Query 046110
Match_columns 130
No_of_seqs 108 out of 1035
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 15:22:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046110hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ta6_A Triosephosphate isomera 100.0 1.5E-41 5.3E-46 276.2 9.3 108 18-129 143-252 (267)
2 2v5b_A Triosephosphate isomera 100.0 7E-41 2.4E-45 269.2 8.0 107 18-129 132-240 (244)
3 4g1k_A Triosephosphate isomera 100.0 2.1E-40 7.3E-45 270.2 9.2 104 18-129 163-268 (272)
4 3m9y_A Triosephosphate isomera 100.0 3.2E-40 1.1E-44 266.7 8.4 108 18-129 141-250 (254)
5 3kxq_A Triosephosphate isomera 100.0 3.3E-40 1.1E-44 269.4 8.5 106 18-129 163-269 (275)
6 1yya_A Triosephosphate isomera 100.0 9.7E-40 3.3E-44 263.4 9.4 108 18-129 137-246 (250)
7 1r2r_A TIM, triosephosphate is 100.0 1.7E-39 5.7E-44 261.8 9.7 109 18-130 138-246 (248)
8 2btm_A TIM, protein (triosepho 100.0 1.1E-39 3.9E-44 263.4 8.7 108 18-129 137-246 (252)
9 2i9e_A Triosephosphate isomera 100.0 2.2E-39 7.6E-44 262.6 9.6 109 18-130 137-245 (259)
10 1o5x_A TIM, triosephosphate is 100.0 2.4E-39 8.1E-44 260.9 9.7 107 18-129 138-244 (248)
11 3th6_A Triosephosphate isomera 100.0 2.3E-39 7.9E-44 261.1 9.3 108 18-130 138-245 (249)
12 3krs_A Triosephosphate isomera 100.0 3.3E-39 1.1E-43 263.0 9.9 107 18-129 161-267 (271)
13 1m6j_A TIM, TPI, triosephospha 100.0 2.6E-39 8.9E-44 262.2 8.9 108 18-129 145-254 (261)
14 3qst_A Triosephosphate isomera 100.0 3.6E-39 1.2E-43 260.8 9.6 107 18-129 140-248 (255)
15 1mo0_A TIM, triosephosphate is 100.0 3.3E-39 1.1E-43 263.5 9.4 108 18-129 157-264 (275)
16 2j27_A Triosephosphate isomera 100.0 3.9E-39 1.3E-43 259.9 9.6 107 18-129 138-246 (250)
17 2vxn_A Triosephosphate isomera 100.0 4.6E-39 1.6E-43 259.6 9.5 107 18-129 139-247 (251)
18 1tre_A Triosephosphate isomera 100.0 2.3E-39 7.9E-44 262.0 7.7 107 18-129 138-246 (255)
19 2yc6_A Triosephosphate isomera 100.0 2.8E-39 9.7E-44 261.7 7.4 107 18-129 139-249 (257)
20 1ney_A TIM, triosephosphate is 100.0 3.2E-39 1.1E-43 260.1 7.6 108 18-130 137-244 (247)
21 1aw2_A Triosephosphate isomera 100.0 3.9E-39 1.3E-43 260.7 7.9 107 18-129 140-248 (256)
22 1b9b_A TIM, protein (triosepho 100.0 2.5E-39 8.4E-44 261.9 6.4 109 18-130 139-251 (255)
23 3s6d_A Putative triosephosphat 100.0 6.6E-37 2.3E-41 253.4 5.0 108 17-129 195-302 (310)
24 2jgq_A Triosephosphate isomera 100.0 1.6E-35 5.3E-40 236.9 7.5 98 18-130 134-231 (233)
25 1hg3_A Triosephosphate isomera 99.9 2.8E-22 9.5E-27 159.0 5.6 79 38-129 137-218 (225)
26 1w0m_A TIM, triosephosphate is 99.8 3.1E-22 1.1E-26 158.9 4.4 79 38-129 134-215 (226)
27 2h6r_A Triosephosphate isomera 99.5 4.6E-15 1.6E-19 115.6 3.5 79 38-129 131-212 (219)
28 3hh8_A Metal ABC transporter s 89.1 2.1 7.3E-05 33.9 8.6 78 22-110 167-260 (294)
29 3ujp_A Mn transporter subunit; 88.4 2.5 8.6E-05 33.9 8.6 75 22-107 174-264 (307)
30 2p10_A MLL9387 protein; putati 86.0 1.4 4.9E-05 35.8 5.9 71 41-118 186-261 (286)
31 1xvl_A Mn transporter, MNTC pr 85.6 5.3 0.00018 32.0 9.1 75 22-107 188-278 (321)
32 3mfq_A TROA, high-affinity zin 85.0 2.6 8.9E-05 33.1 6.9 69 22-101 147-231 (282)
33 1toa_A Tromp-1, protein (perip 83.2 8 0.00027 30.8 9.1 69 22-101 181-265 (313)
34 1h1y_A D-ribulose-5-phosphate 82.8 1.8 6.3E-05 32.5 4.9 62 42-116 142-203 (228)
35 2ekc_A AQ_1548, tryptophan syn 82.4 1.2 4.1E-05 34.7 3.8 44 59-116 192-236 (262)
36 1ujp_A Tryptophan synthase alp 82.2 0.66 2.3E-05 36.7 2.3 30 83-117 202-232 (271)
37 1rd5_A Tryptophan synthase alp 82.1 1.8 6E-05 33.2 4.6 31 83-116 201-232 (262)
38 1rpx_A Protein (ribulose-phosp 81.7 2.9 0.0001 31.1 5.7 62 43-116 148-209 (230)
39 2fli_A Ribulose-phosphate 3-ep 80.6 3.4 0.00012 30.2 5.6 62 43-116 139-200 (220)
40 3vnd_A TSA, tryptophan synthas 77.8 1.3 4.6E-05 35.0 2.8 54 50-116 181-237 (267)
41 1tqj_A Ribulose-phosphate 3-ep 76.9 2.3 7.8E-05 32.4 3.8 56 53-117 149-204 (230)
42 3cu2_A Ribulose-5-phosphate 3- 76.0 6.9 0.00024 30.3 6.4 63 43-117 156-220 (237)
43 2prs_A High-affinity zinc upta 76.0 21 0.00072 27.6 9.2 69 22-103 160-244 (284)
44 3nav_A Tryptophan synthase alp 75.9 3.4 0.00011 32.8 4.6 54 50-116 183-239 (271)
45 3gi1_A LBP, laminin-binding pr 75.4 17 0.00058 28.4 8.6 71 22-105 165-251 (286)
46 3iwp_A Copper homeostasis prot 74.9 3.1 0.00011 33.8 4.2 39 63-106 194-232 (287)
47 1pq4_A Periplasmic binding pro 74.3 14 0.00048 28.9 7.9 71 22-105 176-260 (291)
48 3tha_A Tryptophan synthase alp 74.0 3.1 0.00011 32.9 4.0 54 49-116 173-229 (252)
49 1geq_A Tryptophan synthase alp 73.9 6 0.00021 29.6 5.4 31 83-116 191-222 (248)
50 1h5y_A HISF; histidine biosynt 73.7 6.4 0.00022 28.8 5.4 31 83-116 198-229 (253)
51 2bdq_A Copper homeostasis prot 73.6 4.5 0.00016 31.7 4.7 25 81-105 176-200 (224)
52 2y88_A Phosphoribosyl isomeras 70.7 3.2 0.00011 30.9 3.2 36 83-118 193-229 (244)
53 1ka9_F Imidazole glycerol phos 68.5 6.3 0.00022 29.4 4.4 31 83-116 196-227 (252)
54 3cx3_A Lipoprotein; zinc-bindi 67.7 36 0.0012 26.3 8.9 72 23-107 164-251 (284)
55 3f4w_A Putative hexulose 6 pho 66.9 4.1 0.00014 29.6 3.0 31 83-116 159-189 (211)
56 1qop_A Tryptophan synthase alp 66.3 4.2 0.00014 31.5 3.1 32 83-117 205-237 (268)
57 2o1e_A YCDH; alpha-beta protei 65.4 18 0.00061 28.7 6.8 46 48-104 215-261 (312)
58 1vzw_A Phosphoribosyl isomeras 64.3 5.1 0.00017 29.9 3.2 35 83-117 190-225 (244)
59 3ctl_A D-allulose-6-phosphate 63.8 12 0.00042 28.6 5.3 60 43-114 136-195 (231)
60 1vhn_A Putative flavin oxidore 63.7 3.4 0.00012 32.7 2.2 42 83-127 183-225 (318)
61 1xm3_A Thiazole biosynthesis p 63.6 9 0.00031 29.7 4.6 31 83-116 178-209 (264)
62 3dhf_A Nicotinamide phosphorib 63.4 4.6 0.00016 34.9 3.1 65 53-118 309-385 (484)
63 2tps_A Protein (thiamin phosph 62.8 7.4 0.00025 28.5 3.8 30 84-116 173-202 (227)
64 1qo2_A Molecule: N-((5-phospho 61.7 5.8 0.0002 29.7 3.0 35 83-117 188-226 (241)
65 1xi3_A Thiamine phosphate pyro 60.2 6.5 0.00022 28.4 3.0 31 83-116 162-192 (215)
66 1thf_D HISF protein; thermophI 59.6 7.1 0.00024 29.1 3.2 32 83-117 195-227 (253)
67 3ovp_A Ribulose-phosphate 3-ep 58.0 11 0.00037 28.8 4.1 52 52-116 148-199 (228)
68 1wv2_A Thiazole moeity, thiazo 57.5 8.7 0.0003 30.9 3.5 57 45-118 161-220 (265)
69 1vyr_A Pentaerythritol tetrani 55.4 6.5 0.00022 32.1 2.5 42 83-127 294-335 (364)
70 1twd_A Copper homeostasis prot 54.7 10 0.00035 30.3 3.5 40 53-101 149-188 (256)
71 3tqv_A Nicotinate-nucleotide p 54.5 18 0.00062 29.1 5.0 48 56-120 227-274 (287)
72 2w6r_A Imidazole glycerol phos 54.4 9.1 0.00031 28.8 3.1 43 83-128 74-119 (266)
73 3ohe_A Histidine triad (HIT) p 53.9 13 0.00043 26.2 3.6 29 46-74 107-135 (137)
74 2v82_A 2-dehydro-3-deoxy-6-pho 53.8 9.3 0.00032 27.8 3.0 32 83-117 148-179 (212)
75 3l0g_A Nicotinate-nucleotide p 53.2 22 0.00074 28.9 5.3 48 55-119 235-282 (300)
76 4gj1_A 1-(5-phosphoribosyl)-5- 52.9 16 0.00053 28.0 4.2 31 83-116 196-226 (243)
77 3inp_A D-ribulose-phosphate 3- 52.1 23 0.0008 27.5 5.2 56 52-116 170-225 (246)
78 3b0p_A TRNA-dihydrouridine syn 52.1 7.4 0.00025 31.4 2.3 41 83-128 197-238 (350)
79 1z41_A YQJM, probable NADH-dep 51.9 11 0.00039 30.0 3.4 42 83-127 277-319 (338)
80 2i14_A Nicotinate-nucleotide p 51.5 11 0.00039 31.3 3.4 41 59-103 248-288 (395)
81 3w01_A Heptaprenylglyceryl pho 51.2 7.9 0.00027 30.4 2.3 42 83-129 186-228 (235)
82 2w6r_A Imidazole glycerol phos 49.6 13 0.00046 27.8 3.3 31 83-116 200-231 (266)
83 2r14_A Morphinone reductase; H 48.8 7.8 0.00027 31.8 2.0 41 83-126 299-339 (377)
84 2gou_A Oxidoreductase, FMN-bin 48.3 8.8 0.0003 31.3 2.2 42 83-127 293-334 (365)
85 2agk_A 1-(5-phosphoribosyl)-5- 48.3 18 0.00062 28.0 4.0 34 83-117 205-239 (260)
86 1viz_A PCRB protein homolog; s 48.1 18 0.00063 28.1 4.0 30 83-116 182-212 (240)
87 3gnn_A Nicotinate-nucleotide p 47.7 36 0.0012 27.5 5.7 50 56-122 238-287 (298)
88 3jr2_A Hexulose-6-phosphate sy 47.4 24 0.00082 26.1 4.4 31 83-116 166-196 (218)
89 3tdn_A FLR symmetric alpha-bet 45.7 4.3 0.00015 30.5 0.0 32 83-117 200-232 (247)
90 3i24_A HIT family hydrolase; s 45.7 16 0.00055 26.2 3.1 31 46-76 107-137 (149)
91 1vlp_A Naprtase, nicotinate ph 45.4 9.7 0.00033 32.3 2.1 47 53-101 304-351 (441)
92 2i1o_A Nicotinate phosphoribos 45.1 20 0.00067 29.9 3.9 41 59-103 250-290 (398)
93 2hsa_B 12-oxophytodienoate red 45.1 12 0.0004 31.0 2.5 42 83-127 319-360 (402)
94 1y0e_A Putative N-acetylmannos 43.7 26 0.00088 25.5 4.0 31 83-116 175-206 (223)
95 1qpo_A Quinolinate acid phosph 43.7 50 0.0017 26.2 6.0 48 56-115 223-270 (284)
96 3vzx_A Heptaprenylglyceryl pho 43.5 16 0.00055 28.4 2.9 31 83-117 180-211 (228)
97 2htm_A Thiazole biosynthesis p 43.3 27 0.00093 28.0 4.3 59 45-118 150-211 (268)
98 2f6u_A GGGPS, (S)-3-O-geranylg 43.2 22 0.00075 27.6 3.7 30 83-116 190-220 (234)
99 3i4s_A Histidine triad protein 42.2 22 0.00074 25.6 3.3 30 45-74 111-140 (149)
100 3aty_A Tcoye, prostaglandin F2 40.9 14 0.00049 30.3 2.4 41 83-126 307-347 (379)
101 2phc_B Uncharacterized protein 40.5 37 0.0013 26.2 4.6 63 36-109 48-112 (225)
102 3ajx_A 3-hexulose-6-phosphate 39.3 42 0.0014 24.0 4.6 31 83-116 158-188 (207)
103 3l5l_A Xenobiotic reductase A; 39.2 20 0.00068 29.0 3.0 40 83-125 295-335 (363)
104 2f7f_A Nicotinate phosphoribos 39.0 24 0.00082 30.3 3.6 48 62-116 269-316 (494)
105 1o4u_A Type II quinolic acid p 38.9 37 0.0013 27.1 4.5 48 56-115 222-269 (285)
106 1yxy_A Putative N-acetylmannos 38.9 19 0.00066 26.5 2.7 32 83-117 186-218 (234)
