 294 ETGTYRWMAP 303
GT R+MAP
Sbjct: 206 RVGTKRYMAP 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ HP+IV+ IG + VW I+ E G +R FL R+ S+ L +
Sbjct: 64 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKY-SLDLASLILY 116
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ +AY+ +HRD+ + N+L+ S+ +K+ DFG++R + G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 299 RWMAP 303
+WMAP
Sbjct: 177 KWMAP 181
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ HP+IV+ IG + VW I+ E G +R FL R+ S+ L +
Sbjct: 64 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKY-SLDLASLILY 116
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ +AY+ +HRD+ + N+L+ S+ +K+ DFG++R + G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 299 RWMAP 303
+WMAP
Sbjct: 177 KWMAP 181
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXXXXXLATL 190
++ + G FG + G + G+ +VA+K+++ + + L
Sbjct: 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIK-------EGSMSEDEFFQEAQTMMKL 60
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAY 250
HP +V+F G C K IVTEY G + +L P +L ++ DV GMA+
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-LEMCYDVCEGMAF 119
Query: 251 VHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 303
+ IHRDL + N L+ D +K++DFG+ R V + GT +W AP
Sbjct: 120 LESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRY-VLDDQYVSSVGTKFPVKWSAP 174
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ HP+IV+ IG + VW I+ E G +R FL R+ S+ L +
Sbjct: 61 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKY-SLDLASLILY 113
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ +AY+ +HRD+ + N+L+ S+ +K+ DFG++R + G
Sbjct: 114 AYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 173
Query: 299 RWMAP 303
+WMAP
Sbjct: 174 KWMAP 178
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 31/204 (15%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 67
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ H N+V +GAC KP ++TE+ K G++ +L ++N VP K+A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 238 --------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ + VA+GM ++ IHRDL + N+L+ +KI DFG+AR
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 284 IEVQTEGMTPETGTYR----WMAP 303
++ + G R WMAP
Sbjct: 188 -DIXKDPDXVRKGDARLPLKWMAP 210
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 109 RALMDSNS---PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIK 161
R +D ++ PT+ + F D I + K+ F + G+L + VAIK
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 162 ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVR 221
L+ + ++ + HPNI+R G K IVTEY + GS+
Sbjct: 80 TLKVGYTEKQR-----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 222 QFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
FL K + ++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG+
Sbjct: 135 SFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGL 193
Query: 282 ARI-EVQTEGMTPETG---TYRWMAP 303
+R+ E E G RW +P
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSP 219
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +GAFG++ G + VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ YA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSY 144
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 145 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 204 ARDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G EVAIKI+++ + +P + L HPNIV+
Sbjct: 29 KLARHILTGREVAIKIIDKTQLNP----TSLQKLFREVRIMKILNHPNIVKLFEVIETEK 84
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
++ EYA GG V +L + + K A + + + Y H+ ++HRDLK++NL
Sbjct: 85 TLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 142
Query: 267 LIFSDKSIKIADFGVA 282
L+ +D +IKIADFG +
Sbjct: 143 LLDADMNIKIADFGFS 158
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 37/207 (17%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 67
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP----MVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
+ H N+V +GAC KP MV +TE+ K G++ +L ++N VP
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV---ITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 235 KLA--------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
K+A + + VA+GM ++ IHRDL + N+L+ +KI DFG
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 281 VARIEVQTEGMTPETGTYR----WMAP 303
+AR ++ + G R WMAP
Sbjct: 185 LAR-DIYKDPDYVRKGDARLPLKWMAP 210
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 7/170 (4%)
Query: 136 MGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
+GD G FGK+ G + G +VA+KIL R + ++ L +HP
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI---RSLDVVGKIRREIQNLKLFRHP 76
Query: 194 NIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHR 253
+I++ P +V EY GG + ++ K N + K + + + G+ Y HR
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHR 134
Query: 254 LGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +N+L+ + + KIADFG++ + E + G+ + AP
Sbjct: 135 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAP 184
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 37/207 (17%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 67
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP----MVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
+ H N+V +GAC KP MV +TE+ K G++ +L ++N VP
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV---ITEFCKFGNLSTYLRSKRNEFVPY 124
Query: 235 KLA--------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
K+A + + VA+GM ++ IHRDL + N+L+ +KI DFG
Sbjct: 125 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 184
Query: 281 VARIEVQTEGMTPETGTYR----WMAP 303
+AR ++ + G R WMAP
Sbjct: 185 LAR-DIYKDPDYVRKGDARLPLKWMAP 210
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G EVAIKI+++ + +P + L HPNIV+
Sbjct: 32 KLARHILTGREVAIKIIDKTQLNP----TSLQKLFREVRIMKILNHPNIVKLFEVIETEK 87
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
++ EYA GG V +L + + K A + + + Y H+ ++HRDLK++NL
Sbjct: 88 TLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENL 145
Query: 267 LIFSDKSIKIADFGVA 282
L+ +D +IKIADFG +
Sbjct: 146 LLDADMNIKIADFGFS 161
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 109 RALMDSNS---PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIK 161
R +D ++ PT+ + F D I + K+ F + G+L + VAIK
Sbjct: 20 RTFVDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 162 ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVR 221
L+ + ++ + HPNI+R G K IVTEY + GS+
Sbjct: 80 TLKVGYTEKQR-----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 222 QFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
FL K + ++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG+
Sbjct: 135 SFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 282 ARI-EVQTEGMTPETG---TYRWMAP 303
+R+ E E G RW +P
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSP 219
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 109 RALMDSNS---PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIK 161
R +D ++ PT+ + F D I + K+ F + G+L + VAIK
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 162 ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVR 221
L+ + ++ + HPNI+R G K IVTEY + GS+
Sbjct: 80 TLKVGYTEKQR-----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 222 QFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
FL K + ++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG+
Sbjct: 135 SFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 282 ARI-EVQTEGMTPETG---TYRWMAP 303
+R+ E E G RW +P
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSP 219
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 11/192 (5%)
Query: 115 NSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKA 173
N+P+ + W ID + L G FG + G + G+ +VAIK+++ +
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-------EG 59
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP 233
+ L H +V+ G C K I+TEY G + +L + ++R
Sbjct: 60 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT 119
Query: 234 LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP 293
+L ++ DV M Y+ +HRDL + N L+ +K++DFG++R + E +
Sbjct: 120 QQL-LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS 178
Query: 294 ETGTY--RWMAP 303
+ RW P
Sbjct: 179 VGSKFPVRWSPP 190
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 13/193 (6%)
Query: 115 NSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKA 173
N+P+ + W ID + L G FG + G + G+ +VAIK+++ +
Sbjct: 7 NAPSTAGLGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-------EG 59
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP 233
+ L H +V+ G C K I+TEY G + +L + ++R
Sbjct: 60 SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQT 119
Query: 234 LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP 293
+L ++ DV M Y+ +HRDL + N L+ +K++DFG++R + E T
Sbjct: 120 QQL-LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTS 177
Query: 294 ETGT---YRWMAP 303
G+ RW P
Sbjct: 178 SVGSKFPVRWSPP 190
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 93/209 (44%), Gaps = 40/209 (19%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE---------VAIKILERPENDPEKAXXX 176
+W KL +G +GAFG++ G + VA+K+L+ ++ EK
Sbjct: 29 KWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DDATEKDLSD 86
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------- 228
+ KH NI+ +GAC + ++ YA G++R++L R+
Sbjct: 87 LVSEMEMMKMIG--KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSY 144
Query: 229 --NRSVP-----LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
NR VP K V +ARGM Y+ IHRDL + N+L+ + +KIADFG+
Sbjct: 145 DINR-VPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL 203
Query: 282 AR-------IEVQTEGMTPETGTYRWMAP 303
AR + T G P +WMAP
Sbjct: 204 ARDINNIDYYKKTTNGRLP----VKWMAP 228
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 67/136 (49%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G EVA+KI+++ + +P + L HPNIV+
Sbjct: 32 KLARHVLTGREVAVKIIDKTQLNP----TSLQKLFREVRIMKILNHPNIVKLFEVIETEK 87
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
+V EYA GG V +L + + K A + + + Y H+ ++HRDLK++NL
Sbjct: 88 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENL 145
Query: 267 LIFSDKSIKIADFGVA 282
L+ D +IKIADFG +
Sbjct: 146 LLDGDMNIKIADFGFS 161
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 443
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA--V 238
+ HP+IV+ IG + VW I+ E G +R FL Q R L LA +
Sbjct: 444 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFL---QVRKFSLDLASLI 494
Query: 239 KQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY 298
A ++ +AY+ +HRD+ + N+L+ + +K+ DFG++R + G
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKL 554
Query: 299 --RWMAP 303
+WMAP
Sbjct: 555 PIKWMAP 561
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 117 PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEK 172
PT+ + F D I + K+ F + G+L + VAIK L+ + ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 173 AXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSV 232
+ HPNI+R G K IVTEY + GS+ FL K +
Sbjct: 91 -----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 233 PLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGM 291
++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG++R+ E E
Sbjct: 146 VIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 292 TPETG---TYRWMAP 303
G RW +P
Sbjct: 205 YTTRGGKIPIRWTSP 219
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 117 PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEK 172
PT+ + F D I + K+ F + G+L + VAIK L+ + ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 173 AXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSV 232
+ HPNI+R G K IVTEY + GS+ FL K +
Sbjct: 91 -----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 233 PLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGM 291
++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG++R+ E E
Sbjct: 146 VIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 292 TPETG---TYRWMAP 303
G RW +P
Sbjct: 205 YTTRGGKIPIRWTSP 219
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 109 RALMDSNS---PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIK 161
R +D ++ PT+ + F D I + K+ F + G+L + VAIK
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 162 ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVR 221
L+ + ++ + HPNI+R G K IVTEY + GS+
Sbjct: 80 TLKVGYTEKQR-----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 222 QFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
FL K + ++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG+
Sbjct: 135 SFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Query: 282 ARI-EVQTEGMTPETG---TYRWMAP 303
R+ E E G RW +P
Sbjct: 194 GRVLEDDPEAAYTTRGGKIPIRWTSP 219
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
R + + + +G +G+++RG++ GE VA+KI + EK+ L+
Sbjct: 8 RDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD---EKSWFRETELYNT----VMLR 60
Query: 192 HPNIVRFIGA-----CRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ FI + +W ++T Y + GS+ +L Q ++ ++ L +A
Sbjct: 61 HENILGFIASDMTSRHSSTQLW-LITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIAS 116
Query: 247 GMAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-----GMTP 293
G+A++H + + HRDLKS N+L+ + IAD G+A + Q+ G P
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 294 ETGTYRWMAP 303
GT R+MAP
Sbjct: 177 RVGTKRYMAP 186
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 117 PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEK 172
PT+ + F D I + K+ F + G+L + VAIK L+ + ++
Sbjct: 29 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 88
Query: 173 AXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSV 232
+ HPNI+R G K IVTEY + GS+ FL K +
Sbjct: 89 -----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 143
Query: 233 PLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGM 291
++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG++R+ E E
Sbjct: 144 VIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 202
Query: 292 TPETG---TYRWMAP 303
G RW +P
Sbjct: 203 YTTRGGKIPIRWTSP 217
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +LN+G +GAFG++ T VA+K+L+ E
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH----RA 76
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 238 VKQAL----------DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQ 287
K L VA+GM ++ IHRDL + N+L+ +KI DFG+AR ++
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIY 195
Query: 288 TEGMTPETGTYR----WMAP 303
+ G R WMAP
Sbjct: 196 KDPDYVRKGDARLPLKWMAP 215
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 31/204 (15%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 67
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K+A
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 127
Query: 238 --------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ + VA+GM ++ IHRDL + N+L+ +KI DFG+AR
Sbjct: 128 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
Query: 284 IEVQTEGMTPETGTYR----WMAP 303
++ + G R WMAP
Sbjct: 188 -DIXKDPDXVRKGDARLPLKWMAP 210
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 34/187 (18%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGT---YNGE----EVAIKILERPENDPEKAXXXXX 178
+W + L +G +G FGK+ + T G VA+K+L+ + E
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-----LR 71
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN--------- 229
L + HP++++ GAC + ++ EYAK GS+R FL + +
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 230 -------------RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKI 276
R++ + + A +++GM Y+ + L+HRDL + N+L+ + +KI
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKI 191
Query: 277 ADFGVAR 283
+DFG++R
Sbjct: 192 SDFGLSR 198
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 30/203 (14%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +LN+G +GAFG++ T VA+K+L+ E
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 77
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTP 137
Query: 238 -------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+ + VA+GM ++ IHRDL + N+L+ +KI DFG+AR
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR- 196
Query: 285 EVQTEGMTPETGTYR----WMAP 303
++ + G R WMAP
Sbjct: 197 DIXKDPDXVRKGDARLPLKWMAP 219
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +LN+G +GAFG++ T VA+K+L+ E
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH----RA 76
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDL 136
Query: 238 VKQAL----------DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQ 287
K L VA+GM ++ IHRDL + N+L+ +KI DFG+AR ++
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-DIY 195
Query: 288 TEGMTPETGTYR----WMAP 303
+ G R WMAP
Sbjct: 196 KDPDYVRKGDARLPLKWMAP 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPENDPEKAXXXXXXX 180
++ I ++ +G +G FG +++G Y E VAIK + +D +
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 181 XXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ HP+IV+ IG + VW I+ E G +R FL R+ S+ L +
Sbjct: 64 T-----MRQFDHPHIVKLIGVITENPVW-IIMELCTLGELRSFLQVRKF-SLDLASLILY 116
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY-- 298
A ++ +AY+ +HRD+ + N+L+ + +K+ DFG++R + G
Sbjct: 117 AYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 299 RWMAP 303
+WMAP
Sbjct: 177 KWMAP 181
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 143 GAFGKLYRGTYNGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GAFGK+Y+ V A K+++ K+ LA+ HPNIV+ +
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDT------KSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTK--RQNRSVPLKLAVKQALDVARGMAYVHRLGLIH 258
A I+ E+ GG+V + + R +++ KQ LD + Y+H +IH
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIH 158
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 303
RDLK+ N+L D IK+ADFGV+ +T + GT WMAP
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAP 204
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 37/207 (17%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 76
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP----MVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
+ H N+V +GAC KP MV + E+ K G++ +L ++N VP
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV---IVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 235 KLA--------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
K+A + + VA+GM ++ IHRDL + N+L+ +KI DFG
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 281 VARIEVQTEGMTPETGTYR----WMAP 303
+AR ++ + G R WMAP
Sbjct: 194 LAR-DIXKDPDXVRKGDARLPLKWMAP 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 29/189 (15%)
Query: 133 KLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ + + +G +G+++RG++ GE VA+KI + EK+ L+H
Sbjct: 9 QITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD---EKSWFRETELYNT----VMLRH 61
Query: 193 PNIVRFIGA-----CRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
NI+ FI + +W ++T Y + GS+ +L Q ++ ++ L +A G
Sbjct: 62 ENILGFIASDMTSRHSSTQLW-LITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIASG 117
Query: 248 MAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-----GMTPE 294
+A++H + + HRDLKS N+L+ + IAD G+A + Q+ G P
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 295 TGTYRWMAP 303
GT R+MAP
Sbjct: 178 VGTKRYMAP 186
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 136 MGDAFAQGAFGKLYRGTYN--GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
+GD G FGK+ G + G +VA+KIL R + ++ L +HP
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI---RSLDVVGKIKREIQNLKLFRHP 71
Query: 194 NIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR-QNRSVPLKLAVKQALDVARGMAYVH 252
+I++ P + +V EY GG + ++ K + + + +Q L + Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS---AVDYCH 128
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
R ++HRDLK +N+L+ + + KIADFG++ + E + G+ + AP
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 34/187 (18%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTY-------NGEEVAIKILERPENDPEKAXXXXX 178
+W + L +G +G FGK+ + T VA+K+L+ + E
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-----LR 71
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN--------- 229
L + HP++++ GAC + ++ EYAK GS+R FL + +
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 230 -------------RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKI 276
R++ + + A +++GM Y+ + L+HRDL + N+L+ + +KI
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 277 ADFGVAR 283
+DFG++R
Sbjct: 192 SDFGLSR 198
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 34/187 (18%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGT---YNGE----EVAIKILERPENDPEKAXXXXX 178
+W + L +G +G FGK+ + T G VA+K+L+ + E
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE-----LR 71
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN--------- 229
L + HP++++ GAC + ++ EYAK GS+R FL + +
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 230 -------------RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKI 276
R++ + + A +++GM Y+ + L+HRDL + N+L+ + +KI
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKI 191
Query: 277 ADFGVAR 283
+DFG++R
Sbjct: 192 SDFGLSR 198
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 37/207 (17%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 76
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP----MVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
+ H N+V +GAC KP MV + E+ K G++ +L ++N VP
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV---IVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 235 KLA--------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
K+A + + VA+GM ++ IHRDL + N+L+ +KI DFG
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 281 VARIEVQTEGMTPETGTYR----WMAP 303
+AR ++ + G R WMAP
Sbjct: 194 LAR-DIYKDPDXVRKGDARLPLKWMAP 219
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 31/204 (15%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 113
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K+A
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 173
Query: 238 --------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ + VA+GM ++ IHRDL + N+L+ +KI DFG+AR
Sbjct: 174 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 233
Query: 284 IEVQTEGMTPETGTYR----WMAP 303
++ + G R WMAP
Sbjct: 234 -DIYKDPDYVRKGDARLPLKWMAP 256
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 136 MGDAFAQGAFGKLYRGTYN--GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
+GD G FGK+ G + G +VA+KIL R + ++ L +HP
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI---RSLDVVGKIKREIQNLKLFRHP 71
Query: 194 NIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR-QNRSVPLKLAVKQALDVARGMAYVH 252
+I++ P + +V EY GG + ++ K + + + +Q L + Y H
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILS---AVDYCH 128
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
R ++HRDLK +N+L+ + + KIADFG++ + E + G+ + AP
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-----EEVAIKILERPENDPE 171
P E + F + ID+ + + + G FG++ RG VAIK L+ + +
Sbjct: 2 PNEAVREFAK-EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQ 60
Query: 172 KAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS 231
+ + +HPNI+R G M I+TE+ + G++ FL +
Sbjct: 61 R-----REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF 115
Query: 232 VPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGM 291
++L V +A GM Y+ + +HRDL + N+L+ S+ K++DFG++R +
Sbjct: 116 TVIQL-VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 174
Query: 292 TPETGTY------RWMAP 303
ET + RW AP
Sbjct: 175 PTETSSLGGKIPIRWTAP 192
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 10/189 (5%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXX 178
E + D I + K+ F + G+L + VAIK L+ + ++
Sbjct: 25 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-----R 79
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAV 238
+ HPNI+R G K IVTEY + GS+ FL K + ++L V
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-V 138
Query: 239 KQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPETG- 296
+A GM Y+ +G +HRDL + N+LI S+ K++DFG++R+ E E G
Sbjct: 139 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 198
Query: 297 --TYRWMAP 303
RW +P
Sbjct: 199 KIPIRWTSP 207
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 85/189 (44%), Gaps = 10/189 (5%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXX 178
E + D I + K+ F + G+L + VAIK L+ + ++
Sbjct: 8 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-----R 62
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAV 238
+ HPNI+R G K IVTEY + GS+ FL K + ++L V
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQL-V 121
Query: 239 KQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPETG- 296
+A GM Y+ +G +HRDL + N+LI S+ K++DFG++R+ E E G
Sbjct: 122 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 297 --TYRWMAP 303
RW +P
Sbjct: 182 KIPIRWTSP 190
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 89/207 (42%), Gaps = 37/207 (17%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 76
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP----MVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
+ H N+V +GAC KP MV + E+ K G++ +L ++N VP
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMV---IVEFCKFGNLSTYLRSKRNEFVPY 133
Query: 235 KLA--------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
K+A + + VA+GM ++ IHRDL + N+L+ +KI DFG
Sbjct: 134 KVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 281 VARIEVQTEGMTPETGTYR----WMAP 303
+AR ++ + G R WMAP
Sbjct: 194 LAR-DIYKDPDYVRKGDARLPLKWMAP 219
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 1 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 56
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 57 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 113
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 114 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-- 171
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 172 --VKWYAP 177
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 118 TEGLEN-FDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-VAIKILERPENDPEKAXX 175
+E L+N ++ ID L +G +G FG + G E+ ++K+ + +
Sbjct: 19 SEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR 78
Query: 176 XXXXXXXXXXXLATLKHPNIVRFIGAC--------RKPMVWCIVTEYAKGGSVRQFLTKR 227
+ HPN++R +G C KPMV + + K G + +L
Sbjct: 79 EIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMV---ILPFMKYGDLHTYLLYS 135
Query: 228 Q----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ + +PL+ +K +D+A GM Y+ +HRDL + N ++ D ++ +ADFG+++
Sbjct: 136 RLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSK 195
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 365 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 420
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 421 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 477
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 478 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-- 535
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 536 --VKWYAP 541
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 140 FAQGAFGKLYRGTYN---GEE--VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
+G FG++Y G Y GE+ VA+K ++ + + L HP+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK-----DCTLDNKEKFMSEAVIMKNLDHPH 86
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
IV+ IG + W I+ E G + +L + +N S+ + V +L + + MAY+ +
Sbjct: 87 IVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLESI 144
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 303
+HRD+ N+L+ S + +K+ DFG++R ++ E + T +WM+P
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSP 195
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 140 FAQGAFGKLYRGTYN---GEE--VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
+G FG++Y G Y GE+ VA+K ++ + + L HP+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK-----DCTLDNKEKFMSEAVIMKNLDHPH 74
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
IV+ IG + W I+ E G + +L + +N S+ + V +L + + MAY+ +
Sbjct: 75 IVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLESI 132
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 303
+HRD+ N+L+ S + +K+ DFG++R ++ E + T +WM+P
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSP 183
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 366 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 421
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 422 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 478
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 479 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-- 536
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 537 --VKWYAP 542
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G+EVA+KI+++ + + + L HPNIV+
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
+V EYA GG V +L + + K A + + + Y H+ ++HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 267 LIFSDKSIKIADFGVA 282
L+ +D +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G+EVA+KI+++ + + + L HPNIV+
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
+V EYA GG V +L + + K A + + + Y H+ ++HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 267 LIFSDKSIKIADFGVA 282
L+ +D +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 143 GAFGKLYRGTYNGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GAFGK+Y+ V A K+++ K+ LA+ HPNIV+ +
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDT------KSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTK--RQNRSVPLKLAVKQALDVARGMAYVHRLGLIH 258
A I+ E+ GG+V + + R +++ KQ LD + Y+H +IH
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIH 158
Query: 259 RDLKSDNLLIFSDKSIKIADFGV-ARIEVQTEGMTPETGTYRWMAP 303
RDLK+ N+L D IK+ADFGV A+ + GT WMAP
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAP 204
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 3 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 58
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 59 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 115
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 116 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-- 173
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 174 --VKWYAP 179
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 21 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 76
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 77 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 133
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 134 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-- 191
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 192 --VKWYAP 197
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 62
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 63 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 119
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP-- 177
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 178 --VKWYAP 183
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G+EVA+KI+++ + + + L HPNIV+
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
+V EYA GG V +L + + K A + + + Y H+ ++HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 267 LIFSDKSIKIADFGVA 282
L+ +D +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
Query: 140 FAQGAFGKLYRGTYN---GEE--VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
+G FG++Y G Y GE+ VA+K ++ + + L HP+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKK-----DCTLDNKEKFMSEAVIMKNLDHPH 70
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
IV+ IG + W I+ E G + +L + +N S+ + V +L + + MAY+ +
Sbjct: 71 IVKLIGIIEEEPTW-IIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLESI 128
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 303
+HRD+ N+L+ S + +K+ DFG++R ++ E + T +WM+P
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKWMSP 179
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 68
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 69 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 125
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 126 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-- 183
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 184 --VKWYAP 189
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 7 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 62
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 63 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 119
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-- 177
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 178 --VKWYAP 183
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 143 GAFGKLYRGTYNGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GAFGK+Y+ V A K+++ K+ LA+ HPNIV+ +
Sbjct: 48 GAFGKVYKAQNKETSVLAAAKVIDT------KSEEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTK--RQNRSVPLKLAVKQALDVARGMAYVHRLGLIH 258
A I+ E+ GG+V + + R +++ KQ LD + Y+H +IH
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIH 158
Query: 259 RDLKSDNLLIFSDKSIKIADFGV-ARIEVQTEGMTPETGTYRWMAP 303
RDLK+ N+L D IK+ADFGV A+ + GT WMAP
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAP 204
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 143 GAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GA+G +Y R ++G VA+K + P N E L +HPN+VR +
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 201 ACR-----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
C + + +V E+ +R +L K +P + RG+ ++H
Sbjct: 74 VCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +N+L+ S ++K+ADFG+ARI + P T + AP
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAP 180
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 23 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 78
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 79 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 135
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-- 193
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 194 --VKWYAP 199
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 129 IDLRKLNMGDA-FAQGAFGKLYRGTYN----GEEVAIKILERPENDPEKAXXXXXXXXXX 183
+D + L + D G FG + +G Y + VA+KIL+ NDP
Sbjct: 23 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP----ALKDELLAE 78
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L +P IVR IG C W +V E A+ G + ++L +QNR V K ++
Sbjct: 79 ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYL--QQNRHVKDKNIIELVHQ 135
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--------IEVQTEGMTPET 295
V+ GM Y+ +HRDL + N+L+ + KI+DFG+++ + QT G P
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-- 193
Query: 296 GTYRWMAP 303
+W AP
Sbjct: 194 --VKWYAP 199
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 14/190 (7%)
Query: 118 TEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXX 176
T GL + W ID + L G FG + G + G+ +VAIK+++ +
Sbjct: 2 TAGL-GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-------EGSMS 53
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
+ L H +V+ G C K I+TEY G + +L + ++R +L
Sbjct: 54 EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL 113
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETG 296
++ DV M Y+ +HRDL + N L+ +K++DFG++R + E T G
Sbjct: 114 -LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVG 171
Query: 297 T---YRWMAP 303
+ RW P
Sbjct: 172 SKFPVRWSPP 181
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 11/180 (6%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXXXX 185
W ID + L G FG + G + G+ +VAIK+++ +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-------EGSMSEDEFIEEAK 56
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
+ L H +V+ G C K I+TEY G + +L + ++R +L ++ DV
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVC 115
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY--RWMAP 303
M Y+ +HRDL + N L+ +K++DFG++R + E + + RW P
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPP 175
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 143 GAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GA+G +Y R ++G VA+K + P N E L +HPN+VR +
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 201 ACR-----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
C + + +V E+ +R +L K +P + RG+ ++H
Sbjct: 74 VCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +N+L+ S ++K+ADFG+ARI + P T + AP
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAP 180
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXXXX 185
W ID + L G FG + G + G+ +VAIK+++ +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-------EGSMSEDEFIEEAK 56
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
+ L H +V+ G C K I+TEY G + +L + ++R +L ++ DV
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVC 115
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMA 302
M Y+ +HRDL + N L+ +K++DFG++R + E T G+ RW
Sbjct: 116 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSP 174
Query: 303 P 303
P
Sbjct: 175 P 175
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 29/202 (14%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEH----RA 78
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVP---- 233
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPE 138
Query: 234 --------LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIE 285
L+ + + VA+GM ++ IHRDL + N+L+ +KI DFG+AR +
Sbjct: 139 DLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR-D 197
Query: 286 VQTEGMTPETGTYR----WMAP 303
+ + G R WMAP
Sbjct: 198 IXKDPDXVRKGDARLPLKWMAP 219
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXXXX 185
W ID + L G FG + G + G+ +VAIK+++ +
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-------EGSMSEDEFIEEAK 55
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
+ L H +V+ G C K I+TEY G + +L + ++R +L ++ DV
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVC 114
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMA 302
M Y+ +HRDL + N L+ +K++DFG++R + E T G+ RW
Sbjct: 115 EAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSP 173
Query: 303 P 303
P
Sbjct: 174 P 174
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 31/204 (15%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 78
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K A
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEA 138
Query: 238 --------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ + VA+GM ++ IHRDL + N+L+ +KI DFG+AR
Sbjct: 139 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR 198
Query: 284 IEVQTEGMTPETGTYR----WMAP 303
++ + G R WMAP
Sbjct: 199 -DIYKDPDYVRKGDARLPLKWMAP 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 143 GAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GA+G +Y R ++G VA+K + P N E L +HPN+VR +
Sbjct: 15 GAYGTVYKARDPHSGHFVALKSVRVP-NGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 201 ACR-----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
C + + +V E+ +R +L K +P + RG+ ++H
Sbjct: 74 VCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC 132
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +N+L+ S ++K+ADFG+ARI + P T + AP
Sbjct: 133 IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAP 180
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ HPNI+R G + + IVTEY + GS+ FL + ++L V V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-VGMLRGVGA 162
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 302
GM Y+ LG +HRDL + N+L+ S+ K++DFG++R+ E + TG RW A
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTA 222
Query: 303 P 303
P
Sbjct: 223 P 223
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 14/195 (7%)
Query: 117 PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEK 172
PT+ + F D I + K+ F + G+L + VAIK L+ + ++
Sbjct: 31 PTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR 90
Query: 173 AXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSV 232
+ HPNI+R G K IVTE + GS+ FL K +