107 4ab4_A Xenobiotic reductase B; 38.3 21 0.0007 29.3 3.0 41 83-126 279-319 (362)
108 3gka_A N-ethylmaleimide reduct 38.1 21 0.00071 29.2 3.0 40 83-125 287-326 (361)
109 3gr7_A NADPH dehydrogenase; fl 37.5 21 0.00071 28.7 2.8 42 83-127 277-319 (340)
110 2agk_A 1-(5-phosphoribosyl)-5- 37.0 28 0.00096 26.9 3.4 30 83-116 76-105 (260)
111 3hgj_A Chromate reductase; TIM 36.9 28 0.00095 27.9 3.5 39 83-124 288-327 (349)
112 1nrp_R Receptor based peptide 36.3 7.3 0.00025 20.6 -0.0 6 43-48 14-19 (26)
113 2b7n_A Probable nicotinate-nuc 36.0 40 0.0014 26.3 4.2 49 56-118 211-259 (273)
114 3kru_A NADH:flavin oxidoreduct 35.7 29 0.00098 28.1 3.4 40 83-125 277-317 (343)
115 1yad_A Regulatory protein TENI 35.6 28 0.00097 25.4 3.1 31 83-116 164-194 (221)
116 3qja_A IGPS, indole-3-glycerol 35.0 22 0.00075 27.9 2.6 31 83-116 213-244 (272)
117 1uwd_A Hypothetical protein TM 34.8 15 0.00051 24.4 1.3 32 17-48 55-88 (103)
118 1icp_A OPR1, 12-oxophytodienoa 34.6 20 0.00069 29.3 2.3 42 83-127 301-342 (376)
119 1nro_R Receptor based peptide 34.2 8.4 0.00029 20.5 -0.0 6 43-48 14-19 (27)
120 3fys_A Protein DEGV; fatty aci 33.9 1.1E+02 0.0037 24.4 6.6 58 1-71 222-284 (315)
121 1ep3_A Dihydroorotate dehydrog 33.6 16 0.00055 28.0 1.5 42 83-128 241-283 (311)
122 3igs_A N-acetylmannosamine-6-p 33.6 23 0.00079 26.9 2.4 32 83-117 181-213 (232)
123 1ybe_A Naprtase, nicotinate ph 33.1 27 0.00092 29.6 3.0 49 52-102 309-357 (449)
124 4aaj_A N-(5'-phosphoribosyl)an 33.0 40 0.0014 25.8 3.7 23 84-106 174-196 (228)
125 3o07_A Pyridoxine biosynthesis 31.9 32 0.0011 28.0 3.0 34 83-119 198-234 (291)
126 3ksv_A Uncharacterized protein 30.4 46 0.0016 23.4 3.4 28 44-74 121-148 (149)
127 3exr_A RMPD (hexulose-6-phosph 29.8 77 0.0026 23.7 4.8 50 52-116 149-198 (221)
128 2eee_A Uncharacterized protein 29.6 83 0.0028 22.1 4.7 47 21-73 91-138 (149)
129 3imi_A HIT family protein; str 29.5 39 0.0013 23.5 2.9 28 44-72 119-146 (147)
130 2bf9_A Pancreatic hormone; tur 28.8 64 0.0022 18.4 3.1 23 52-74 8-30 (36)
131 3r6f_A HIT family protein; str 28.7 50 0.0017 22.6 3.3 27 44-73 108-134 (135)
132 2xd7_A Core histone macro-H2A. 28.6 91 0.0031 23.0 4.9 53 20-75 111-165 (193)
133 3paj_A Nicotinate-nucleotide p 28.5 66 0.0023 26.2 4.4 48 56-120 260-307 (320)
134 1jvn_A Glutamine, bifunctional 28.0 63 0.0021 27.7 4.4 33 83-117 496-529 (555)
135 2z51_A NIFU-like protein 2, ch 27.9 45 0.0015 24.3 3.1 23 52-74 81-103 (154)
136 1wa3_A 2-keto-3-deoxy-6-phosph 27.7 38 0.0013 24.2 2.7 31 83-116 150-180 (205)
137 3lno_A Putative uncharacterize 27.5 26 0.0009 23.5 1.6 32 17-48 57-91 (108)
138 3nrd_A Histidine triad (HIT) p 27.4 38 0.0013 23.5 2.5 26 46-71 109-134 (135)
139 2lv7_A Calcium-binding protein 27.3 24 0.00082 23.0 1.3 34 89-130 66-99 (100)
140 3ub6_A Chemoreceptor TLPB; hom 27.1 24 0.00083 25.6 1.5 31 44-76 143-174 (181)
141 1spv_A Putative polyprotein/ph 26.7 97 0.0033 22.6 4.8 52 20-74 94-147 (184)
142 3cwo_X Beta/alpha-barrel prote 26.2 50 0.0017 23.1 3.0 31 83-116 174-205 (237)
143 1jub_A Dihydroorotate dehydrog 26.0 20 0.00069 27.7 0.9 43 83-128 242-285 (311)
144 3cq1_A Putative uncharacterize 24.7 14 0.00049 24.5 -0.2 30 19-48 56-87 (103)
145 2hl0_A Threonyl-tRNA synthetas 24.6 2E+02 0.007 20.8 7.0 67 6-75 36-108 (143)
146 3fdj_A DEGV family protein; GU 24.5 2.3E+02 0.0079 21.8 6.8 59 1-72 186-248 (278)
147 3q58_A N-acetylmannosamine-6-p 24.3 41 0.0014 25.5 2.4 32 83-117 181-213 (229)
148 2nv1_A Pyridoxal biosynthesis 24.3 31 0.0011 26.9 1.7 33 83-118 207-242 (305)
149 3l5a_A NADH/flavin oxidoreduct 24.2 58 0.002 27.0 3.4 49 64-125 307-356 (419)
150 2x47_A Macro domain-containing 24.0 1.2E+02 0.0042 23.2 5.0 52 20-74 150-203 (235)
151 2jbm_A Nicotinate-nucleotide p 23.7 82 0.0028 25.0 4.1 46 56-113 226-271 (299)
152 1bba_A Bovine pancreatic polyp 23.6 61 0.0021 18.5 2.4 23 52-74 8-30 (36)
153 1uxy_A MURB, uridine diphospho 23.6 78 0.0027 25.5 4.0 43 55-99 295-337 (340)
154 3abf_A 4-oxalocrotonate tautom 23.4 85 0.0029 18.0 3.2 35 20-54 17-57 (64)
155 3fkr_A L-2-keto-3-deoxyarabona 23.3 1.2E+02 0.0042 23.7 5.1 58 50-115 49-111 (309)
156 3mlc_A FG41 malonate semialdeh 22.5 1.4E+02 0.0047 20.6 4.7 36 20-55 81-121 (136)
157 2fg1_A Conserved hypothetical 22.3 1.3E+02 0.0044 21.1 4.6 48 20-74 100-148 (158)
158 1qtw_A Endonuclease IV; DNA re 22.1 1.3E+02 0.0045 21.8 4.8 31 38-68 138-168 (285)
159 4abl_A Poly [ADP-ribose] polym 21.5 1.1E+02 0.0039 22.4 4.2 50 23-75 102-153 (183)
160 3l7x_A SMU.412C, putative HIT- 21.5 80 0.0027 22.9 3.4 26 44-72 146-171 (173)
161 3do8_A Phosphopantetheine aden 21.0 30 0.001 24.5 0.9 35 84-118 1-38 (148)
162 1njr_A 32.1 kDa protein in ADH 20.9 2.3E+02 0.0077 22.5 6.2 52 19-74 166-219 (284)
163 2zbt_A Pyridoxal biosynthesis 20.9 43 0.0015 25.7 1.9 33 83-118 207-242 (297)
164 3ceu_A Thiamine phosphate pyro 20.7 1.6E+02 0.0054 21.3 4.9 30 83-115 144-173 (210)
165 3kh6_A Poly [ADP-ribose] polym 20.6 1.2E+02 0.0042 22.7 4.3 50 23-75 113-164 (199)
166 2l60_A Peptide YY; GPCR ligand 20.4 82 0.0028 18.4 2.6 22 53-74 13-34 (41)
167 2e6f_A Dihydroorotate dehydrog 20.2 29 0.00098 26.9 0.7 43 83-128 244-287 (314)
168 4f3h_A Fimxeal, putative uncha 20.2 1.4E+02 0.0048 21.8 4.5 31 20-54 8-38 (250)
169 2jr5_A UPF0350 protein VC_2471 20.1 75 0.0026 21.2 2.7 26 48-74 58-83 (94)
170 2yzr_A Pyridoxal biosynthesis 20.0 87 0.003 25.7 3.6 32 83-117 240-274 (330)
171 1y23_A HIT, histidine triad pr 20.0 71 0.0024 21.7 2.7 30 43-73 114-143 (145)
No 1
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=100.00 E-value=1.5e-41 Score=276.23 Aligned_cols=108 Identities=29% Similarity=0.397 Sum_probs=101.9
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+.+|++++ ++++++|||||+||||||++|||+++|++|++||++++++|+.++++++|||||||||++
T Consensus 143 ~t~~vv~~Ql~~~l~~l~~~~~~~vvIAYEPVWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~ 222 (267)
T 3ta6_A 143 NHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAK 222 (267)
T ss_dssp CHHHHHHHHHHHHTTTCCHHHHTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSCEEECSCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCHHHhCCEEEEECChhhhcCCcCCCHHHHHHHHHHHHHHHHHhhChhhhccceEEEcCCcCHh
Confidence 467899999999999986 588999999999999999999999999999999999999999889999999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+++|+++ +|+||+|||+||+ ++++|.+||
T Consensus 223 N~~el~~~--~diDG~LVGgASL--~~~~F~~Ii 252 (267)
T 3ta6_A 223 NVGDIVAQ--DDVDGGLVGGASL--DGEHFATLA 252 (267)
T ss_dssp THHHHHTS--TTCCEEEECGGGG--SHHHHHHHH
T ss_pred HHHHHhcC--CCCCEEEechHhc--CHHHHHHHH
Confidence 99999987 7889999998886 789999997
No 2
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=100.00 E-value=7e-41 Score=269.24 Aligned_cols=107 Identities=37% Similarity=0.593 Sum_probs=100.1
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+.++++++ ++++++|||||+||||||++|||+++|++|++||++++++||.++++++||||||||||+
T Consensus 132 ~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~ 211 (244)
T 2v5b_A 132 RTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVHELLRRWVRSKLGTDIAAQLRILYGGSVTAK 211 (244)
T ss_dssp CHHHHHHHHHHHHHTTCCTGGGGGEEEEECCHHHHSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCHH
T ss_pred CHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCCCHh
Confidence 457899999999999885 578999999999999999999999999999999999999999888889999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+++|+++ +|+||+|||+||+ + ++|.+||
T Consensus 212 N~~~l~~~--~diDG~LVGgASL--~-~~F~~Ii 240 (244)
T 2v5b_A 212 NARTLYQM--RDINGFLVGGASL--K-PEFVEII 240 (244)
T ss_dssp HHHHHHTS--TTCCEEEESGGGS--S-TTHHHHH
T ss_pred HHHHHhcC--CCCCeeeechHHH--H-HHHHHHH
Confidence 99999988 7889999998886 7 8999997
No 3
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=100.00 E-value=2.1e-40 Score=270.17 Aligned_cols=104 Identities=32% Similarity=0.438 Sum_probs=97.2
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+.+|++++ ++++++||||||||||||++|||+|+|++|++||++++++| ++++||||||||||+
T Consensus 163 ~t~~vv~~Ql~~~l~~~~~~~~~~vVIAYEPVWAIGTG~tAt~e~aqevh~~IR~~l~~~~----a~~~rIlYGGSV~~~ 238 (272)
T 4g1k_A 163 TTEQVVGAQLDAVLAVLSPDEAARIVVAYEPVWAIGTGKSATAEQAQQVHAFLRGRLAAKG----AGHVSLLYGGSVKAD 238 (272)
T ss_dssp CHHHHHHHHHHHHHTTSCHHHHTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHT----CTTSCEEECSCCCTT
T ss_pred CHHHHHHHHHHHHHhCCCHHHcCCEEEEECcHhhccCCCCCCHHHHHHHHHHHHHHHHHhh----cCCceEEEcCCcCHh
Confidence 467899999999999886 57899999999999999999999999999999999999987 778999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+++|+++ +|+||+|||+||+ ++++|.+||
T Consensus 239 N~~el~~~--~dIDG~LVGgASL--~~~~F~~Ii 268 (272)
T 4g1k_A 239 NAAELFGQ--PDIDGGLIGGASL--KSGDFLAIC 268 (272)
T ss_dssp THHHHHTS--TTCCEEEECGGGG--SHHHHHHHH
T ss_pred HHHHHhcC--CCCCEEEechHhc--CHHHHHHHH
Confidence 99999988 7889999998886 789999997
No 4
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=100.00 E-value=3.2e-40 Score=266.75 Aligned_cols=108 Identities=28% Similarity=0.394 Sum_probs=99.4
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+|++..+++++ ++++++|||||+||||||++|||++++++|++||++++++|+.++++++|||||||||++
T Consensus 141 ~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~ 220 (254)
T 3m9y_A 141 KANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPN 220 (254)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHHHCEEEECCGGGCC--CCCCHHHHHHHHHHHHHHHHHHSCHHHHTTSEEEECSCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCHHHhCCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHH
Confidence 467899999999999986 578999999999999999999999999999999999999999888999999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+++|+++ +|+||+|||+||+ ++++|.+||
T Consensus 221 N~~~l~~~--~diDG~LVGgASL--~~~~F~~Ii 250 (254)
T 3m9y_A 221 NIKEYMAQ--TDIDGALVGGASL--KVEDFVQLL 250 (254)
T ss_dssp THHHHHTS--TTCCEEEESGGGS--SHHHHHHHH
T ss_pred HHHHHHcC--CCCCeEEeeHHhh--CHHHHHHHH
Confidence 99999987 7889999988885 789999997
No 5
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=100.00 E-value=3.3e-40 Score=269.44 Aligned_cols=106 Identities=27% Similarity=0.392 Sum_probs=89.8
Q ss_pred hhHHHHHHHHHHHhcc-ccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCccc
Q 046110 18 RGLIDLGSVVETLCGK-ISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINST 96 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~-i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N 96 (130)
++.+++.+||+.+|++ .++ ++++||||||||||||++|||+|+|++|++||++++++|+ +.++++||||||||||+|
T Consensus 163 ~t~~vv~~Ql~~~l~~~~~~-~~vVIAYEPVWAIGTGktAt~e~aqevh~~IR~~l~~~~~-~~a~~~rIlYGGSV~~~N 240 (275)
T 3kxq_A 163 KVLDVLTRQLEGSLPDGATA-ENIIIAYEPVWAVGTGNTATSADVAEVHAFIHHKMHSRFG-DEGAKIRLLYGGSVKPSN 240 (275)
T ss_dssp CHHHHHHHHHHHHSCTTCCT-TTEEEEECCCC--------CHHHHHHHHHHHHHHHHHHHH-HHHTTSCEEECSCCCTTT
T ss_pred CHHHHHHHHHHHHHcCCccc-CCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhhh-hhcccceEEEcCCcCHhH
Confidence 5678999999999986 334 8999999999999999999999999999999999999986 688999999999999999
Q ss_pred HHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 97 LQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 97 ~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
+++|+++ +|+||+|||+||+ ++++|.+||
T Consensus 241 a~el~~~--~dIDG~LVGgASL--~~~~F~~Ii 269 (275)
T 3kxq_A 241 AFELLST--AHVNGALIGGASL--KAIDFLTIC 269 (275)
T ss_dssp HHHHHTS--TTCCEEEESGGGS--SHHHHHHHH
T ss_pred HHHHHcC--CccceEEeehhhc--CHHHHHHHH
Confidence 9999987 7889999998885 889999998
No 6
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=100.00 E-value=9.7e-40 Score=263.44 Aligned_cols=108 Identities=27% Similarity=0.382 Sum_probs=100.9
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+..+++++ ++++++|||||+||||||++|||++++++|++||++++++|+.++++++|||||||||++
T Consensus 137 ~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~ 216 (250)
T 1yya_A 137 EAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNPK 216 (250)
T ss_dssp CHHHHHHHHHHHHTTTCCCSSGGGCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCTT
T ss_pred CHHHHHHHHHHHHHhcCCHHHcCcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHH
Confidence 467899999999999885 578999999999999999999999999999999999999999888899999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+++|+++ +|+||+|||+||+ ++++|.+||
T Consensus 217 N~~~l~~~--~diDG~LVGgAsL--~a~~F~~ii 246 (250)
T 1yya_A 217 NFADLLSM--PNVDGGLVGGASL--ELESFLALL 246 (250)
T ss_dssp THHHHHTS--TTCCEEEESGGGS--SHHHHHHHH
T ss_pred HHHHHHcC--CCCCeeEeeHHHh--ChHHHHHHH
Confidence 99999987 7889999988875 789999997
No 7
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=100.00 E-value=1.7e-39 Score=261.84 Aligned_cols=109 Identities=40% Similarity=0.572 Sum_probs=101.4
Q ss_pred hhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccH
Q 046110 18 RGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTL 97 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~ 97 (130)
++.+++.+||+.+++++.++++++|||||+||||||++|||++++++|++||++++++|+.++++++|||||||||++|+
T Consensus 138 ~t~~vv~~Ql~~~l~~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~ 217 (248)
T 1r2r_A 138 ITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATC 217 (248)
T ss_dssp CHHHHHHHHHHHHHHTCSCGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTH
T ss_pred ChHHHHHHHHHHHHhhhhhhhceEEEEecHHhhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHhHH
Confidence 45889999999999988678999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHcccCCCcceEEEeeeeccccccccccccC
Q 046110 98 QLNIQYYYPNLFIELTLAFSIRYQGDVFSCICL 130 (130)
Q Consensus 98 ~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~~ 130 (130)
.+|+.+ +|+||+|||+||+ ++++|.+||.
T Consensus 218 ~~l~~~--~diDG~LVGgAsL--~a~~F~~ii~ 246 (248)
T 1r2r_A 218 KELASQ--PDVDGFLVGGASL--KPEFVDIINA 246 (248)
T ss_dssp HHHHTS--TTCCEEEESGGGG--STHHHHHHTS
T ss_pred HHHHcC--CCCCeeEechHHh--ChHHHHHHHh
Confidence 999987 7889999988875 7799999983
No 8
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=100.00 E-value=1.1e-39 Score=263.36 Aligned_cols=108 Identities=25% Similarity=0.353 Sum_probs=100.9
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+..+++++ ++++++|||||+||||||++|||++++++|++||++++++|+.+++.++|||||||||++
T Consensus 137 ~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~ 216 (252)
T 2btm_A 137 QTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPD 216 (252)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHTTCEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHTTSEEEEESSCCTT
T ss_pred CHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCHH
Confidence 467899999999999886 478999999999999999999999999999999999999999888899999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+++|+++ +|+||+|||+||+ ++++|..||
T Consensus 217 N~~~l~~~--~diDG~LVGgAsL--~a~~F~~Ii 246 (252)
T 2btm_A 217 NIRDFLAQ--QQIDGALVGGASL--EPASFLQLV 246 (252)
T ss_dssp THHHHHTS--TTCCEEEESGGGS--SHHHHHHHH
T ss_pred HHHHHHcC--CCCCeeEecHHHh--ChHHHHHHH
Confidence 99999987 7889999988875 789999997
No 9
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=100.00 E-value=2.2e-39 Score=262.60 Aligned_cols=109 Identities=35% Similarity=0.565 Sum_probs=101.5
Q ss_pred hhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccH
Q 046110 18 RGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTL 97 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~ 97 (130)
++.+++.+|++.++++++++++++|||||+||||||++|||++++++|++||++++++|+..++.++|||||||||++|+
T Consensus 137 ~t~~vv~~Ql~~~l~~~~~~~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~ 216 (259)
T 2i9e_A 137 KTEEVVFRQTKAIAAKVNDWSNVVIAYEPVWAIGTGKTATPQQAQDVHKALRQWICENIDAKVGNSIRIQYGGSVTAANC 216 (259)
T ss_dssp CHHHHHHHHHHHHHHHCSCCTTEEEEECCGGGTTSSSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEECSCCCTTTH
T ss_pred CHHHHHHHHHHHHHhcchhhcCEEEEEcCHHHcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHhhH
Confidence 46789999999999888678999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHcccCCCcceEEEeeeeccccccccccccC
Q 046110 98 QLNIQYYYPNLFIELTLAFSIRYQGDVFSCICL 130 (130)
Q Consensus 98 ~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~~ 130 (130)
.+|+.+ +|+||+|||+||+ ++++|.+||.
T Consensus 217 ~~l~~~--~diDG~LVGgAsL--~a~~F~~Ii~ 245 (259)
T 2i9e_A 217 KELASQ--PDIDGFLVGGASL--KPEFVDIINA 245 (259)
T ss_dssp HHHHTS--TTCCEEEESGGGG--STHHHHHHTT
T ss_pred HHHhcC--CCCCeeeechHhh--ChHHHHHHHH
Confidence 999987 7889999988875 7899999983
No 10
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=100.00 E-value=2.4e-39 Score=260.93 Aligned_cols=107 Identities=36% Similarity=0.514 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccH
Q 046110 18 RGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTL 97 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~ 97 (130)
++.+++.+||+..+++++++++++|||||+||||||++|+|++++++|++||++++++|+.++++++|||||||||++|+
T Consensus 138 ~t~~vv~~Ql~~~l~~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~ 217 (248)
T 1o5x_A 138 KTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENC 217 (248)
T ss_dssp CHHHHHHHHHHTTGGGCCCTTSEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSEEEECSCCCTTTH
T ss_pred ChHHHHHHHHHHHHhhhhhhcCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCCCCHHHH
Confidence 37889999999999988778999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 98 QLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 98 ~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
++|+++ +|+||+|||+||+ + ++|.+||
T Consensus 218 ~~l~~~--~diDG~LVGgAsL--~-~~F~~ii 244 (248)
T 1o5x_A 218 SSLIQQ--EDIDGFLVGNASL--K-ESFVDII 244 (248)
T ss_dssp HHHHTS--TTCCEEEECGGGG--S-TTHHHHH
T ss_pred HHHHcC--CCCCeeEeeHHHH--H-HHHHHHH
Confidence 999987 7889999988885 7 8999997
No 11
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=100.00 E-value=2.3e-39 Score=261.12 Aligned_cols=108 Identities=37% Similarity=0.544 Sum_probs=97.9
Q ss_pred hhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccH
Q 046110 18 RGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTL 97 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~ 97 (130)
++.+++.+|++.++++++++++++|||||+||||||++|||++++++|++||++++++|+...++++|||||||||++|+
T Consensus 138 ~t~~vv~~Ql~~~l~~~~~~~~~vIAYEPvWAIGTG~~At~e~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~ 217 (249)
T 3th6_A 138 RTEEVCFRQIKHIASNVKDWSKVVIAYEPVWAIGTGKTATPDQAQEVHSKVRNWLSTNVSADVASKVRIQYGGSVNAGNC 217 (249)
T ss_dssp CHHHHHHHHHHHHHTTCSCGGGEEEEECCTTTCCC---CCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTH
T ss_pred CHHHHHHHHHHHHHhchhhhcCEEEEECCcchhcCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCccCHhHH
Confidence 46789999999999998888999999999999999999999999999999999999999988899999999999999999
Q ss_pred HHHHcccCCCcceEEEeeeeccccccccccccC
Q 046110 98 QLNIQYYYPNLFIELTLAFSIRYQGDVFSCICL 130 (130)
Q Consensus 98 ~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~~ 130 (130)
.+|+.+ +|+||+|||+||+ ++ +|.+||.