Sbjct: 91 -----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 233 PLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGM 291
++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG++R+ E E
Sbjct: 146 VIQL-VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 204
Query: 292 TPETG---TYRWMAP 303
G RW +P
Sbjct: 205 YTTRGGKIPIRWTSP 219
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G+EVA++I+++ + + + L HPNIV+
Sbjct: 31 KLARHILTGKEVAVRIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
+V EYA GG V +L + + K A + + + Y H+ ++HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 267 LIFSDKSIKIADFGVA 282
L+ +D +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G+EVA+KI+++ + + + L HPNIV+
Sbjct: 24 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 79
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
+V EYA GG V +L + + K A + + + Y H+ ++HRDLK++NL
Sbjct: 80 TLYLVMEYASGGEVFDYLV--AHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 137
Query: 267 LIFSDKSIKIADFGVA 282
L+ +D +IKIADFG +
Sbjct: 138 LLDADMNIKIADFGFS 153
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G+EVA++I+++ + + + L HPNIV+
Sbjct: 31 KLARHILTGKEVAVRIIDKTQLN----SSSLQKLFREVRIMKVLNHPNIVKLFEVIETEK 86
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
+V EYA GG V +L + + K A + + + Y H+ ++HRDLK++NL
Sbjct: 87 TLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 267 LIFSDKSIKIADFGVA 282
L+ +D +IKIADFG +
Sbjct: 145 LLDADMNIKIADFGFS 160
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 17/206 (8%)
Query: 109 RALMDSNS---PTEGLENF----DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIK 161
R +D ++ PT+ + F D I + K+ F + G+L + VAIK
Sbjct: 20 RTFVDPHTFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIK 79
Query: 162 ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVR 221
L+ + ++ + HPNI+R G K IVTE + GS+
Sbjct: 80 TLKVGYTEKQR-----RDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 222 QFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
FL K + ++L V +A GM Y+ +G +HRDL + N+LI S+ K++DFG+
Sbjct: 135 SFLRKHDAQFTVIQL-VGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGL 193
Query: 282 ARI-EVQTEGMTPETG---TYRWMAP 303
+R+ E E G RW +P
Sbjct: 194 SRVLEDDPEAAYTTRGGKIPIRWTSP 219
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 143 GAFGKLYRGTYNGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FGK+Y+ V A K+++ K+ LA+ HPNIV+ +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDT------KSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTK--RQNRSVPLKLAVKQALDVARGMAYVHRLGLIH 258
A I+ E+ GG+V + + R +++ KQ LD + Y+H +IH
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIH 131
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 303
RDLK+ N+L D IK+ADFGV+ +T ++ GT WMAP
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAP 178
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKA 173
G E+ D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 1 GSEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---- 56
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQN 229
L +L+H NIV++ G C R+ + ++ EY GS+R +L K +
Sbjct: 57 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKE 112
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
R +KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 113 RIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 290 GMT----PETGTYRWMAP 303
P W AP
Sbjct: 172 EXXKVKEPGESPIFWYAP 189
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ HPNI+R G + + IVTEY + GS+ FL + ++L V V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQL-VGMLRGVGA 162
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 302
GM Y+ LG +HRDL + N+L+ S+ K++DFG++R+ E + TG RW A
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTA 222
Query: 303 P 303
P
Sbjct: 223 P 223
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 14/181 (7%)
Query: 129 IDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXX 183
+D+ + +G +G +Y R GE VA+K + E P A
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL---- 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
L L HPNIV+ + +V E+ +++F+ +PL L
Sbjct: 60 ---LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMA 302
+ +G+A+ H ++HRDLK NLLI ++ +IK+ADFG+AR V T E T + A
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 175
Query: 303 P 303
P
Sbjct: 176 P 176
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPEND 169
PT+ N ++W L G GAFGK+ T G +VA+K+L+ +
Sbjct: 24 PTQLPYN-EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 82
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----- 224
EK +H NIV +GAC ++TEY G + FL
Sbjct: 83 DEKEALMSELKIMSHLG----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 138
Query: 225 ---TKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
K R + L+ + + VA+GMA++ IHRD+ + N+L+ + KI DFG+
Sbjct: 139 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 198
Query: 282 ARIEVQTEGMTPETGTYR----WMAP 303
AR ++ + G R WMAP
Sbjct: 199 AR-DIMNDSNYIVKGNARLPVKWMAP 223
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 38/173 (21%)
Query: 142 QGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
+GAFG++++ G VA+K+L+ E + +A +PN
Sbjct: 57 EGAFGRVFQARAPGLLPYEPFTMVAVKMLKE-----EASADMQADFQREAALMAEFDNPN 111
Query: 195 IVRFIGACR--KPMVWCIVTEYAKGGSVRQFLTKRQNRSV------------------PL 234
IV+ +G C KPM C++ EY G + +FL +V P
Sbjct: 112 IVKLLGVCAVGKPM--CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 235 KLAVKQALDVAR----GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
L+ + L +AR GMAY+ +HRDL + N L+ + +KIADFG++R
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 147 KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
KL R G+EVA+KI+++ + + L HPNIV+
Sbjct: 31 KLARHILTGKEVAVKIIDKTQLN----SSSLQKLFREVRIXKVLNHPNIVKLFEVIETEK 86
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
+V EYA GG V +L K A + + + Y H+ ++HRDLK++NL
Sbjct: 87 TLYLVXEYASGGEVFDYLVAHGRXKE--KEARAKFRQIVSAVQYCHQKFIVHRDLKAENL 144
Query: 267 LIFSDKSIKIADFGVA 282
L+ +D +IKIADFG +
Sbjct: 145 LLDADXNIKIADFGFS 160
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 89/206 (43%), Gaps = 25/206 (12%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPEND 169
PT+ N ++W L G GAFGK+ T G +VA+K+L+ +
Sbjct: 32 PTQLPYN-EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----- 224
EK +H NIV +GAC ++TEY G + FL
Sbjct: 91 DEKEALMSELKIMSHLG----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 146
Query: 225 ---TKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
K R + L+ + + VA+GMA++ IHRD+ + N+L+ + KI DFG+
Sbjct: 147 ADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGL 206
Query: 282 ARIEVQTEGMTPETGTYR----WMAP 303
AR ++ + G R WMAP
Sbjct: 207 AR-DIMNDSNYIVKGNARLPVKWMAP 231
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKA 173
E+ D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 5 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---- 60
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQN 229
L +L+H NIV++ G C R+ + ++ EY GS+R +L K +
Sbjct: 61 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKE 116
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
R +KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 117 RIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 175
Query: 290 GMT----PETGTYRWMAP 303
P W AP
Sbjct: 176 EXXKVKEPGESPIFWYAP 193
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKA 173
E+ D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 3 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---- 58
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQN 229
L +L+H NIV++ G C R+ + ++ EY GS+R +L K +
Sbjct: 59 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKE 114
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
R +KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 115 RIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 173
Query: 290 GMT----PETGTYRWMAP 303
P W AP
Sbjct: 174 EXXKVKEPGESPIFWYAP 191
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKA 173
E+ D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 4 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---- 59
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQN 229
L +L+H NIV++ G C R+ + ++ EY GS+R +L K +
Sbjct: 60 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKE 115
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
R +KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 116 RIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 174
Query: 290 GMT----PETGTYRWMAP 303
P W AP
Sbjct: 175 EXXKVKEPGESPIFWYAP 192
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 140 FAQGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
+G FGK+Y+G +G VA+K L+ E+ ++ H N++R
Sbjct: 46 LGRGGFGKVYKGRLADGTLVAVKRLKE-----ERXQGGELQFQTEVEMISMAVHRNLLRL 100
Query: 199 IGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ--ALDVARGMAYVHR--- 253
G C P +V Y GSV L +R PL +Q AL ARG+AY+H
Sbjct: 101 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 160
Query: 254 LGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+IHRD+K+ N+L+ + + DFG+A++
Sbjct: 161 PKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 130 DLRKLNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL 187
+LRKL + G FG +++G + GE + I + + D + +
Sbjct: 32 ELRKLKV---LGSGVFGTVHKGVWIPEGESIKIPVCIKVIED-KSGRQSFQAVTDHMLAI 87
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALDVAR 246
+L H +IVR +G C + +VT+Y GS+ + RQ+R ++ +L + + +A+
Sbjct: 88 GSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGVQIAK 144
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-------EVQTEGMTPETGTYR 299
GM Y+ G++HR+L + N+L+ S +++ADFGVA + + +E TP +
Sbjct: 145 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP----IK 200
Query: 300 WMA 302
WMA
Sbjct: 201 WMA 203
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKA 173
E+ D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 29 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---- 84
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQN 229
L +L+H NIV++ G C R+ + ++ EY GS+R +L K +
Sbjct: 85 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKE 140
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
R +KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 141 RIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199
Query: 290 GMT----PETGTYRWMAP 303
P W AP
Sbjct: 200 EXXKVKEPGESPIFWYAP 217
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 130 DLRKLNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL 187
+LRKL + G FG +++G + GE + I + + D + +
Sbjct: 14 ELRKLKV---LGSGVFGTVHKGVWIPEGESIKIPVCIKVIED-KSGRQSFQAVTDHMLAI 69
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALDVAR 246
+L H +IVR +G C + +VT+Y GS+ + RQ+R ++ +L + + +A+
Sbjct: 70 GSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHV--RQHRGALGPQLLLNWGVQIAK 126
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-------EVQTEGMTPETGTYR 299
GM Y+ G++HR+L + N+L+ S +++ADFGVA + + +E TP +
Sbjct: 127 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTP----IK 182
Query: 300 WMA 302
WMA
Sbjct: 183 WMA 185
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 140 FAQGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
+G FGK+Y+G +G VA+K L+ E+ ++ H N++R
Sbjct: 38 LGRGGFGKVYKGRLADGXLVAVKRLKE-----ERTQGGELQFQTEVEMISMAVHRNLLRL 92
Query: 199 IGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ--ALDVARGMAYVHR--- 253
G C P +V Y GSV L +R PL +Q AL ARG+AY+H
Sbjct: 93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCD 152
Query: 254 LGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+IHRD+K+ N+L+ + + DFG+A++
Sbjct: 153 PKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ HPNI+ G K IVTEY + GS+ FL K + ++L V ++
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQL-VGMLRGISA 135
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPETG---TYRWMA 302
GM Y+ +G +HRDL + N+LI S+ K++DFG++R+ E E G RW A
Sbjct: 136 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTA 195
Query: 303 P 303
P
Sbjct: 196 P 196
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKA 173
E+ D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 2 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---- 57
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQN 229
L +L+H NIV++ G C R+ + ++ EY GS+R +L K +
Sbjct: 58 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKE 113
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
R +KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 114 RIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 172
Query: 290 GMT----PETGTYRWMAP 303
P W AP
Sbjct: 173 EXXKVKEPGESPIFWYAP 190
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRG----TYNGE---EVAIKILERPENDPEKAXXXX 177
DEW + K+ + QG+FG +Y G GE VA+K + + E+
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 66
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------NR 230
T H +VR +G K +V E G ++ +L + R
Sbjct: 67 EASVMKGF---TCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 231 SVP-LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 181
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWMAP
Sbjct: 182 XXRKGGKGLLP----VRWMAP 198
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRG----TYNGE---EVAIKILERPENDPEKAXXXX 177
DEW + K+ + QG+FG +Y G GE VA+K + + E+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------NR 230
T H +VR +G K +V E G ++ +L + R
Sbjct: 70 EASVMKGF---TCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 231 SVP-LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWMAP
Sbjct: 185 XXRKGGKGLLP----VRWMAP 201
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 16/171 (9%)
Query: 143 GAFGKLYRG---TYNGEE---VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
G FG++Y+G T +G++ VAIK L+ + ++ + H NI+
Sbjct: 55 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI-----MGQFSHHNII 109
Query: 197 RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGL 256
R G K I+TEY + G++ +FL ++ L+L V +A GM Y+ +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-VGMLRGIAAGMKYLANMNY 168
Query: 257 IHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPETG---TYRWMAP 303
+HRDL + N+L+ S+ K++DFG++R+ E E +G RW AP
Sbjct: 169 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 138 DAFAQGAFGKLYRGTYN--GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNI 195
D +G+FG++Y+G N E VAIKI+ D E+A L+ P I
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKII-----DLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 196 VRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
R+ G+ K I+ EY GGS L + +++ L +G+ Y+H
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREIL---KGLDYLHSER 136
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 303
IHRD+K+ N+L+ +K+ADFGVA T+ GT WMAP
Sbjct: 137 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 185
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 72 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 186
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 187 XXRKGGKGLLP----VRWMSP 203
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRG----TYNGE---EVAIKILERPENDPEKAXXXX 177
DEW + K+ + QG+FG +Y G GE VA+K + + E+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------NR 230
T H +VR +G K +V E G ++ +L + R
Sbjct: 70 EASVMKGF---TCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 231 SVP-LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD 184
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWMAP
Sbjct: 185 XXRKGGKGLLP----VRWMAP 201
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 99
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 100 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 154
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 214
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 215 YYRKGGKGLLP----VRWMSP 231
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 71
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 72 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 126
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 186
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 187 YYRKGGKGLLP----VRWMSP 203
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 63 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 117
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 118 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD 177
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 178 XXRKGGKGLLP----VRWMSP 194
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAX 174
G+ENF + + +G +G +Y R GE VA+K + E P A
Sbjct: 1 GMENFQK----------VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI 50
Query: 175 XXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
L L HPNIV+ + +V E+ +++F+ +PL
Sbjct: 51 REISL-------LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPL 102
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTP 293
L + +G+A+ H ++HRDLK NLLI ++ +IK+ADFG+AR V T
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 294 ETGTYRWMAP 303
E T + AP
Sbjct: 163 EVVTLWYRAP 172
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 10/189 (5%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXX 178
E + D I + K+ F + G+L + VAIK L+ + ++
Sbjct: 8 EFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-----R 62
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAV 238
+ HPNI+R G K IVTE + GS+ FL K + ++L V
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-V 121
Query: 239 KQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPETG- 296
+A GM Y+ +G +HRDL + N+LI S+ K++DFG++R+ E E G
Sbjct: 122 GMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGG 181
Query: 297 --TYRWMAP 303
RW +P
Sbjct: 182 KIPIRWTSP 190
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRG----TYNGE---EVAIKILERPENDPEKAXXXX 177
DEW + K+ + QG+FG +Y G GE VA+K + + E+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------NR 230
T H +VR +G K +V E G ++ +L + R
Sbjct: 70 EASVMKGF---TCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 231 SVP-LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWMAP
Sbjct: 185 YYRKGGKGLLP----VRWMAP 201
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 68
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 69 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 123
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 183
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 184 YYRKGGKGLLP----VRWMSP 200
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 65 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 179
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 180 YYRKGGKGLLP----VRWMSP 196
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 91/201 (45%), Gaps = 33/201 (16%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
E ++DL L + + +G +G +Y+G+ + VA+K+ A
Sbjct: 7 EPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFS-------FANRQNFINEKNIY 59
Query: 186 XLATLKHPNIVRFIGACRKP-----MVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ 240
+ ++H NI RFI + M + +V EY GS+ ++L+ + V + +
Sbjct: 60 RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVS---SCRL 116
Query: 241 ALDVARGMAYVH---------RLGLIHRDLKSDNLLIFSDKSIKIADFGVA--------- 282
A V RG+AY+H + + HRDL S N+L+ +D + I+DFG++
Sbjct: 117 AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLV 176
Query: 283 RIEVQTEGMTPETGTYRWMAP 303
R + E GT R+MAP
Sbjct: 177 RPGEEDNAAISEVGTIRYMAP 197
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 71 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 186 YYRKGGKGLLP----VRWMSP 202
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 143 GAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXX--LATLKHPNIVRF 198
GA+G +Y R ++G VA+K + P L +HPN+VR
Sbjct: 20 GAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRL 79
Query: 199 IGACR-----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHR 253
+ C + + +V E+ +R +L K +P + RG+ ++H
Sbjct: 80 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 138
Query: 254 LGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +N+L+ S ++K+ADFG+ARI +TP T + AP
Sbjct: 139 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAP 188
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 70
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 71 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 125
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 185
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 186 YYRKGGKGLLP----VRWMSP 202
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRG----TYNGE---EVAIKILERPENDPEKAXXXX 177
DEW + K+ + QG+FG +Y G GE VA+K + + E+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------NR 230
T H +VR +G K +V E G ++ +L + R
Sbjct: 70 EASVMKGF---TCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 231 SVP-LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQT- 288
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETA 184
Query: 289 ------EGMTPETGTYRWMAP 303
+G+ P RWMAP
Sbjct: 185 YYRKGGKGLLP----VRWMAP 201
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXX 178
D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE------HLR 56
Query: 179 XXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
L +L+H NIV++ G C R+ + ++ EY GS+R +L K + R +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGM--- 291
KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 115 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173
Query: 292 -TPETGTYRWMAP 303
P W AP
Sbjct: 174 KEPGESPIFWYAP 186
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 78 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 132
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 193 YYRKGGKGLLP----VRWMSP 209
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 143 GAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GAFGK+Y+ G A K++E K+ LAT HP IV+ +G
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIET------KSEEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTK--RQNRSVPLKLAVKQALDVARGMAYVHRLGLIH 258
A I+ E+ GG+V + + R +++ +Q L+ + ++H +IH
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE---ALNFLHSKRIIH 140
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 303
RDLK+ N+L+ + I++ADFGV+ ++T + GT WMAP
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 186
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 143 GAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GAFGK+Y+ G A K++E K+ LAT HP IV+ +G
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIET------KSEEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTK--RQNRSVPLKLAVKQALDVARGMAYVHRLGLIH 258
A I+ E+ GG+V + + R +++ +Q L+ + ++H +IH
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLE---ALNFLHSKRIIH 132
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 303
RDLK+ N+L+ + I++ADFGV+ ++T + GT WMAP
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAP 178
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKA 173
E+ D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 1 AFEDRDPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---- 56
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQN 229
L +L+H NIV++ G C R+ + ++ E+ GS+R++L K +
Sbjct: 57 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEFLPYGSLREYLQKHKE 112
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
R +KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 113 RIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 290 GMT----PETGTYRWMAP 303
P W AP
Sbjct: 172 EXXKVKEPGESPIFWYAP 189
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 132 RKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLAT 189
+K + QGA G +Y G+EVAI+ + + P+K
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN---- 74
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
K+PNIV ++ + +V EY GGS+ +T+ + ++ L + +
Sbjct: 75 -KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALE 130
Query: 250 YVHRLGLIHRDLKSDNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
++H +IHRD+KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 86/196 (43%), Gaps = 16/196 (8%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYN--GEE---VAIKILERPENDPE 171
P + + F + ID + + G FG++ G G+ VAIK L+ D +
Sbjct: 15 PNQAVREFAK-EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQ 73
Query: 172 KAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS 231
+ + HPNI+ G K I+TEY + GS+ FL K R
Sbjct: 74 R-----RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRF 128
Query: 232 VPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEG 290
++L V + GM Y+ + +HRDL + N+L+ S+ K++DFG++R+ E E
Sbjct: 129 TVIQL-VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA 187
Query: 291 MTPETG---TYRWMAP 303
G RW AP
Sbjct: 188 AYTTRGGKIPIRWTAP 203
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXX 178
D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE------HLR 56
Query: 179 XXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
L +L+H NIV++ G C R+ + ++ EY GS+R +L K + R +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT-- 292
KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 115 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 293 --PETGTYRWMAP 303
P W AP
Sbjct: 174 KEPGESPIFWYAP 186
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 132 RKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLAT 189
+K + QGA G +Y G+EVAI+ + + P+K
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN---- 74
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
K+PNIV ++ + +V EY GGS+ +T+ + ++ L + +
Sbjct: 75 -KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALE 130
Query: 250 YVHRLGLIHRDLKSDNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
++H +IHRD+KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAP 185
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 62
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI ++ +IK+ADFG+AR V T E T + AP
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 173
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 23/186 (12%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
R L +G FG + Y+ GE VA+K L+ +
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE------HLRDFEREIE 81
Query: 186 XLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQA 241
L +L+H NIV++ G C R+ + ++ EY GS+R +L K + R +KL ++
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYT 138
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT----PETGT 297
+ +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q + P
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 298 YRWMAP 303
W AP
Sbjct: 199 IFWYAP 204
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXX 182
NFDE I + G+ +G FG +Y+G N VA+K L + +
Sbjct: 26 NFDERPISVG----GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE--ELKQQFDQ 79
Query: 183 XXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLK--LAVKQ 240
+A +H N+V +G C+V Y GS+ L+ + + PL + K
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKI 138
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIE---VQTEGMTPETGT 297
A A G+ ++H IHRD+KS N+L+ + KI+DFG+AR QT + GT
Sbjct: 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGT 198
Query: 298 YRWMAP 303
+MAP
Sbjct: 199 TAYMAP 204
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXXX 178
+W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLTERE 71
Query: 179 XXXXXXXXLATL-KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L+ L H NIV +GAC ++TEY G + FL ++++ + K +
Sbjct: 72 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 131
Query: 238 ----------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
+ + VA+GMA++ IHRDL + N+L+ + KI DFG+
Sbjct: 132 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 191
Query: 282 ARIEVQTEGMTPETGTYR----WMAP 303
AR +++ + G R WMAP
Sbjct: 192 AR-DIKNDSNYVVKGNARLPVKWMAP 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXX 178
D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE------HLR 55
Query: 179 XXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
L +L+H NIV++ G C R+ + ++ EY GS+R +L K + R +
Sbjct: 56 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHI 113
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT-- 292
KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 114 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 293 --PETGTYRWMAP 303
P W AP
Sbjct: 173 KEPGESPIFWYAP 185
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 132 RKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLAT 189
+K + QGA G +Y G+EVAI+ + + P+K
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN---- 74
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
K+PNIV ++ + +V EY GGS+ +T+ + ++ L + +
Sbjct: 75 -KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALE 130
Query: 250 YVHRLGLIHRDLKSDNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
++H +IHRD+KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 131 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 185
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXX 178
D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE------HLR 56
Query: 179 XXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
L +L+H NIV++ G C R+ + ++ EY GS+R +L K + R +
Sbjct: 57 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHI 114
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT-- 292
KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 115 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 293 --PETGTYRWMAP 303
P W AP
Sbjct: 174 KEPGESPIFWYAP 186
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 132 RKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLAT 189
+K + QGA G +Y G+EVAI+ + + P+K
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN---- 75
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
K+PNIV ++ + +V EY GGS+ +T+ + ++ L + +
Sbjct: 76 -KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALE 131
Query: 250 YVHRLGLIHRDLKSDNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
++H +IHRD+KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 132 FLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAP 186
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 23/186 (12%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
R L +G FG + Y+ GE VA+K L+ +
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE------HLRDFEREIE 81
Query: 186 XLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQA 241
L +L+H NIV++ G C R+ + ++ EY GS+R +L K + R +KL ++
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHIKL-LQYT 138
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT----PETGT 297
+ +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q + P
Sbjct: 139 SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 298 YRWMAP 303
W AP
Sbjct: 199 IFWYAP 204
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 24/191 (12%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKA 173
E +ENF + + +G +G +Y R GE VA+K + E P A
Sbjct: 7 EFMENFQK----------VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA 56
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP 233
L L HPNIV+ + +V E+ +++F+ +P
Sbjct: 57 IREISL-------LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP 108
Query: 234 LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMT 292
L L + +G+A+ H ++HRDLK NLLI ++ +IK+ADFG+AR V T
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 168
Query: 293 PETGTYRWMAP 303
E T + AP
Sbjct: 169 HEVVTLWYRAP 179
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 61
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI ++ +IK+ADFG+AR V T E T + AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 60
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI ++ +IK+ADFG+AR V T E T + AP
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 24/191 (12%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKA 173
E +ENF + + +G +G +Y R GE VA+K + E P A
Sbjct: 7 EFMENFQK----------VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA 56
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP 233
L L HPNIV+ + +V E+ +++F+ +P
Sbjct: 57 IREISL-------LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIP 108
Query: 234 LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMT 292
L L + +G+A+ H ++HRDLK NLLI ++ +IK+ADFG+AR V T
Sbjct: 109 LPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 168
Query: 293 PETGTYRWMAP 303
E T + AP
Sbjct: 169 HEVVTLWYRAP 179
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 61
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI ++ +IK+ADFG+AR V T E T + AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 60
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI ++ +IK+ADFG+AR V T E T + AP
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXX 178
D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE------HLR 54
Query: 179 XXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
L +L+H NIV++ G C R+ + ++ EY GS+R +L K + R +
Sbjct: 55 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHI 112
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT-- 292
KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 113 KL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 171
Query: 293 --PETGTYRWMAP 303
P W AP
Sbjct: 172 KEPGESPIFWYAP 184
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 142 QGAFGKLYRG---TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
+GA+GK+++ G VA+K + R + E L T +HPN+VR
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL 79
Query: 199 IGACR-----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHR 253
C + +V E+ + +L K VP + + RG+ ++H
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 254 LGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK N+L+ S IK+ADFG+ARI +T T + AP
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYN--GEE---VAIKILERPENDPEKAXXXXXXXXXX 183
ID + + G FG++ G G+ VAIK L+ D ++
Sbjct: 11 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-----RDFLSE 65
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ HPNI+ G K I+TEY + GS+ FL K R ++L V
Sbjct: 66 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRG 124
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPETG---TYR 299
+ GM Y+ + +HRDL + N+L+ S+ K++DFG++R+ E E G R
Sbjct: 125 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 184
Query: 300 WMAP 303
W AP
Sbjct: 185 WTAP 188
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXXX 178
+W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 33 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLTERE 87
Query: 179 XXXXXXXXLATL-KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L+ L H NIV +GAC ++TEY G + FL ++++ + K +
Sbjct: 88 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 147
Query: 238 ----------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
+ + VA+GMA++ IHRDL + N+L+ + KI DFG+
Sbjct: 148 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 207
Query: 282 ARIEVQTEGMTPETGTYR----WMAP 303
AR +++ + G R WMAP
Sbjct: 208 AR-DIKNDSNYVVKGNARLPVKWMAP 232
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRG----TYNGE---EVAIKILERPENDPEKAXXXX 177
DEW + K+ + QG+FG +Y G GE VA+K + + E+
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 70
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------NR 230
T H +VR +G K +V E G ++ +L + R
Sbjct: 71 EASVMKGF---TCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 125
Query: 231 SVP-LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HR+L + N ++ D ++KI DFG+ R +T+
Sbjct: 126 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 185
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWMAP
Sbjct: 186 YYRKGGKGLLP----VRWMAP 202
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYN--GEE---VAIKILERPENDPEKAXXXXXXXXXX 183
ID + + G FG++ G G+ VAIK L+ D ++
Sbjct: 5 IDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQR-----RDFLSE 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ HPNI+ G K I+TEY + GS+ FL K R ++L V
Sbjct: 60 ASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-VGMLRG 118
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPETG---TYR 299
+ GM Y+ + +HRDL + N+L+ S+ K++DFG++R+ E E G R
Sbjct: 119 IGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR 178
Query: 300 WMAP 303
W AP
Sbjct: 179 WTAP 182
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLA 188
ID ++LN + G+L++G + G ++ +K+L+ + K+ L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPR----LR 62
Query: 189 TLKHPNIVRFIGACRKPMVW--CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
HPN++ +GAC+ P ++T + GS+ L + N V AVK ALD+AR
Sbjct: 63 IFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMAR 122
Query: 247 GMAYVHRL-GLIHRD-LKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
GMA++H L LI R L S +++I D + +I+ V + Q+ G W+AP
Sbjct: 123 GMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADV-KFSFQSPG---RMYAPAWVAP 177
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRG----TYNGE---EVAIKILERPENDPEKAXXXX 177
DEW + K+ + QG+FG +Y G GE VA+K + + E+
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLN 69
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------NR 230
T H +VR +G K +V E G ++ +L + R
Sbjct: 70 EASVMKGF---TCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 231 SVP-LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HR+L + N ++ D ++KI DFG+ R +T+
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETD 184
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWMAP
Sbjct: 185 YYRKGGKGLLP----VRWMAP 201
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 142 QGAFGKLYRG---TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
+GA+GK+++ G VA+K + R + E L T +HPN+VR
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL 79
Query: 199 IGACR-----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHR 253
C + +V E+ + +L K VP + + RG+ ++H
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 254 LGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK N+L+ S IK+ADFG+ARI +T T + AP
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL----TKRQNRSV- 232
+ ++VR +G + ++ E G ++ +L + +N V
Sbjct: 65 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N + D ++KI DFG+ R +T+
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETD 179
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 180 YYRKGGKGLLP----VRWMSP 196
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXXX 178
+W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 35 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLTERE 89
Query: 179 XXXXXXXXLATL-KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L+ L H NIV +GAC ++TEY G + FL ++++ + K +
Sbjct: 90 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 149
Query: 238 ----------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
+ + VA+GMA++ IHRDL + N+L+ + KI DFG+
Sbjct: 150 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 209
Query: 282 ARIEVQTEGMTPETGTYR----WMAP 303
AR +++ + G R WMAP
Sbjct: 210 AR-DIKNDSNYVVKGNARLPVKWMAP 234
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPEND 169
PT+ N ++W L G GAFGK+ T G +VA+K+L+ +
Sbjct: 32 PTQLPYN-EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ- 228
EK +H NIV +GAC ++TEY G + FL ++
Sbjct: 91 DEKEALMSELKIMSHLG----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR 146
Query: 229 -----------NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIA 277
N ++ + + + VA+GMA++ IHRD+ + N+L+ + KI
Sbjct: 147 VLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 206
Query: 278 DFGVARIEVQTEGMTPETGTYR----WMAP 303
DFG+AR ++ + G R WMAP
Sbjct: 207 DFGLAR-DIMNDSNYIVKGNARLPVKWMAP 235
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXX 182
NFDE I + G+ +G FG +Y+G N VA+K L + +
Sbjct: 26 NFDERPISVG----GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE--ELKQQFDQ 79
Query: 183 XXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLK--LAVKQ 240
+A +H N+V +G C+V Y GS+ L+ + + PL + K
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKI 138
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIE---VQTEGMTPETGT 297
A A G+ ++H IHRD+KS N+L+ + KI+DFG+AR QT GT
Sbjct: 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGT 198
Query: 298 YRWMAP 303
+MAP
Sbjct: 199 TAYMAP 204
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 142 QGAFGKLYRG---TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
+GA+GK+++ G VA+K + R + E L T +HPN+VR
Sbjct: 21 EGAYGKVFKARDLKNGGRFVALKRV-RVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRL 79
Query: 199 IGACR-----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHR 253
C + +V E+ + +L K VP + + RG+ ++H
Sbjct: 80 FDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS 138
Query: 254 LGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK N+L+ S IK+ADFG+ARI +T T + AP
Sbjct: 139 HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 65/129 (50%), Gaps = 22/129 (17%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ----------NRSVPLKLAVKQA 241
HPNI+ +GAC + EYA G++ FL K + S L+ +Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 242 L----DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEV---QTEGMTP 293
L DVARGM Y+ + IHRDL + N+L+ + KIADFG++R EV +T G P
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 204
Query: 294 ETGTYRWMA 302
RWMA
Sbjct: 205 ----VRWMA 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 131 LRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL- 187
+ +G+ +G+F +YR + G EVAIK++++ KA +
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDK------KAMYKAGMVQRVQNEVK 63
Query: 188 --ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQAL--D 243
LKHP+I+ +V E G + ++L +NR P +
Sbjct: 64 IHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSENEARHFMHQ 120
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMA 302
+ GM Y+H G++HRDL NLL+ + +IKIADFG+A ++++ E GT +++
Sbjct: 121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYIS 180
Query: 303 P 303
P
Sbjct: 181 P 181
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 65/129 (50%), Gaps = 22/129 (17%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ----------NRSVPLKLAVKQA 241
HPNI+ +GAC + EYA G++ FL K + S L+ +Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 242 L----DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEV---QTEGMTP 293
L DVARGM Y+ + IHRDL + N+L+ + KIADFG++R EV +T G P
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 194
Query: 294 ETGTYRWMA 302
RWMA
Sbjct: 195 ----VRWMA 199
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 16/152 (10%)
Query: 140 FAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
+G FGK+ Y+ GE VA+K L + + P+ L TL H
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADAGPQH----RSGWKQEIDILRTLYHE 93
Query: 194 NIVRFIGACRKP--MVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
+I+++ G C +V EY GS+R +L + L L +Q + GMAY+
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ---ICEGMAYL 150
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
H IHRDL + N+L+ +D+ +KI DFG+A+
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXXX 178
+W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLTERE 94
Query: 179 XXXXXXXXLATL-KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L+ L H NIV +GAC ++TEY G + FL ++++ + K +
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 238 ----------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
+ + VA+GMA++ IHRDL + N+L+ + KI DFG+
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 214
Query: 282 ARIEVQTEGMTPETGTYR----WMAP 303
AR +++ + G R WMAP
Sbjct: 215 AR-DIKNDSNYVVKGNARLPVKWMAP 239
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPE 171
P +ENF + + +G +G +Y R GE VA+K + E P
Sbjct: 1 PLGSMENFQK----------VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS 50
Query: 172 KAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS 231
A L L HPNIV+ + +V E+ +++F+
Sbjct: 51 TAIREISL-------LKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTG 102
Query: 232 VPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+PL L + +G+A+ H ++HRDLK +NLLI ++ +IK+ADFG+AR
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVA---IKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA I++ E P A L L H
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISL-------LKELNH 61
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI ++ +IK+ADFG+AR V T E T + AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVA---IKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA I++ E P A L L H
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISL-------LKELNH 60
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI ++ +IK+ADFG+AR V T E T + AP
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 62
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK +NLLI ++ +IK+ADFG+AR
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 67
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ----NRSV- 232
+ ++VR +G + ++ E G ++ +L + N V
Sbjct: 68 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 122
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 123 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 182
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 183 YYRKGGKGLLP----VRWMSP 199
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 62
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK +NLLI ++ +IK+ADFG+AR
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 8/168 (4%)
Query: 138 DAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNI 195
+ +G+FGK+ T+ ++VA+K + R K L L+HP+I
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISR---QLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 196 VRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
++ P +V EYA GG + ++ +++ + Q + A + Y HR
Sbjct: 72 IKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICA--IEYCHRHK 128
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +NLL+ + ++KIADFG++ I + G+ + AP
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 176
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK +NLLI ++ +IK+ADFG+AR
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNG-----EEVAIKILERPENDPEKAXXXXXXXXXX 183
ID+ + + + G FG++ RG VAIK L+ + ++
Sbjct: 11 IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR-----REFLSE 65
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ +HPNI+R G M I+TE+ + G++ FL + ++L V
Sbjct: 66 ASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQL-VGMLRG 124
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTY----- 298
+A GM Y+ + +HRDL + N+L+ S+ K++DFG++R + T +
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 299 -RWMAP 303
RW AP
Sbjct: 185 IRWTAP 190
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 60
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ ++ F+ +PL L + +G+A+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI ++ +IK+ADFG+AR V T E T + AP
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 31/201 (15%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXX 177
DEW + K+ M QG+FG +Y G G VAIK + + E+
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 77
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ----NRSV- 232
+ ++VR +G + ++ E G ++ +L + N V
Sbjct: 78 EASV-----MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVL 132
Query: 233 -PLKLA--VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P L+ ++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETD 192
Query: 290 -------GMTPETGTYRWMAP 303
G+ P RWM+P
Sbjct: 193 YYRKGGKGLLP----VRWMSP 209
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G+FG+ L + G+E A+K++ + + K L L HPNI+
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQV---KQKTDKESLLREVQLLKQLDHPNIM 113
Query: 197 RFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
+ + +V E GG + + +++++ V ++Q L G+ Y+H+
Sbjct: 114 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKNK 170
Query: 256 LIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +NLL+ S D +I+I DFG++ ++ M + GT ++AP
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 221
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ HPN+V G + IV E+ + G++ FL K + ++L V +A
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQL-VGMLRGIAA 156
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETG---TYRWMA 302
GM Y+ +G +HRDL + N+L+ S+ K++DFG++R IE E + TG RW A
Sbjct: 157 GMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTA 216
Query: 303 P 303
P
Sbjct: 217 P 217
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 142 QGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FGK+Y+G +G +VA+K PE + L+ +HP++V IG
Sbjct: 49 HGVFGKVYKGVLRDGAKVALK-----RRTPESSQGIEEFETEIET-LSFCRHPHLVSLIG 102
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFL--TKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIH 258
C + ++ +Y + G++++ L + S+ + ++ + ARG+ Y+H +IH
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 259 RDLKSDNLLIFSDKSIKIADFGVAR 283
RD+KS N+L+ + KI DFG+++
Sbjct: 163 RDVKSINILLDENFVPKITDFGISK 187
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNGE-EVAIKILERPENDPEKAXXXXXXXXXXXXXL 187
ID + L G FG + G + G+ +VAIK+++ + +
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-------EGSMSEDEFIEEAKVM 53
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
L H +V+ G C K I+TEY G + +L + ++R +L ++ DV
Sbjct: 54 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL-LEMCKDVCEA 112
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT---YRWMAP 303
M Y+ +HRDL + N L+ +K++DFG++R + E T G+ RW P
Sbjct: 113 MEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPP 170
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G+FG+ L + G+E A+K++ + + K L L HPNI+
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQV---KQKTDKESLLREVQLLKQLDHPNIM 112
Query: 197 RFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
+ + +V E GG + + +++++ V ++Q L G+ Y+H+
Sbjct: 113 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKNK 169
Query: 256 LIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +NLL+ S D +I+I DFG++ ++ M + GT ++AP
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 220
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 14/172 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 61
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+++ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI ++ +IK+ADFG+AR V T E T + AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 29/210 (13%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPEND 169
PT+ N ++W L G GAFGK+ T G +VA+K+L+ +
Sbjct: 32 PTQLPYN-EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ- 228
EK +H NIV +GAC ++TEY G + FL ++
Sbjct: 91 DEKEALMSELKIMSHLG----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR 146
Query: 229 -----------NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIA 277
N + + + + VA+GMA++ IHRD+ + N+L+ + KI
Sbjct: 147 VLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG 206
Query: 278 DFGVARIEVQTEGMTPETGTYR----WMAP 303
DFG+AR ++ + G R WMAP
Sbjct: 207 DFGLAR-DIMNDSNYIVKGNARLPVKWMAP 235
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 89/179 (49%), Gaps = 17/179 (9%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTY--NGE----EVAIKILER 165
M +P + L + T +LRK+ + GAFG +Y+G + +GE VAIK+L
Sbjct: 1 MSGAAPNQALLRILKET-ELRKVKV---LGSGAFGTVYKGIWIPDGENVKIPVAIKVLR- 55
Query: 166 PENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLT 225
EN KA +A + P + R +G C V +VT+ G + +
Sbjct: 56 -ENTSPKANKEILDEAYV---MAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVR 110
Query: 226 KRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+ + R L + + +A+GM+Y+ + L+HRDL + N+L+ S +KI DFG+AR+
Sbjct: 111 ENRGRLGSQDL-LNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARL 168
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 142 QGAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FGK+Y+G +G +VA+K PE + L+ +HP++V IG
Sbjct: 49 HGVFGKVYKGVLRDGAKVALK-----RRTPESSQGIEEFETEIET-LSFCRHPHLVSLIG 102
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFL--TKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIH 258
C + ++ +Y + G++++ L + S+ + ++ + ARG+ Y+H +IH
Sbjct: 103 FCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIH 162
Query: 259 RDLKSDNLLIFSDKSIKIADFGVAR 283
RD+KS N+L+ + KI DFG+++
Sbjct: 163 RDVKSINILLDENFVPKITDFGISK 187
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G+FG+ L + G+E A+K++ + + K L L HPNI+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQV---KQKTDKESLLREVQLLKQLDHPNIM 89
Query: 197 RFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
+ + +V E GG + + +++++ V ++Q L G+ Y+H+
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKNK 146
Query: 256 LIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +NLL+ S D +I+I DFG++ ++ M + GT ++AP
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 197
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 85/177 (48%), Gaps = 31/177 (17%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKIL--------ERPENDPEKAXXXXXXXXXXXXXLATLK 191
+G+FGK L + T +G + IK + ER E+ E A LA +K
Sbjct: 34 EGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAV------------LANMK 81
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD----VARG 247
HPNIV++ + + IV +Y +GG L KR N + Q LD +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGD----LFKRINAQKGVLFQEDQILDWFVQICLA 137
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 303
+ +VH ++HRD+KS N+ + D ++++ DFG+AR+ T E GT +++P
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSP 194
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 34/206 (16%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXXX 178
+W +L+ G GAFGK+ T G VA+K+L+ P
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-----PSAHLTERE 94
Query: 179 XXXXXXXXLATL-KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L+ L H NIV +GAC ++TEY G + FL ++++ + K +
Sbjct: 95 ALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTS 154
Query: 238 ----------------VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGV 281
+ + VA+GMA++ IHRDL + N+L+ + KI DFG+
Sbjct: 155 PAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL 214
Query: 282 ARIEVQTEGMTPETGTYR----WMAP 303
AR ++ + G R WMAP
Sbjct: 215 AR-HIKNDSNYVVKGNARLPVKWMAP 239
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 23/198 (11%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKA 173
E+ D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 1 AFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE---- 56
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQN 229
L +L+H NIV++ G C R+ + ++ EY GS+R +L
Sbjct: 57 --HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQAHAE 112
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
R +KL ++ + +GM Y+ IHRDL + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 113 RIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 171
Query: 290 GMT----PETGTYRWMAP 303
P W AP
Sbjct: 172 EXXKVKEPGESPIFWYAP 189
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPE 171
P +ENF + + +G +G +Y R GE VA+K + E P
Sbjct: 2 PLGSMENFQK----------VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS 51
Query: 172 KAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS 231
A L L HPNIV+ + +V E+ +++F+
Sbjct: 52 TAIREISL-------LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG 103
Query: 232 VPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+PL L + +G+A+ H ++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 104 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 78/167 (46%), Gaps = 13/167 (7%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GA+G+ L R E AIKI+ + + L L HPNI++
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSV----STSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 201 ACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
+ +V E KGG + + + + + V + +KQ L G+ Y+H+ ++HR
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS---GVTYLHKHNIVHR 160
Query: 260 DLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
DLK +NLL+ S D IKI DFG++ + + M GT ++AP
Sbjct: 161 DLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAP 207
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 61
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPE 171
P +ENF + + +G +G +Y R GE VA+K + E P
Sbjct: 1 PLGSMENFQK----------VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS 50
Query: 172 KAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS 231
A L L HPNIV+ + +V E+ +++F+
Sbjct: 51 TAIREISL-------LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG 102
Query: 232 VPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+PL L + +G+A+ H ++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 140 FAQGAFGKLYRG-TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
+GAFGK++ YN KIL + + + L L+H +IV+F
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 199 IGACRK--PMVWCIVTEYAKGGSVRQFLTKRQNRSV-------PLKLAVKQALDVAR--- 246
G C + P++ +V EY K G + +FL +V P +L Q L +A+
Sbjct: 81 YGVCVEGDPLI--MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 247 -GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-------GMTPETGTY 298
GM Y+ +HRDL + N L+ + +KI DFG++R T+ M P
Sbjct: 139 AGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLP----I 194
Query: 299 RWMAP 303
RWM P
Sbjct: 195 RWMPP 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 62
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 10 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 62
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 85
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 86 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 141
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK 201
Query: 300 WMA 302
WMA
Sbjct: 202 WMA 204
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 61
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ ++ F+ +PL L + +G+A+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK +NLLI ++ +IK+ADFG+AR
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 23/193 (11%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXX 178
D + R L +G FG + Y+ GE VA+K L+ +
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEE------HLR 57
Query: 179 XXXXXXXXLATLKHPNIVRFIGAC----RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
L +L+H NIV++ G C R+ + ++ EY GS+R +L K + R +
Sbjct: 58 DFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQKHKERIDHI 115
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGM--- 291
KL ++ + +GM Y+ IHR+L + N+L+ ++ +KI DFG+ ++ Q +
Sbjct: 116 KL-LQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 292 -TPETGTYRWMAP 303
P W AP
Sbjct: 175 KEPGESPIFWYAP 187
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 61
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 60
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 61
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 132 RKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLAT 189
+K + QGA G +Y G+EVAI+ + + P+K
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNL-QQQPKKELIINEILVMREN---- 75
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
K+PNIV ++ + +V EY GGS+ +T+ + ++ L + +
Sbjct: 76 -KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL---QALE 131
Query: 250 YVHRLGLIHRDLKSDNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
++H +IHR++KSDN+L+ D S+K+ DFG A+I + + GT WMAP
Sbjct: 132 FLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 186
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 61
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 91/183 (49%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 87
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 88 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 143
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--IEVQTEGMTPETGT---YR 299
A+GM ++ +HRDL + N ++ ++K+ADFG+AR ++ + + + +TG +
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 300 WMA 302
WMA
Sbjct: 204 WMA 206
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 60
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ +++F+ +PL L + +G+A+ H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 50 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 104
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 105 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 160
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 161 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 300 WMA 302
WMA
Sbjct: 221 WMA 223
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 29/209 (13%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKL-------NMGDAFAQGAFGKLYRGTY--NGEEVAIKI 162
M S+SP L+ IDL L + + G +G++Y+G + G+ AIK+
Sbjct: 2 MASDSPARSLDE-----IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKV 56
Query: 163 LERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKP-------MVWCIVTEYA 215
++ ++ E+ H NI + GA K +W +V E+
Sbjct: 57 MDVTGDEEEEIKQEINMLKKYSH------HRNIATYYGAFIKKNPPGMDDQLW-LVMEFC 109
Query: 216 KGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIK 275
GSV + + ++ + ++ RG++++H+ +IHRD+K N+L+ + +K
Sbjct: 110 GAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVK 169
Query: 276 IADFGV-ARIEVQTEGMTPETGTYRWMAP 303
+ DFGV A+++ GT WMAP
Sbjct: 170 LVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPE 171
P +ENF + + +G +G +Y R GE VA+K + E P
Sbjct: 1 PLGSMENFQK----------VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS 50
Query: 172 KAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS 231
A L L HPNIV+ + +V E+ ++ F+
Sbjct: 51 TAIREISL-------LKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTG 102
Query: 232 VPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+PL L + +G+A+ H ++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 103 IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 84
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 85 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 140
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 141 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 300 WMA 302
WMA
Sbjct: 201 WMA 203
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 86
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 142
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 300 WMA 302
WMA
Sbjct: 203 WMA 205
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 133 KLNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATL 190
+ N+ +G+FG++ + +E A+K++ N L L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI----NKASAKNKDTSTILREVELLKKL 78
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAY 250
HPNI++ + IV E GG + + KR+ S A + V G+ Y
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE--HDAARIIKQVFSGITY 136
Query: 251 VHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+H+ ++HRDLK +N+L+ S D IKI DFG++ Q M GT ++AP
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 11 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ ++ F+ +PL L + +G+A+ H
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 7/155 (4%)
Query: 131 LRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLA 188
L+ + G+FG+ L R +NG A+K+L++ + L+
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK---EIVVRLKQVEHTNDERLMLS 61
Query: 189 TLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGM 248
+ HP I+R G + ++ +Y +GG + L R+++ P +A A +V +
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFYAAEVCLAL 119
Query: 249 AYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Y+H +I+RDLK +N+L+ + IKI DFG A+
Sbjct: 120 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 86
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 142
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 143 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 300 WMA 302
WMA
Sbjct: 203 WMA 205
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 31 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 85
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 86 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 141
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 142 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 300 WMA 302
WMA
Sbjct: 202 WMA 204
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 8/145 (5%)
Query: 142 QGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G++G ++ R G+ VAIK E+DP L LKHPN+V +
Sbjct: 13 EGSYGVVFKCRNRDTGQIVAIKKFLESEDDP----VIKKIALREIRMLKQLKHPNLVNLL 68
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
R+ +V EY + + R R VP L + + + H+ IHR
Sbjct: 69 EVFRRKRRLHLVFEYCDHTVLHEL--DRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHR 126
Query: 260 DLKSDNLLIFSDKSIKIADFGVARI 284
D+K +N+LI IK+ DFG AR+
Sbjct: 127 DVKPENILITKHSVIKLCDFGFARL 151
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 81
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 82 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 137
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 138 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 300 WMA 302
WMA
Sbjct: 198 WMA 200
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 30/180 (16%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FG++++ + +G+ IK R + + EKA LA L H NIV + G
Sbjct: 22 GGFGQVFKAKHRIDGKTYVIK---RVKYNNEKAEREVKA-------LAKLDHVNIVHYNG 71
Query: 201 AC----------------RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
K I E+ G++ Q++ KR+ + LA++ +
Sbjct: 72 CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQI 131
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET-GTYRWMAP 303
+G+ Y+H LI+RDLK N+ + K +KI DFG+ ++ +G + GT R+M+P
Sbjct: 132 TKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRXRSKGTLRYMSP 190
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 51 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 105
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 106 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 161
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 162 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 300 WMA 302
WMA
Sbjct: 222 WMA 224
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 139 AFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
+G +G +Y G +V I I E PE D + LKH NIV++
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH----LKHKNIVQY 84
Query: 199 IGACRKPMVWCIVTEYAKGGSVRQFLTKR----QNRSVPLKLAVKQALDVARGMAYVHRL 254
+G+ + I E GGS+ L + ++ + KQ L+ G+ Y+H
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE---GLKYLHDN 141
Query: 255 GLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPE----TGTYRWMAP 303
++HRD+K DN+LI + + KI+DFG ++ + G+ P TGT ++MAP
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAP 192
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 13/151 (8%)
Query: 138 DAFAQGAFGKLY--RGTYNGEEVAIKILE---RPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ +G +G +Y R GE VA+K + E P A L L H
Sbjct: 12 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISL-------LKELNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
PNIV+ + +V E+ ++ F+ +PL L + +G+A+ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRDLK NLLI ++ +IK+ADFG+AR
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 83
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 84 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 139
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 140 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 300 WMA 302
WMA
Sbjct: 200 WMA 202
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 18/198 (9%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEE---VAIKILERPENDPE 171
P E + F + ID+ + + G FG++ G G+ VAIK L+ + +
Sbjct: 19 PNEAVREFAK-EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQ 77
Query: 172 KAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS 231
+ + HPN++ G K I+TE+ + GS+ FL + +
Sbjct: 78 R-----RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQF 132
Query: 232 VPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEG 290
++L V +A GM Y+ + +HRDL + N+L+ S+ K++DFG++R +E T
Sbjct: 133 TVIQL-VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 191
Query: 291 MTPETG-----TYRWMAP 303
T + RW AP
Sbjct: 192 PTYTSALGGKIPIRWTAP 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 140 FAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
+G FGK+ Y+ GE VA+K L + + P+ L TL H
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQH----RSGWKQEIDILRTLYHE 76
Query: 194 NIVRFIGACR----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
+I+++ G C K + +V EY GS+R +L + S+ L + A + GMA
Sbjct: 77 HIIKYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMA 131
Query: 250 YVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Y+H IHR+L + N+L+ +D+ +KI DFG+A+
Sbjct: 132 YLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 94/188 (50%), Gaps = 29/188 (15%)
Query: 134 LNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
L + + A+G FG +++ E VA+KI P D + L +KH
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIF--PIQDKQS-----WQNEYEVYSLPGMKHE 78
Query: 194 NIVRFIGACRKPM-----VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGM 248
NI++FIGA ++ +W ++T + + GS+ FL + V A +ARG+
Sbjct: 79 NILQFIGAEKRGTSVDVDLW-LITAFHEKGSLSDFL---KANVVSWNELCHIAETMARGL 134
Query: 249 AYVH----------RLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEV-QTEGMTP-ET 295
AY+H + + HRD+KS N+L+ ++ + IADFG+A + E ++ G T +
Sbjct: 135 AYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQV 194
Query: 296 GTYRWMAP 303
GT R+MAP
Sbjct: 195 GTRRYMAP 202
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 19/174 (10%)
Query: 139 AFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
+G +G +Y G +V I I E PE D + LKH NIV++
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH----LKHKNIVQY 70
Query: 199 IGACRKPMVWCIVTEYAKGGSVRQFLTKR----QNRSVPLKLAVKQALDVARGMAYVHRL 254
+G+ + I E GGS+ L + ++ + KQ L+ G+ Y+H
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE---GLKYLHDN 127
Query: 255 GLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPE----TGTYRWMAP 303
++HRD+K DN+LI + + KI+DFG ++ + G+ P TGT ++MAP
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSK---RLAGINPCTETFTGTLQYMAP 178
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 38/219 (17%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPEND 169
PT+ L ++W L G GAFGK+ T G +VA+K+L+ +
Sbjct: 17 PTQ-LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 75
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
EK +H NIV +GAC ++TEY G + FL ++
Sbjct: 76 DEKEALMSELKIMSHLG----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAE 131
Query: 230 RSVPLKLAVKQ---ALD------------------VARGMAYVHRLGLIHRDLKSDNLLI 268
+ LA Q LD VA+GMA++ IHRD+ + N+L+
Sbjct: 132 AMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL 191
Query: 269 FSDKSIKIADFGVARIEVQTEGMTPETGTYR----WMAP 303
+ KI DFG+AR ++ + G R WMAP
Sbjct: 192 TNGHVAKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAP 229
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 65/129 (50%), Gaps = 22/129 (17%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ----------NRSVPLKLAVKQA 241
HPNI+ +GAC + EYA G++ FL K + S L+ +Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 242 L----DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEV---QTEGMTP 293
L DVARGM Y+ + IHR+L + N+L+ + KIADFG++R EV +T G P
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLP 201
Query: 294 ETGTYRWMA 302
RWMA
Sbjct: 202 ----VRWMA 206
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 24 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 78
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 79 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 134
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT-----YR 299
A+GM Y+ +HRDL + N ++ ++K+ADFG+AR E + T +
Sbjct: 135 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 300 WMA 302
WMA
Sbjct: 195 WMA 197
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 31/200 (15%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXXXXXX 181
I L + + + FGK+Y+G G + VAIK L+ P +
Sbjct: 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 82
Query: 182 XXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS----VPLKLA 237
A L+HPN+V +G K ++ Y G + +FL R S
Sbjct: 83 R-----ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 238 VKQALD----------VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQ 287
VK AL+ +A GM Y+ ++H+DL + N+L++ ++KI+D G+ R EV
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR-EVY 196
Query: 288 TEGMTPETG----TYRWMAP 303
G RWMAP
Sbjct: 197 AADYYKLLGNSLLPIRWMAP 216
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVA 245
L +L HPNI++ + +VTE+ +GG + Q + + + +KQ L
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQIL--- 156
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMA 302
G+ Y+H+ ++HRD+K +N+L+ + S IKI DFG++ + + GT ++A
Sbjct: 157 SGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIA 216
Query: 303 P 303
P
Sbjct: 217 P 217
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 117 PTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPEND 169
PT+ N ++W L G GAFGK+ T G +VA+K+L+ +
Sbjct: 32 PTQLPYN-EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHA 90
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
EK +H NIV +GAC ++TEY G + FL +++
Sbjct: 91 DEKEALMSELKIMSHLG----QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRP 146
Query: 230 RSVPL----------KLAVKQAL----DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIK 275
+ +L+ + L VA+GMA++ IHRD+ + N+L+ + K
Sbjct: 147 PGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAK 206
Query: 276 IADFGVARIEVQTEGMTPETGTYR----WMAP 303
I DFG+AR ++ + G R WMAP
Sbjct: 207 IGDFGLAR-DIMNDSNYIVKGNARLPVKWMAP 237
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 83/200 (41%), Gaps = 31/200 (15%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXXXXXX 181
I L + + + FGK+Y+G G + VAIK L+ P +
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAML 65
Query: 182 XXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS----VPLKLA 237
A L+HPN+V +G K ++ Y G + +FL R S
Sbjct: 66 R-----ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 238 VKQALD----------VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQ 287
VK AL+ +A GM Y+ ++H+DL + N+L++ ++KI+D G+ R EV
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFR-EVY 179
Query: 288 TEGMTPETG----TYRWMAP 303
G RWMAP
Sbjct: 180 AADYYKLLGNSLLPIRWMAP 199
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 140 FAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
+G FGK+ Y+ GE VA+K L + + P+ L TL H
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKAL-KADCGPQH----RSGWKQEIDILRTLYHE 76
Query: 194 NIVRFIGACR----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
+I+++ G C K + +V EY GS+R +L + S+ L + A + GMA
Sbjct: 77 HIIKYKGCCEDQGEKSLQ--LVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMA 131
Query: 250 YVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Y+H IHR+L + N+L+ +D+ +KI DFG+A+
Sbjct: 132 YLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 16/196 (8%)
Query: 113 DSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDP 170
D P+ L+ + L N +G+FGK+ G E AIKIL++ D
Sbjct: 5 DRKQPSNNLDR-----VKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKK---DV 56
Query: 171 EKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQN 229
LA L P + + +C + + V EY GG + + +
Sbjct: 57 VIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK 116
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
P AV A +++ G+ ++H+ G+I+RDLK DN+++ S+ IKIADFG+ + E +
Sbjct: 117 FKEPQ--AVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK-EHMMD 173
Query: 290 GMTPE--TGTYRWMAP 303
G+T GT ++AP
Sbjct: 174 GVTTREFCGTPDYIAP 189
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXX 182
NFDE I + G+ +G FG +Y+G N VA+K L + +
Sbjct: 20 NFDERPISVG----GNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE--ELKQQFDQ 73
Query: 183 XXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLK--LAVKQ 240
+A +H N+V +G C+V Y GS+ L+ + + PL + K
Sbjct: 74 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCL-DGTPPLSWHMRCKI 132
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIE---VQTEGMTPETGT 297
A A G+ ++H IHRD+KS N+L+ + KI+DFG+AR Q GT
Sbjct: 133 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGT 192
Query: 298 YRWMAP 303
+MAP
Sbjct: 193 TAYMAP 198
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
I E+ G++ Q++ KR+ + LA++ + +G+ Y+H LIHRDLK N+ +
Sbjct: 111 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLV 170
Query: 270 SDKSIKIADFGVARIEVQTEGM-TPETGTYRWMAP 303
K +KI DFG+ ++ +G T GT R+M+P
Sbjct: 171 DTKQVKIGDFGLV-TSLKNDGKRTRSKGTLRYMSP 204
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 143 GAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FG +L R + E VA+K +ER E E +L+HPNIVRF
Sbjct: 29 GNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR-------SLRHPNIVRFKE 81
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
P IV EYA GG + + + S Q L G++Y H + + HRD
Sbjct: 82 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVSYCHAMQVCHRD 139
Query: 261 LKSDNLLIFSDKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
LK +N L+ + +KI DFG ++ V GT ++AP
Sbjct: 140 LKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 184
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 81/197 (41%), Gaps = 26/197 (13%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRG-TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL 187
I R + + +GAFGK++ YN K+L + + L
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELL 71
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR----------QNRSVPLKLA 237
L+H +IV+F G C +V EY K G + +FL Q R +L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 238 VKQAL----DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE---- 289
+ Q L +A GM Y+ +HRDL + N L+ ++ +KI DFG++R T+
Sbjct: 132 LSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRV 191
Query: 290 ---GMTPETGTYRWMAP 303
M P RWM P
Sbjct: 192 GGHTMLP----IRWMPP 204
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 130 DLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL 187
DLR++ G+FG +Y R N E VAIK + +++ L
Sbjct: 58 DLREI------GHGSFGAVYFARDVRNSEVVAIKKMSY---SGKQSNEKWQDIIKEVRFL 108
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQF-LTKRQNRSVPLKLAVKQALDVAR 246
L+HPN +++ G + +V EY G + + K+ + V + AL +
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL---Q 165
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE---TGTYRWMAP 303
G+AY+H +IHRD+K+ N+L+ +K+ DFG A I M P GT WMAP
Sbjct: 166 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAP 219
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 17/126 (13%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV------RQFLTKRQNRSVPLKLAVKQ 240
L +KH NIV P +V + GG + + F T++ ++ ++Q
Sbjct: 74 LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL-----IRQ 128
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGT 297
LD + Y+HR+G++HRDLK +NLL +S + I I+DFG++++E + + M+ GT
Sbjct: 129 VLD---AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGT 185
Query: 298 YRWMAP 303
++AP
Sbjct: 186 PGYVAP 191
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 7/99 (7%)
Query: 207 VWCIVTEYAKGGSVRQFLT-KRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDN 265
+W +V E+ +GG++ +T R N ++A L V R ++Y+H G+IHRD+KSD+
Sbjct: 117 LW-VVMEFLEGGALTDIVTHTRMNEE---QIATV-CLSVLRALSYLHNQGVIHRDIKSDS 171
Query: 266 LLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
+L+ SD IK++DFG A++ + GT WMAP
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAP 210
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 143 GAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FG +L R E VA+K +ER E E +L+HPNIVRF