T Consensus 218 ~~l~~~--~diDG~LVGgASL--~~-~F~~ii~ 245 (249)
T 3th6_A 218 KELGRK--PDIDGFLVGGASL--KP-EFVQIIN 245 (249)
T ss_dssp HHHHTS--TTCCEEEECGGGG--ST-HHHHHHT
T ss_pred HHHhcC--CCCCEEEeehHhh--hH-HHHHHHh
Confidence 999987 7889999988886 66 5999983
No 12
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.3e-39 Score=263.02 Aligned_cols=107 Identities=32% Similarity=0.450 Sum_probs=100.6
Q ss_pred hhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccH
Q 046110 18 RGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTL 97 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~ 97 (130)
++.+++.+||+.+|+++.++++++|||||+||||||++|+|++++++|++||++++++|+.+.++++|||||||||++|+
T Consensus 161 ~t~~vv~~Ql~~~l~~v~~~~~~vIAYEPvWAIGTG~tAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~ 240 (271)
T 3krs_A 161 KTNDVIQKQLTEALKDVSDLSNLVIAYEPIWAIGTGVVATPGQAQEAHAFIREYVTRMYNPQVSSNLRIIYGGSVTPDNC 240 (271)
T ss_dssp CHHHHHHHHHHHHTTTCCCCTTEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHCCEEECSCCCTTTH
T ss_pred CHHHHHHHHHHHHHhchHhhcCEEEEECChhhhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCCccEEEcCCcCHHHH
Confidence 56789999999999988888999999999999999999999999999999999999999998999999999999999999
Q ss_pred HHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 98 QLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 98 ~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
.+|+.+ +|+||+|||+||+ ++ +|.+||
T Consensus 241 ~el~~~--~diDG~LVGgASL--~~-~F~~Ii 267 (271)
T 3krs_A 241 NELIKC--ADIDGFLVGGASL--KP-TFAKII 267 (271)
T ss_dssp HHHHHS--TTCCEEEESGGGG--ST-THHHHH
T ss_pred HHHhcC--CCCCEEEeeHHhh--hH-HHHHHH
Confidence 999987 7889999988886 53 899997
No 13
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=100.00 E-value=2.6e-39 Score=262.20 Aligned_cols=108 Identities=37% Similarity=0.575 Sum_probs=100.6
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+.++++++ ++++++|||||+||||||++|+|++++++|++||++++++|+.++++++|||||||||++
T Consensus 145 ~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~ 224 (261)
T 1m6j_A 145 QTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPA 224 (261)
T ss_dssp CHHHHHHHHHHHHHHHSCTGGGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcccccEEEcCCcCHh
Confidence 458899999999999885 578999999999999999999999999999999999999999888889999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+.+|+.+ +|+||+|||+||+ ++++|.+||
T Consensus 225 N~~~l~~~--~diDG~LVGgAsL--~a~~F~~ii 254 (261)
T 1m6j_A 225 NCNELAKK--ADIDGFLVGGASL--DAAKFKTII 254 (261)
T ss_dssp THHHHHTS--TTCCEEEESGGGG--SHHHHHHHH
T ss_pred hHHHHhcC--CCCCeeEecHHHh--ChHHHHHHH
Confidence 99999987 7889999988875 889999997
No 14
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=100.00 E-value=3.6e-39 Score=260.76 Aligned_cols=107 Identities=33% Similarity=0.493 Sum_probs=99.8
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+|++.++++++ ++++++|||||+||||||++|||++++++|++||++++++|+..+++++|||||||||++
T Consensus 140 ~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~ 219 (255)
T 3qst_A 140 KASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAIGTGKVASTQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPN 219 (255)
T ss_dssp CHHHHHHHHHHHHGGGSCTTCGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTT
T ss_pred CHHHHHHHHHHHHHccCCHHHhCCEEEEECCHHHhcCCCCCCHHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHh
Confidence 467899999999999875 688999999999999999999999999999999999999999888999999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+.+|+.+ +|+||+|||+||+ ++ +|.+||
T Consensus 220 N~~~l~~~--~diDG~LVGgASL--~~-~F~~Ii 248 (255)
T 3qst_A 220 NCNELAAC--PDVDGFLVGGASL--EA-GFINIV 248 (255)
T ss_dssp THHHHHHS--TTCCEEEECGGGG--ST-THHHHH
T ss_pred HHHHHhcC--CCCCEEEeeHHHh--hH-HHHHHH
Confidence 99999987 7889999988886 53 899997
No 15
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=100.00 E-value=3.3e-39 Score=263.50 Aligned_cols=108 Identities=36% Similarity=0.466 Sum_probs=101.0
Q ss_pred hhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccH
Q 046110 18 RGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTL 97 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~ 97 (130)
++.+++.+||+.+++++.++++++|||||+||||||++|+|++++++|++||++++++++.++++++|||||||||++|+
T Consensus 157 ~t~~vv~~Ql~~~l~~~~~~~~vvIAYEPvWAIGTGktAtpe~aqevh~~IR~~l~~~~~~~~a~~vrILYGGSV~~~N~ 236 (275)
T 1mo0_A 157 HTKDVNFRQLQAIVDKGVSWENIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPAVADATRIIYGGSVTADNA 236 (275)
T ss_dssp CHHHHHHHHHHHHHTTTCCSTTEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEEESSCCTTTH
T ss_pred ChHHHHHHHHHHHHhhhhhhcCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhhChhhcCcccEEEcCCCCHhhH
Confidence 45889999999999988778999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 98 QLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 98 ~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
.+|+.+ +|+||+|||+||+ ++++|.+||
T Consensus 237 ~el~~~--~diDG~LVGgASL--ka~~F~~Ii 264 (275)
T 1mo0_A 237 AELGKK--PDIDGFLVGGASL--KPDFVKIIN 264 (275)
T ss_dssp HHHTTS--TTCCEEEESGGGG--STHHHHHHH
T ss_pred HHHhcC--CCCCeeEechHHh--ChHHHHHHH
Confidence 999987 7889999988875 789999997
No 16
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=100.00 E-value=3.9e-39 Score=259.94 Aligned_cols=107 Identities=36% Similarity=0.559 Sum_probs=99.7
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+..+++++ ++++++|||||+||||||++|||++++++|++||++++++|+.++++++|||||||||++
T Consensus 138 ~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~ 217 (250)
T 2j27_A 138 RTAVVVLTQIAAIAKKLKKADWAKVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGK 217 (250)
T ss_dssp CHHHHHHHHHHHHHHTCCGGGGGGEEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTT
T ss_pred cHHHHHHHHHHHHHhcCCHHHhCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCCCHH
Confidence 367899999999999885 578999999999999999999999999999999999999999888889999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+++|+++ +|+||+|||+||+ + ++|.+||
T Consensus 218 N~~~l~~~--~diDG~LVGgAsL--~-~~F~~ii 246 (250)
T 2j27_A 218 NARTLYQQ--RDVNGFLVGGASL--K-PEFVDII 246 (250)
T ss_dssp THHHHHTS--TTCCEEEESGGGG--S-TTHHHHH
T ss_pred HHHHHHcC--CCCCeeeeehHHH--H-HHHHHHH
Confidence 99999987 7889999988885 7 8999997
No 17
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=100.00 E-value=4.6e-39 Score=259.63 Aligned_cols=107 Identities=40% Similarity=0.608 Sum_probs=99.6
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+.++++++ ++++++|||||+||||||++|+|++++++|++||++++++|+.++++++|||||||||++
T Consensus 139 ~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~ 218 (251)
T 2vxn_A 139 QTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVHLLLRKWVSENIGTDVAAKLRILYGGSVNAA 218 (251)
T ss_dssp CHHHHHHHHHHHHHTTCCTGGGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCEEEEESSCCTT
T ss_pred CHHHHHHHHHHHHHhcCCHHHhCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccccEEEcCCcCHh
Confidence 368899999999999885 578999999999999999999999999999999999999999888889999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+.+|+.+ +|+||+|||+||+ + ++|.+||
T Consensus 219 N~~~l~~~--~diDG~LVGgAsL--~-~~F~~Ii 247 (251)
T 2vxn_A 219 NAATLYAK--PDINGFLVGGASL--K-PEFRDII 247 (251)
T ss_dssp THHHHHTS--TTCCEEEESGGGG--S-TTHHHHH
T ss_pred HHHHHhcC--CCCCeeeecHHHH--H-HHHHHHH
Confidence 99999987 7889999988885 7 8999997
No 18
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=100.00 E-value=2.3e-39 Score=261.95 Aligned_cols=107 Identities=32% Similarity=0.458 Sum_probs=99.3
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+..+++++ ++++++|||||+||||||++|||++++++|++||+++++ |+.++++++|||||||||++
T Consensus 138 ~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~-~~~~~a~~vrIlYGGSV~~~ 216 (255)
T 1tre_A 138 KTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAK-VDANIAEQVIIQYGGSVNAS 216 (255)
T ss_dssp CHHHHHHHHHHHHHHHHCGGGGTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHCEEEECSCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCHHHcCcEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHh-cChhhcCcccEEEcCCCCHH
Confidence 467899999999998885 589999999999999999999999999999999999999 98888889999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+++|+++ +|+||+|||+||+ ++++|.+||
T Consensus 217 N~~~l~~~--~diDG~LVGgAsL--~a~~F~~Ii 246 (255)
T 1tre_A 217 NAAELFAQ--PDIDGALVGGASL--KADAFAVIV 246 (255)
T ss_dssp THHHHHTS--TTCCEEEESGGGG--CHHHHHHHH
T ss_pred HHHHHHcC--CCCCeeEecHHHh--ChHHHHHHH
Confidence 99999987 7889999988875 789999997
No 19
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=100.00 E-value=2.8e-39 Score=261.67 Aligned_cols=107 Identities=40% Similarity=0.557 Sum_probs=99.3
Q ss_pred hhHHHHHHHHHHHhccc-c--C-CCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCC
Q 046110 18 RGLIDLGSVVETLCGKI-S--N-WDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVI 93 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i-~--~-~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~ 93 (130)
++.+++.+||+..++++ + + +++++|||||+||||||++|+|++++++|++||++++++|+.++++++|||||||||
T Consensus 139 ~t~~vv~~Ql~~~l~~~~~~~~~~~~vvIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~ 218 (257)
T 2yc6_A 139 RTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQAEEVHVGLRKWFVEKVAAEGAQHIRIIYGGSAN 218 (257)
T ss_dssp CHHHHHHHHHHHHHHHHTTCHHHHHTEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCC
T ss_pred CHHHHHHHHHHHHHhcCCChhhccCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCccC
Confidence 46789999999999988 5 3 789999999999999999999999999999999999999998888999999999999
Q ss_pred cccHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 94 NSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 94 ~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
++|+++|+++ +|+||+|||+||+ +++ |.+||
T Consensus 219 ~~N~~~l~~~--~diDG~LVGgAsL--~a~-F~~Ii 249 (257)
T 2yc6_A 219 GSNNEKLGQC--PNIDGFLVGGASL--KPE-FMTMI 249 (257)
T ss_dssp TTTHHHHHTS--TTCCEEEESGGGG--STH-HHHHH
T ss_pred HHHHHHHHcC--CCCCeeeecHHHH--HHH-HHHHH
Confidence 9999999987 7889999988875 778 99997
No 20
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=100.00 E-value=3.2e-39 Score=260.11 Aligned_cols=108 Identities=29% Similarity=0.387 Sum_probs=100.2
Q ss_pred hhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccH
Q 046110 18 RGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTL 97 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~ 97 (130)
++.+++.+||+..+++++++++++|||||+||||||++|+|++++++|++||++++++|+.++++++|||||||||++|+
T Consensus 137 ~t~~vv~~Ql~~~l~~~~~~~~~vIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~~~~~~va~~vrIlYGGSV~~~N~ 216 (247)
T 1ney_A 137 KTLDVVERQLNAVLEEVKDFTNVVVAYEPVXAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNA 216 (247)
T ss_dssp CHHHHHHHHHHHHHHHCCCCTTEEEEECCGGGTTTSCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCEEEESSCCTTTG
T ss_pred CHHHHHHHHHHHHHhchhhhcCEEEEECChhhcCCCCCCCHHHHHHHHHHHHHHHHHhcChhhcccceEEEcCCcCHhHH
Confidence 36789999999999888678999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHHHcccCCCcceEEEeeeeccccccccccccC
Q 046110 98 QLNIQYYYPNLFIELTLAFSIRYQGDVFSCICL 130 (130)
Q Consensus 98 ~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~~ 130 (130)
.+|+.+ +|+||+|||+||+ + ++|.+||.
T Consensus 217 ~~l~~~--~diDG~LVGgAsL--~-~~F~~Ii~ 244 (247)
T 1ney_A 217 VTFKDK--ADVDGFLVGGASL--K-PEFVDIIN 244 (247)
T ss_dssp GGGTTC--TTCCEEEESGGGG--S-THHHHHHT
T ss_pred HHHHcC--CCCCeeEeehHHH--H-HHHHHHHH
Confidence 999987 7889999988875 7 89999973
No 21
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=100.00 E-value=3.9e-39 Score=260.67 Aligned_cols=107 Identities=23% Similarity=0.417 Sum_probs=99.1
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+..+++++ ++++++|||||+||||||++|+|++++++|++||+++++ ++.++++++|||||||||++
T Consensus 140 ~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~Atpe~a~evh~~IR~~l~~-~~~~~a~~vrIlYGGSV~~~ 218 (256)
T 1aw2_A 140 ETMAVCARQLDAVINTQGVEALEGAIIAYEPIWAIGTGKAATAEDAQRIHAQIRAHIAE-KSEAVAKNVVIQYGGSVKPE 218 (256)
T ss_dssp CHHHHHHHHHHHHHHHHCGGGGTTCEEEECCTTTTTSSCCCCHHHHHHHHHHHHHHHHT-TCHHHHHHCEEEECSCCCTT
T ss_pred CHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHh-cChhhcccccEEEcCCCCHH
Confidence 467899999999998885 588999999999999999999999999999999999999 78888889999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
|+++|+++ +|+||+|||+||+ ++++|.+||
T Consensus 219 N~~~l~~~--~diDG~LVGgAsL--~a~~F~~Ii 248 (256)
T 1aw2_A 219 NAAAYFAQ--PDIDGALVGGAAL--DAKSFAAIA 248 (256)
T ss_dssp THHHHTTS--TTCCEEEESGGGG--CHHHHHHHH
T ss_pred HHHHHHcC--CCCCeeeecHHHh--ChHHHHHHH
Confidence 99999987 7889999988875 789999997
No 22
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=100.00 E-value=2.5e-39 Score=261.85 Aligned_cols=109 Identities=33% Similarity=0.398 Sum_probs=100.9
Q ss_pred hhHHHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcc
Q 046110 18 RGLIDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINS 95 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~ 95 (130)
++.+++.+||+..+++++ ++++++|||||+||||||++|||++++++|++||++++++|+.+++.++|||||||||++
T Consensus 139 ~t~~vv~~Ql~~~l~~~~~~~~~~~vIAYEPvWAIGTG~~Atpe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~ 218 (255)
T 1b9b_A 139 LTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVATPQQAQEVHAFIRKLLSEMYDEETAGSIRILYGGSIKPD 218 (255)
T ss_dssp CHHHHHHHHHHHHHTTCCHHHHTTCEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHSEEEEESSCCHH
T ss_pred CHHHHHHHHHHHHHhcCCHHHcCCEEEEECCHHHhCCCCCCCHHHHHHHHHHHHHHHHHhcCccccCcceEEEcCcCCHH
Confidence 467899999999999885 478999999999999999999999999999999999999999888889999999999999
Q ss_pred cHHHHHcccCCCcceEEEeeeecccccc--ccccccC
Q 046110 96 TLQLNIQYYYPNLFIELTLAFSIRYQGD--VFSCICL 130 (130)
Q Consensus 96 N~~~l~~~~~~dvdG~Lig~~s~~~~~~--~F~~I~~ 130 (130)
|+++|+++ +|+||+|||+||+ +++ +|.+||.