Sbjct: 30 GNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHR-------SLRHPNIVRFKE 82
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
P IV EYA GG + + + S Q L G++Y H + + HRD
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVSYAHAMQVAHRD 140
Query: 261 LKSDNLLIFSDKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
LK +N L+ + +KIADFG ++ V GT ++AP
Sbjct: 141 LKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAP 185
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 33 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 87
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 88 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 143
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--IEVQTEGMTPETGT---YR 299
A+GM ++ +HRDL + N ++ ++K+ADFG+AR + + + + +TG +
Sbjct: 144 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 300 WMA 302
WMA
Sbjct: 204 WMA 206
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 37 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 91
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 92 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 147
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--IEVQTEGMTPETGT---YR 299
A+GM ++ +HRDL + N ++ ++K+ADFG+AR + + + + +TG +
Sbjct: 148 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 300 WMA 302
WMA
Sbjct: 208 WMA 210
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 86
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 142
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--IEVQTEGMTPETGT---YR 299
A+GM ++ +HRDL + N ++ ++K+ADFG+AR + + + + +TG +
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 300 WMA 302
WMA
Sbjct: 203 WMA 205
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 14/198 (7%)
Query: 92 VNRRGRVSHALSDDALARALMDS-NSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLYR 150
+ R+ + L + L L S +P + L + T + +K+ + GAFG +Y+
Sbjct: 12 IVRKRTLRRLLQERELVEPLTPSGEAPNQALLRILKET-EFKKIKV---LGSGAFGTVYK 67
Query: 151 GTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPM 206
G + GE+V I I+E E KA +A++ +P++ R +G C
Sbjct: 68 GLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYV---MASVDNPHVCRLLGICLTST 124
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
V ++T+ G + ++ + ++ ++ + + + +A+GM Y+ L+HRDL + N+
Sbjct: 125 VQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNV 182
Query: 267 LIFSDKSIKIADFGVARI 284
L+ + + +KI DFG+A++
Sbjct: 183 LVKTPQHVKITDFGLAKL 200
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G+FG+ L + G+E A+K++ + + K L L HPNI+
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQV---KQKTDKESLLREVQLLKQLDHPNIM 95
Query: 197 RFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
+ + +V E GG + + +++++ V ++Q L G+ Y+H+
Sbjct: 96 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS---GITYMHKNK 152
Query: 256 LIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +NLL+ S D +I+I DFG++ ++ M + GT ++AP
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 203
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 30 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 84
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 85 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 140
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--IEVQTEGMTPETGT---YR 299
A+GM ++ +HRDL + N ++ ++K+ADFG+AR + + + + +TG +
Sbjct: 141 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 300 WMA 302
WMA
Sbjct: 201 WMA 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 130 DLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL 187
DLR++ G+FG +Y R N E VAIK + +++ L
Sbjct: 19 DLREI------GHGSFGAVYFARDVRNSEVVAIKKMSY---SGKQSNEKWQDIIKEVRFL 69
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQF-LTKRQNRSVPLKLAVKQALDVAR 246
L+HPN +++ G + +V EY G + + K+ + V + AL +
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGAL---Q 126
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE---TGTYRWMAP 303
G+AY+H +IHRD+K+ N+L+ +K+ DFG A I M P GT WMAP
Sbjct: 127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASI------MAPANXFVGTPYWMAP 180
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 133 KLNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATL 190
+ N+ +G+FG++ + +E A+K++ N L L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI----NKASAKNKDTSTILREVELLKKL 78
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAY 250
HPNI++ + IV E GG + + KR+ S A + V G+ Y
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE--HDAARIIKQVFSGITY 136
Query: 251 VHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+H+ ++HRDLK +N+L+ S D IKI DFG++ Q M GT ++AP
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 37/210 (17%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXX 178
+W L G GAFGK+ T G +VA+K+L+ + E+
Sbjct: 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSE 98
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRS------ 231
H NIV +GAC ++ EY G + +L +KR+ S
Sbjct: 99 LKMMTQLG----SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEY 154
Query: 232 --------------VPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIA 277
+ + + A VA+GM ++ +HRDL + N+L+ K +KI
Sbjct: 155 ENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC 214
Query: 278 DFGVARIEVQTEGMTPETGTYR----WMAP 303
DFG+AR ++ ++ G R WMAP
Sbjct: 215 DFGLAR-DIMSDSNYVVRGNARLPVKWMAP 243
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 32 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 86
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 87 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 142
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--IEVQTEGMTPETGT---YR 299
A+GM ++ +HRDL + N ++ ++K+ADFG+AR + + + + +TG +
Sbjct: 143 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 300 WMA 302
WMA
Sbjct: 203 WMA 205
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 134 LNMGDAFAQGAFGKLYRGTY---NGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLA 188
++ + +G FG +Y GT +G+++ A+K L R + E + +
Sbjct: 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGII-----MK 145
Query: 189 TLKHPNIVRFIGACRK----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
HPN++ +G C + P+V V Y K G +R F+ + + + +K + L V
Sbjct: 146 DFSHPNVLSLLGICLRSEGSPLV---VLPYMKHGDLRNFI-RNETHNPTVKDLIGFGLQV 201
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--IEVQTEGMTPETGT---YR 299
A+GM ++ +HRDL + N ++ ++K+ADFG+AR + + + + +TG +
Sbjct: 202 AKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 261
Query: 300 WMA 302
WMA
Sbjct: 262 WMA 264
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 11/176 (6%)
Query: 133 KLNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATL 190
+ N+ +G+FG++ + +E A+K++ N L L
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVI----NKASAKNKDTSTILREVELLKKL 78
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAY 250
HPNI++ + IV E GG + + KR+ S A + V G+ Y
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE--HDAARIIKQVFSGITY 136
Query: 251 VHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+H+ ++HRDLK +N+L+ S D IKI DFG++ Q M GT ++AP
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAP 192
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 91/226 (40%), Gaps = 40/226 (17%)
Query: 114 SNSPTEG---------LENFDEWT------IDLRKLNMGDAFAQGAFGKLYRG-TYNGEE 157
S SPTEG +EN ++ I R + + +GAFGK++ +N
Sbjct: 8 SLSPTEGKGSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLP 67
Query: 158 VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKG 217
K+L + E + L L+H +IVRF G C + +V EY +
Sbjct: 68 EQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRH 127
Query: 218 GSVRQFLTKRQNRS---------VPLKLAVKQAL----DVARGMAYVHRLGLIHRDLKSD 264
G + +FL + P L + Q L VA GM Y+ L +HRDL +
Sbjct: 128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATR 187
Query: 265 NLLIFSDKSIKIADFGVAR-------IEVQTEGMTPETGTYRWMAP 303
N L+ +KI DFG++R V M P RWM P
Sbjct: 188 NCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP----IRWMPP 229
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+WT++ ++G +G FG +Y R + +A+K+L + EKA
Sbjct: 8 QWTLE--DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFK--TQLEKAGVEHQLRREV 63
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 64 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE--QRTATYITE 120
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S+ +KIADFG + + + T GT ++ P
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 179
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLA 188
ID ++LN + G+L++G + G ++ +K+L+ + K+ L
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPR----LR 62
Query: 189 TLKHPNIVRFIGACRKPMVW--CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
HPN++ +GAC+ P ++T + GS+ L + N V AVK ALD AR
Sbjct: 63 IFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXAR 122
Query: 247 GMAYVHRL-GLIHRD-LKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G A++H L LI R L S ++ I D + +I+ V + Q+ G W+AP
Sbjct: 123 GXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXADV-KFSFQSPG---RXYAPAWVAP 177
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 120 GLENFDEWTIDLRKL-NMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXX 176
G EN ++D +L + +G+FG++++G N + VAIKI+ D E+A
Sbjct: 14 GTENLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII-----DLEEAEDE 68
Query: 177 XXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
L+ P + ++ G+ K I+ EY GGS L +
Sbjct: 69 IEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIAT 128
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-GMTPET 295
+++ L +G+ Y+H IHRD+K+ N+L+ +K+ADFGVA T+
Sbjct: 129 ILREIL---KGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV 185
Query: 296 GTYRWMAP 303
GT WMAP
Sbjct: 186 GTPFWMAP 193
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GA+G+ L + G E AIKI+++ L L HPNI++
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKS---SVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYVHRLGLIHR 259
+ +V E +GG + + RQ S V + +KQ L G Y+H+ ++HR
Sbjct: 72 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKHNIVHR 128
Query: 260 DLKSDNLLIFS---DKSIKIADFGV-ARIEVQTEGMTPETGTYRWMAP 303
DLK +NLL+ S D IKI DFG+ A EV + M GT ++AP
Sbjct: 129 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERLGTAYYIAP 175
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 143 GAFGKLYRGTYNGE----EVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
G FG + +G Y +VAIK+L++ EKA + L +P IVR
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQ---GTEKADTEEMMREAQI--MHQLDNPYIVRL 75
Query: 199 IGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIH 258
IG C+ + +V E A GG + +FL ++ +P+ + V+ GM Y+ +H
Sbjct: 76 IGVCQAEAL-MLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 259 RDLKSDNLLIFSDKSIKIADFGVAR 283
RDL + N+L+ + KI+DFG+++
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSK 158
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPE--NDPEKAXXXXXXXXXXX 184
+ L + + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 66
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ +L H N++R G P + +VTE A GS+ L K Q + L + A+ V
Sbjct: 67 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 124
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
A GM Y+ IHRDL + NLL+ + +KI DFG+ R
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 163
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 138 DAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNI 195
+ +G+FG++++G N + VAIKI+ D E+A L+ P +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKII-----DLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 196 VRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
++ G+ K I+ EY GGS L + +++ L +G+ Y+H
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEK 139
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 303
IHRD+K+ N+L+ +K+ADFGVA T+ GT WMAP
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 188
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPE--NDPEKAXXXXXXXXXXX 184
+ L + + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ +L H N++R G P + +VTE A GS+ L K Q + L + A+ V
Sbjct: 73 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 130
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
A GM Y+ IHRDL + NLL+ + +KI DFG+ R Q +
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 85
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ L H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 86 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPE--NDPEKAXXXXXXXXXXX 184
+ L + + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ +L H N++R G P + +VTE A GS+ L K Q + L + A+ V
Sbjct: 73 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 130
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
A GM Y+ IHRDL + NLL+ + +KI DFG+ R Q +
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 175
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPE--NDPEKAXXXXXXXXXXX 184
+ L + + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 12 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 66
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ +L H N++R G P + +VTE A GS+ L K Q + L + A+ V
Sbjct: 67 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 124
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
A GM Y+ IHRDL + NLL+ + +KI DFG+ R Q +
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 169
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 15/195 (7%)
Query: 115 NSPTEGLENFDEWTIDLRKLNMGDAF---AQGAFGKLYRGTY--NGEEVAIKILERPEND 169
N P L+ DE ++ + + D +G++G +Y+ + G+ VAIK + E+D
Sbjct: 9 NPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV-ESD 67
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
++ + P++V++ G+ K IV EY GSV + R N
Sbjct: 68 LQEIIKEISI-------MQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLR-N 119
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQT 288
+++ +G+ Y+H + IHRD+K+ N+L+ ++ K+ADFGVA ++
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXM 179
Query: 289 EGMTPETGTYRWMAP 303
GT WMAP
Sbjct: 180 AKRNXVIGTPFWMAP 194
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 25/196 (12%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRG-TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL 187
I R + + +GAFGK++ +N K+L + E + L
Sbjct: 9 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 68
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS---------VPLKLAV 238
L+H +IVRF G C + +V EY + G + +FL + P L +
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 128
Query: 239 KQAL----DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-------IEVQ 287
Q L VA GM Y+ L +HRDL + N L+ +KI DFG++R V
Sbjct: 129 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 188
Query: 288 TEGMTPETGTYRWMAP 303
M P RWM P
Sbjct: 189 GRTMLP----IRWMPP 200
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 99
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ L H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 14/165 (8%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPE--NDPEKAXXXXXXXXXXX 184
+ L + + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 62
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ +L H N++R G P + +VTE A GS+ L K Q + L + A+ V
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 120
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
A GM Y+ IHRDL + NLL+ + +KI DFG+ R Q +
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND 165
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 138 DAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNI 195
+ +G+FG++++G N + VAIKI+ D E+A L+ P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII-----DLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 196 VRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
++ G+ K I+ EY GGS L + +++ L +G+ Y+H
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEK 124
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 303
IHRD+K+ N+L+ +K+ADFGVA T+ GT WMAP
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 173
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPE--NDPEKAXXXXXXXXXXX 184
+ L + + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 62
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ +L H N++R G P + +VTE A GS+ L K Q + L + A+ V
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 120
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
A GM Y+ IHRDL + NLL+ + +KI DFG+ R
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 138 DAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNI 195
+ +G+FG++++G N + VAIKI+ D E+A L+ P +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKII-----DLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 196 VRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
++ G+ K I+ EY GGS L + +++ L +G+ Y+H
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL---KGLDYLHSEK 124
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 303
IHRD+K+ N+L+ +K+ADFGVA T+ GT WMAP
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAP 173
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
+ GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 22 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
+ GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 85
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 86 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 143 GAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FG +L R + E VA+K +ER E +L+HPNIVRF
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGEK-------IAANVKREIINHRSLRHPNIVRFKE 82
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
P IV EYA GG + + + S Q L G++Y H + + HRD
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVSYCHAMQVCHRD 140
Query: 261 LKSDNLLIFSDKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
LK +N L+ + +KI DFG ++ V GT ++AP
Sbjct: 141 LKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 185
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 81/171 (47%), Gaps = 12/171 (7%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G+FG+ L + G+E A+K++ + + K L L HPNI
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQV---KQKTDKESLLREVQLLKQLDHPNIX 89
Query: 197 RFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
+ + +V E GG + + +++++ V ++Q L G+ Y H+
Sbjct: 90 KLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL---SGITYXHKNK 146
Query: 256 LIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
++HRDLK +NLL+ S D +I+I DFG++ ++ + GT ++AP
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAP 197
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILERPE--NDPEKAXXXXXXXXXXX 184
+ L + + G+FG + RG ++ VA+K L +P+ + PE
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL-KPDVLSQPE----AMDDFIREV 62
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
+ +L H N++R G P + +VTE A GS+ L K Q + L + A+ V
Sbjct: 63 NAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQGHFL-LGTLSRYAVQV 120
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
A GM Y+ IHRDL + NLL+ + +KI DFG+ R
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 25/196 (12%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRG-TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL 187
I R + + +GAFGK++ +N K+L + E + L
Sbjct: 15 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELL 74
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS---------VPLKLAV 238
L+H +IVRF G C + +V EY + G + +FL + P L +
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 134
Query: 239 KQAL----DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-------IEVQ 287
Q L VA GM Y+ L +HRDL + N L+ +KI DFG++R V
Sbjct: 135 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 194
Query: 288 TEGMTPETGTYRWMAP 303
M P RWM P
Sbjct: 195 GRTMLP----IRWMPP 206
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G+FGK L T G++VA+KI+ + L L+HP+I+
Sbjct: 21 TLGEGSFGKVKLAYHTTTGQKVALKIINK---KVLAKSDMQGRIEREISYLRLLRHPHII 77
Query: 197 RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGL 256
+ + +V EYA G + ++ +R S + A + + + Y HR +
Sbjct: 78 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCHRHKI 134
Query: 257 IHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+HRDLK +NLL+ ++KIADFG++ I + G+ + AP
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 181
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 103
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 104 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 161
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 162 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 191
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G+FGK L T G++VA+KI+ + L L+HP+I+
Sbjct: 20 TLGEGSFGKVKLAYHTTTGQKVALKIINK---KVLAKSDMQGRIEREISYLRLLRHPHII 76
Query: 197 RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGL 256
+ + +V EYA G + ++ +R S + A + + + Y HR +
Sbjct: 77 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCHRHKI 133
Query: 257 IHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+HRDLK +NLL+ ++KIADFG++ I + G+ + AP
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 180
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 28 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 84
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 85 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 142
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 172
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+WT++ ++G +G FG +Y R + +A+K+L + + EKA
Sbjct: 8 QWTLE--DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQL--EKAGVEHQLRREV 63
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 64 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE--QRTATYITE 120
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+A ++Y H +IHRD+K +NLL+ S+ +KIADFG
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 102
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 162
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEVQTEGMTPETG 296
VAR G Y+ IHRD+ + N L+ + KI DFG+AR ++ G + G
Sbjct: 163 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-DIYRAGYYRKGG 221
Query: 297 T----YRWMAP 303
+WM P
Sbjct: 222 CAMLPVKWMPP 232
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 81
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 82 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL-AVKQALDVAR 246
+ L H NIV I + + +V EY +G ++ +++ SV + Q LD
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILD--- 122
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI--EVQTEGMTPETGTYRWMAP 303
G+ + H + ++HRD+K N+LI S+K++KI DFG+A+ E GT ++ +P
Sbjct: 123 GIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 25/191 (13%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 125
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 185
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEVQTEGMTPETG 296
VAR G Y+ IHRD+ + N L+ + KI DFG+AR ++ G + G
Sbjct: 186 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-DIYRAGYYRKGG 244
Query: 297 T----YRWMAP 303
+WM P
Sbjct: 245 CAMLPVKWMPP 255
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---EEVAIKILERPENDPEKAXXXXXXXXXX 183
W+I+ + + GA + + Y E+VAIK + + EK
Sbjct: 10 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRI-----NLEKCQTSMDELLKE 63
Query: 184 XXXLATLKHPNIVRFIGA-CRKPMVWCIVTEYAKGGSV----RQFLTKRQNRSVPLKLAV 238
++ HPNIV + + K +W +V + GGSV + + K +++S L +
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 239 KQAL--DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE-- 294
+ +V G+ Y+H+ G IHRD+K+ N+L+ D S++IADFGV+ +T
Sbjct: 123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 295 ----TGTYRWMAP 303
GT WMAP
Sbjct: 183 RKTFVGTPCWMAP 195
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 81
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 82 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
R L +G FGK+ Y+ GE VA+K L+ ++
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI---- 64
Query: 186 XLATLKHPNIVRFIGACR----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQA 241
L TL H +IV++ G C K + +V EY GS+R +L + L L +Q
Sbjct: 65 -LRTLYHEHIVKYKGCCEDQGEKSVQ--LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ- 120
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ GMAY+H IHR L + N+L+ +D+ +KI DFG+A+
Sbjct: 121 --ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 81
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 82 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
R L +G FGK+ Y+ GE VA+K L+ ++
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEI---- 63
Query: 186 XLATLKHPNIVRFIGACR----KPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQA 241
L TL H +IV++ G C K + +V EY GS+R +L + L L +Q
Sbjct: 64 -LRTLYHEHIVKYKGCCEDQGEKSVQ--LVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ- 119
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ GMAY+H IHR L + N+L+ +D+ +KI DFG+A+
Sbjct: 120 --ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G+FGK L T G++VA+KI+ + L L+HP+I+
Sbjct: 15 TLGEGSFGKVKLAYHTTTGQKVALKIINK---KVLAKSDMQGRIEREISYLRLLRHPHII 71
Query: 197 RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGL 256
+ + +V EYA G + ++ +R S + A + + + Y HR +
Sbjct: 72 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCHRHKI 128
Query: 257 IHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+HRDLK +NLL+ ++KIADFG++ I + G+ + AP
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 175
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 85
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 86 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 16 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 72
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 73 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 160
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G+FGK L T G++VA+KI+ + L L+HP+I+
Sbjct: 11 TLGEGSFGKVKLAYHTTTGQKVALKIINK---KVLAKSDMQGRIEREISYLRLLRHPHII 67
Query: 197 RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGL 256
+ + +V EYA G + ++ +R S + A + + + Y HR +
Sbjct: 68 KLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSE--QEARRFFQQIISAVEYCHRHKI 124
Query: 257 IHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+HRDLK +NLL+ ++KIADFG++ I + G+ + AP
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 171
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRGTYNG---EEVAIKILERPENDPEKAXXXXXXXXXX 183
W+I+ + + GA + + Y E+VAIK + + EK
Sbjct: 5 WSINRDDYELQEVIGSGATA-VVQAAYCAPKKEKVAIKRI-----NLEKCQTSMDELLKE 58
Query: 184 XXXLATLKHPNIVRFIGA-CRKPMVWCIVTEYAKGGSV----RQFLTKRQNRSVPLKLAV 238
++ HPNIV + + K +W +V + GGSV + + K +++S L +
Sbjct: 59 IQAMSQCHHPNIVSYYTSFVVKDELW-LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 239 KQAL--DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE-- 294
+ +V G+ Y+H+ G IHRD+K+ N+L+ D S++IADFGV+ +T
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 295 ----TGTYRWMAP 303
GT WMAP
Sbjct: 178 RKTFVGTPCWMAP 190
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GA+G+ L + G E AIKI+++ L L HPNI++
Sbjct: 32 GAYGEVLLCKDKLTGAERAIKIIKKSSVT---TTSNSGALLDEVAVLKQLDHPNIMKLYE 88
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYVHRLGLIHR 259
+ +V E +GG + + RQ S V + +KQ L G Y+H+ ++HR
Sbjct: 89 FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS---GTTYLHKHNIVHR 145
Query: 260 DLKSDNLLIFS---DKSIKIADFGV-ARIEVQTEGMTPETGTYRWMAP 303
DLK +NLL+ S D IKI DFG+ A EV + M GT ++AP
Sbjct: 146 DLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK-MKERLGTAYYIAP 192
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 32 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 88
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 89 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 176
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN--RSVPLKLAVKQALDV 244
L L HPNIV I +V E+ + +++ L + + + +K+ + Q L
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL-- 129
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
RG+A+ H+ ++HRDLK NLLI SD ++K+ADFG+AR + T E T + AP
Sbjct: 130 -RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN--RSVPLKLAVKQALDV 244
L L HPNIV I +V E+ + +++ L + + + +K+ + Q L
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLL-- 129
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
RG+A+ H+ ++HRDLK NLLI SD ++K+ADFG+AR + T E T + AP
Sbjct: 130 -RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAP 188
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTV-QLITQLMPFGXLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 15/166 (9%)
Query: 143 GAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FG +L R E VA+K +ER E +L+HPNIVRF
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHR-------SLRHPNIVRFKE 83
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSV-PLKLAVKQALDVARGMAYVHRLGLIHR 259
P I+ EYA GG + + + S + +Q L G++Y H + + HR
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLS---GVSYCHSMQICHR 140
Query: 260 DLKSDNLLIFSDKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
DLK +N L+ + +KI DFG ++ V GT ++AP
Sbjct: 141 DLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAP 186
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 99
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 85
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 143 GAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FG +L R + E VA+K +ER E E +L+HPNIVRF
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR-------SLRHPNIVRFKE 82
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
P IV EYA GG + + + S Q L G++Y H + + HRD
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVSYCHAMQVCHRD 140
Query: 261 LKSDNLLIFSDKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
LK +N L+ + +KI FG ++ V GT ++AP
Sbjct: 141 LKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAP 185
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 14/176 (7%)
Query: 115 NSPTEGLENFDEWTIDLRKLNMGDA---FAQGAFGKLYRGTYNGE----EVAIKILERPE 167
SP E + + L++ N+ A G FG + +G Y +VAIK+L++
Sbjct: 316 ESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ-- 373
Query: 168 NDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR 227
EKA + L +P IVR IG C+ + +V E A GG + +FL +
Sbjct: 374 -GTEKADTEEMMREAQI--MHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGK 429
Query: 228 QNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ +P+ + V+ GM Y+ +HR+L + N+L+ + KI+DFG+++
Sbjct: 430 RE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSK 484
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 111
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 172 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 91
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 92 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 151
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 152 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 142 QGAFGKLYRGTY-----NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+G FG +Y G Y N + AIK L R + L HPN++
Sbjct: 31 KGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-----MQQVEAFLREGLLMRGLNHPNVL 85
Query: 197 RFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
IG P + ++ Y G + QF+ Q R+ +K + L VARGM Y+
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQK 144
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+HRDL + N ++ ++K+ADFG+AR
Sbjct: 145 FVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 143 GAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G FG +L R + E VA+K +ER E E +L+HPNIVRF
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHR-------SLRHPNIVRFKE 82
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
P IV EYA GG + + + S Q L G++Y H + + HRD
Sbjct: 83 VILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL--ISGVSYCHAMQVCHRD 140
Query: 261 LKSDNLLIFSDKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
LK +N L+ + +KI FG ++ V GT ++AP
Sbjct: 141 LKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAP 185
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 101
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 161
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 162 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 84
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 76
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 77 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 136
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 137 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G++ E VA+KI+ D ++A A L H
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINAMLNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 19 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 75
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A GM Y+
Sbjct: 76 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAEGMNYLEDR 133
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 163
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVYSEQ---DELDFLMEA 99
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 31/193 (16%)
Query: 133 KLNMGDAFAQGAFGKLYRG----TYNGE---EVAIKILERPENDPEKAXXXXXXXXXXXX 185
K+ + QG+FG +Y G GE VA+K + + E+
Sbjct: 17 KITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF 76
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ-------NRSVP-LKLA 237
T H +VR +G K +V E G ++ +L + R P L+
Sbjct: 77 ---TCHH--VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 238 VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE-------G 290
++ A ++A GMAY++ +HRDL + N ++ D ++KI DFG+ R +T+ G
Sbjct: 132 IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKG 191
Query: 291 MTPETGTYRWMAP 303
+ P RWMAP
Sbjct: 192 LLP----VRWMAP 200
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 187 LATLKHPNIVRFIGAC--RKPMVWCIVTEYAKGGSVRQFLTK----RQNRSVPLKLAVKQ 240
L LKHPNIVR+ R IV EY +GG + +TK RQ L V
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 241 ALDVARGMAYVHRLG-----LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE- 294
L +A + HR ++HRDLK N+ + +++K+ DFG+ARI E E
Sbjct: 119 QLTLA--LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF 176
Query: 295 TGTYRWMAP 303
GT +M+P
Sbjct: 177 VGTPYYMSP 185
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 84
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+AR
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV------RQFLTKRQNRSVPLKLAVKQ 240
L L HPNI++ P +V E GG + + + ++R AVKQ
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAAD-----AVKQ 156
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGT 297
L+ +AY+H G++HRDLK +NLL + D +KIADFG+++I M GT
Sbjct: 157 ILE---AVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGT 213
Query: 298 YRWMAP 303
+ AP
Sbjct: 214 PGYCAP 219
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPEND 169
M+S LE+F+ +G +G FG +Y R + +A+K+L + +
Sbjct: 1 MESKKRQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL- 49
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
EKA + L+HPNI+R G ++ EYA G+V + L K
Sbjct: 50 -EKAGVEHQLRREVEIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ ++A ++Y H +IHRD+K +NLL+ S +KIADFG + + +
Sbjct: 108 FDE--QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS 164
Query: 290 GMTPETGTYRWMAP 303
T GT ++ P
Sbjct: 165 RRTTLCGTLDYLPP 178
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPEND 169
M+S LE+F+ +G +G FG +Y R + +A+K+L + +
Sbjct: 3 MESKKRQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL- 51
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
EKA + L+HPNI+R G ++ EYA G+V + L K
Sbjct: 52 -EKAGVEHQLRREVEIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 109
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ ++A ++Y H +IHRD+K +NLL+ S +KIADFG + + +
Sbjct: 110 FDE--QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS 166
Query: 290 GMTPETGTYRWMAP 303
T GT ++ P
Sbjct: 167 RRTTLCGTLDYLPP 180
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 18/194 (9%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPEND 169
M+S LE+F+ +G +G FG +Y R + +A+K+L + +
Sbjct: 3 MESKKRQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL- 51
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
EKA + L+HPNI+R G ++ EYA G V + L K
Sbjct: 52 -EKAGVEHQLRREVEIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK 109
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ ++A ++Y H +IHRD+K +NLL+ S +KIADFG + + +
Sbjct: 110 --FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS 166
Query: 290 GMTPETGTYRWMAP 303
T GT ++ P
Sbjct: 167 RRTTLCGTLDYLPP 180
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQAL--DV 244
L +L HPNI++ IV E +GG + + + Q R L L +
Sbjct: 74 LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKS----IKIADFGVARIEVQTEGMTPETGTYRW 300
+AY H ++H+DLK +N+L F D S IKI DFG+A + E T GT +
Sbjct: 134 MNALAYFHSQHVVHKDLKPENIL-FQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALY 192
Query: 301 MAP 303
MAP
Sbjct: 193 MAP 195
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 9 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 64
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 65 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 121
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 180
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPEND 169
M+S LE+F+ +G +G FG +Y R + +A+K+L + +
Sbjct: 1 MESKKRQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL- 49
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
EKA + L+HPNI+R G ++ EYA G+V + L K
Sbjct: 50 -EKAGVEHQLRREVEIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ ++A ++Y H +IHRD+K +NLL+ S +KIADFG + + +
Sbjct: 108 FDE--QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSS 164
Query: 290 GMTPETGTYRWMAP 303
T GT ++ P
Sbjct: 165 RRTTLCGTLDYLPP 178
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 30 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 85
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 86 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 142
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 201
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 142 QGAFGKLYRGTYNGEEV--AIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G+FGK+ + EEV A+K+L++ K L +KHP +V
Sbjct: 48 KGSFGKVLLARHKAEEVFYAVKVLQK--KAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
+ + V +Y GG + F ++ R A A ++A + Y+H L +++R
Sbjct: 106 FSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 163
Query: 260 DLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 303
DLK +N+L+ S I + DFG+ + ++ T GT ++AP
Sbjct: 164 DLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 116
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 175
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 116
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTLDYLPP 175
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 9 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 64
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 65 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 121
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 122 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPP 180
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 21 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 76
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 77 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 133
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 134 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 192
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 8 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 63
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 64 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 120
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 179
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
+ GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 29 VLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 85
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 86 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 173
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 29 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 85
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 86 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG A++
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 173
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++T+ G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 166
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 5 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 60
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 61 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 117
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPP 176
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 116
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTLDYLPP 175
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 3 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 58
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 59 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 115
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 116 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 174
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 12/186 (6%)
Query: 123 NFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXX 182
NFDE I + G+ +G FG +Y+G N VA+K L + +
Sbjct: 17 NFDERPISVG----GNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEI 72
Query: 183 XXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLK--LAVKQ 240
A +H N+V +G C+V Y GS+ L+ + + PL K
Sbjct: 73 KVX--AKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCL-DGTPPLSWHXRCKI 129
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIE---VQTEGMTPETGT 297
A A G+ ++H IHRD+KS N+L+ + KI+DFG+AR Q + GT
Sbjct: 130 AQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGT 189
Query: 298 YRWMAP 303
+ AP
Sbjct: 190 TAYXAP 195
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 25 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 81
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 82 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 169
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 116
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPP 175
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 83/186 (44%), Gaps = 17/186 (9%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYN--GEE---VAIKILERPENDPEKAXXXXXXXXXX 183
ID+ + + G FG++ G G+ VAIK L+ + ++
Sbjct: 4 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQR-----RDFLSE 58
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ HPN++ G K I+TE+ + GS+ FL + + ++L V
Sbjct: 59 ASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQL-VGMLRG 117
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETG-----T 297
+A GM Y+ + +HR L + N+L+ S+ K++DFG++R +E T T +
Sbjct: 118 IAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 177
Query: 298 YRWMAP 303
RW AP
Sbjct: 178 IRWTAP 183
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 116
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDYLPP 175
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 142 QGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G+FG++++G N + VAIKI+ D E+A L+ + ++
Sbjct: 33 KGSFGEVFKGIDNRTQQVVAIKII-----DLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
G+ K I+ EY GGS L + +K+ L +G+ Y+H IHR
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSEKKIHR 144
Query: 260 DLKSDNLLIFSDKSIKIADFGVARIEVQTE-GMTPETGTYRWMAP 303
D+K+ N+L+ +K+ADFGVA T+ GT WMAP
Sbjct: 145 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAP 189
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 168
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 82
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 83 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 170
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 5 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 60
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 61 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 117
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + T +GT ++ P
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDYLPP 176
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 79
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 80 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R +A+K+L + + EKA
Sbjct: 1 QWALE--DFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQL--EKAGVEHQLRREV 56
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 57 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 113
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIADFG + + + T GT ++ P
Sbjct: 114 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPP 172
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 22 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 78
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 79 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 188 ATLKHPNIVRF--IGACRKPM--VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
A L HP IV G P + IV EY G ++R + + P K A++ D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTP-KRAIEVIAD 124
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET----GTYR 299
+ + + H+ G+IHRD+K N+LI + ++K+ DFG+AR + +T GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQ 184
Query: 300 WMAP 303
+++P
Sbjct: 185 YLSP 188
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 20/167 (11%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGE-------EVAIKILERPENDPEKAXXXXXXXXXXX 184
+ + + GAFG++Y G +G +VA+K L PE E+
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL--PEVCSEQ---DELDFLMEA 85
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ H NIVR IG + + I+ E GG ++ FL + + R S P LA+ L
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 244 VAR----GMAYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVAR 283
VAR G Y+ IHRD+ + N L+ + KI DFG+A+
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+A P +V+ A + +V EY GG + ++ N VP K A +V
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVL 184
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT---PETGTYRWMAP 303
+ +H +G IHRD+K DN+L+ +K+ADFG +++ EGM GT +++P
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISP 243
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 23 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 79
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 80 VCRLLGICLTSTV-QLIMQLMPFGXLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG+A++
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKL 167
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+A P +V+ A + +V EY GG + ++ N VP K A +V
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVL 179
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT---PETGTYRWMAP 303
+ +H +G IHRD+K DN+L+ +K+ADFG +++ EGM GT +++P
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISP 238
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPEND 169
M+S LE+F+ +G +G FG +Y R + +A+K+L + +
Sbjct: 3 MESKKRQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL- 51
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
EKA + L+HPNI+R G ++ EYA G V + L K
Sbjct: 52 -EKAGVEHQLRREVEIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK 109
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+ ++A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 110 FDE--QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G++ E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L R G A+KIL + + A L +HP +
Sbjct: 18 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 74
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
A + C V EYA GG + F + R + A ++ + Y+H +++R
Sbjct: 75 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 132
Query: 260 DLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 303
D+K +NL++ D IKI DFG+ + E ++G T +T GT ++AP
Sbjct: 133 DIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 177
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+G+ HRD+K +NLL+ ++KI+DFG+A +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 62
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 135 NMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G++ E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+G+ HRD+K +NLL+ ++KI+DFG+A +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+A P +V+ A + +V EY GG + ++ N VP K A +V
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS---NYDVPEKWARFYTAEVVL 184
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT---PETGTYRWMAP 303
+ +H +G IHRD+K DN+L+ +K+ADFG +++ EGM GT +++P
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTPDYISP 243
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L R G A+KIL + + A L +HP +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
A + C V EYA GG + F + R + A ++ + Y+H +++R
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 260 DLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 303
D+K +NL++ D IKI DFG+ + E ++G T +T GT ++AP
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 174
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEIXINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+G+ HRD+K +NLL+ ++KI+DFG+A +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV------RQFLTKRQNRSVPLKLAVKQ 240
L +KHPNIV ++ + GG + + F T+R + + Q
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGT 297
LD + Y+H LG++HRDLK +NLL +S D I I+DFG++++E ++ GT
Sbjct: 125 VLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 298 YRWMAP 303
++AP
Sbjct: 182 PGYVAP 187
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L R G A+KIL + + A L +HP +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
A + C V EYA GG + F + R + A ++ + Y+H +++R
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 260 DLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 303
D+K +NL++ D IKI DFG+ + E ++G T +T GT ++AP
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFCGTPEYLAP 174
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEIXINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 30 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 85
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 86 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 142
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 143 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPEND 169
M+S LE+F+ +G +G FG +Y R + +A+K+L + +
Sbjct: 1 MESKKRQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL- 49
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
EKA + L+HPNI+R G ++ EYA G+V + L K
Sbjct: 50 -EKAGVEHQLRREVEIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+ ++A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 108 FDE--QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G++ E VA+KI+ D ++A L H
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 7 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 62
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 63 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 119
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+G+ HRD+K +NLL+ ++KI+DFG+A +
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV 153
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G++ E VA+KI+ D ++A L H
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV------RQFLTKRQNRSVPLKLAVKQ 240
L +KHPNIV ++ + GG + + F T+R + + Q
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGT 297
LD + Y+H LG++HRDLK +NLL +S D I I+DFG++++E ++ GT
Sbjct: 125 VLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 298 YRWMAP 303
++AP
Sbjct: 182 PGYVAP 187
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 7 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 62
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 63 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 119
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 120 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 9/152 (5%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA+G +L E VA+KI+ D ++A L H
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEIXINKMLNH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+G+ HRD+K +NLL+ ++KI+DFG+A +
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV 154
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 111 LMDSNSPTEGL-ENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE-----VAIKILE 164
++DS ++ L E ++ I ++ +G +G FG + E+ VA+K+L+
Sbjct: 1 MLDSLGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK 60
Query: 165 R---PENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRK---------PMVWCIVT 212
+D E+ + HP++ + +G + PMV +
Sbjct: 61 ADIIASSDIEE-------FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMV---IL 110
Query: 213 EYAKGGSVRQFLTKRQ----NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLI 268
+ K G + FL + ++PL+ V+ +D+A GM Y+ IHRDL + N ++
Sbjct: 111 PFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML 170
Query: 269 FSDKSIKIADFGVAR 283
D ++ +ADFG++R
Sbjct: 171 AEDMTVCVADFGLSR 185
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 18/194 (9%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPEND 169
M+S LE+F+ +G +G FG +Y R + +A+K+L + +
Sbjct: 1 MESKKRQWALEDFE----------IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL- 49
Query: 170 PEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN 229
EKA + L+HPNI+R G ++ EYA G+V + L K
Sbjct: 50 -EKAGVEHQLRREVEIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
+ ++A ++Y H +IHRD+K +NLL+ S +KIA+FG + + +
Sbjct: 108 FDE--QRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSS 164
Query: 290 GMTPETGTYRWMAP 303
T GT ++ P
Sbjct: 165 RRTTLCGTLDYLPP 178
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 27/189 (14%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
+++ M +G +G+++ G + GE+VA+K+ E ++
Sbjct: 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEE-------ASWFRETEIYQTVLMR 89
Query: 192 HPNIVRFIGACRKPM-VWC---IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
H NI+ FI A K W ++T+Y + GS+ +L ++ ++ K +K A G
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL---KSTTLDAKSMLKLAYSSVSG 146
Query: 248 MAYVH--------RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG---MTPET- 295
+ ++H + + HRDLKS N+L+ + + IAD G+A + + P T
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 296 -GTYRWMAP 303
GT R+M P
Sbjct: 207 VGTKRYMPP 215
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 187 LATLKHPNIVRFIGACRKPMV--WCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQA--- 241
L L HPN+V+ + P +V E G V + T + L+ QA
Sbjct: 90 LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-------PLSEDQARFY 142
Query: 242 -LDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET-GTYR 299
D+ +G+ Y+H +IHRD+K NLL+ D IKIADFGV+ ++ + T GT
Sbjct: 143 FQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPA 202
Query: 300 WMAP 303
+MAP
Sbjct: 203 FMAP 206
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNGEE--VAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 116
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 117 LANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 116
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV------RQFLTKRQNRSVPLKLAVKQ 240
L +KHPNIV ++ + GG + + F T+R + + Q
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGT 297
LD + Y+H LG++HRDLK +NLL +S D I I+DFG++++E ++ GT
Sbjct: 125 VLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 298 YRWMAP 303
++AP
Sbjct: 182 PGYVAP 187
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L ++ + +P ++ K ++ V RG+AY+
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ + + + GT +MAP
Sbjct: 132 EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMAP 182
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 6 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 61
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 62 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 118
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 5 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 60
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 61 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 117
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR---QNRSVPLKLAVKQALD 243
LA + HP +V+ A + ++ ++ +GG + L+K V LA +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-----E 138
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE-TGTYRWMA 302
+A G+ ++H LG+I+RDLK +N+L+ + IK+ DFG+++ + E GT +MA
Sbjct: 139 LALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMA 198
Query: 303 P 303
P
Sbjct: 199 P 199
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 188 ATLKHPNIVRF--IGACRKPM--VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
A L HP IV G P + IV EY G ++R + + P K A++ D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTP-KRAIEVIAD 124
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET----GTYR 299
+ + + H+ G+IHRD+K N++I + ++K+ DFG+AR + +T GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 300 WMAP 303
+++P
Sbjct: 185 YLSP 188
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 4 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 59
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 60 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 116
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+A ++Y H +IHRD+K +NLL+ S +KIADFG
Sbjct: 117 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 188 ATLKHPNIVRF--IGACRKPM--VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
A L HP IV G P + IV EY G ++R + + P K A++ D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTP-KRAIEVIAD 124
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET----GTYR 299
+ + + H+ G+IHRD+K N++I + ++K+ DFG+AR + +T GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 300 WMAP 303
+++P
Sbjct: 185 YLSP 188
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 10/180 (5%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+W ++ +G +G FG +Y R + +A+K+L + + EKA
Sbjct: 6 QWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQL--EKAGVEHQLRREV 61
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ L+HPNI+R G ++ EYA G+V + L K + +
Sbjct: 62 EIQ-SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTATYITE 118
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+A ++Y H +IHRD+K +NLL+ S +KIA+FG + + + T GT ++ P
Sbjct: 119 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDYLPP 177
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 188 ATLKHPNIVRF--IGACRKPM--VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
A L HP IV G P + IV EY G ++R + + P K A++ D
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTP-KRAIEVIAD 124
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET----GTYR 299
+ + + H+ G+IHRD+K N++I + ++K+ DFG+AR + +T GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 300 WMAP 303
+++P
Sbjct: 185 YLSP 188
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+A P +V+ A + +V EY GG + ++ N VP K A +V
Sbjct: 129 MAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMS---NYDVPEKWAKFYTAEVVL 185
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT---PETGTYRWMAP 303
+ +H +GLIHRD+K DN+L+ +K+ADFG +++ GM GT +++P
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGMVHCDTAVGTPDYISP 244
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV------RQFLTKRQNRSVPLKLAVKQ 240
L +KHPNIV ++ + GG + + F T+R + + Q
Sbjct: 70 LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL-----IFQ 124
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGT 297
LD + Y+H LG++HRDLK +NLL +S D I I+DFG++++E ++ GT
Sbjct: 125 VLDAVK---YLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT 181
Query: 298 YRWMAP 303
++AP
Sbjct: 182 PGYVAP 187
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 138 DAFAQGAFGKLYRGTYNGEE--VAIKI--LERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
D +G + +Y+G + VA+K LE E P A L LKH
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSL-------LKDLKHA 60
Query: 194 NIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN--RSVPLKLAVKQALDVARGMAYV 251
NIV +V EY ++Q+L N +KL + Q L RG+AY
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLL---RGLAYC 116
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIE-VQTEGMTPETGTYRWMAP 303
HR ++HRDLK NLLI +K+ADFG+AR + + T+ E T + P
Sbjct: 117 HRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPP 169
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 188 ATLKHPNIVRF--IGACRKPM--VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
A L HP IV G P + IV EY G ++R + + P K A++ D
Sbjct: 67 AALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTP-KRAIEVIAD 124
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET----GTYR 299
+ + + H+ G+IHRD+K N++I + ++K+ DFG+AR + +T GT +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 184
Query: 300 WMAP 303
+++P
Sbjct: 185 YLSP 188
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 142 QGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
QG FG++++ + G++VA+K + EN+ E L LKH N+V I
Sbjct: 28 QGTFGEVFKARHRKTGQKVALKKVLM-ENEKE---GFPITALREIKILQLLKHENVVNLI 83
Query: 200 GACR---KPMVWCIVTEYAKGGSVRQFLT-KRQNRSVPLKLA-VKQALD-VARGMAYVHR 253
CR P C + Y L N V L+ +K+ + + G+ Y+HR
Sbjct: 84 EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 143
Query: 254 LGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++HRD+K+ N+LI D +K+ADFG+AR
Sbjct: 144 NKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 24 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 80
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 81 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG A++
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 168
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 188 ATLKHPNIVRF--IGACRKPM--VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
A L HP IV G P + IV EY G ++R + + P K A++ D
Sbjct: 84 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGPMTP-KRAIEVIAD 141
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET----GTYR 299
+ + + H+ G+IHRD+K N++I + ++K+ DFG+AR + +T GT +
Sbjct: 142 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 201
Query: 300 WMAP 303
+++P
Sbjct: 202 YLSP 205
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 22/155 (14%)
Query: 142 QGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
QG FG++++ + G++VA+K + EN+ E L LKH N+V I
Sbjct: 28 QGTFGEVFKARHRKTGQKVALKKVLM-ENEKE---GFPITALREIKILQLLKHENVVNLI 83
Query: 200 GACR---KPMVWC-----IVTEYAK---GGSVRQFLTKRQNRSVPLKLAVKQALDVARGM 248
CR P C +V ++ + G + L K + K ++ L+ G+
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLN---GL 138
Query: 249 AYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Y+HR ++HRD+K+ N+LI D +K+ADFG+AR
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 16/126 (12%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK--QALDV 244
++ L HPNIV+ G P +V E+ G + L +++ P+K +VK LD+
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDI 131
Query: 245 ARGMAYVHRLG--LIHRDLKSDNLLIFS-----DKSIKIADFGVARIEVQTEGMTPETGT 297
A G+ Y+ ++HRDL+S N+ + S K+ADFG+++ V + ++ G
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS--VSGLLGN 189
Query: 298 YRWMAP 303
++WMAP
Sbjct: 190 FQWMAP 195
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 9/150 (6%)
Query: 139 AFAQGAFGKLYRGTY--NGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHPN 194
GAFG +Y+G + GE+V I I E E KA +A++ +P+
Sbjct: 26 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYV---MASVDNPH 82
Query: 195 IVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+ R +G C V ++ + G + ++ + ++ ++ + + + +A+GM Y+
Sbjct: 83 VCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
L+HRDL + N+L+ + + +KI DFG A++
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKL 170
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 207 VWCIVTEYAKGGSVRQFLT-KRQNRS--VPLKLAVKQALDVARGMAYVHRLGLIHRDLKS 263
+W +V E+ +GG++ +T R N + LAV QAL V +H G+IHRD+KS
Sbjct: 96 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 148
Query: 264 DNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
D++L+ D +K++DFG A++ + GT WMAP
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 189
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 207 VWCIVTEYAKGGSVRQFLT-KRQNRS--VPLKLAVKQALDVARGMAYVHRLGLIHRDLKS 263
+W +V E+ +GG++ +T R N + LAV QAL V +H G+IHRD+KS
Sbjct: 223 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 275
Query: 264 DNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
D++L+ D +K++DFG A++ + GT WMAP
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 316
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 207 VWCIVTEYAKGGSVRQFLT-KRQNRS--VPLKLAVKQALDVARGMAYVHRLGLIHRDLKS 263
+W +V E+ +GG++ +T R N + LAV QAL V +H G+IHRD+KS
Sbjct: 146 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 198
Query: 264 DNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
D++L+ D +K++DFG A++ + GT WMAP
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 239
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 22/155 (14%)
Query: 142 QGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
QG FG++++ + G++VA+K + EN+ E L LKH N+V I
Sbjct: 28 QGTFGEVFKARHRKTGQKVALKKVLM-ENEKE---GFPITALREIKILQLLKHENVVNLI 83
Query: 200 GACR---KPMVWC-----IVTEYAK---GGSVRQFLTKRQNRSVPLKLAVKQALDVARGM 248
CR P C +V ++ + G + L K + K ++ L+ G+
Sbjct: 84 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLN---GL 138
Query: 249 AYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Y+HR ++HRD+K+ N+LI D +K+ADFG+AR
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 22/155 (14%)
Query: 142 QGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
QG FG++++ + G++VA+K + EN+ E L LKH N+V I
Sbjct: 27 QGTFGEVFKARHRKTGQKVALKKVLM-ENEKE---GFPITALREIKILQLLKHENVVNLI 82
Query: 200 GACR---KPMVWC-----IVTEYAK---GGSVRQFLTKRQNRSVPLKLAVKQALDVARGM 248
CR P C +V ++ + G + L K + K ++ L+ G+
Sbjct: 83 EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI--KRVMQMLLN---GL 137
Query: 249 AYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Y+HR ++HRD+K+ N+LI D +K+ADFG+AR
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 207 VWCIVTEYAKGGSVRQFLT-KRQNRS--VPLKLAVKQALDVARGMAYVHRLGLIHRDLKS 263
+W +V E+ +GG++ +T R N + LAV QAL V +H G+IHRD+KS
Sbjct: 103 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 155
Query: 264 DNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
D++L+ D +K++DFG A++ + GT WMAP
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 196
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 207 VWCIVTEYAKGGSVRQFLT-KRQNRS--VPLKLAVKQALDVARGMAYVHRLGLIHRDLKS 263
+W +V E+ +GG++ +T R N + LAV QAL V +H G+IHRD+KS
Sbjct: 92 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 144
Query: 264 DNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
D++L+ D +K++DFG A++ + GT WMAP
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 185
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTPE T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAP 194
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 11/101 (10%)
Query: 207 VWCIVTEYAKGGSVRQFLT-KRQNRS--VPLKLAVKQALDVARGMAYVHRLGLIHRDLKS 263
+W +V E+ +GG++ +T R N + LAV QAL V +H G+IHRD+KS
Sbjct: 101 LW-VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSV------LHAQGVIHRDIKS 153
Query: 264 DNLLIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
D++L+ D +K++DFG A++ + GT WMAP
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAP 194
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 16/126 (12%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK--QALDV 244
++ L HPNIV+ G P +V E+ G + L +++ P+K +VK LD+
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDI 131
Query: 245 ARGMAYVHRLG--LIHRDLKSDNLLIFS-----DKSIKIADFGVARIEVQTEGMTPETGT 297
A G+ Y+ ++HRDL+S N+ + S K+ADFG ++ V + ++ G
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHS--VSGLLGN 189
Query: 298 YRWMAP 303
++WMAP
Sbjct: 190 FQWMAP 195
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 29/187 (15%)
Query: 135 NMGDAFAQGAFGKLYRGTYN--GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
M + G FG + R + GE+VAIK R E P+ + L H
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKN----RERWCLEIQIMKKLNH 72
Query: 193 PNIV---------RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN----RSVPLKLAVK 239
PN+V + + P+ + EY +GG +R++L + +N + P++ +
Sbjct: 73 PNVVSAREVPDGLQKLAPNDLPL---LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSI---KIADFGVARIEVQTEGMTPETG 296
D++ + Y+H +IHRDLK +N+++ KI D G A+ Q E T G
Sbjct: 130 ---DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 186
Query: 297 TYRWMAP 303
T +++AP
Sbjct: 187 TLQYLAP 193
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 29/187 (15%)
Query: 135 NMGDAFAQGAFGKLYRGTYN--GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
M + G FG + R + GE+VAIK R E P+ + L H
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIKQC-RQELSPKN----RERWCLEIQIMKKLNH 71
Query: 193 PNIV---------RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN----RSVPLKLAVK 239
PN+V + + P+ + EY +GG +R++L + +N + P++ +
Sbjct: 72 PNVVSAREVPDGLQKLAPNDLPL---LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSI---KIADFGVARIEVQTEGMTPETG 296
D++ + Y+H +IHRDLK +N+++ KI D G A+ Q E T G
Sbjct: 129 ---DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVG 185
Query: 297 TYRWMAP 303
T +++AP
Sbjct: 186 TLQYLAP 192
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L R G A+KIL + + A L +HP +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
A + C V EYA GG + F + R + A ++ + Y+H +++R
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 260 DLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 303
D+K +NL++ D IKI DFG+ + E ++G T + GT ++AP
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L R G A+KIL + + A L +HP +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
A + C V EYA GG + F + R + A ++ + Y+H +++R
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 260 DLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 303
D+K +NL++ D IKI DFG+ + E ++G T + GT ++AP
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP +V + V EY GG + F +RQ R +P + A + +++ + Y+
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQ-RKLPEEHARFYSAEISLALNYL 169
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP------ETGTYRWMAP 303
H G+I+RDLK DN+L+ S+ IK+ D+G+ + EG+ P GT ++AP
Sbjct: 170 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRPGDTTSTFCGTPNYIAP 222
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L R G A+KIL + + A L +HP +
Sbjct: 20 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
A + C V EYA GG + F + R + A ++ + Y+H +++R
Sbjct: 77 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 134
Query: 260 DLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 303
D+K +NL++ D IKI DFG+ + E ++G T + GT ++AP
Sbjct: 135 DIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 179
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L R G A+KIL + + A L +HP +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRK---EVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHR 259
A + C V EYA GG + F + R + A ++ + Y+H +++R
Sbjct: 72 YAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 260 DLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 303
D+K +NL++ D IKI DFG+ + E ++G T + GT ++AP
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYLAP 174
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP +V + V EY GG + F +RQ R +P + A + +++ + Y+
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQ-RKLPEEHARFYSAEISLALNYL 137
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP------ETGTYRWMAP 303
H G+I+RDLK DN+L+ S+ IK+ D+G+ + EG+ P GT ++AP
Sbjct: 138 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRPGDTTSXFCGTPNYIAP 190
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP +V + V EY GG + F +RQ R +P + A + +++ + Y+
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQ-RKLPEEHARFYSAEISLALNYL 122
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP------ETGTYRWMAP 303
H G+I+RDLK DN+L+ S+ IK+ D+G+ + EG+ P GT ++AP
Sbjct: 123 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRPGDTTSXFCGTPNYIAP 175
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 135 NMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ +GA G +L E VA+KI+ D ++A L H
Sbjct: 9 DLVQTLGEGAAGEVQLAVNRVTEEAVAVKIV-----DMKRAVDCPENIKKEICINKMLNH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
N+V+F G R+ + + EY GG + F + +P A + + G+ Y+H
Sbjct: 64 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVA---RIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K +NLL+ ++KI+DFG+A R + + GT ++AP
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 135 NMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ + +GAF + R + G E A KI+ N + + L+H
Sbjct: 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKII----NTKKLSARDFQKLEREARICRKLQH 87
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYV 251
PNIVR + ++ +V + GG + + + R+ S ++Q L+ +AY
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SIAYC 144
Query: 252 HRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEV-QTEGMTPETGTYRWMAP 303
H G++HR+LK +NLL+ S ++K+ADFG+A IEV +E GT +++P
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSP 199
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP +V + V EY GG + F +RQ R +P + A + +++ + Y+
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL-MFHMQRQ-RKLPEEHARFYSAEISLALNYL 126
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP------ETGTYRWMAP 303
H G+I+RDLK DN+L+ S+ IK+ D+G+ + EG+ P GT ++AP
Sbjct: 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-----EGLRPGDTTSXFCGTPNYIAP 179
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HPNI++ + +V + K G + +LT++ + L+ K+ + R + V
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK------VTLSEKETRKIMRALLEV 136
Query: 252 ----HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
H+L ++HRDLK +N+L+ D +IK+ DFG + E + GT ++AP
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAP 192
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HPNI++ + +V + K G + +LT++ + L+ K+ + R + V
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK------VTLSEKETRKIMRALLEV 136
Query: 252 ----HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
H+L ++HRDLK +N+L+ D +IK+ DFG + E + GT ++AP
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAP 192
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 187 LATLKHPNIVRFIGAC--RKPMVWCIVTEYAKGGSVRQFLTK----RQNRSVPLKLAVKQ 240
L LKHPNIVR+ R IV EY +GG + +TK RQ L V
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 241 ALDVARGMAYVHRLG-----LIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPE 294
L +A + HR ++HRDLK N+ + +++K+ DFG+ARI T
Sbjct: 119 QLTLA--LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF 176
Query: 295 TGTYRWMAP 303
GT +M+P
Sbjct: 177 VGTPYYMSP 185
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 14/129 (10%)
Query: 187 LATLKHPNIVRFIGAC--RKPMVWCIVTEYAKGGSVRQFLTK----RQNRSVPLKLAVKQ 240
L LKHPNIVR+ R IV EY +GG + +TK RQ L V
Sbjct: 59 LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 241 ALDVARGMAYVHRLG-----LIHRDLKSDNLLIFSDKSIKIADFGVARI-EVQTEGMTPE 294
L +A + HR ++HRDLK N+ + +++K+ DFG+ARI T
Sbjct: 119 QLTLA--LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF 176
Query: 295 TGTYRWMAP 303
GT +M+P
Sbjct: 177 VGTPYYMSP 185
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLY-----RGTYNGEEVAIKILERPENDPEKA 173
EG E D +L K+ QG+FGK++ G+ + A+K+L++
Sbjct: 17 EGHEKADPSQFELLKV-----LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL----K 67
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR---QNR 230
L + HP IV+ A + ++ ++ +GG + L+K
Sbjct: 68 VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 127
Query: 231 SVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG 290
V LA ++A + ++H LG+I+RDLK +N+L+ + IK+ DFG+++ + E
Sbjct: 128 DVKFYLA-----ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 182
Query: 291 MTPE-TGTYRWMAP 303
GT +MAP
Sbjct: 183 KAYSFCGTVEYMAP 196
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLY-----RGTYNGEEVAIKILERPENDPEKA 173
EG E D +L K+ QG+FGK++ G+ + A+K+L++
Sbjct: 16 EGHEKADPSQFELLKV-----LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL----K 66
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR---QNR 230
L + HP IV+ A + ++ ++ +GG + L+K
Sbjct: 67 VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 126
Query: 231 SVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG 290
V LA ++A + ++H LG+I+RDLK +N+L+ + IK+ DFG+++ + E
Sbjct: 127 DVKFYLA-----ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181
Query: 291 MTPE-TGTYRWMAP 303
GT +MAP
Sbjct: 182 KAYSFCGTVEYMAP 195
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HPNI++ + +V + K G + +LT++ + L+ K+ + R + V
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK------VTLSEKETRKIMRALLEV 123
Query: 252 ----HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
H+L ++HRDLK +N+L+ D +IK+ DFG + E + GT ++AP
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAP 179
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNG--EEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
+ L N +G+FGK+ G E A+KIL++ D
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKK---DVVIQDDDVECTMVEKRV 73
Query: 187 LATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
LA P + + +C + M V EY GG + + + P AV A ++A
Sbjct: 74 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPH--AVFYAAEIA 131
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 303
G+ ++ G+I+RDLK DN+++ S+ IKIADFG+ + + +G+T + GT ++AP
Sbjct: 132 IGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW-DGVTTKXFCGTPDYIAP 190
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTYNG--EEVAIKILERPENDPEKAXXXXXXXXXXXXX 186
+ L N +G+FGK+ G E A+KIL++ D
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKK---DVVIQDDDVECTMVEKRV 394
Query: 187 LATLKHPNIVRFIGACRKPM-VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
LA P + + +C + M V EY GG + + + P AV A ++A
Sbjct: 395 LALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPH--AVFYAAEIA 452
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE--TGTYRWMAP 303
G+ ++ G+I+RDLK DN+++ S+ IKIADFG+ + + +G+T + GT ++AP
Sbjct: 453 IGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW-DGVTTKXFCGTPDYIAP 511
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 23/194 (11%)
Query: 119 EGLENFDEWTIDLRKLNMGDAFAQGAFGKLY-----RGTYNGEEVAIKILERPENDPEKA 173
EG E D +L K+ QG+FGK++ G+ + A+K+L++
Sbjct: 16 EGHEKADPSQFELLKV-----LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL----K 66
Query: 174 XXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR---QNR 230
L + HP IV+ A + ++ ++ +GG + L+K
Sbjct: 67 VRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE 126
Query: 231 SVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG 290
V LA ++A + ++H LG+I+RDLK +N+L+ + IK+ DFG+++ + E
Sbjct: 127 DVKFYLA-----ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK 181
Query: 291 MTPE-TGTYRWMAP 303
GT +MAP
Sbjct: 182 KAYSFCGTVEYMAP 195
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 32/160 (20%)
Query: 157 EVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAK 216
E A+KI+++ + DP + L +HPNI+ +VTE K
Sbjct: 49 EFAVKIIDKSKRDPTEEIEIL---------LRYGQHPNIITLKDVYDDGKYVYVVTELMK 99
Query: 217 GGSV------RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFS 270
GG + ++F ++R+ +V + + + Y+H G++HRDLK N+L
Sbjct: 100 GGELLDKILRQKFFSEREASAV--------LFTITKTVEYLHAQGVVHRDLKPSNILYVD 151
Query: 271 D----KSIKIADFGVARIEVQTEG---MTPETGTYRWMAP 303
+ +SI+I DFG A+ +++ E MTP T ++AP
Sbjct: 152 ESGNPESIRICDFGFAK-QLRAENGLLMTP-CYTANFVAP 189