T Consensus 219 N~~~l~~~--~diDG~LVGgASL--ka~~~~F~~ii~ 251 (255)
T 1b9b_A 219 NFLGLIVQ--KDIDGGLVGGASL--KESFIELARIMR 251 (255)
T ss_dssp HHTTTSSS--TTCCEEEESGGGT--STHHHHHHHHHT
T ss_pred HHHHHHcC--CCCCeeEeehHhh--cCccccHHHHHH
Confidence 99999987 7889999988875 889 9999973
No 23
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=100.00 E-value=6.6e-37 Score=253.39 Aligned_cols=108 Identities=16% Similarity=0.143 Sum_probs=93.1
Q ss_pred hhhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCccc
Q 046110 17 WRGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINST 96 (130)
Q Consensus 17 ~~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N 96 (130)
-++.+++.+||+++|++++.+++++|||||+||||||++|+|++++++|++||++++++|+ ..++++|||||||||++|
T Consensus 195 g~t~~vv~~Ql~~~l~~l~~~~~vVIAYEPVWAIGTGk~Atpe~aqevh~~IR~~l~~~~~-~~a~~vrILYGGSV~~~n 273 (310)
T 3s6d_A 195 GRAVGECEAQIRPVLEALPRDAPVIFAYEPVWAIGKPQPARVDHVGAVVSGIRSVIERIDR-HRKGEVRILYGGSAGPGL 273 (310)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTSCEEEEECCGGGC-----CCHHHHHHHHHHHHHHHHHHHT-TCSSCEEEEEEEEECTTT
T ss_pred ccHHHHHHHHHHHHHhcCCcccceEEEECChhhccCCCCCCHHHHHHHHHHHHHHHHHhhh-cccCceeEEEcCccCHHH
Confidence 3578899999999999998778999999999999999999999999999999999999885 567899999999999999
Q ss_pred HHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 97 LQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 97 ~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
+.+++-. +|+||+|||+||+ ++++|..||
T Consensus 274 ~~~~~l~--~dVDG~LVGgASL--~a~~F~~Ii 302 (310)
T 3s6d_A 274 WGPGGLG--KEVDGMFLGRFAH--DIEGVRKVV 302 (310)
T ss_dssp TTTTSGG--GTCSEEEECGGGG--SHHHHHHHH
T ss_pred Hhhhccc--CCCCEEEeeheee--cHHHHHHHH
Confidence 9995444 7889999988875 889999997
No 24
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=100.00 E-value=1.6e-35 Score=236.87 Aligned_cols=98 Identities=24% Similarity=0.277 Sum_probs=85.5
Q ss_pred hhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccH
Q 046110 18 RGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTL 97 (130)
Q Consensus 18 ~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~ 97 (130)
++.+++.+||+. +. .+ +++++|||||+||||||++|+|++++++|++||++++ +++|||||||||++|+
T Consensus 134 ~t~~vv~~Ql~~-l~-~~-~~~~vIAYEPvWAIGTG~~At~e~a~ev~~~IR~~l~--------~~vrIlYGGSV~~~N~ 202 (233)
T 2jgq_A 134 AVKEFLSEQLEN-ID-LN-YPNLVVAYEPIWAIGTKKSASLEDIYLTHGFLKQILN--------QKTPLLYGGSVNTQNA 202 (233)
T ss_dssp HHHHHHHHHHTT-SC-TT-CTTEEEEECCGGGTTC--CCCHHHHHHHHHHHHHHSC--------TTSCEEEESSCCTTTH
T ss_pred hHHHHHHHHHHh-hh-hh-ccceEEEEeCHHHhCCCCCCCHHHHHHHHHHHHHHHh--------cCCcEEEcCCcChhhH
Confidence 578899999997 43 23 7899999999999999999999999999999999875 3689999999999999
Q ss_pred HHHHcccCCCcceEEEeeeeccccccccccccC
Q 046110 98 QLNIQYYYPNLFIELTLAFSIRYQGDVFSCICL 130 (130)
Q Consensus 98 ~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~~ 130 (130)
.+|+.+ +|+||+|||+||+ ++++|.+||.
T Consensus 203 ~~l~~~--~diDG~LVGgAsl--~a~~f~~ii~ 231 (233)
T 2jgq_A 203 KEILGI--DSVDGLLIGSASW--ELENFKTIIS 231 (233)
T ss_dssp HHHHTS--TTCCEEEESGGGG--SHHHHHHHHT
T ss_pred HHHhcC--CCCCeeEecHHHh--ChHHHHHHHH
Confidence 999987 7889999988875 7899999973
No 25
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=99.85 E-value=2.8e-22 Score=158.97 Aligned_cols=79 Identities=14% Similarity=0.016 Sum_probs=70.3
Q ss_pred CceEEEeeeeeecCCC---CCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEe
Q 046110 38 DNVVLAYEPVWVIGTG---KVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTL 114 (130)
Q Consensus 38 ~~vvIAYEPvWAIGtG---~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig 114 (130)
+..+|||||+|||||| +++++++++++|+.||++. ..++|||||||++.|+.+++.. .++||+|||
T Consensus 137 ~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~---------~~~~ilyggsV~~~n~~~~~~~--~~vDG~LVG 205 (225)
T 1hg3_A 137 NPDYVAVEPPELIGTGIPVSKAKPEVITNTVELVKKVN---------PEVKVLCGAGISTGEDVKKAIE--LGTVGVLLA 205 (225)
T ss_dssp CCSEEEECCTTTTTTSCCTTTSCTHHHHHHHHHHHHHC---------TTSEEEEESSCCSHHHHHHHHH--TTCSEEEES
T ss_pred CCCEEEEeChhhhccCCCCCCCChhHHHHHHHHHHhcc---------CCCEEEEeCCCCcHHHHHHHHh--CCCCEEEeC
Confidence 4569999999999999 9999999999999999753 3589999999999999999987 677999998
Q ss_pred eeecccccccccccc
Q 046110 115 AFSIRYQGDVFSCIC 129 (130)
Q Consensus 115 ~~s~~~~~~~F~~I~ 129 (130)
++++ ++++|.+||
T Consensus 206 ~a~l--~a~~~~~~i 218 (225)
T 1hg3_A 206 SGVT--KAKDPEKAI 218 (225)
T ss_dssp HHHH--TCSSHHHHH
T ss_pred HHHH--CCcCHHHHH
Confidence 7775 778998886
No 26
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=99.85 E-value=3.1e-22 Score=158.89 Aligned_cols=79 Identities=14% Similarity=0.035 Sum_probs=70.1
Q ss_pred CceEEEeeeeeecCCC---CCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEe
Q 046110 38 DNVVLAYEPVWVIGTG---KVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTL 114 (130)
Q Consensus 38 ~~vvIAYEPvWAIGtG---~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig 114 (130)
+..+|||||+|||||| +++++++++++|+.||++. ..++|||||||++.|..+++.. .++||+|||
T Consensus 134 ~~~iIayep~waiGtG~~v~t~~~d~~~~~~~~ir~~~---------~~~~ilyggsV~~~n~~~~~~~--~giDG~LVG 202 (226)
T 1w0m_A 134 GPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHF---------PEVSVITGAGIESGDDVAAALR--LGTRGVLLA 202 (226)
T ss_dssp CCSEEEECCGGGTTTSCCHHHHCHHHHHHHHHHHHHHC---------TTSEEEEESSCCSHHHHHHHHH--TTCSEEEEC
T ss_pred CCCEEEEcChhhhccCCCCCCCChhHHHHHHHHHHhcc---------CCCEEEEeCCCCcHHHHHHHHh--CCCCEEEEC
Confidence 4569999999999999 8999999999999999753 3589999999999999999987 677999998
Q ss_pred eeecccccccccccc
Q 046110 115 AFSIRYQGDVFSCIC 129 (130)
Q Consensus 115 ~~s~~~~~~~F~~I~ 129 (130)
++++ ++++|.+||
T Consensus 203 ~a~l--~a~~~~~~i 215 (226)
T 1w0m_A 203 SAAV--KAKDPYAKI 215 (226)
T ss_dssp HHHH--TCSSHHHHH
T ss_pred HHHH--CCcCHHHHH
Confidence 7775 778998876
No 27
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=4.6e-15 Score=115.56 Aligned_cols=79 Identities=13% Similarity=0.038 Sum_probs=55.3
Q ss_pred CceEEEeeeeeecCCC---CCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEe
Q 046110 38 DNVVLAYEPVWVIGTG---KVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTL 114 (130)
Q Consensus 38 ~~vvIAYEPvWAIGtG---~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig 114 (130)
...+|+|||+|+|||| +++++++++++++.+|+.. .++|++|||||++.|..+.+.. .+.||+|||
T Consensus 131 ~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~---------~~~~ii~ggGI~~~~~~~~~~~--~gaDgvlVG 199 (219)
T 2h6r_A 131 SPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEIN---------KDVKVLCGAGISKGEDVKAALD--LGAEGVLLA 199 (219)
T ss_dssp CCSEEEECCCC--------------CSHHHHHHHHHHC---------TTCEEEECSSCCSHHHHHHHHT--TTCCCEEES
T ss_pred CCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhcc---------CCCeEEEEeCcCcHHHHHHHhh--CCCCEEEEc
Confidence 3468999999999999 8999998999999999742 2579999999999898887765 567999997
Q ss_pred eeecccccccccccc
Q 046110 115 AFSIRYQGDVFSCIC 129 (130)
Q Consensus 115 ~~s~~~~~~~F~~I~ 129 (130)
.++. ++++|..++
T Consensus 200 sAi~--~~~d~~~~~ 212 (219)
T 2h6r_A 200 SGVV--KAKNVEEAI 212 (219)
T ss_dssp HHHH--TCSSHHHHH
T ss_pred HHHh--CcccHHHHH
Confidence 6665 667887765
No 28
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=89.07 E-value=2.1 Score=33.88 Aligned_cols=78 Identities=12% Similarity=0.148 Sum_probs=53.0
Q ss_pred HHHHHHHHHhccccCCCceEEEeeeee---------------ecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCc-
Q 046110 22 DLGSVVETLCGKISNWDNVVLAYEPVW---------------VIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTR- 85 (130)
Q Consensus 22 ~l~~Ql~~~l~~i~~~~~vvIAYEPvW---------------AIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~ir- 85 (130)
.|.++++..+..+...++.++.|+|.| .+.+|..||+.++.++.+.||+. +++
T Consensus 167 ~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~ 235 (294)
T 3hh8_A 167 KLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVI-----------KPSA 235 (294)
T ss_dssp HHHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHS-----------CCSC
T ss_pred HHHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHc-----------CCCE
Confidence 344444444554432236677888876 34588999999999999999852 343
Q ss_pred EEEcCCCCcccHHHHHcccCCCcce
Q 046110 86 IIYRDTVINSTLQLNIQYYYPNLFI 110 (130)
Q Consensus 86 ILYGGSV~~~N~~~l~~~~~~dvdG 110 (130)
|+|=-++++..++.+.+..+..+-|
T Consensus 236 if~e~~~~~~~~~~ia~~~g~~v~~ 260 (294)
T 3hh8_A 236 LFVESSVDRRPMETVSKDSGIPIYS 260 (294)
T ss_dssp EEEETTSCSHHHHHHHHHHCCCEEE
T ss_pred EEEeCCCCcHHHHHHHHHhCCcEEe
Confidence 5667788888888888765555433
No 29
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=88.38 E-value=2.5 Score=33.90 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=50.3
Q ss_pred HHHHHHHHHhccccCCCceEEEeeee---------------eecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCc-
Q 046110 22 DLGSVVETLCGKISNWDNVVLAYEPV---------------WVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTR- 85 (130)
Q Consensus 22 ~l~~Ql~~~l~~i~~~~~vvIAYEPv---------------WAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~ir- 85 (130)
.|.++++..+..+...++.++.|+|. |.+.++..|++.+++++.+.||+ .+++
T Consensus 174 ~Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~~~~~i~~~~ePs~~~l~~l~~~ik~-----------~~v~~ 242 (307)
T 3ujp_A 174 AIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKT-----------NNVPT 242 (307)
T ss_dssp HHHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSCCSSCCCHHHHHHHHHHHHT-----------TTCSE
T ss_pred HHHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEEEeeccCCCCCCCHHHHHHHHHHHHh-----------cCCcE
Confidence 45555555555543234556677764 45668899999999999999984 2444
Q ss_pred EEEcCCCCcccHHHHHcccCCC
Q 046110 86 IIYRDTVINSTLQLNIQYYYPN 107 (130)
Q Consensus 86 ILYGGSV~~~N~~~l~~~~~~d 107 (130)
|+|=-.+++..++.+.+..+..
T Consensus 243 If~e~~~~~k~~~~ia~e~g~~ 264 (307)
T 3ujp_A 243 IFCESTVSDKGQKQVAQATGAR 264 (307)
T ss_dssp EEEETTSCSHHHHHTTTTTCCE
T ss_pred EEEeCCCChHHHHHHHHHhCCc
Confidence 4456668888888887654443
No 30
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=86.04 E-value=1.4 Score=35.83 Aligned_cols=71 Identities=7% Similarity=-0.132 Sum_probs=39.9
Q ss_pred EEEeeeee----ecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEc-CCCCcccHHHHHcccCCCcceEEEee
Q 046110 41 VLAYEPVW----VIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYR-DTVINSTLQLNIQYYYPNLFIELTLA 115 (130)
Q Consensus 41 vIAYEPvW----AIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYG-GSV~~~N~~~l~~~~~~dvdG~Lig~ 115 (130)
+|+.||-| .||+|.+.|.++..+..+.+.+..++.. .+-+-+.|| |=.+|+.+...++... ..||++.
T Consensus 186 iI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vn----pdvivLc~gGpIstpeDv~~~l~~t~-G~~G~~g-- 258 (286)
T 2p10_A 186 ILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIR----DDIIILSHGGPIANPEDARFILDSCQ-GCHGFYG-- 258 (286)
T ss_dssp EEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHC----SCCEEEEESTTCCSHHHHHHHHHHCT-TCCEEEE--
T ss_pred EEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhC----CCcEEEecCCCCCCHHHHHHHHhcCC-CccEEEe--
Confidence 67889995 7889988887775555555555544321 122345577 4557888988887422 2466665
Q ss_pred eec
Q 046110 116 FSI 118 (130)
Q Consensus 116 ~s~ 118 (130)
||+
T Consensus 259 ASs 261 (286)
T 2p10_A 259 ASS 261 (286)
T ss_dssp SHH
T ss_pred ehh
Confidence 664
No 31
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=85.58 E-value=5.3 Score=32.05 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=49.5
Q ss_pred HHHHHHHHHhccccCCCceEEEeeee---------------eecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCc-
Q 046110 22 DLGSVVETLCGKISNWDNVVLAYEPV---------------WVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTR- 85 (130)
Q Consensus 22 ~l~~Ql~~~l~~i~~~~~vvIAYEPv---------------WAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~ir- 85 (130)
.|.++++..+..+...++.++.|+|. |.+.++..||+.++.++.+.||+ .+++
T Consensus 188 ~Ld~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~-----------~~v~~ 256 (321)
T 1xvl_A 188 AIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKT-----------NNVPT 256 (321)
T ss_dssp HHHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHT-----------TTCSE
T ss_pred HHHHHHHHHHhhCcccCCEEEEECchHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHH-----------cCCcE
Confidence 44455555555443223445666554 44567899999999999999984 2455
Q ss_pred EEEcCCCCcccHHHHHcccCCC
Q 046110 86 IIYRDTVINSTLQLNIQYYYPN 107 (130)
Q Consensus 86 ILYGGSV~~~N~~~l~~~~~~d 107 (130)
|+|=-.+++..++.|.+..+..
T Consensus 257 If~e~~~~~~~~~~iA~e~g~~ 278 (321)
T 1xvl_A 257 IFCESTVSDKGQKQVAQATGAR 278 (321)
T ss_dssp EEEETTSCSHHHHHHHTTTCCE
T ss_pred EEEeCCCChHHHHHHHHhcCCc
Confidence 4557778888888887654443
No 32
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=85.05 E-value=2.6 Score=33.11 Aligned_cols=69 Identities=13% Similarity=0.094 Sum_probs=44.8
Q ss_pred HHHHHHHHHhccccCCCceEEEeeeee---------------ecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcE
Q 046110 22 DLGSVVETLCGKISNWDNVVLAYEPVW---------------VIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRI 86 (130)
Q Consensus 22 ~l~~Ql~~~l~~i~~~~~vvIAYEPvW---------------AIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irI 86 (130)
.|.++++..+..+...++.++.|+|.| .+.++..||+.+++++.+.||+. +++.
T Consensus 147 ~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~ 215 (282)
T 3mfq_A 147 DLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDH-----------NIKA 215 (282)
T ss_dssp HHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHH-----------TCCE
T ss_pred HHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHc-----------CCCE
Confidence 344555555555433346667787766 33478889999999999999863 4554
Q ss_pred EE-cCCCCcccHHHHH
Q 046110 87 IY-RDTVINSTLQLNI 101 (130)
Q Consensus 87 LY-GGSV~~~N~~~l~ 101 (130)
++ ==.+++..++.|.
T Consensus 216 if~e~~~~~~~~~~l~ 231 (282)
T 3mfq_A 216 IFTESTTNPERMKKLQ 231 (282)
T ss_dssp EECBTTSCTHHHHHHH
T ss_pred EEEeCCCChHHHHHHH
Confidence 44 4556666666664
No 33
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=83.15 E-value=8 Score=30.83 Aligned_cols=69 Identities=13% Similarity=0.104 Sum_probs=47.3
Q ss_pred HHHHHHHHHhccccCCCceEEEeeee---------------eecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCc-
Q 046110 22 DLGSVVETLCGKISNWDNVVLAYEPV---------------WVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTR- 85 (130)
Q Consensus 22 ~l~~Ql~~~l~~i~~~~~vvIAYEPv---------------WAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~ir- 85 (130)
.|.++++..+..+...++.++.|+|. +.+.++..||+.+++++.+.||+. +++
T Consensus 181 ~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~ 249 (313)
T 1toa_A 181 KLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQR-----------KLPA 249 (313)
T ss_dssp HHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHT-----------TCSE
T ss_pred HHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHc-----------CCCE
Confidence 44455555555443224556677773 345578999999999999999852 455
Q ss_pred EEEcCCCCcccHHHHH
Q 046110 86 IIYRDTVINSTLQLNI 101 (130)
Q Consensus 86 ILYGGSV~~~N~~~l~ 101 (130)
|+|==.+++..++.|.
T Consensus 250 If~e~~~~~~~~~~la 265 (313)
T 1toa_A 250 IFIESSIPHKNVEALR 265 (313)
T ss_dssp EEEETTSCTHHHHHHH
T ss_pred EEEeCCCChHHHHHHH
Confidence 5557778888888887
No 34
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=82.79 E-value=1.8 Score=32.53 Aligned_cols=62 Identities=16% Similarity=-0.017 Sum_probs=39.9
Q ss_pred EEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 42 LAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 42 IAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
|.+=++..-++|....++-.+. .+.+|+.. .+++|.=+|.+|++|+.+++.. -+|++-+|.+
T Consensus 142 vl~~sv~pg~~g~~~~~~~l~~-i~~~~~~~---------~~~pi~v~GGI~~~ni~~~~~a---GaD~vvvGsa 203 (228)
T 1h1y_A 142 VLVMTVEPGFGGQKFMPEMMEK-VRALRKKY---------PSLDIEVDGGLGPSTIDVAASA---GANCIVAGSS 203 (228)
T ss_dssp EEEESSCTTCSSCCCCGGGHHH-HHHHHHHC---------TTSEEEEESSCSTTTHHHHHHH---TCCEEEESHH
T ss_pred EEEEeecCCCCcccCCHHHHHH-HHHHHHhc---------CCCCEEEECCcCHHHHHHHHHc---CCCEEEECHH
Confidence 3344444444666665554443 45555432 1468888999999999999864 3588888654
No 35
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=82.35 E-value=1.2 Score=34.66 Aligned_cols=44 Identities=7% Similarity=-0.084 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCC-cccHHHHHcccCCCcceEEEeee
Q 046110 59 AQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 59 ~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.++.+.++.+|+.. ++|+..||-++ +++++++... . ||+.||.+
T Consensus 192 ~~~~~~v~~vr~~~----------~~pv~vG~GI~t~e~~~~~~~g--A--DgvIVGSa 236 (262)
T 2ekc_A 192 ERIKKKVEEYRELC----------DKPVVVGFGVSKKEHAREIGSF--A--DGVVVGSA 236 (262)
T ss_dssp HHHHHHHHHHHHHC----------CSCEEEESSCCSHHHHHHHHTT--S--SEEEECHH
T ss_pred ccHHHHHHHHHhhc----------CCCEEEeCCCCCHHHHHHHHcC--C--CEEEECHH
Confidence 45666677777531 46899999998 9999996543 3 89999654
No 36
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=82.19 E-value=0.66 Score=36.74 Aligned_cols=30 Identities=7% Similarity=-0.237 Sum_probs=24.4
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
++|+++||-++ +++++++ . .. ||+.||.+-
T Consensus 202 ~~Pv~vGfGI~t~e~a~~~-~--~A--DgVIVGSAi 232 (271)
T 1ujp_A 202 ALPVAVGFGVSGKATAAQA-A--VA--DGVVVGSAL 232 (271)
T ss_dssp CSCEEEESCCCSHHHHHHH-T--TS--SEEEECHHH
T ss_pred CCCEEEEcCCCCHHHHHHh-c--CC--CEEEEChHH
Confidence 57999999998 9999997 3 34 899996553
No 37
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=82.06 E-value=1.8 Score=33.20 Aligned_cols=31 Identities=3% Similarity=-0.208 Sum_probs=25.5
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++||+.||.++ ++|+.+++.. . .||+.+|.+
T Consensus 201 ~~pI~vgGGI~~~e~~~~~~~~-G--AdgvvVGSa 232 (262)
T 1rd5_A 201 NKPVAVGFGISKPEHVKQIAQW-G--ADGVIIGSA 232 (262)
T ss_dssp SSCEEEESCCCSHHHHHHHHHT-T--CSEEEECHH
T ss_pred CCeEEEECCcCCHHHHHHHHHc-C--CCEEEEChH
Confidence 47999999999 9999999863 3 488999655
No 38
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=81.75 E-value=2.9 Score=31.11 Aligned_cols=62 Identities=15% Similarity=0.005 Sum_probs=39.1
Q ss_pred EeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 43 AYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 43 AYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
+.+| .++|....+.-.+ -.+.+|+.+.+. +.++++.=+|.++++|+.++++. .. ||+-+|.+
T Consensus 148 ~~~p---g~~g~~~~~~~~~-~i~~l~~~~~~~-----~~~~pi~v~GGI~~~n~~~~~~a-Ga--d~vvvgSa 209 (230)
T 1rpx_A 148 SVNP---GFGGQSFIESQVK-KISDLRKICAER-----GLNPWIEVDGGVGPKNAYKVIEA-GA--NALVAGSA 209 (230)
T ss_dssp SSCT---TCSSCCCCTTHHH-HHHHHHHHHHHH-----TCCCEEEEESSCCTTTHHHHHHH-TC--CEEEESHH
T ss_pred EEcC---CCCCccccHHHHH-HHHHHHHHHHhc-----CCCceEEEECCCCHHHHHHHHHc-CC--CEEEEChh
Confidence 6666 3456655554333 345566554321 22578888999999999998764 34 88888654
No 39
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=80.59 E-value=3.4 Score=30.25 Aligned_cols=62 Identities=18% Similarity=0.163 Sum_probs=39.6
Q ss_pred EeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 43 AYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 43 AYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
+++| .++|....+.-.+ -.+.+|+..... +.+++++-.|.++++|++++++. . .||+-+|.+
T Consensus 139 ~~~~---g~~g~~~~~~~~~-~i~~~~~~~~~~-----~~~~~i~v~GGI~~~~~~~~~~~-G--ad~vvvGsa 200 (220)
T 2fli_A 139 TVNP---GFGGQAFIPECLE-KVATVAKWRDEK-----GLSFDIEVDGGVDNKTIRACYEA-G--ANVFVAGSY 200 (220)
T ss_dssp SSCT---TCSSCCCCGGGHH-HHHHHHHHHHHT-----TCCCEEEEESSCCTTTHHHHHHH-T--CCEEEESHH
T ss_pred EECC---CCcccccCHHHHH-HHHHHHHHHHhc-----CCCceEEEECcCCHHHHHHHHHc-C--CCEEEEChH
Confidence 5666 3456665554333 245566554321 12478888999999999998764 3 488888655
No 40
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=77.77 E-value=1.3 Score=35.04 Aligned_cols=54 Identities=9% Similarity=0.083 Sum_probs=32.0
Q ss_pred cC-CCCCC-ChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCC-cccHHHHHcccCCCcceEEEeee
Q 046110 50 IG-TGKVA-VPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 50 IG-tG~~a-s~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.| ||... .++++.+.++.+|+. .++|+++||-++ ++++++.+.. . -||+.||.+
T Consensus 181 ~GvTG~~~~~~~~~~~~v~~vr~~----------~~~pv~vGfGI~~~e~~~~~~~~-g--ADgvVVGSa 237 (267)
T 3vnd_A 181 AGVTGTESKAGEPIENILTQLAEF----------NAPPPLLGFGIAEPEQVRAAIKA-G--AAGAISGSA 237 (267)
T ss_dssp CCCC--------CHHHHHHHHHTT----------TCCCEEECSSCCSHHHHHHHHHT-T--CSEEEECHH
T ss_pred CCCCCCccCCcHHHHHHHHHHHHh----------cCCCEEEECCcCCHHHHHHHHHc-C--CCEEEECHH
Confidence 45 66553 344556666666642 147999999995 9999955542 2 389999543
No 41
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=76.87 E-value=2.3 Score=32.41 Aligned_cols=56 Identities=9% Similarity=-0.010 Sum_probs=35.7
Q ss_pred CCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeeee
Q 046110 53 GKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 53 G~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
|....+ ..-+-++.+|+...+. +-+++|.=+|.+|++|+.++... + .||+-+|.+-
T Consensus 149 gq~~~~-~~~~~i~~lr~~~~~~-----~~~~~I~v~GGI~~~~~~~~~~a-G--ad~vvvGSai 204 (230)
T 1tqj_A 149 GQSFIP-EVLPKIRALRQMCDER-----GLDPWIEVDGGLKPNNTWQVLEA-G--ANAIVAGSAV 204 (230)
T ss_dssp -CCCCG-GGHHHHHHHHHHHHHH-----TCCCEEEEESSCCTTTTHHHHHH-T--CCEEEESHHH
T ss_pred CccCcH-HHHHHHHHHHHHHHhc-----CCCCcEEEECCcCHHHHHHHHHc-C--CCEEEECHHH
Confidence 444333 3334445666655321 22578999999999999999863 3 4888886543
No 42
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=76.04 E-value=6.9 Score=30.31 Aligned_cols=63 Identities=10% Similarity=-0.061 Sum_probs=40.1
Q ss_pred EeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHc--ccCCCcceEEEeeee
Q 046110 43 AYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQ--YYYPNLFIELTLAFS 117 (130)
Q Consensus 43 AYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~--~~~~dvdG~Lig~~s 117 (130)
+.+|.+. |+.. .+..-+-++.+|+.+.++ +-+++|.=.|.+|++|+.++.+ . + .|++.+|.+-
T Consensus 156 sv~pgfg---gq~f-~~~~l~ki~~lr~~~~~~-----~~~~~I~vdGGI~~~~~~~~~~~~a-G--ad~~VvGSaI 220 (237)
T 3cu2_A 156 TLDPRNG---TKYP-SELILDRVIQVEKRLGNR-----RVEKLINIDGSMTLELAKYFKQGTH-Q--IDWLVSGSAL 220 (237)
T ss_dssp SEETTTT---EECC-HHHHHHHHHHHHHHHGGG-----GGGCEEEEESSCCHHHHHHHHHSSS-C--CCCEEECGGG
T ss_pred eeccCcC---Ceec-ChhHHHHHHHHHHHHHhc-----CCCceEEEECCcCHHHHHHHHHhCC-C--CcEEEEeeHH
Confidence 6688543 4444 334444555666655321 2257788899999999999986 4 3 4777886553
No 43
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=75.96 E-value=21 Score=27.65 Aligned_cols=69 Identities=4% Similarity=0.059 Sum_probs=46.9
Q ss_pred HHHHHHHHHhccccCCCceEEEeeeee---------------ecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcE
Q 046110 22 DLGSVVETLCGKISNWDNVVLAYEPVW---------------VIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRI 86 (130)
Q Consensus 22 ~l~~Ql~~~l~~i~~~~~vvIAYEPvW---------------AIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irI 86 (130)
.|.++++..+..+. .+.++.|+|.| .+.++..||+.+++++.+.||+ .+++.