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
L L+H N+V + C+K W +V E+ ++ L N + ++ K +
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFV-DHTILDDLELFPN-GLDYQVVQKYLFQIIN 135
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
G+ + H +IHRD+K +N+L+ +K+ DFG AR + E E T + AP
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXX 178
D + R L +G FG + Y+ G VA+K L+ D ++
Sbjct: 3 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR------ 56
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP--MVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
L L IV++ G P +V EY G +R FL + + R +L
Sbjct: 57 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 116
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+ + + +GM Y+ +HRDL + N+L+ S+ +KIADFG+A++
Sbjct: 117 LLYSS-QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 163
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 207 VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
+W ++ E+ +GG++ +++ + + + L + +AY+H G+IHRD+KSD++
Sbjct: 117 LW-VLMEFLQGGALTDIVSQVRLNEEQIATVCEAVL---QALAYLHAQGVIHRDIKSDSI 172
Query: 267 LIFSDKSIKIADFG-VARIEVQTEGMTPETGTYRWMAP 303
L+ D +K++DFG A+I GT WMAP
Sbjct: 173 LLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAP 210
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXX 178
D + R L +G FG + Y+ G VA+K L+ D ++
Sbjct: 16 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR------ 69
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP--MVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
L L IV++ G P +V EY G +R FL + + R +L
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 129
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+ + + +GM Y+ +HRDL + N+L+ S+ +KIADFG+A++
Sbjct: 130 LLYSS-QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 176
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 123 NFDEWTIDL--RKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXX 178
+F T++L +L + A+G F +Y +G E A+K L E + +A
Sbjct: 17 DFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEV 76
Query: 179 XXXXXXXXLATLKHPNIVRFIGACR--------KPMVWCIVTEYAKGGSVRQFLTKRQNR 230
HPNIV+F A + ++TE KG V +FL K ++R
Sbjct: 77 CFMKKLSG-----HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLV-EFLKKMESR 130
Query: 231 SVPLKL--AVKQALDVARGMAYVHRLG--LIHRDLKSDNLLIFSDKSIKIADFGVA 282
PL +K R + ++HR +IHRDLK +NLL+ + +IK+ DFG A
Sbjct: 131 G-PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 125 DEWTIDLRKLNMGDAFAQGAFGKLYRGTYN------GEEVAIKILERPENDPEKAXXXXX 178
D + R L +G FG + Y+ G VA+K L+ D ++
Sbjct: 4 DPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR------ 57
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP--MVWCIVTEYAKGGSVRQFLTKRQNRSVPLKL 236
L L IV++ G P +V EY G +R FL + + R +L
Sbjct: 58 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRL 117
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+ + + +GM Y+ +HRDL + N+L+ S+ +KIADFG+A++
Sbjct: 118 LLYSS-QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL 164
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAP 194
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 135 NMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ + +GAF + R + G E A KI+ N + + L+H
Sbjct: 8 DVKEELGKGAFSVVRRCVHKTTGLEFAAKII----NTKKLSARDFQKLEREARICRKLQH 63
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYV 251
PNIVR + ++ +V + GG + + + R+ S ++Q L+ +AY
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SIAYC 120
Query: 252 HRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEV-QTEGMTPETGTYRWMAP 303
H G++HR+LK +NLL+ S ++K+ADFG+A IEV +E GT +++P
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSP 175
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 135 NMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ + +GAF + R + G E A KI+ N + + L+H
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKII----NTKKLSARDFQKLEREARICRKLQH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYV 251
PNIVR + ++ +V + GG + + + R+ S ++Q L+ +AY
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SIAYC 121
Query: 252 HRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEV-QTEGMTPETGTYRWMAP 303
H G++HR+LK +NLL+ S ++K+ADFG+A IEV +E GT +++P
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSP 176
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 16/126 (12%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK--QALDV 244
++ L HPNIV+ G P +V E+ G + L +++ P+K +VK LD+
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLL---DKAHPIKWSVKLRLMLDI 131
Query: 245 ARGMAYVHRLG--LIHRDLKSDNLLIFS-----DKSIKIADFGVARIEVQTEGMTPETGT 297
A G+ Y+ ++HRDL+S N+ + S K+ADF +++ V + ++ G
Sbjct: 132 ALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS--VSGLLGN 189
Query: 298 YRWMAP 303
++WMAP
Sbjct: 190 FQWMAP 195
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 134 LNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
L + + A+G FG +++ + VA+KI P D + +KH
Sbjct: 17 LQLLEIKARGRFGCVWKAQLMNDFVAVKIF--PLQDKQSWQSEREIFST-----PGMKHE 69
Query: 194 NIVRFIGACRK-----PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGM 248
N+++FI A ++ +W ++T + GS+ +L + + A ++RG+
Sbjct: 70 NLLQFIAAEKRGSNLEVELW-LITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGL 125
Query: 249 AYVH-----------RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP---- 293
+Y+H + + HRD KS N+L+ SD + +ADFG+A V+ E P
Sbjct: 126 SYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA---VRFEPGKPPGDT 182
Query: 294 --ETGTYRWMAP 303
+ GT R+MAP
Sbjct: 183 HGQVGTRRYMAP 194
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 138 DAFAQGAFGKLYRGTYN-GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+ +G +G +Y+ N GE A+K + + D L LKH NIV
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKED----EGIPSTTIREISILKELKHSNIV 63
Query: 197 RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN--RSVPLKLAVKQALDVARGMAYVHRL 254
+ +V E+ +++ L + SV K + Q L+ G+AY H
Sbjct: 64 KLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLN---GIAYCHDR 119
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI + +KIADFG+AR + T E T + AP
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 15/182 (8%)
Query: 129 IDLRKLNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERP----ENDPEKAXXXXXXXXX 182
+ + + +G+FGK++ + + AIK L++ ++D E
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS- 73
Query: 183 XXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQAL 242
+HP + + V EY GG + + + L A A
Sbjct: 74 -----LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAA 126
Query: 243 DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE-TGTYRWM 301
++ G+ ++H G+++RDLK DN+L+ D IKIADFG+ + + + T E GT ++
Sbjct: 127 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYI 186
Query: 302 AP 303
AP
Sbjct: 187 AP 188
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 27/137 (19%)
Query: 157 EVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAK 216
E A+KI+++ + DP + L +HPNI+ +VTE K
Sbjct: 49 EFAVKIIDKSKRDPTE---------EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXK 99
Query: 217 GGSV------RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFS 270
GG + ++F ++R+ +V + + + Y+H G++HRDLK N+L
Sbjct: 100 GGELLDKILRQKFFSEREASAV--------LFTITKTVEYLHAQGVVHRDLKPSNILYVD 151
Query: 271 D----KSIKIADFGVAR 283
+ +SI+I DFG A+
Sbjct: 152 ESGNPESIRICDFGFAK 168
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 138 DAFAQGAFGKLYRGTYN-GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+ +G +G +Y+ N GE A+K + + D L LKH NIV
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKED----EGIPSTTIREISILKELKHSNIV 63
Query: 197 RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN--RSVPLKLAVKQALDVARGMAYVHRL 254
+ +V E+ +++ L + SV K + Q L+ G+AY H
Sbjct: 64 KLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLN---GIAYCHDR 119
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI + +KIADFG+AR + T E T + AP
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAP 169
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 135 NMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
++ + +GAF + R + G E A KI+ N + + L+H
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKII----NTKKLSARDFQKLEREARICRKLQH 64
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYV 251
PNIVR + ++ +V + GG + + + R+ S ++Q L+ +AY
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE---SIAYC 121
Query: 252 HRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEV-QTEGMTPETGTYRWMAP 303
H G++HR+LK +NLL+ S ++K+ADFG+A IEV +E GT +++P
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEAWHGFAGTPGYLSP 176
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + M PE T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 138 DAFAQGAFGKLYRGTYN-GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
+ +G +G +Y+ N GE A+K + + D L LKH NIV
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKED----EGIPSTTIREISILKELKHSNIV 63
Query: 197 RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN--RSVPLKLAVKQALDVARGMAYVHRL 254
+ +V E+ +++ L + SV K + Q L+ G+AY H
Sbjct: 64 KLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLN---GIAYCHDR 119
Query: 255 GLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
++HRDLK NLLI + +KIADFG+AR + T E T + AP
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAP 169
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 90
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANSFVGTAQYVS 202
Query: 303 P 303
P
Sbjct: 203 P 203
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + M PE T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAP 194
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 135 NMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ + +GAF + R G+E A KI+ N + + LKH
Sbjct: 25 QLFEELGKGAFSVVRRCVKVLAGQEYAAKII----NTKKLSARDHQKLEREARICRLLKH 80
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYV 251
PNIVR + + ++ + GG + + + R+ S ++Q L+ + +
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE---AVLHC 137
Query: 252 HRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEVQTE 289
H++G++HRDLK +NLL+ S ++K+ADFG+A IEV+ E
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGE 177
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 142 QGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G F ++YR +G VA+K ++ + KA L L HPN++++
Sbjct: 42 RGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL---LKQLNHPNVIKYY 98
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLT--KRQNRSVPLKLAVKQALDVARGMAYVHRLGLI 257
+ + IV E A G + + + K+Q R +P + K + + + ++H ++
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVM 158
Query: 258 HRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
HRD+K N+ I + +K+ D G+ R +T GT +M+P
Sbjct: 159 HRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSP 205
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 90
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 303 P 303
P
Sbjct: 203 P 203
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 227 RQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFS-DKSIKIADFGVARIE 285
R RS+P+ L + R + ++H LG+ HRD+K NLL+ S D ++K+ DFG A+
Sbjct: 133 RSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKL 192
Query: 286 VQTEGMTPETGTYRWMAP 303
+ +E + + AP
Sbjct: 193 IPSEPSVAXICSRFYRAP 210
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 91
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 149
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANSFVGTAQYVS 203
Query: 303 P 303
P
Sbjct: 204 P 204
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 29/163 (17%)
Query: 139 AFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
QGAFG++ R + AIK + E LA+L H +V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-------KLSTILSEVMLLASLNHQYVV 65
Query: 197 RF-------------IGACRKPMVWCIVTEYAKGGSVRQFLTKR---QNRSVPLKLAVKQ 240
R+ + A +K I EY + G++ + Q R +L +Q
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL-FRQ 124
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
L+ ++Y+H G+IHRDLK N+ I +++KI DFG+A+
Sbjct: 125 ILE---ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V EY G +R FL + + R +L + + + +GM Y+ +HRDL + N+L+
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-QICKGMEYLGSRRCVHRDLAARNILVE 145
Query: 270 SDKSIKIADFGVARI 284
S+ +KIADFG+A++
Sbjct: 146 SEAHVKIADFGLAKL 160
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 87
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 145
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANSFVGTAQYVS 199
Query: 303 P 303
P
Sbjct: 200 P 200
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 90
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 303 P 303
P
Sbjct: 203 P 203
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 90
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 303 P 303
P
Sbjct: 203 P 203
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 88
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 146
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 200
Query: 303 P 303
P
Sbjct: 201 P 201
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 139 AFAQGAFGKLYR-----GTYNGEEVAIKILERP---ENDPEKAXXXXXXXXXXXXXLATL 190
+G +GK+++ G G+ A+K+L++ N + A L +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI-----LEEV 78
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAY 250
KHP IV I A + ++ EY GG + F+ + A +++ + +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 251 VHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 303
+H+ G+I+RDLK +N+++ +K+ DFG+ + + +T GT +MAP
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAP 190
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 95
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 96 HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 153
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 154 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 207
Query: 303 P 303
P
Sbjct: 208 P 208
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 139 AFAQGAFGKLYR-----GTYNGEEVAIKILERP---ENDPEKAXXXXXXXXXXXXXLATL 190
+G +GK+++ G G+ A+K+L++ N + A L +
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI-----LEEV 78
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAY 250
KHP IV I A + ++ EY GG + F+ + A +++ + +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 251 VHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 303
+H+ G+I+RDLK +N+++ +K+ DFG+ + + +T GT +MAP
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAP 190
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 88
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 146
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANAFVGTAQYVS 200
Query: 303 P 303
P
Sbjct: 201 P 201
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 90
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 303 P 303
P
Sbjct: 203 P 203
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 88
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 146
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 200
Query: 303 P 303
P
Sbjct: 201 P 201
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVA 245
+ +L HPNI+R +V E GG + + + KR R A + DV
Sbjct: 77 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD---AARIMKDVL 133
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMA 302
+AY H+L + HRDLK +N L + D +K+ DFG+A + M + GT +++
Sbjct: 134 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 193
Query: 303 P 303
P
Sbjct: 194 P 194
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 131 LRKLNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERP-ENDPEKAXXXXXXXXXXXXXL 187
L ++ + GAFG ++R T G A K + P E+D E +
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT-------M 102
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
+ L+HP +V A ++ E+ GG + + + N+ + AV+ V +G
Sbjct: 103 SVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKG 161
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++H +H DLK +N++ + +S +K+ DFG+ + + TGT + AP
Sbjct: 162 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 219
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 93
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 151
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 152 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 205
Query: 303 P 303
P
Sbjct: 206 P 206
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 88
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 146
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 147 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 200
Query: 303 P 303
P
Sbjct: 201 P 201
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN---KVPYVTRERDVMSRLD 91
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 149
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 150 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 203
Query: 303 P 303
P
Sbjct: 204 P 204
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 143 GAFGKLYRG--TYNGEEVAIKILE-RPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
G FG++++ T G ++A KI++ R D E+ + L H N+++
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISV-------MNQLDHANLIQLY 152
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLK--LAVKQALDVARGMAYVHRLGLI 257
A +V EY GG + + L L +KQ + G+ ++H++ ++
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ---ICEGIRHMHQMYIL 209
Query: 258 HRDLKSDNLLIFS--DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
H DLK +N+L + K IKI DFG+AR E + GT ++AP
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAP 257
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 143 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 199
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 90
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 148
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 202
Query: 303 P 303
P
Sbjct: 203 P 203
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L K+ R +P ++ K ++ V +G+ Y+
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLR 124
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ ++ E GT +M+P
Sbjct: 125 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG-QLIDEMANEFVGTRSYMSP 175
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 193
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVA 245
+ +L HPNI+R +V E GG + + + KR R A + DV
Sbjct: 60 MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD---AARIMKDVL 116
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMA 302
+AY H+L + HRDLK +N L + D +K+ DFG+A + M + GT +++
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 303 P 303
P
Sbjct: 177 P 177
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 72
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 130
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 131 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 184
Query: 303 P 303
P
Sbjct: 185 P 185
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 87
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 145
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 146 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 199
Query: 303 P 303
P
Sbjct: 200 P 200
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 194
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 187
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + MTP T + AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 188
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR MTP T + AP
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAP 192
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 131 LRKLNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERP-ENDPEKAXXXXXXXXXXXXXL 187
L ++ + GAFG ++R T G A K + P E+D E +
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQT-------M 208
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
+ L+HP +V A ++ E+ GG + + + N+ + AV+ V +G
Sbjct: 209 SVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKG 267
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKS--IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++H +H DLK +N++ + +S +K+ DFG+ + + TGT + AP
Sbjct: 268 LCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAP 325
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V EY GG + L+K R +P ++A ++ + VHRLG +HRD+K DN+L+
Sbjct: 138 LVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD 196
Query: 270 SDKSIKIADFG 280
I++ADFG
Sbjct: 197 RCGHIRLADFG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 66
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 124
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 125 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 178
Query: 303 P 303
P
Sbjct: 179 P 179
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 17/175 (9%)
Query: 138 DAFAQGAFGKLYRG--TYNGEEVAIK--ILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
+ G + +Y+G G VA+K L+ E P A + LKH
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISL-------MKELKHE 63
Query: 194 NIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQ----NRSVPLKLAVKQALDVARGMA 249
NIVR +V E+ +++++ R R + L L + +G+A
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 250 YVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR-IEVQTEGMTPETGTYRWMAP 303
+ H ++HRDLK NLLI +K+ DFG+AR + + E T + AP
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 67
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 125
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 126 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 179
Query: 303 P 303
P
Sbjct: 180 P 180
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVA 245
L L HP I++ I + IV E +GG + + + ++ + KL Q L
Sbjct: 208 LKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML--- 263
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMA 302
+ Y+H G+IHRDLK +N+L+ S D IKI DFG ++I +T M GT ++A
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 323
Query: 303 P 303
P
Sbjct: 324 P 324
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 65
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 123
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 124 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 177
Query: 303 P 303
P
Sbjct: 178 P 178
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 130 DLRKLNMGDAFAQGAFGKLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLAT 189
D R L +G+F +Y+G V + E D + L
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCEL--QDRKLTKSERQRFKEEAEXLKG 81
Query: 190 LKHPNIVRFIGAC------RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
L+HPNIVRF + +K +V +VTE G+++ +L ++ + +K+
Sbjct: 82 LQHPNIVRFYDSWESTVKGKKCIV--LVTELXTSGTLKTYL--KRFKVXKIKVLRSWCRQ 137
Query: 244 VARGMAYVHRLG--LIHRDLKSDNLLIFSDK-SIKIADFGVARIE 285
+ +G+ ++H +IHRDLK DN+ I S+KI D G+A ++
Sbjct: 138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQALDVA 245
L L HP I++ I + IV E +GG + + + ++ + KL Q L
Sbjct: 194 LKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML--- 249
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMA 302
+ Y+H G+IHRDLK +N+L+ S D IKI DFG ++I +T M GT ++A
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 309
Query: 303 P 303
P
Sbjct: 310 P 310
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 136 MGDAFAQGAFG--KLYRGTYNGEEVAIKILERP--------ENDPEKAXXXXXXXXXXXX 185
M GA G KL ++VAIKI+ + E DP
Sbjct: 20 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADP------ALNVETEIE 73
Query: 186 XLATLKHPNIVR---FIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQA 241
L L HP I++ F A + IV E +GG + + + ++ + KL Q
Sbjct: 74 ILKKLNHPCIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTY 298
L + Y+H G+IHRDLK +N+L+ S D IKI DFG ++I +T M GT
Sbjct: 130 L---LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 186
Query: 299 RWMAP 303
++AP
Sbjct: 187 TYLAP 191
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLY-----RGTYNGEEVAIKILERPENDPEKAX 174
G+ENF+ + GA+GK++ G G+ A+K+L++ +KA
Sbjct: 52 GIENFE----------LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKA-TIVQKAK 100
Query: 175 XXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPL 234
+ P +V A + ++ +Y GG + L++R+ R
Sbjct: 101 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE-RFTEH 159
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR--IEVQTEGMT 292
++ + ++ + ++H+LG+I+RD+K +N+L+ S+ + + DFG+++ + +TE
Sbjct: 160 EVQIYVG-EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY 218
Query: 293 PETGTYRWMAP 303
GT +MAP
Sbjct: 219 DFCGTIEYMAP 229
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 136 MGDAFAQGAFG--KLYRGTYNGEEVAIKILERP--------ENDPEKAXXXXXXXXXXXX 185
M GA G KL ++VAIKI+ + E DP
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADP------ALNVETEIE 67
Query: 186 XLATLKHPNIVR---FIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQA 241
L L HP I++ F A + IV E +GG + + + ++ + KL Q
Sbjct: 68 ILKKLNHPCIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTY 298
L + Y+H G+IHRDLK +N+L+ S D IKI DFG ++I +T M GT
Sbjct: 124 L---LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 299 RWMAP 303
++AP
Sbjct: 181 TYLAP 185
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 134 LNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
G +G+F L R E AIKILE+ E ++ L
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV---MSRLD 68
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HP V+ + YAK G + +++ R+ S ++ + Y+
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYL 126
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET---------GTYRWMA 302
H G+IHRDLK +N+L+ D I+I DFG A++ ++PE+ GT ++++
Sbjct: 127 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKV------LSPESKQARANXFVGTAQYVS 180
Query: 303 P 303
P
Sbjct: 181 P 181
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 136 MGDAFAQGAFG--KLYRGTYNGEEVAIKILERP--------ENDPEKAXXXXXXXXXXXX 185
M GA G KL ++VAIKI+ + E DP
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADP------ALNVETEIE 67
Query: 186 XLATLKHPNIVR---FIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQA 241
L L HP I++ F A + IV E +GG + + + ++ + KL Q
Sbjct: 68 ILKKLNHPCIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTY 298
L + Y+H G+IHRDLK +N+L+ S D IKI DFG ++I +T M GT
Sbjct: 124 L---LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 299 RWMAP 303
++AP
Sbjct: 181 TYLAP 185
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 136 MGDAFAQGAFG--KLYRGTYNGEEVAIKILERP--------ENDPEKAXXXXXXXXXXXX 185
M GA G KL ++VAIKI+ + E DP
Sbjct: 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADP------ALNVETEIE 67
Query: 186 XLATLKHPNIVR---FIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQA 241
L L HP I++ F A + IV E +GG + + + ++ + KL Q
Sbjct: 68 ILKKLNHPCIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTY 298
L + Y+H G+IHRDLK +N+L+ S D IKI DFG ++I +T M GT
Sbjct: 124 L---LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 180
Query: 299 RWMAP 303
++AP
Sbjct: 181 TYLAP 185
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 81/185 (43%), Gaps = 30/185 (16%)
Query: 136 MGDAFAQGAFG--KLYRGTYNGEEVAIKILERP--------ENDPEKAXXXXXXXXXXXX 185
M GA G KL ++VAIKI+ + E DP
Sbjct: 13 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADP------ALNVETEIE 66
Query: 186 XLATLKHPNIVR---FIGACRKPMVWCIVTEYAKGGSV-RQFLTKRQNRSVPLKLAVKQA 241
L L HP I++ F A + IV E +GG + + + ++ + KL Q
Sbjct: 67 ILKKLNHPCIIKIKNFFDA----EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTY 298
L + Y+H G+IHRDLK +N+L+ S D IKI DFG ++I +T M GT
Sbjct: 123 L---LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTP 179
Query: 299 RWMAP 303
++AP
Sbjct: 180 TYLAP 184
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L K+ R +P ++ K ++ V +G+ Y+
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLR 183
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ + + + GT +M+P
Sbjct: 184 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V EYA GG + L + S P A A + Y+H L LI+RDLK +NLLI
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID 176
Query: 270 SDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
IK+ADFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L K+ R +P ++ K ++ V +G+ Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ + + + GT +M+P
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L K+ R +P ++ K ++ V +G+ Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ + + + GT +M+P
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 135 NMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ + +GAF + R G+E A KI+ N + + LKH
Sbjct: 7 QLFEELGKGAFSVVRRCMKIPTGQEYAAKII----NTKKLSARDHQKLEREARICRLLKH 62
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYV 251
PNIVR + + +V + GG + + + R+ S ++Q L+ + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE---SVNHC 119
Query: 252 HRLGLIHRDLKSDNLLIFSDK---SIKIADFGVARIEVQ 287
H G++HRDLK +NLL+ S ++K+ADFG+A IEVQ
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQ 157
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 14/166 (8%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXX 177
G +++DE L+ + + G F K+ + GE VAIKI+ D
Sbjct: 1 GPKDYDEL---LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIM-----DKNTLGSDL 52
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKL 236
L L+H +I + +V EY GG + ++ + S ++
Sbjct: 53 PRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV 112
Query: 237 AVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA 282
+Q + +AYVH G HRDLK +NLL +K+ DFG+
Sbjct: 113 VFRQ---IVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLC 155
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
++TID ++G +G FG +Y R N +A+K+L + + + E
Sbjct: 11 KFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 68
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR----QNRSVPLKLAVK 239
+ L+HPNI+R ++ E+A G + + L K + RS
Sbjct: 69 Q---SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF----- 120
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
++A + Y H +IHRD+K +NLL+ +KIADFG
Sbjct: 121 -MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L K+ R +P ++ K ++ V +G+ Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ + + + GT +M+P
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L K+ R +P ++ K ++ V +G+ Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ + + + GT +M+P
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L K+ R +P ++ K ++ V +G+ Y+
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLR 140
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ + + GT +M+P
Sbjct: 141 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSP 191
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLLI + +KI DFG+ARI E G E RW
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L K+ R +P ++ K ++ V +G+ Y+
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLR 121
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ + + + GT +M+P
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 172
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 92/190 (48%), Gaps = 15/190 (7%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFGKL--YRGTYNGEEVAIKILERPENDPEKAXXXX 177
G +NF+ DL + +GA+G + R +G+ +A+K + N E+
Sbjct: 42 GNQNFEVKADDLEPIM---ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLM 98
Query: 178 XXXXXXXXXLATLKHPNIVRFIGAC-RKPMVW-CI-VTEYAKGGSVRQFLTKRQNRSVPL 234
+ T+ P V F GA R+ VW C+ + + + +Q + K Q ++P
Sbjct: 99 DLDIS----MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQ--TIPE 152
Query: 235 KLAVKQALDVARGMAYVH-RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP 293
+ K A+ + + + ++H +L +IHRD+K N+LI + +K+ DFG++ V + T
Sbjct: 153 DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212
Query: 294 ETGTYRWMAP 303
+ G +MAP
Sbjct: 213 DAGCKPYMAP 222
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 17/161 (10%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
++TID ++G +G FG +Y R N +A+K+L + + + E
Sbjct: 10 KFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR----QNRSVPLKLAVK 239
+ L+HPNI+R ++ E+A G + + L K + RS
Sbjct: 68 Q---SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF----- 119
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
++A + Y H +IHRD+K +NLL+ +KIADFG
Sbjct: 120 -MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV- 251
P IV F GA I E+ GGS+ Q L K+ R +P ++ K ++ V +G+ Y+
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL-KKAGR-IPEQILGKVSIAVIKGLTYLR 148
Query: 252 HRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ ++HRD+K N+L+ S IK+ DFGV+ + + + GT +M+P
Sbjct: 149 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS-FVGTRSYMSP 199
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 192 HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV 251
HPNIV+ + +V E GG + + + K+++ S + + L ++++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL--VSAVSHM 122
Query: 252 HRLGLIHRDLKSDNLLIFSDKS----IKIADFGVARIE-VQTEGMTPETGTYRWMAP 303
H +G++HRDLK +NLL F+D++ IKI DFG AR++ + + T + AP
Sbjct: 123 HDVGVVHRDLKPENLL-FTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAP 178
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLK---QIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI IK+ADFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 15/169 (8%)
Query: 142 QGAFGKLYRGTY--NGEEVAIKILERP----ENDPEKAXXXXXXXXXXXXXLATLKHPNI 195
+G+FGK++ + + AIK L++ ++D E +HP +
Sbjct: 27 KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS------LAWEHPFL 80
Query: 196 VRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLG 255
+ V EY GG + + + L A A ++ G+ ++H G
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 256 LIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPE-TGTYRWMAP 303
+++RDLK DN+L+ D IKIADFG+ + + + T GT ++AP
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAP 187
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 135 NMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKH 192
+ + +GAF + R G+E A KI+ N + + LKH
Sbjct: 7 QLFEELGKGAFSVVRRCMKIPTGQEYAAKII----NTKKLSARDHQKLEREARICRLLKH 62
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYV 251
PNIVR + + +V + GG + + + R+ S ++Q L+ + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE---SVNHC 119
Query: 252 HRLGLIHRDLKSDNLLIFSDK---SIKIADFGVARIEVQ 287
H G++HRDLK +NLL+ S ++K+ADFG+A IEVQ
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQ 157
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 60/104 (57%), Gaps = 8/104 (7%)
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGM 248
LKHPNIVR + + ++ + GG + + + R+ S ++Q L+ +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE---AV 123
Query: 249 AYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEVQTE 289
+ H++G++HR+LK +NLL+ S ++K+ADFG+A IEV+ E
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGE 166
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H G+IHRDLK N+++ SD ++KI DFG+AR + M P T + AP
Sbjct: 140 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAP 196
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 23/204 (11%)
Query: 112 MDSNSPTEGLENFDEWTIDLRKLNM---GDAFAQGAFGKLYRGT-------YNGEEVAIK 161
+ S+ + L+ + +D R + G +G F K Y T + G+ V
Sbjct: 3 LGSDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKS 62
Query: 162 ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVR 221
+L +P + + +L +P++V F G +V E + S+
Sbjct: 63 MLLKPHQKEKMSTEIAIH--------KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLL 114
Query: 222 QFLTKRQNRSVP-LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+ +R+ + P + ++Q + +G+ Y+H +IHRDLK NL + D +KI DFG
Sbjct: 115 ELHKRRKAVTEPEARYFMRQTI---QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFG 171
Query: 281 VA-RIEVQTEGMTPETGTYRWMAP 303
+A +IE E GT ++AP
Sbjct: 172 LATKIEFDGERKKDLCGTPNYIAP 195
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 139 AFAQGAFGK--LYRGTYNGEEVAIKILER----PENDPEKAXXXXXXXXXXXXXLATLKH 192
+G+FGK L R G+ A+K+L++ ++D E H
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR------NH 83
Query: 193 PNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
P + + + P V E+ GG + + K +R A A ++ + ++H
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLH 141
Query: 253 RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 303
G+I+RDLK DN+L+ + K+ADFG+ + E G+T T GT ++AP
Sbjct: 142 DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDYIAP 193
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGM 248
LKH NIVR + + +V + GG + + + R+ S ++Q L+ +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE---AV 116
Query: 249 AYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEVQ 287
+ H++G++HRDLK +NLL+ S ++K+ADFG+A IEVQ
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQ 157
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI---LQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EYA GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NL+I IK+ DFG+A R++ +T + GT ++AP
Sbjct: 167 LKPENLMIDQQGYIKVTDFGLAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 8/104 (7%)
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGM 248
LKHPNIVR + + +V + GG + + + R+ S + Q L+ +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILE---SV 143
Query: 249 AYVHRLGLIHRDLKSDNLLIFSD---KSIKIADFGVARIEVQTE 289
++H+ ++HRDLK +NLL+ S ++K+ADFG+A IEVQ E
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGE 186
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLK---QIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI IK+ADFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLK---QIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI IK+ADFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIKVADFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 11/104 (10%)
Query: 187 LATLKHPNIVRFIGACRKP-----MVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQA 241
LA + HP+IV+ V IV EY G Q L + + + +P+ A+
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGG----QSLKRSKGQKLPVAEAIAYL 188
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG-VARI 284
L++ ++Y+H +GL++ DLK +N+++ +++ +K+ D G V+RI
Sbjct: 189 LEILPALSYLHSIGLVYNDLKPENIML-TEEQLKLIDLGAVSRI 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLK---QIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EYA GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NL+I IK+ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 34/147 (23%)
Query: 187 LATLKHPNIVRFIGACRK-----------PMVWC-IVTEYAKGGSVRQFLTKR-----QN 229
LA L+HP IVR+ A + P V+ I + + +++ ++ R +
Sbjct: 57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 230 RSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTE 289
RSV L + L +A + ++H GL+HRDLK N+ D +K+ DFG+ Q E
Sbjct: 117 RSVCLHIF----LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 290 G----MTP---------ETGTYRWMAP 303
+TP + GT +M+P
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSP 199
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 139 AFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
QGAFG++ R + AIK + E LA+L H +V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-------KLSTILSEVMLLASLNHQYVV 65
Query: 197 RF-------------IGACRKPMVWCIVTEYAKGGSVRQFLTKR---QNRSVPLKLAVKQ 240
R+ + A +K I EY + ++ + Q R +L +Q
Sbjct: 66 RYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL-FRQ 124
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
L+ ++Y+H G+IHRDLK N+ I +++KI DFG+A+
Sbjct: 125 ILE---ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 20/182 (10%)
Query: 131 LRKLNMGDAFAQGAFGKLYRGT-------YNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+++ G +G F K Y T + G+ V +L +P EK
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAIH--- 96
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQAL 242
+L +P++V F G +V E + S+ + +R+ + P + ++Q +
Sbjct: 97 ----KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 243 DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWM 301
+G+ Y+H +IHRDLK NL + D +KI DFG+A +IE E GT ++
Sbjct: 153 ---QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYI 209