T Consensus 160 ~Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~-----------~~v~~ 226 (284)
T 2prs_A 160 STETQVGNELAPLK--GKGYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVE-----------QKATC 226 (284)
T ss_dssp HHHHHHHHHHGGGT--TCCEEEEESCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHH-----------TTCCE
T ss_pred HHHHHHHHHHhcCC--CCeEEEECccHHHHHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHH-----------cCCCE
Confidence 34444555555442 34567777744 4567899999999999999985 24555
Q ss_pred E-EcCCCCcccHHHHHcc
Q 046110 87 I-YRDTVINSTLQLNIQY 103 (130)
Q Consensus 87 L-YGGSV~~~N~~~l~~~ 103 (130)
+ |=-.+++..++.|.+.
T Consensus 227 if~e~~~~~~~~~~ia~~ 244 (284)
T 2prs_A 227 VFAEPQFRPAVVESVARG 244 (284)
T ss_dssp EEECTTSCSHHHHHHTTT
T ss_pred EEEeCCCChHHHHHHHHH
Confidence 4 5567788888888654
No 44
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=75.87 E-value=3.4 Score=32.84 Aligned_cols=54 Identities=9% Similarity=0.049 Sum_probs=33.6
Q ss_pred cC-CCCCC-ChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCC-CcccHHHHHcccCCCcceEEEeee
Q 046110 50 IG-TGKVA-VPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 50 IG-tG~~a-s~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.| ||... .++.+.+.++.+|+.. ++|++.||-+ +++++++.+.. . -||+.||.+
T Consensus 183 ~GvTG~~~~~~~~~~~~v~~vr~~~----------~~Pv~vGfGIst~e~~~~~~~~-g--ADgvIVGSA 239 (271)
T 3nav_A 183 AGVTGAETKANMPVHALLERLQQFD----------APPALLGFGISEPAQVKQAIEA-G--AAGAISGSA 239 (271)
T ss_dssp C--------CCHHHHHHHHHHHHTT----------CCCEEECSSCCSHHHHHHHHHT-T--CSEEEESHH
T ss_pred cCCCCcccCCchhHHHHHHHHHHhc----------CCCEEEECCCCCHHHHHHHHHc-C--CCEEEECHH
Confidence 56 66542 3566777777777531 4799999999 58999855542 2 389999654
No 45
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=75.38 E-value=17 Score=28.41 Aligned_cols=71 Identities=13% Similarity=0.153 Sum_probs=45.1
Q ss_pred HHHHHHHHHhccccCCCceEEEeeeee---------------ecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCc-
Q 046110 22 DLGSVVETLCGKISNWDNVVLAYEPVW---------------VIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTR- 85 (130)
Q Consensus 22 ~l~~Ql~~~l~~i~~~~~vvIAYEPvW---------------AIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~ir- 85 (130)
.|.++++..+..+. .+.++.|+|.| .+.++..||+.+++++.+.||+. +++
T Consensus 165 ~Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~ 231 (286)
T 3gi1_A 165 QLTEEYTQKFKKVR--SKTFVTQHTAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEY-----------NVKT 231 (286)
T ss_dssp HHHHHHHHHHTTCS--CCEEEEEESCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHT-----------TCCE
T ss_pred HHHHHHHHHHhcCC--CCEEEEECCchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHc-----------CCCE
Confidence 34444555555442 45567888844 45578899999999999999852 344
Q ss_pred EEEcCCCCcccHHHHHcccC
Q 046110 86 IIYRDTVINSTLQLNIQYYY 105 (130)
Q Consensus 86 ILYGGSV~~~N~~~l~~~~~ 105 (130)
|+|==.+++..++.|.+..+
T Consensus 232 if~e~~~~~~~~~~la~~~g 251 (286)
T 3gi1_A 232 IFAEDNVNPKIAHAIAKSTG 251 (286)
T ss_dssp EEECTTSCTHHHHHHHHTTT
T ss_pred EEEeCCCChHHHHHHHHHhC
Confidence 55566778888888876533
No 46
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=74.85 E-value=3.1 Score=33.76 Aligned_cols=39 Identities=8% Similarity=0.069 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCC
Q 046110 63 EVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYP 106 (130)
Q Consensus 63 ~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~ 106 (130)
+-...||+.+.. .+.+++|+-||-||++|+.+|+.....
T Consensus 194 ~Gl~~Lk~Lv~~-----a~~rI~ImaGGGV~~~Ni~~l~~~tG~ 232 (287)
T 3iwp_A 194 EGLPLIKRLIEQ-----AKGRIVVMPGGGITDRNLQRILEGSGA 232 (287)
T ss_dssp TTHHHHHHHHHH-----HTTSSEEEECTTCCTTTHHHHHHHHCC
T ss_pred HhHHHHHHHHHH-----hCCCCEEEECCCcCHHHHHHHHHhhCC
Confidence 344555554432 134799999999999999999875444
No 47
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=74.25 E-value=14 Score=28.92 Aligned_cols=71 Identities=6% Similarity=0.131 Sum_probs=47.4
Q ss_pred HHHHHHHHHhccccCCCceEEEeeeeee-------------cCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCc-EE
Q 046110 22 DLGSVVETLCGKISNWDNVVLAYEPVWV-------------IGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTR-II 87 (130)
Q Consensus 22 ~l~~Ql~~~l~~i~~~~~vvIAYEPvWA-------------IGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~ir-IL 87 (130)
.|.++++..+..+. .+.++.|+|.|. .|.|..|||.++.++.+.||+ .+++ |+
T Consensus 176 ~Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~-----------~~v~~If 242 (291)
T 1pq4_A 176 RLNQELGQILQPLP--QRKFIVFHPSWAYFARDYNLVQIPIEVEGQEPSAQELKQLIDTAKE-----------NNLTMVF 242 (291)
T ss_dssp HHHHHHHHHHTTCS--CCEEEESSCCCHHHHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHT-----------TTCCEEE
T ss_pred HHHHHHHHHHhCCC--CCEEEEECCchHHHHHHCCCEEeecccCCCCCCHHHHHHHHHHHHH-----------cCCCEEE
Confidence 34444555555442 345677777653 456788999999999999984 2455 45
Q ss_pred EcCCCCcccHHHHHcccC
Q 046110 88 YRDTVINSTLQLNIQYYY 105 (130)
Q Consensus 88 YGGSV~~~N~~~l~~~~~ 105 (130)
|=-.+++..++.|.+..+
T Consensus 243 ~e~~~~~~~~~~ia~~~g 260 (291)
T 1pq4_A 243 GETQFSTKSSEAIAAEIG 260 (291)
T ss_dssp EETTSCCHHHHHHHHHHT
T ss_pred EeCCCChHHHHHHHHHcC
Confidence 677888888888866533
No 48
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=74.04 E-value=3.1 Score=32.88 Aligned_cols=54 Identities=19% Similarity=0.083 Sum_probs=35.0
Q ss_pred ecC-CCCCC-ChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCC-CcccHHHHHcccCCCcceEEEeee
Q 046110 49 VIG-TGKVA-VPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 49 AIG-tG~~a-s~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
-.| ||... .++.+.+..+.+|+. .++|+++|+-+ ++++++++.+. -||+.||.+
T Consensus 173 ~~GvTG~~~~~~~~~~~~v~~vr~~----------~~~Pv~vGfGIst~e~a~~~~~~----ADGVIVGSA 229 (252)
T 3tha_A 173 SIGITGTKSVEEAILQDKVKEIRSF----------TNLPIFVGFGIQNNQDVKRMRKV----ADGVIVGTS 229 (252)
T ss_dssp CSCSSSCSHHHHHHHHHHHHHHHTT----------CCSCEEEESSCCSHHHHHHHTTT----SSEEEECHH
T ss_pred cCCCCCcccCCCHHHHHHHHHHHHh----------cCCcEEEEcCcCCHHHHHHHHhc----CCEEEECHH
Confidence 457 66542 133445555555532 24799999999 88999888642 499999544
No 49
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=73.94 E-value=6 Score=29.55 Aligned_cols=31 Identities=3% Similarity=-0.184 Sum_probs=25.5
Q ss_pred cCcEEEcCCCCc-ccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVIN-STLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~-~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
+++|+.||.|+. +|+.+++.. ..||+.+|.+
T Consensus 191 ~~pi~~~GGI~~~e~i~~~~~~---Gad~vivGsa 222 (248)
T 1geq_A 191 RNKVAVGFGVSKREHVVSLLKE---GANGVVVGSA 222 (248)
T ss_dssp SSCEEEESCCCSHHHHHHHHHT---TCSEEEECHH
T ss_pred CCCEEEEeecCCHHHHHHHHHc---CCCEEEEcHH
Confidence 479999999999 999999763 4588888654
No 50
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=73.69 E-value=6.4 Score=28.79 Aligned_cols=31 Identities=6% Similarity=-0.075 Sum_probs=24.7
Q ss_pred cCcEEEcCCCCc-ccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVIN-STLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~-~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++.+|-++. +|+.+++. ...||+++|.+
T Consensus 198 ~~pvia~GGi~~~~~~~~~~~---~Ga~~v~vgsa 229 (253)
T 1h5y_A 198 RIPVIASGGAGRVEHFYEAAA---AGADAVLAASL 229 (253)
T ss_dssp SSCEEEESCCCSHHHHHHHHH---TTCSEEEESHH
T ss_pred CCCEEEeCCCCCHHHHHHHHH---cCCcHHHHHHH
Confidence 478999999984 99999985 24589999554
No 51
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=73.57 E-value=4.5 Score=31.68 Aligned_cols=25 Identities=16% Similarity=-0.017 Sum_probs=21.0
Q ss_pred cCcCcEEEcCCCCcccHHHHHcccC
Q 046110 81 AASTRIIYRDTVINSTLQLNIQYYY 105 (130)
Q Consensus 81 a~~irILYGGSV~~~N~~~l~~~~~ 105 (130)
+.++.|+-||-|+++|+.+|++...
T Consensus 176 ~~ri~Im~GgGV~~~Ni~~l~~~tG 200 (224)
T 2bdq_A 176 NNRIEIMVGGGVTAENYQYICQETG 200 (224)
T ss_dssp TTSSEEEECSSCCTTTHHHHHHHHT
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhhC
Confidence 3478999999999999999986533
No 52
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=70.71 E-value=3.2 Score=30.91 Aligned_cols=36 Identities=8% Similarity=-0.096 Sum_probs=26.9
Q ss_pred cCcEEEcCCCCc-ccHHHHHcccCCCcceEEEeeeec
Q 046110 83 STRIIYRDTVIN-STLQLNIQYYYPNLFIELTLAFSI 118 (130)
Q Consensus 83 ~irILYGGSV~~-~N~~~l~~~~~~dvdG~Lig~~s~ 118 (130)
++||++.|-++. +|+.+++....-..||+++|.+-.