Query: 302 AP 303
AP
Sbjct: 210 AP 211
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 20/182 (10%)
Query: 131 LRKLNMGDAFAQGAFGKLYRGT-------YNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+++ G +G F K Y T + G+ V +L +P EK
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAIH--- 96
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQAL 242
+L +P++V F G +V E + S+ + +R+ + P + ++Q +
Sbjct: 97 ----KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 243 DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWM 301
+G+ Y+H +IHRDLK NL + D +KI DFG+A +IE E GT ++
Sbjct: 153 ---QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYI 209
Query: 302 AP 303
AP
Sbjct: 210 AP 211
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLK---QIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EYA GG + L + S P A A + Y+H L LI+RD
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NL+I IK+ DFG A R++ +T + GT ++AP
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 20/182 (10%)
Query: 131 LRKLNMGDAFAQGAFGKLYRGT-------YNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
+++ G +G F K Y T + G+ V +L +P EK
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK-EKMSTEIAIH--- 96
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQAL 242
+L +P++V F G +V E + S+ + +R+ + P + ++Q +
Sbjct: 97 ----KSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI 152
Query: 243 DVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWM 301
+G+ Y+H +IHRDLK NL + D +KI DFG+A +IE E GT ++
Sbjct: 153 ---QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 209
Query: 302 AP 303
AP
Sbjct: 210 AP 211
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 15/181 (8%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPEN--DPEKAXXXXXXXXXXXXXL 187
+K + D +G + R + G E A+KI+E PE+ L
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 188 ATLK-HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ HP+I+ I + +V + + G + +LT++ + L+ K+ + R
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK------VALSEKETRSIMR 207
Query: 247 GM----AYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMA 302
+ +++H ++HRDLK +N+L+ + I+++DFG + E + GT ++A
Sbjct: 208 SLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLA 267
Query: 303 P 303
P
Sbjct: 268 P 268
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 130 DLRKLNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXL 187
D+ KL + +GA+ K+ NG+E A+KI+E+ +A L
Sbjct: 12 DMYKLT-SELLGEGAYAKVQGAVSLQNGKEYAVKIIEK------QAGHSRSRVFREVETL 64
Query: 188 ATLK-HPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
+ + NI+ I + +V E +GGS+ + K+++ + + A + DVA
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNE--REASRVVRDVAA 122
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGV--------ARIEVQTEGMTPET 295
+ ++H G+ HRDLK +N+L S + +KI DF + + + T +T
Sbjct: 123 ALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 296 GTYRWMAP 303
G+ +MAP
Sbjct: 183 GSAEYMAP 190
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V EYA GG + L + S P A A + Y+H L LI+RDLK +NL+I
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 270 SDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
IK+ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 38 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 92
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 152
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 153 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 24 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 78
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 139 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V EYA GG + L + S P A A + Y+H L LI+RDLK +NL+I
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 270 SDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
IK+ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 37 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 91
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 151
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 152 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 38 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 92
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 152
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 153 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
RG+ Y+H G+IHRDLK N+ + D ++I DFG+AR E MT T + AP
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAP 197
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRI---LQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EYA GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NL+I I++ DFG+A R++ +T + GT ++AP
Sbjct: 167 LKPENLMIDQQGYIQVTDFGLAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
RG+ Y+H G+IHRDLK N+ + D ++I DFG+AR E MT T + AP
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAP 197
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L + G A+KIL++ + A L +HP +
Sbjct: 158 KGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH-RLGLIH 258
+ + C V EYA GG + F + R A ++ + Y+H +++
Sbjct: 215 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 272
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 303
RDLK +NL++ D IKI DFG+ + ++ +G T +T GT ++AP
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKTFCGTPEYLAP 318
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 60/121 (49%), Gaps = 8/121 (6%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQALDVA 245
L +KH NIV + +V + GG + + +R + L ++Q L
Sbjct: 60 LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAV 119
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFS---DKSIKIADFGVARIEVQTEGMTPETGTYRWMA 302
+ Y+H G++HRDLK +NLL + + I I DFG++++E Q M+ GT ++A
Sbjct: 120 K---YLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKME-QNGIMSTACGTPGYVA 175
Query: 303 P 303
P
Sbjct: 176 P 176
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 28 WEVPERYQNLA-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 82
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 83 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 142
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 143 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 11/167 (6%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L + G A+KIL++ + A L +HP +
Sbjct: 161 KGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH-RLGLIH 258
+ + C V EYA GG + F + R A ++ + Y+H +++
Sbjct: 218 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 275
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPET--GTYRWMAP 303
RDLK +NL++ D IKI DFG+ + ++ +G T +T GT ++AP
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMKTFCGTPEYLAP 321
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAV-----KQALDV 244
LKHP+IV + + +V E+ G + + KR + AV +Q L+
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTP--ETGTYR 299
R Y H +IHRD+K +N+L+ S ++ +K+ DFGVA I++ G+ GT
Sbjct: 143 LR---YCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGTPH 198
Query: 300 WMAP 303
+MAP
Sbjct: 199 FMAP 202
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 20 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 74
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 135 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 13/171 (7%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXX 177
G+E F + ++ ++G+ G F K R G E A K +++ ++ +
Sbjct: 1 GMETFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCR 59
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L + HPNI+ ++ E GG + FL ++++ S +
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 238 -VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS-----IKIADFGVA 282
+KQ LD G+ Y+H + H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLA 166
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 23 WEVPERYQNLS-PIGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 77
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 137
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 138 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 24 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 78
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 139 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 189 TLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQALDVARG 247
+L H ++V F G +V E + S+ + +R+ + P + ++Q + G
Sbjct: 73 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 129
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+HR +IHRDLK NL + D +KI DFG+A ++E E GT ++AP
Sbjct: 130 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 93
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---AGTPEYLAP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 94
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 95 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLK---QIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EYA GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NL+I I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLMIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 38 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 95
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 96 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 152
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 153 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 189 TLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQALDVARG 247
+L H ++V F G +V E + S+ + +R+ + P + ++Q + G
Sbjct: 73 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 129
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+HR +IHRDLK NL + D +KI DFG+A ++E E GT ++AP
Sbjct: 130 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 186
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 94
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 95 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 93
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 93
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 58 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 114
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 172
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT-PETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A+ + +G T GT ++AP
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGATWTLCGTPEYLAP 228
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 189 TLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQALDVARG 247
+L H ++V F G +V E + S+ + +R+ + P + ++Q + G
Sbjct: 77 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 133
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+HR +IHRDLK NL + D +KI DFG+A ++E E GT ++AP
Sbjct: 134 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAP 190
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 14 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 68
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 129 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 93
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 143 GAFGKLYRGTY-NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI-- 199
G+FG +++ +EVAIK K + +KHPN+V
Sbjct: 51 GSFGVVFQAKLVESDEVAIK----------KVLQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 200 ----GACRKPMVWCIVTEYAKGG---SVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH 252
G + + +V EY + R + +Q ++P+ L + R +AY+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQ--TMPMLLIKLYMYQLLRSLAYIH 158
Query: 253 RLGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
+G+ HRD+K NLL+ + K+ DFG A+I + E + + AP
Sbjct: 159 SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAP 210
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 14 WEVPERYQNLSPV-GSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 68
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 129 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 94
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 95 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---XGTPEYLAP 207
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 29 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 83
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 143
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 144 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 136 MGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
MG+ G F + R G+E A K +++ + L ++HP
Sbjct: 30 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHP 89
Query: 194 NIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSV-PLKLAVKQALDVARGMAYVH 252
NI+ ++ E GG + FL ++++ + +KQ LD G+ Y+H
Sbjct: 90 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLH 146
Query: 253 RLGLIHRDLKSDNLLIFS----DKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
+ H DLK +N+++ + IK+ DFG+A +IE E GT ++AP
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAP 201
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 94
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 95 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 94
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 95 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 23 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 77
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 137
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 138 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
RG+ Y+H G+IHRDLK N+ + D ++I DFG+AR E MT T + AP
Sbjct: 134 RGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR--QADEEMTGYVATRWYRAP 189
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 136 MGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
MG+ G F + R G+E A K +++ + L ++HP
Sbjct: 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 68
Query: 194 NIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSV-PLKLAVKQALDVARGMAYVH 252
NI+ ++ E GG + FL ++++ + +KQ LD G+ Y+H
Sbjct: 69 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLH 125
Query: 253 RLGLIHRDLKSDNLLIFS----DKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
+ H DLK +N+++ + IK+ DFG+A +IE E GT ++AP
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAP 180
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
G+ YVH G++HRDLK N L+ D S+K+ DFG+AR
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L + G A+KIL++ + A L +HP +
Sbjct: 18 KGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH-RLGLIH 258
+ + C V EYA GG + F + R A ++ + Y+H +++
Sbjct: 75 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 132
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 303
RDLK +NL++ D IKI DFG+ + ++ M GT ++AP
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 178
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 24 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 81
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 82 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 138
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 139 LTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 194
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 189 TLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQALDVARG 247
+L H ++V F G +V E + S+ + +R+ + P + ++Q + G
Sbjct: 95 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 151
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+HR +IHRDLK NL + D +KI DFG+A ++E E GT ++AP
Sbjct: 152 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 189 TLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQALDVARG 247
+L H ++V F G +V E + S+ + +R+ + P + ++Q + G
Sbjct: 97 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 153
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+HR +IHRDLK NL + D +KI DFG+A ++E E GT ++AP
Sbjct: 154 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 210
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVR--- 197
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 198 --FIGACRKPMVWC-IVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
+ +K +V+ +V +Y R R +++P+ + R +AY+H
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L + G A+KIL++ + A L +HP +
Sbjct: 19 KGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTLTENRVLQNSRHPFLTALK 75
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH-RLGLIH 258
+ + C V EYA GG + F + R A ++ + Y+H +++
Sbjct: 76 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 133
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 303
RDLK +NL++ D IKI DFG+ + ++ M GT ++AP
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 179
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 5/117 (4%)
Query: 189 TLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVP-LKLAVKQALDVARG 247
+L H ++V F G +V E + S+ + +R+ + P + ++Q + G
Sbjct: 71 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ---IVLG 127
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+HR +IHRDLK NL + D +KI DFG+A ++E E GT ++AP
Sbjct: 128 CQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAP 184
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLK---QIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EYA GG + L + P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NL+I IK+ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEY 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEY 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 41 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 95
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 155
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 156 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 29/163 (17%)
Query: 139 AFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
QGAFG++ R + AIK + E LA+L H +V
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-------KLSTILSEVXLLASLNHQYVV 65
Query: 197 RFIGA-------------CRKPMVWCIVTEYAKGGSVRQFLTKR---QNRSVPLKLAVKQ 240
R+ A +K I EY + ++ + Q R +L +Q
Sbjct: 66 RYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL-FRQ 124
Query: 241 ALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
L+ ++Y+H G+IHR+LK N+ I +++KI DFG+A+
Sbjct: 125 ILE---ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+ R
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 24 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 78
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 139 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 73 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 129
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 187
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 37 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 91
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 92 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 151
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 152 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 38 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 92
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 93 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 152
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 153 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 9/166 (5%)
Query: 142 QGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FGK L + G A+KIL++ + A L +HP +
Sbjct: 20 KGTFGKVILVKEKATGRYYAMKILKK---EVIVAKDEVAHTLTENRVLQNSRHPFLTALK 76
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVH-RLGLIH 258
+ + C V EYA GG + F + R A ++ + Y+H +++
Sbjct: 77 YSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVY 134
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQT-EGMTPETGTYRWMAP 303
RDLK +NL++ D IKI DFG+ + ++ M GT ++AP
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAP 180
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 30 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 84
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 144
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 145 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 30 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 84
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 85 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 144
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 145 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 20 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 74
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 135 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 12/176 (6%)
Query: 136 MGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHP 193
MG+ G F + R G+E A K +++ + L ++HP
Sbjct: 16 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHP 75
Query: 194 NIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSV-PLKLAVKQALDVARGMAYVH 252
NI+ ++ E GG + FL ++++ + +KQ LD G+ Y+H
Sbjct: 76 NIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---GVHYLH 132
Query: 253 RLGLIHRDLKSDNLLIFS----DKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
+ H DLK +N+++ + IK+ DFG+A +IE E GT ++AP
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGTPEFVAP 187
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 41 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 95
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 96 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 155
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 156 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEY 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 24 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 78
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 79 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 138
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 139 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 109
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 20 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 74
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 135 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 20 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 74
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 75 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 134
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 135 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 17/184 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 25 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 79
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 139
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYR 299
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR + MT T
Sbjct: 140 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRW 194
Query: 300 WMAP 303
+ AP
Sbjct: 195 YRAP 198
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 109
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL---CGTPEYLAP 208
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLK---QIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLK---QIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI---EVQTEGMTPETGTYRW 300
+ RG+ Y+H ++HRDLK NLL+ + +KI DFG+AR+ + G E RW
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 101
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 200
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 17/184 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 25 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 79
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 139
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYR 299
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR + MT T
Sbjct: 140 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRW 194
Query: 300 WMAP 303
+ AP
Sbjct: 195 YRAP 198
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 17/184 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYR 299
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR + MT T
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMTGXVATRW 187
Query: 300 WMAP 303
+ AP
Sbjct: 188 YRAP 191
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 17/184 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 25 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 79
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 139
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYR 299
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR + MT T
Sbjct: 140 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTADEMTGYVATRW 194
Query: 300 WMAP 303
+ AP
Sbjct: 195 YRAP 198
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 29 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 83
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 84 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 143
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 144 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 93
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NL+I I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 17/161 (10%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXX 183
++TID ++ +G FG +Y R N +A+K+L + + + E
Sbjct: 10 KFTID--DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 184 XXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKR----QNRSVPLKLAVK 239
+ L+HPNI+R ++ E+A G + + L K + RS
Sbjct: 68 Q---SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF----- 119
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
++A + Y H +IHRD+K +NLL+ +KIADFG
Sbjct: 120 -MEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 94
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 152
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL---CGTPEYLAP 193
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 23 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 77
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 137
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 138 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 17 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 71
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 72 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 131
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 132 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 25 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 79
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 80 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 139
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 140 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 109
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 74/164 (45%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 53 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 109
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + S P A A + Y+H L LI+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPH--ARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 16 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 70
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 71 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 130
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 131 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 23 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 77
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 78 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 137
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 138 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 15 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 69
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 129
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 130 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
A L P IV GA R+ I E +GGS+ Q + +Q +P A+ G
Sbjct: 119 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEG 176
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKS-IKIADFGVARIEVQTEGM 291
+ Y+H ++H D+K+DN+L+ SD S + DFG A + +Q +G+
Sbjct: 177 LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGL 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 14 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 68
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 128
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 129 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 15 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 69
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 70 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 129
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 130 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V EYA GG + L + P A A + Y+H L LI+RDLK +NL+I
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID 176
Query: 270 SDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
IK+ DFG A R++ +T + GT ++AP
Sbjct: 177 QQGYIKVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V +Y GG + L+K ++R +P ++A ++ + VH+L +HRD+K DN+L+
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
Query: 270 SDKSIKIADFG--VARIEVQTEGMTPETGTYRWMAP 303
+ I++ADFG + +E T + GT +++P
Sbjct: 210 MNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISP 245
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 65 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
A L P IV GA R+ I E +GGS+ Q + +Q +P A+ G
Sbjct: 105 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEG 162
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKS-IKIADFGVARIEVQTEGM 291
+ Y+H ++H D+K+DN+L+ SD S + DFG A + +Q +G+
Sbjct: 163 LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGL 206
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 43 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 14 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 68
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + + ++ +
Sbjct: 69 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIY 128
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 129 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 43 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 92
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 93 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 153 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 203
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Query: 143 GAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
GA+G + +GE+VAIK L RP ++ L ++H N++ +
Sbjct: 35 GAYGSVCSAIDKRSGEKVAIKKLSRPF----QSEIFAKRAYRELLLLKHMQHENVIGLLD 90
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ----ALDVARGMAYVHRLGL 256
+ + V F+ + + LK + ++ + +G+ Y+H G+
Sbjct: 91 VFTPA---SSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGV 147
Query: 257 IHRDLKSDNLLIFSDKSIKIADFGVAR 283
+HRDLK NL + D +KI DFG+AR
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 110 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 159
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 160 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTE 289
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E
Sbjct: 220 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 256
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 39 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 88
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 89 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 149 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 199
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 50 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 99
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 100 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 160 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 210
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 93
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + + P A A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 35 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 84
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 85 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 145 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 195
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+ RG+ Y+H +IHRDLK NL + D +KI DFG+AR
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
L LKH NIVR +V E+ + F N + ++ + +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF--DSCNGDLDPEIVKSFLFQLLK 112
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
G+ + H ++HRDLK NLLI + +K+ADFG+AR
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 218 GSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYV-HRLGLIHRDLKSDNLLIFSDKSIKI 276
G+ + L KR +P ++ K + + + + Y+ + G+IHRD+K N+L+ IK+
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
Query: 277 ADFGVARIEVQTEGMTPETGTYRWMAP 303
DFG++ V + G +MAP
Sbjct: 167 CDFGISGRLVDDKAKDRSAGCAAYMAP 193
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 69 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 118
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 119 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTE 289
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E
Sbjct: 179 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 215
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
A L P IV GA R+ I E +GGS+ Q + ++ +P A+
Sbjct: 139 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALE 196
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS-IKIADFGVARIEVQTEGM 291
G+ Y+H ++H D+K+DN+L+ SD S + DFG A + +Q +G+
Sbjct: 197 GLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGL 241
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 58 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 114
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + P A A +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIV 172
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 173 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 228
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 59 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 108
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 109 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTE 289
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E
Sbjct: 169 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 205
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 32 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 142 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 192
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 67 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 116
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 117 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTE 289
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E
Sbjct: 177 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 213
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 4/105 (3%)
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
A L P IV GA R+ I E +GGS+ Q + +Q +P A+ G
Sbjct: 121 AGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEG 178
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKS-IKIADFGVARIEVQTEGM 291
+ Y+H ++H D+K+DN+L+ SD S + DFG A + +Q +G+
Sbjct: 179 LEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHA-LCLQPDGL 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 44 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 93
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 94 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 154 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 204
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 36 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 85
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 86 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTE 289
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E
Sbjct: 146 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 182
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 65 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 114
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 115 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTE 289
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E
Sbjct: 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 188 ATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARG 247
A L P IV GA R+ I E +GGS+ Q + ++ +P A+ G
Sbjct: 121 AGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRALYYLGQALEG 178
Query: 248 MAYVHRLGLIHRDLKSDNLLIFSDKS-IKIADFGVARIEVQTEGMTPE--TGTY 298
+ Y+H ++H D+K+DN+L+ SD S + DFG A + +Q +G+ + TG Y
Sbjct: 179 LEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHA-VCLQPDGLGKDLLTGDY 231
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 187 LATLKHPNIVRFIGAC-RKPMVW-CI-VTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
+ T+ P V F GA R+ VW C+ + + + +Q + K Q ++P + K A+
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQ--TIPEDILGKIAVS 117
Query: 244 VARGMAYVH-RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMA 302
+ + + ++H +L +IHRD+K N+LI + +K+ DFG++ V + G +MA
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMA 177
Query: 303 P 303
P
Sbjct: 178 P 178
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 209 CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLI 268
C+V GG ++ + P AV A ++ G+ +HR +++RDLK +N+L+
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 269 FSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
I+I+D G+A + + + GT +MAP
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 93
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + P A A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 32 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 89
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + P A A +
Sbjct: 90 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIV 146
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 147 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 202
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 94
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + P A A +
Sbjct: 95 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 234 LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
++ V Q L +G+ Y+H G+IHRDLK NL + D +KI DFG+AR
Sbjct: 130 IQFLVYQML---KGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 76/172 (44%), Gaps = 10/172 (5%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKR 93
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + S P A A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGM--TPE 294
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + TPE
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE 203
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 11/179 (6%)
Query: 128 TIDLRKLNMGDAFAQGAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXX 185
T L + + G+FG+ L + +G A+KIL++ + K
Sbjct: 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRI-- 94
Query: 186 XLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L + P +V+ + + +V EY GG + L + P A A +
Sbjct: 95 -LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPH--ARFYAAQIV 151
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
Y+H L LI+RDLK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 152 LTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 209 CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLI 268
C+V GG ++ + P AV A ++ G+ +HR +++RDLK +N+L+
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 269 FSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
I+I+D G+A + + + GT +MAP
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAP 354
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)
Query: 143 GAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF-- 198
G+FG +Y+ +GE VAIK K + L H NIVR
Sbjct: 31 GSFGVVYQAKLCDSGELVAIK----------KVLQGKAFKNRELQIMRKLDHCNIVRLRY 80
Query: 199 ----IGACRKPMVWCIVTEYAKGGSVRQFL-TKRQNRSVPLKLAVKQALDVARGMAYVHR 253
G + + +V +Y R R +++P+ + R +AY+H
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 254 LGLIHRDLKSDNLLIFSDKSI-KIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ HRD+K NLL+ D ++ K+ DFG A+ V+ E + + AP
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 6 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 117
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 6 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 59
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 60 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 117
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+G+ Y+H G++HRDLK NL + D +KI DFG+AR
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI D+G+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 34/176 (19%)
Query: 143 GAFGKLYRGTYNGE--EVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G++ + R + E A+K++++ + DP + L +HPNI+
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL---------LRYGQHPNIITLKD 88
Query: 201 ACRKPMVWCIVTEYAKGGSV------RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+VTE +GG + ++F ++R+ V + + + Y+H
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV--------LHTIGKTVEYLHSQ 140
Query: 255 GLIHRDLKSDNLLIFSD----KSIKIADFGVARIEVQTEG---MTPETGTYRWMAP 303
G++HRDLK N+L + + ++I DFG A+ +++ E MTP T ++AP
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMTP-CYTANFVAP 194
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 140 FAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVR 197
+G +G++Y+ T E VAIK + R E++ E L L+H NI+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI-RLEHEEEGVPGTAIREVSL---LKELQHRNIIE 97
Query: 198 FIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLI 257
++ EYA+ +++++ K N V +++ + G+ + H +
Sbjct: 98 LKSVIHHNHRLHLIFEYAEN-DLKKYMDK--NPDVSMRVIKSFLYQLINGVNFCHSRRCL 154
Query: 258 HRDLKSDNLLI-FSDKS----IKIADFGVAR 283
HRDLK NLL+ SD S +KI DFG+AR
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Query: 223 FLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA 282
FLT++ +++ L + G ++H G+IHRDLK N L+ D S+KI DFG+A
Sbjct: 127 FLTEQHVKTILYNLLL--------GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
Query: 283 R 283
R
Sbjct: 179 R 179
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 45 GSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 101
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + P A A + Y+H L LI+RD
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRD 159
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 200
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
RG+ Y+H +IHRDLK NLL+ + +KI DFG+AR
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 53 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 109
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + P A A + Y+H L LI+RD
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 143 GAFGK--LYRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G+FG+ L + G A+KIL++ + K L + P +V+
Sbjct: 52 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI---LQAVNFPFLVKLEF 108
Query: 201 ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRD 260
+ + +V EY GG + L + P A A + Y+H L LI+RD
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPH--ARFYAAQIVLTFEYLHSLDLIYRD 166
Query: 261 LKSDNLLIFSDKSIKIADFGVA-RIEVQTEGMTPETGTYRWMAP 303
LK +NLLI I++ DFG A R++ +T + GT ++AP
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL---CGTPEYLAP 207
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 80/176 (45%), Gaps = 34/176 (19%)
Query: 143 GAFGKLYRGTYNGE--EVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIG 200
G++ + R + E A+K++++ + DP + L +HPNI+
Sbjct: 38 GSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL---------LRYGQHPNIITLKD 88
Query: 201 ACRKPMVWCIVTEYAKGGSV------RQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRL 254
+VTE +GG + ++F ++R+ V + + + Y+H
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFV--------LHTIGKTVEYLHSQ 140
Query: 255 GLIHRDLKSDNLLIFSD----KSIKIADFGVARIEVQTEG---MTPETGTYRWMAP 303
G++HRDLK N+L + + ++I DFG A+ +++ E MTP T ++AP
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAK-QLRAENGLLMTP-CYTANFVAP 194
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 14/167 (8%)
Query: 122 ENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXXXX 179
EN D++ + G+ G F K R G + A K +++ +
Sbjct: 7 ENVDDY------YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED 60
Query: 180 XXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L ++HPN++ ++ E GG + FL +++ S+ + A +
Sbjct: 61 IEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFS----DKSIKIADFGVA 282
+ G+ Y+H L + H DLK +N+++ IKI DFG+A
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 238 VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGT 297
+ + VARGM ++ IHRDL + N+L+ + +KI DFG+AR + + T
Sbjct: 202 ISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 298 ---YRWMAP 303
+WMAP
Sbjct: 262 RLPLKWMAP 270
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 20/116 (17%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRGTYNG-------EEVAIKILERPENDPEKAXXXXX 178
+W +L +G + +GAFGK+ + + G VA+K+L+ E A
Sbjct: 21 KWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLK------EGATASEY 74
Query: 179 XXXXXXXXLATL--KHPNIVRFIGACRK---PMVWCIVTEYAKGGSVRQFLTKRQN 229
+ T H N+V +GAC K P++ ++ EY K G++ +L +++
Sbjct: 75 KALMTELKILTHIGHHLNVVNLLGACTKQGGPLM--VIVEYCKYGNLSNYLKSKRD 128
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLL--IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGE 172
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
I+ E +GG + + +R +++ + A + D+ + ++H + HRD+K +NLL
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 270 S---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
S D +K+ DFG A+ Q TP Y ++AP
Sbjct: 163 SKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAP 198
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
RG+ Y+H +IHRDLK NLL+ + +KI DFG+AR
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGHRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI DF +AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
I+ E +GG + + +R +++ + A + D+ + ++H + HRD+K +NLL
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 270 S---DKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
S D +K+ DFG A+ Q TP Y ++AP
Sbjct: 144 SKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-YVAP 179
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 83/222 (37%), Gaps = 54/222 (24%)
Query: 132 RKLNMGDAFAQGAFGKLYRGTYNGEEV--AIKILERP---ENDPEKAXXXXXXXXXXXXX 186
+K ++ A QG++G + N AIKI+ + + +P+
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRL---- 81
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFL---------------TKRQNRS 231
+ L HPNI R C+V E GG + L K Q
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 232 VP-----------------LKLAVKQAL------DVARGMAYVHRLGLIHRDLKSDNLLI 268
P L ++ L + + Y+H G+ HRD+K +N L
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 269 FSDKS--IKIADFGVARIEVQTE-----GMTPETGTYRWMAP 303
++KS IK+ DFG+++ + GMT + GT ++AP
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 79/188 (42%), Gaps = 27/188 (14%)
Query: 134 LNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
+ +GA+G + T+ GE VAIK +E P + P A L K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKI----LKHFK 67
Query: 192 HPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ I ++P + + + + + ++ + ++ + Q L R
Sbjct: 68 HENIIT-IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL---R 123
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-----------EVQTEGMTPET 295
+ +H +IHRDLK NLLI S+ +K+ DFG+ARI Q GMT
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXV 183
Query: 296 GTYRWMAP 303
T + AP
Sbjct: 184 ATRWYRAP 191
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
L LKH NIVR +V E+ + F N + ++ + +
Sbjct: 55 LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF--DSCNGDLDPEIVKSFLFQLLK 112
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
G+ + H ++HRDLK NLLI + +K+A+FG+AR
Sbjct: 113 GLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLL-- 267
++ EYA GG + V ++ + G+ Y+H+ ++H DLK N+L
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 268 -IFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
I+ IKI DFG++R + GT ++AP
Sbjct: 166 SIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAP 202
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 85 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 142
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 143 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 202
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 121 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 178
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 179 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 238
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 80/189 (42%), Gaps = 29/189 (15%)
Query: 134 LNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
+ +GA+G + T+ GE VAIK +E P + P A L K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKI----LKHFK 67
Query: 192 HPNIVRFIGACRKPMVW------CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
H NI+ I ++P + I+ E + R T+ + ++ + Q L
Sbjct: 68 HENIIT-IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDH-IQYFIYQTL--- 122
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI-----------EVQTEGMTPE 294
R + +H +IHRDLK NLLI S+ +K+ DFG+ARI Q GMT
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 295 TGTYRWMAP 303
T + AP
Sbjct: 183 VATRWYRAP 191
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 77 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 134
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 135 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 194
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQN-RSVPLKLAVKQALDVARGM 248
L+HP +V + + +V + GG +R L + + + +KL + ++ +
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI---CELVMAL 128
Query: 249 AYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
Y+ +IHRD+K DN+L+ + I DF +A + + +T GT +MAP
Sbjct: 129 DYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAP 183
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 232
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 69 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 186
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 69 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 126
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 127 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAP 186
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 75 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 132
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 133 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 192
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 70 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 127
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 128 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 187
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 188
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 11/120 (9%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 76 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 133
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ Y+H + + HRD+K +NLL S + +K+ DFG A+ +T T ++AP
Sbjct: 134 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAP 193
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 223 FLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVA 282
FLT+ +++ L + G ++H G+IHRDLK N L+ D S+K+ DFG+A
Sbjct: 125 FLTEEHIKTILYNLLL--------GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
Query: 283 R 283
R
Sbjct: 177 R 177
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 78/186 (41%), Gaps = 28/186 (15%)
Query: 134 LNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
+G G FG+L G Y E VAIK+ P+ L +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ-----LHLEYRFYKQLGSGD 65
Query: 192 HPNIVRFIGACRK--PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
V + G C K MV ++ G + L +R+ LK + A+ + M
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL------GPSLEDLFDLCDRTFSLKTVLMIAIQLISRME 119
Query: 250 YVHRLGLIHRDLKSDNLLI-----FSDKSIKIADFGVAR--IEVQTEGMTPE------TG 296
YVH LI+RD+K +N LI + + I I DFG+A+ I+ +T+ P TG
Sbjct: 120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTG 179
Query: 297 TYRWMA 302
T R+M+
Sbjct: 180 TARYMS 185
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI FG+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 138 DAFAQGAFGKL-YRGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIV 196
D GA G + YRG ++ +VA+K + PE + +HPN++
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRI-LPE-------CFSFADREVQLLRESDEHPNVI 81
Query: 197 RFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGL 256
R+ + I E ++++++ ++ + L+ + G+A++H L +
Sbjct: 82 RYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLHSLNI 139
Query: 257 IHRDLKSDNLLIFSDKS---IK--IADFGVA-RIEVQTEGMTPET---GTYRWMAP 303
+HRDLK N+LI + IK I+DFG+ ++ V + + GT W+AP
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 16/158 (10%)
Query: 134 LNMGDAFAQGAFGKLYRGTY--NGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
+ +GA+G + T+ GE VAIK +E P + P A L K
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE-PFDKPLFALRTLREIKI----LKHFK 67
Query: 192 HPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
H NI+ I ++P + + + + + ++ + ++ + Q L R
Sbjct: 68 HENIIT-IFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTL---R 123
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARI 284
+ +H +IHRDLK NLLI S+ +K+ DFG+ARI
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI D G+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 187 LATLKHPNIVRFIGAC--RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
L L+H N+++ + + +V EY G +++ L + P+ A +
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQL 118
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
G+ Y+H G++H+D+K NLL+ + ++KI+ GVA
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V +Y GG + L+K +++ +P +A ++ + +H+L +HRD+K DN+L+
Sbjct: 167 LVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 225
Query: 270 SDKSIKIADFG 280
+ I++ADFG
Sbjct: 226 VNGHIRLADFG 236
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V +Y GG + L+K +++ +P +A ++ + +H+L +HRD+K DN+L+
Sbjct: 151 LVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 209
Query: 270 SDKSIKIADFG 280
+ I++ADFG
Sbjct: 210 VNGHIRLADFG 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 193 PNIVRFIGAC-RKPMVW-CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAY 250
P IV+F GA R+ W C+ +++ + +P ++ K L + + +
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 251 VHR-LGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ L +IHRD+K N+L+ +IK+ DFG++ V + T + G +MAP
Sbjct: 141 LKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAP 194
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI D G+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 9/156 (5%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
+TID +G +G FG +Y R + VA+K+L + + + E
Sbjct: 20 FTID--DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDV 244
A L HPNI+R ++ EYA G + + L K + + L
Sbjct: 78 ---AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEEL-- 132
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
A + Y H +IHRD+K +NLL+ +KIADFG
Sbjct: 133 ADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFS-DKSIKIADFGVARI 284
+ RG+ Y+H ++HRDLK NL I + D +KI DFG+ARI
Sbjct: 129 LLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V E +GGS+ + KR++ + V Q DVA + ++H G+ HRDLK +N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ--DVASALDFLHNKGIAHRDLKPENILCE 145
Query: 270 SD---KSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 303
+KI DFG+ + T + G+ +MAP
Sbjct: 146 HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 15/164 (9%)
Query: 127 WTIDLRKLNMGDAFAQGAFGKLYRG--TYNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
W + R N+ GA+G + T G VA+K L RP ++
Sbjct: 18 WEVPERYQNLS-PVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF----QSIIHAKRTYREL 72
Query: 185 XXLATLKHPNIVRFIGACRKPMVW-----CIVTEYAKGGSVRQFLTKRQNRSVPLKLAVK 239
L +KH N++ + + + G + + ++ ++ +
Sbjct: 73 RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIY 132
Query: 240 QALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
Q L RG+ Y+H +IHRDLK NL + D +KI D G+AR
Sbjct: 133 QIL---RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 229 NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLI-----FSDKSIKIADFGVAR 283
+R+ LK + A+ + M YVH LI+RD+K +N LI + I I DFG+A+
Sbjct: 91 DRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
Query: 284 --IEVQTEGMTPE------TGTYRWMA 302
I+ +T+ P TGT R+M+
Sbjct: 151 EYIDPETKKHIPYREHKSLTGTARYMS 177
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXX 177
G+E F + ++ ++G+ G F K R G E A K +++ ++ +
Sbjct: 1 GMEPFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR 59
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L + H N++ ++ E GG + FL ++++ S +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 238 -VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS-----IKIADFGVA 282
+KQ LD G+ Y+H + H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXX 177
G+E F + ++ ++G+ G F K R G E A K +++ ++ +
Sbjct: 1 GMEPFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR 59
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L + H N++ ++ E GG + FL ++++ S +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 238 -VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS-----IKIADFGVA 282
+KQ LD G+ Y+H + H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLA 166
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 6/119 (5%)
Query: 189 TLKHPNIVRFIGAC-RKPMVWCI--VTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
T+ P V F GA R+ VW + + + +Q + K Q ++P + K A+ +
Sbjct: 89 TVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQ--TIPEDILGKIAVSIV 146
Query: 246 RGMAYVH-RLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
+ + ++H +L +IHRD+K N+LI + +K DFG++ V + G + AP
Sbjct: 147 KALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAP 205
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXX 177
G+E F + ++ ++G+ G F K R G E A K +++ ++ +
Sbjct: 1 GMEPFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR 59
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L + H N++ ++ E GG + FL ++++ S +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 238 -VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS-----IKIADFGVA 282
+KQ LD G+ Y+H + H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLA 166
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXX 177
G+E F + ++ ++G+ G F K R G E A K +++ ++ +
Sbjct: 1 GMEPFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR 59
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L + H N++ ++ E GG + FL ++++ S +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 238 -VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS-----IKIADFGVA 282
+KQ LD G+ Y+H + H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLA 166
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Query: 210 IVTEYAKGGSVRQF------LTKRQNRSVPLKLAVKQALDVARGMAYVH-RLGLIHRDLK 262
I+ EY + S+ +F L K +P+++ V +Y+H + HRD+K
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179
Query: 263 SDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
N+L+ + +K++DFG + V + + GTY +M P
Sbjct: 180 PSNILMDKNGRVKLSDFGESEYMVD-KKIKGSRGTYEFMPP 219
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 120 GLENFDEWTIDLRKLNMGDAFAQGAFG--KLYRGTYNGEEVAIKILERPENDPEKAXXXX 177
G+E F + ++ ++G+ G F K R G E A K +++ ++ +
Sbjct: 1 GMEPFKQQKVE-DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSR 59
Query: 178 XXXXXXXXXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLA 237
L + H N++ ++ E GG + FL ++++ S +
Sbjct: 60 EEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 238 -VKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS-----IKIADFGVA 282
+KQ LD G+ Y+H + H DLK +N+++ DK+ IK+ DFG+A
Sbjct: 120 FIKQILD---GVNYLHTKKIAHFDLKPENIMLL-DKNIPIPHIKLIDFGLA 166
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 209 CIVTEYAKGGSVRQFL--TKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
C+V GG +R + N A+ + G+ ++H+ +I+RDLK +N+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 267 LIFSDKSIKIADFGVARIEVQTEGMTPE---TGTYRWMAP 303
L+ D +++I+D G+A +E++ G T GT +MAP
Sbjct: 321 LLDDDGNVRISDLGLA-VELKA-GQTKTKGYAGTPGFMAP 358
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 209 CIVTEYAKGGSVRQFL--TKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
C+V GG +R + N A+ + G+ ++H+ +I+RDLK +N+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 267 LIFSDKSIKIADFGVARIEVQTEGMTPE---TGTYRWMAP 303
L+ D +++I+D G+A +E++ G T GT +MAP
Sbjct: 321 LLDDDGNVRISDLGLA-VELKA-GQTKTKGYAGTPGFMAP 358
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
Query: 134 LNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
+G G FG+L G Y E VAIK+ P+ L +
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ-----LHLEYRFYKQLGSGD 86
Query: 192 HPNIVRFIGACRK--PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
V + G C K MV ++ G + L +R+ LK + A+ + M
Sbjct: 87 GIPQVYYFGPCGKYNAMVLELL------GPSLEDLFDLCDRTFSLKTVLMIAIQLISRME 140
Query: 250 YVHRLGLIHRDLKSDNLLI-----FSDKSIKIADFGVAR--IEVQTEGMTPE------TG 296
YVH LI+RD+K +N LI + + I I DF +A+ I+ +T+ P TG
Sbjct: 141 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTG 200
Query: 297 TYRWMA 302
T R+M+
Sbjct: 201 TARYMS 206
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 209 CIVTEYAKGGSVRQFL--TKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
C+V GG +R + N A+ + G+ ++H+ +I+RDLK +N+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 267 LIFSDKSIKIADFGVARIEVQTEGMTPE---TGTYRWMAP 303
L+ D +++I+D G+A +E++ G T GT +MAP
Sbjct: 321 LLDDDGNVRISDLGLA-VELKA-GQTKTKGYAGTPGFMAP 358
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 13/87 (14%)
Query: 229 NRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLI-----FSDKSIKIADFGVAR 283
+R+ LK + A+ + M YVH LI+RD+K +N L+ +I I DFG+A+
Sbjct: 94 DRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAK 153
Query: 284 --IEVQTEGMTPE------TGTYRWMA 302
I+ +T+ P TGT R+M+
Sbjct: 154 EYIDPETKKHIPYREHKSLTGTARYMS 180
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 209 CIVTEYAKGGSVRQFL--TKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNL 266
C+V GG +R + N A+ + G+ ++H+ +I+RDLK +N+
Sbjct: 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320
Query: 267 LIFSDKSIKIADFGVARIEVQTEGMTPE---TGTYRWMAP 303
L+ D +++I+D G+A +E++ G T GT +MAP
Sbjct: 321 LLDDDGNVRISDLGLA-VELKA-GQTKTKGYAGTPGFMAP 358
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
Query: 187 LATLKHPNIVRFIGACRKPMVWCIVTE-YAKGGSVRQFLTKRQNRSVPLKLAVKQALDVA 245
L+ ++H NI++ + + +V E + G + F+ + PL + + L A
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSA 142
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G Y+ +IHRD+K +N++I D +IK+ DFG A + + GT + AP
Sbjct: 143 VG--YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAP 198
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 30/38 (78%)
Query: 246 RGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVAR 283
+G+ Y+H+ ++HRDLK +NLL+ + +K+ADFG+A+
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
Query: 134 LNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLK 191
+G G FG+L G Y E VAIK+ P+ L +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ-----LHLEYRFYKQLGSGD 65
Query: 192 HPNIVRFIGACRK--PMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMA 249
V + G C K MV ++ G + L +R+ LK + A+ + M
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL------GPSLEDLFDLCDRTFSLKTVLMIAIQLISRME 119
Query: 250 YVHRLGLIHRDLKSDNLLI-----FSDKSIKIADFGVAR--IEVQTEGMTPE------TG 296
YVH LI+RD+K +N LI + + I I DF +A+ I+ +T+ P TG
Sbjct: 120 YVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTG 179
Query: 297 TYRWMA 302
T R+M+
Sbjct: 180 TARYMS 185
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 234 LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP 293
L+ + + VA+GM ++ IHRDL + N+L+ +KI DFG+AR ++ +
Sbjct: 190 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYV 248
Query: 294 ETGTYR----WMAP 303
G R WMAP
Sbjct: 249 RKGDARLPLKWMAP 262
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 12/118 (10%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 14 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 69
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP-MVWCIVTEYAKGGSVRQFLTKRQNRSVPLK 235
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 127
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 193 PNIVRFIG------ACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR 246
P+IVR + A RK ++ IV E GG + + R +++ + A + +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLL--IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 128
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVAR 283
+ Y+H + + HRD+K +NLL S + +K+ DFG A+
Sbjct: 129 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 234 LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP 293
L+ + + VA+GM ++ IHRDL + N+L+ +KI DFG+AR ++ +
Sbjct: 199 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYV 257
Query: 294 ETGTYR----WMAP 303
G R WMAP
Sbjct: 258 RKGDARLPLKWMAP 271
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 12/118 (10%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 78
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP-MVWCIVTEYAKGGSVRQFLTKRQNRSVPLK 235
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 136
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 234 LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP 293
L+ + + VA+GM ++ IHRDL + N+L+ +KI DFG+AR ++ +
Sbjct: 197 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYV 255
Query: 294 ETGTYR----WMAP 303
G R WMAP
Sbjct: 256 RKGDARLPLKWMAP 269
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 12/118 (10%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 76
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP-MVWCIVTEYAKGGSVRQFLTKRQNRSVPLK 235
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 234 LKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP 293
L+ + + VA+GM ++ IHRDL + N+L+ +KI DFG+AR ++ +
Sbjct: 192 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYV 250
Query: 294 ETGTYR----WMAP 303
G R WMAP
Sbjct: 251 RKGDARLPLKWMAP 264
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 12/118 (10%)
Query: 126 EWTIDLRKLNMGDAFAQGAFGKLYRG-------TYNGEEVAIKILERPENDPEKAXXXXX 178
+W +L +G +GAFG++ T VA+K+L+ E
Sbjct: 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEH----RA 71
Query: 179 XXXXXXXXLATLKHPNIVRFIGACRKP-MVWCIVTEYAKGGSVRQFLTKRQNRSVPLK 235
+ H N+V +GAC KP ++ E+ K G++ +L ++N VP K
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 129
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 242 LDVARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEG----MTP---- 293
+ +A + ++H GL+HRDLK N+ D +K+ DFG+ Q E +TP
Sbjct: 171 IQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAY 230
Query: 294 -----ETGTYRWMAP 303
+ GT +M+P
Sbjct: 231 ATHXGQVGTKLYMSP 245
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAV-----KQALDV 244
LKHP+IV + + +V E+ G + + KR + AV +Q L+
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTP--ETGTYR 299
R Y H +IHRD+K +L+ S ++ +K+ FGVA I++ G+ GT
Sbjct: 145 LR---YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPH 200
Query: 300 WMAP 303
+MAP
Sbjct: 201 FMAP 204
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 131 LRKLNMGDAFAQGAFGKLYRGT--YNGEEVAIK-ILERPENDPEKAXXXXXXXXXXXXXL 187
LRK + +GA+G +++ GE VA+K I + +N + L
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTD-----AQRTFREIMIL 62
Query: 188 ATLK-HPNIVRFIGACRKPM---VWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALD 243
L H NIV + R V+ +V +Y + + + V + V Q +
Sbjct: 63 TELSGHENIVNLLNVLRADNDRDVY-LVFDYMET-DLHAVIRANILEPVHKQYVVYQLIK 120
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMT 292
V + Y+H GL+HRD+K N+L+ ++ +K+ADFG++R V +T
Sbjct: 121 VIK---YLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT 166
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAV-----KQALDV 244
LKHP+IV + + +V E+ G + + KR + AV +Q L+
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 245 ARGMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVARIEVQTEGMTP--ETGTYR 299
R Y H +IHRD+K +L+ S ++ +K+ FGVA I++ G+ GT
Sbjct: 143 LR---YCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPH 198
Query: 300 WMAP 303
+MAP
Sbjct: 199 FMAP 202
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAY 250
+HP VR A + + + TE G S++Q + S+P D +A+
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQH-CEAWGASLPEAQVWGYLRDTLLALAH 172
Query: 251 VHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTP-ETGTYRWMAP 303
+H GL+H D+K N+ + K+ DFG+ +E+ T G + G R+MAP
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAGEVQEGDPRYMAP 225
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ--ALDVARGM 248
+H ++VR+ A + I EY GGS+ +++ K A + L V RG+
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 249 AYVHRLGLIHRDLKSDNLLI 268
Y+H + L+H D+K N+ I
Sbjct: 125 RYIHSMSLVHMDIKPSNIFI 144
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 24/182 (13%)
Query: 136 MGDAFAQGAFGKLYRGTY--NGEEVAIKILE-----RPENDPEKAXXXXXXXXXXXXXLA 188
+ D QGA ++RG + G+ AIK+ RP + L
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD----------VQMREFEVLK 62
Query: 189 TLKHPNIVRFIGACRKPMVW--CIVTEYAKGGSVRQFLTKRQN-RSVPLKLAVKQALDVA 245
L H NIV+ + ++ E+ GS+ L + N +P + DV
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 246 RGMAYVHRLGLIHRDLKSDNLL--IFSD-KSI-KIADFGVARIEVQTEGMTPETGTYRWM 301
GM ++ G++HR++K N++ I D +S+ K+ DFG AR E GT ++
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYL 182
Query: 302 AP 303
P
Sbjct: 183 HP 184
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ--ALDVARGM 248
+H ++VR+ A + I EY GGS+ +++ K A + L V RG+
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 249 AYVHRLGLIHRDLKSDNLLI 268
Y+H + L+H D+K N+ I
Sbjct: 129 RYIHSMSLVHMDIKPSNIFI 148
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 75/182 (41%), Gaps = 24/182 (13%)
Query: 136 MGDAFAQGAFGKLYRGTY--NGEEVAIKILE-----RPENDPEKAXXXXXXXXXXXXXLA 188
+ D QGA ++RG + G+ AIK+ RP + L
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD----------VQMREFEVLK 62
Query: 189 TLKHPNIVRFIGACRKPMVW--CIVTEYAKGGSVRQFLTKRQN-RSVPLKLAVKQALDVA 245
L H NIV+ + ++ E+ GS+ L + N +P + DV
Sbjct: 63 KLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVV 122
Query: 246 RGMAYVHRLGLIHRDLKSDNLL--IFSD-KSI-KIADFGVARIEVQTEGMTPETGTYRWM 301
GM ++ G++HR++K N++ I D +S+ K+ DFG AR E GT ++
Sbjct: 123 GGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYL 182
Query: 302 AP 303
P
Sbjct: 183 HP 184
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ--ALDVARGM 248
+H ++VR+ A + I EY GGS+ +++ K A + L V RG+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 249 AYVHRLGLIHRDLKSDNLLI 268
Y+H + L+H D+K N+ I
Sbjct: 127 RYIHSMSLVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQ--ALDVARGM 248
+H ++VR+ A + I EY GGS+ +++ K A + L V RG+
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 249 AYVHRLGLIHRDLKSDNLLI 268
Y+H + L+H D+K N+ I
Sbjct: 127 RYIHSMSLVHMDIKPSNIFI 146
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 13/105 (12%)
Query: 210 IVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIF 269
+V E +GGS+ + KR++ + V Q DVA + ++H G+ HRDLK +N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQ--DVASALDFLHNKGIAHRDLKPENILCE 145
Query: 270 SD---KSIKIADFGVAR--------IEVQTEGMTPETGTYRWMAP 303
+KI DF + + T + G+ +MAP
Sbjct: 146 HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 18/113 (15%)
Query: 187 LATLKHPNIVR----FIG-ACRKPMVWCIVTEYAKGG--SVRQFLTKRQNRSVPLKLA-- 237
L LKHPN++ F+ A RK VW ++ +YA+ + +F + P++L
Sbjct: 72 LRELKHPNVISLQKVFLSHADRK--VW-LLFDYAEHDLWHIIKFHRASKANKKPVQLPRG 128
Query: 238 -VKQAL-DVARGMAYVHRLGLIHRDLKSDNLLIFSDKS----IKIADFGVARI 284
VK L + G+ Y+H ++HRDLK N+L+ + +KIAD G AR+
Sbjct: 129 MVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 181
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 60/152 (39%), Gaps = 30/152 (19%)
Query: 144 AFGKLYRGTYNGEEVAIK-ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFIGAC 202
++ L G ++G A+K IL + D E+A HPNI+R + C
Sbjct: 43 SYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHR-------LFNHPNILRLVAYC 95
Query: 203 -----RKPMVWCIVTEYAKGGSVRQ---------FLTKRQNRSVPLKLAVKQALDVARGM 248
K W ++ + +G + FLT+ Q + L + RG+
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQ--------ILWLLLGICRGL 147
Query: 249 AYVHRLGLIHRDLKSDNLLIFSDKSIKIADFG 280
+H G HRDLK N+L+ + + D G
Sbjct: 148 EAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 29/188 (15%)
Query: 134 LNMGDAFAQGAFGKLYRGT---------YNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
L ++ QG F K+++G + EV +K+L++ + ++
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM---- 65
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ L H ++V G C +V E+ K GS+ +L K +N ++ KL V + L
Sbjct: 66 --MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL- 122
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKS--------IKIADFGVARIEVQTEGMTPET 295
A M ++ LIH ++ + N+L+ ++ IK++D G++ I V + + E
Sbjct: 123 -AAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQE- 179
Query: 296 GTYRWMAP 303
W+ P
Sbjct: 180 -RIPWVPP 186
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 134 LNMGDAFAQGAFGKLYRGT---------YNGEEVAIKILERPENDPEKAXXXXXXXXXXX 184
L ++ QG F K+++G + EV +K+L++ + ++
Sbjct: 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM---- 65
Query: 185 XXLATLKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNR-SVPLKLAVKQALD 243
++ L H ++V G C +V E+ K GS+ +L K +N ++ KL V + L
Sbjct: 66 --MSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL- 122
Query: 244 VARGMAYVHRLGLIHRDLKSDNLLIFSDKS--------IKIADFGVA 282
A M ++ LIH ++ + N+L+ ++ IK++D G++
Sbjct: 123 -AWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 71/180 (39%), Gaps = 49/180 (27%)
Query: 128 TIDLR---KLNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXX 182
+++LR K +G G+FG +Y G +GEEVAIK+
Sbjct: 2 SMELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKL-------------------- 41
Query: 183 XXXXLATLKHPNI---VRFI----GACRKPMV-WC--------IVTEYAKGGSVRQFLTK 226
KHP + +F G P + WC +V E G + L
Sbjct: 42 ---ECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELL--GPSLEDLFN 96
Query: 227 RQNRSVPLKLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVAR 283
+R LK + A + + Y+H IHRD+K DN L+ K + I DFG+A+
Sbjct: 97 FCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 190 LKHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVAR--- 246
L HP ++ A ++ E+ GG + + K++ + ++ R
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAED-----YKMSEAEVINYMRQAC 159
Query: 247 -GMAYVHRLGLIHRDLKSDNLLIFSDK--SIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
G+ ++H ++H D+K +N++ + K S+KI DFG+A E + T T + AP
Sbjct: 160 EGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAP 219
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 46/172 (26%)
Query: 133 KLNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATL 190
+ +G G+FG +Y GT GEEVAIK+
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-----------------------ECVKT 46
Query: 191 KHPN------IVRFI-GACRKPMV-WC--------IVTEYAKGGSVRQFLTKRQNRSVPL 234
KHP I + + G P + WC +V E G + L +R L
Sbjct: 47 KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSL 104
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVAR 283
K + A + + Y+H IHRD+K DN L+ K + I DFG+A+
Sbjct: 105 KTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 66/172 (38%), Gaps = 46/172 (26%)
Query: 133 KLNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATL 190
+ +G G+FG +Y GT GEEVAIK+
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-----------------------ECVKT 44
Query: 191 KHPN------IVRFI-GACRKPMV-WC--------IVTEYAKGGSVRQFLTKRQNRSVPL 234
KHP I + + G P + WC +V E G + L +R L
Sbjct: 45 KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSL 102
Query: 235 KLAVKQALDVARGMAYVHRLGLIHRDLKSDNLLIFSDKS---IKIADFGVAR 283
K + A + + Y+H IHRD+K DN L+ K + I DFG+A+
Sbjct: 103 KTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 14/156 (8%)
Query: 133 KLNMGDAFAQGAFGKLYRGT--YNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATL 190
K +G G+FG++Y GT EEVAIK+ EN K
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL----ENVKTKHPQLLYESKIYRILQGGT 63
Query: 191 KHPNIVRFIGACRKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQALDVARGMAY 250
PN VR+ G + ++ G S+ L +R + LK + A + + +
Sbjct: 64 GIPN-VRWFGVEGD---YNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEF 118
Query: 251 VHRLGLIHRDLKSDNLLIFSDK---SIKIADFGVAR 283
VH +HRD+K DN L+ + + I DFG+A+
Sbjct: 119 VHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 22/156 (14%)
Query: 142 QGAFGKLYRGTY--NGEEVAIK-ILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRF 198
QG FG + G G VAIK +++ P LA L HPNIV+
Sbjct: 33 QGTFGTVQLGKEKSTGMSVAIKKVIQDPR--------FRNRELQIMQDLAVLHHPNIVQL 84
Query: 199 IGAC-------RKPMVWCIVTEYAKGGSVRQFLTKRQNRSVPLKLAVKQAL-DVARGMAY 250
R+ + +V EY R + + P + +K L + R +
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 251 VH--RLGLIHRDLKSDNLLI-FSDKSIKIADFGVAR 283
+H + + HRD+K N+L+ +D ++K+ DFG A+
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAK 180
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 76/200 (38%), Gaps = 46/200 (23%)
Query: 133 KLNMGDAFAQGAFGKLYRGTYN---GEEVAIKILERPENDPEKAXXXXXXXXXXXXXLAT 189
+ + D +GAFGK+ + G VA+KI++ + E A +
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE----------IQV 64
Query: 190 LKHPNIV--RFIGACRKPMVW-------CIVTEYAKGGSVRQFLTKRQNRSVPLKL--AV 238
L+H N C + + W CIV E G S F+ ++N +P +L
Sbjct: 65 LEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFI--KENGFLPFRLDHIR 121
Query: 239 KQALDVARGMAYVHRLGLIHRDLKSDNLLIFS-------------------DKSIKIADF 279
K A + + + ++H L H DLK +N+L + IK+ DF
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF 181
Query: 280 GVARIEVQTEGMTPETGTYR 299
G A + + T YR
Sbjct: 182 GSATYDDEHHSTLVSTRHYR 201
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 247 GMAYVHRLGLIHRDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRW 300
G+ +H G++HRDL N+L+ + I I DF +AR E + T+RW
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR-EDTADANKTHYVTHRW 198
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 73/165 (44%), Gaps = 7/165 (4%)
Query: 142 QGAFGKLY--RGTYNGEEVAIKILERPENDPEKAXXXXXXXXXXXXXLATLKHPNIVRFI 199
+G FG++Y R G+ A+K L++ ++ ++T P IV
Sbjct: 198 RGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMS 257
Query: 200 GACRKPMVWCIVTEYAKGGSVRQFLTKRQNRS-VPLKLAVKQALDVARGMAYVHRLGLIH 258
A P + + GG + L++ S ++ A ++ G+ ++H +++
Sbjct: 258 YAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY---AAEIILGLEHMHNRFVVY 314
Query: 259 RDLKSDNLLIFSDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 303
RDLK N+L+ ++I+D G+A + + GT+ +MAP
Sbjct: 315 RDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHGYMAP 358
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,931,254
Number of Sequences: 62578
Number of extensions: 353607
Number of successful extensions: 2557
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1037
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 724
Number of HSP's gapped (non-prelim): 1146
length of query: 303
length of database: 14,973,337
effective HSP length: 98
effective length of query: 205
effective length of database: 8,840,693
effective search space: 1812342065
effective search space used: 1812342065
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)