T Consensus 193 ~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~ 229 (244)
T 2y88_A 193 DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALY 229 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHH
Confidence 589999888885 999999864200469999976543
No 53
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=68.48 E-value=6.3 Score=29.36 Aligned_cols=31 Identities=10% Similarity=-0.031 Sum_probs=24.7
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++.+|-++ ++|+.++++ ...||+++|.+
T Consensus 196 ~ipvia~GGI~~~~d~~~~~~---~Gadgv~vgsa 227 (252)
T 1ka9_F 196 GVPVIASGGAGRMEHFLEAFQ---AGAEAALAASV 227 (252)
T ss_dssp SSCEEEESCCCSHHHHHHHHH---TTCSEEEESHH
T ss_pred CCCEEEeCCCCCHHHHHHHHH---CCCHHHHHHHH
Confidence 57999988888 599999985 24599999554
No 54
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=67.71 E-value=36 Score=26.31 Aligned_cols=72 Identities=10% Similarity=0.135 Sum_probs=47.9
Q ss_pred HHHHHHHHhccccCCCceEEEeeeee---------------ecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCc-E
Q 046110 23 LGSVVETLCGKISNWDNVVLAYEPVW---------------VIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTR-I 86 (130)
Q Consensus 23 l~~Ql~~~l~~i~~~~~vvIAYEPvW---------------AIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~ir-I 86 (130)
|.++++..+..+. .+.++.|+|.| .+.++..||+.++.++.+.||+. +++ |
T Consensus 164 Ld~~~~~~l~~~~--~~~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~-----------~v~~i 230 (284)
T 3cx3_A 164 LTKKFQPKFEKAT--QKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTY-----------KVKTI 230 (284)
T ss_dssp HHHHHHHHHHSCS--CCCEEEEESCCHHHHHHTTCCEEEEECSSTTCCCCSHHHHHHHHHHHHT-----------TCCCE
T ss_pred HHHHHHHHHhcCC--CCEEEEECCchHHHHHHcCCEEeeccCCCCCCCCCHHHHHHHHHHHHHc-----------CCCEE
Confidence 4444444454432 34456666654 45678999999999999999852 344 5
Q ss_pred EEcCCCCcccHHHHHcccCCC
Q 046110 87 IYRDTVINSTLQLNIQYYYPN 107 (130)
Q Consensus 87 LYGGSV~~~N~~~l~~~~~~d 107 (130)
+|-=.+++..++.|.+..+..
T Consensus 231 f~e~~~~~~~~~~ia~~~g~~ 251 (284)
T 3cx3_A 231 FTESNASSKVAETLVKSTGVG 251 (284)
T ss_dssp EECSSSCCHHHHHHHSSSSCC
T ss_pred EEeCCCCcHHHHHHHHHcCCe
Confidence 567788888889987654443
No 55
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=66.93 E-value=4.1 Score=29.64 Aligned_cols=31 Identities=10% Similarity=-0.016 Sum_probs=25.6
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
+++++-+|.++++|++++++. ..||+.+|.+
T Consensus 159 ~~~i~~~gGI~~~~~~~~~~~---Gad~vvvGsa 189 (211)
T 3f4w_A 159 KARIAVAGGISSQTVKDYALL---GPDVVIVGSA 189 (211)
T ss_dssp SCEEEEESSCCTTTHHHHHTT---CCSEEEECHH
T ss_pred CCcEEEECCCCHHHHHHHHHc---CCCEEEECHH
Confidence 478999999999999999864 4589999654
No 56
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=66.26 E-value=4.2 Score=31.53 Aligned_cols=32 Identities=0% Similarity=-0.159 Sum_probs=24.6
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
+++|..||-++ ++|+++.+.. .. ||+.+|.+-
T Consensus 205 ~~pi~vggGI~t~e~~~~~~~a-gA--D~vVVGSai 237 (268)
T 1qop_A 205 AAPALQGFGISSPEQVSAAVRA-GA--AGAISGSAI 237 (268)
T ss_dssp CCCEEEESSCCSHHHHHHHHHT-TC--SEEEECHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHc-CC--CEEEEChHH
Confidence 47899999998 9999995432 33 899996553
No 57
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=65.44 E-value=18 Score=28.70 Aligned_cols=46 Identities=4% Similarity=0.070 Sum_probs=33.6
Q ss_pred eecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEE-EcCCCCcccHHHHHccc
Q 046110 48 WVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRII-YRDTVINSTLQLNIQYY 104 (130)
Q Consensus 48 WAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irIL-YGGSV~~~N~~~l~~~~ 104 (130)
+.+.++..||+.+++++.+.||+ .+++.+ |==.+++..++.|.+..
T Consensus 215 ~~~~~~~eps~~~l~~l~~~ik~-----------~~v~~If~e~~~~~~~~~~ia~e~ 261 (312)
T 2o1e_A 215 AGLSPDQEPSAASLAKLKTYAKE-----------HNVKVIYFEEIASSKVADTLASEI 261 (312)
T ss_dssp SSCCSSSCCCHHHHHHHHHHTTS-----------SCCCEEECSSCCCHHHHHHHHHHT
T ss_pred eccCCCCCCCHHHHHHHHHHHHH-----------cCCCEEEEeCCCChHHHHHHHHHh
Confidence 34556899999999999998873 345544 46677777788887653
No 58
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=64.31 E-value=5.1 Score=29.89 Aligned_cols=35 Identities=6% Similarity=-0.108 Sum_probs=26.7
Q ss_pred cCcEEEcCCCCc-ccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTVIN-STLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV~~-~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
++|++..|.++. +|+.++++......||+++|.+-
T Consensus 190 ~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al 225 (244)
T 1vzw_A 190 DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKAL 225 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHH
T ss_pred CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHH
Confidence 579999888885 99999986531146999996653
No 59
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=63.79 E-value=12 Score=28.62 Aligned_cols=60 Identities=15% Similarity=0.196 Sum_probs=38.0
Q ss_pred EeeeeeecCCCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEe
Q 046110 43 AYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTL 114 (130)
Q Consensus 43 AYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig 114 (130)
+.+|-.. |+...++.. +-++.+|+.+.+. +-+++|.=.|.||++|+.++... +. |++.+|
T Consensus 136 sV~pGfg---gQ~f~~~~l-~kI~~lr~~~~~~-----~~~~~I~VdGGI~~~~~~~~~~a-GA--d~~V~G 195 (231)
T 3ctl_A 136 TVDPGFA---GQPFIPEML-DKLAELKAWRERE-----GLEYEIEVDGSCNQATYEKLMAA-GA--DVFIVG 195 (231)
T ss_dssp SSCTTCS---SCCCCTTHH-HHHHHHHHHHHHH-----TCCCEEEEESCCSTTTHHHHHHH-TC--CEEEEC
T ss_pred eeccCcC---CccccHHHH-HHHHHHHHHHhcc-----CCCceEEEECCcCHHHHHHHHHc-CC--CEEEEc
Confidence 5677442 444444333 3445666655431 22467888999999999999864 34 767775
No 60
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=63.68 E-value=3.4 Score=32.69 Aligned_cols=42 Identities=7% Similarity=-0.153 Sum_probs=31.7
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeecccccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSC 127 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~ 127 (130)
++||+..|.+ +++.+.+++.... .|++++|.+.+ .+|+-|..
T Consensus 183 ~ipVi~~GgI~s~~da~~~l~~~g--ad~V~iGR~~l-~~P~l~~~ 225 (318)
T 1vhn_A 183 RIPTFVSGDIFTPEDAKRALEESG--CDGLLVARGAI-GRPWIFKQ 225 (318)
T ss_dssp SSCEEEESSCCSHHHHHHHHHHHC--CSEEEESGGGT-TCTTHHHH
T ss_pred CCeEEEECCcCCHHHHHHHHHcCC--CCEEEECHHHH-hCcchHHH
Confidence 6899997776 8899999987433 59999988765 45655544
No 61
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=63.56 E-value=9 Score=29.68 Aligned_cols=31 Identities=6% Similarity=-0.104 Sum_probs=24.9
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++-||-++ ++|+.+++.. -.||++||.+
T Consensus 178 ~iPviv~gGI~t~eda~~~~~~---GAdgViVGSA 209 (264)
T 1xm3_A 178 KVPVIVDAGIGSPKDAAYAMEL---GADGVLLNTA 209 (264)
T ss_dssp SSCBEEESCCCSHHHHHHHHHT---TCSEEEESHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHc---CCCEEEEcHH
Confidence 57899988885 9999999864 3499999655
No 62
>3dhf_A Nicotinamide phosphoribosyltransferase; NMPRTASE, NAMPRTASE, visfatin, beryllium fluoride, nicotinamide D-ribonucleotide, pyrophosphate; HET: NMN; 1.80A {Homo sapiens} PDB: 3dgr_A* 3dhd_A* 3dkj_A* 3dkl_A* 2gvj_A* 2gvg_A* 2e5b_A 2e5c_A* 2e5d_A 2h3d_A* 2gvl_A 2h3b_A 2g95_A 2g96_A* 2g97_A* 3g8e_A*
Probab=63.42 E-value=4.6 Score=34.86 Aligned_cols=65 Identities=14% Similarity=-0.129 Sum_probs=45.3
Q ss_pred CCCCChHHHHHHHHHHHHHHHhccChh---hc----C-cCcEEEcCCCCcccHHH----HHcccCCCcceEEEeeeec
Q 046110 53 GKVAVPAQAQEVHAELRKWLKDNVNAE---VA----A-STRIIYRDTVINSTLQL----NIQYYYPNLFIELTLAFSI 118 (130)
Q Consensus 53 G~~as~~~i~~v~~~IR~~l~~~~~~~---~a----~-~irILYGGSV~~~N~~~----l~~~~~~dvdG~Lig~~s~ 118 (130)
|..+++-+..+....+|+.+.+.+|.+ .+ . +++|+|+++++.+-+.+ |.. .+..+|.+..|.|+.
T Consensus 309 gVR~DSGD~~~~~~~vr~~Ld~~fG~~~n~~G~kvl~~~~~Ii~Sd~Lde~~~~~ii~~l~~-~G~~~d~v~fGvGT~ 385 (484)
T 3dhf_A 309 IIRPDSGNPLDTVLKVLEILGKKFPVTENSKGYKLLPPYLRVIQGDGVDINTLQEIVEGMKQ-KMWSIENIAFGSGGG 385 (484)
T ss_dssp EEECCSSCHHHHHHHHHHHHHHHSCCEECTTSCEECCTTEEEEECSSCSHHHHHHHHHHHHH-TTBCGGGEEEEESHH
T ss_pred EEECCCCChHHHHHHHHHHHHHHhCCcccccccccCCCCEEEEEcCCCCHHHHHHHHHHHHh-CCCCcccceEcccCc
Confidence 555666666777778888887766543 11 2 67999999999999544 443 245568777787764
No 63
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=62.83 E-value=7.4 Score=28.45 Aligned_cols=30 Identities=10% Similarity=-0.167 Sum_probs=24.3
Q ss_pred CcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 84 TRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 84 irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
+|++=+|-++++|+.+++.. ..||+.+|.+
T Consensus 173 ~pvia~GGI~~~nv~~~~~~---Ga~gv~vgs~ 202 (227)
T 2tps_A 173 IPIVGIGGITIDNAAPVIQA---GADGVSMISA 202 (227)
T ss_dssp CCEEEESSCCTTTSHHHHHT---TCSEEEESHH
T ss_pred CCEEEEcCCCHHHHHHHHHc---CCCEEEEhHH
Confidence 78988999999999998763 3488888554
No 64
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=61.66 E-value=5.8 Score=29.66 Aligned_cols=35 Identities=6% Similarity=-0.051 Sum_probs=25.8
Q ss_pred cCcEEEcCCCC-cccHHHHHccc--CCC-cceEEEeeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYY--YPN-LFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~--~~d-vdG~Lig~~s 117 (130)
++|++.+|-++ ++++.++++.. ... .||++||.+-
T Consensus 188 ~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal 226 (241)
T 1qo2_A 188 EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAF 226 (241)
T ss_dssp TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHH
T ss_pred CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHH
Confidence 47899988888 59999998652 113 5999996543
No 65
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=60.19 E-value=6.5 Score=28.37 Aligned_cols=31 Identities=0% Similarity=-0.106 Sum_probs=25.1
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++-+|.++++|+.+++.. ..||+.+|.+
T Consensus 162 ~~pvia~GGI~~~nv~~~~~~---Ga~gv~vgs~ 192 (215)
T 1xi3_A 162 KIPVVAIGGINKDNAREVLKT---GVDGIAVISA 192 (215)
T ss_dssp SSCEEEESSCCTTTHHHHHTT---TCSEEEESHH
T ss_pred CCCEEEECCcCHHHHHHHHHc---CCCEEEEhHH
Confidence 478999999999999999763 4588888654
No 66
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=59.63 E-value=7.1 Score=29.09 Aligned_cols=32 Identities=9% Similarity=-0.102 Sum_probs=25.4
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
++|++.+|-++ ++|+.++++ ...||+++|.+-
T Consensus 195 ~ipvia~GGI~~~~d~~~~~~---~Gadgv~vGsal 227 (253)
T 1thf_D 195 TLPIIASGGAGKMEHFLEAFL---AGADAALAASVF 227 (253)
T ss_dssp CSCEEEESCCCSHHHHHHHHH---TTCSEEEESHHH
T ss_pred CCCEEEECCCCCHHHHHHHHH---cCChHHHHHHHH
Confidence 57999989898 599999985 345999996543
No 67
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=58.03 E-value=11 Score=28.78 Aligned_cols=52 Identities=13% Similarity=-0.052 Sum_probs=35.3
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 52 TGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 52 tG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
+|+...++..++ ++.+|+. . .+.+|.-.|.+|++|++++... +. |++.+|.+
T Consensus 148 ~Gq~f~~~~l~k-i~~lr~~----~-----~~~~I~VdGGI~~~t~~~~~~a-GA--d~~VvGsa 199 (228)
T 3ovp_A 148 GGQKFMEDMMPK-VHWLRTQ----F-----PSLDIEVDGGVGPDTVHKCAEA-GA--NMIVSGSA 199 (228)
T ss_dssp CSCCCCGGGHHH-HHHHHHH----C-----TTCEEEEESSCSTTTHHHHHHH-TC--CEEEESHH
T ss_pred CCcccCHHHHHH-HHHHHHh----c-----CCCCEEEeCCcCHHHHHHHHHc-CC--CEEEEeHH
Confidence 677766666554 3445542 1 1467888999999999999864 44 77777544
No 68
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=57.53 E-value=8.7 Score=30.89 Aligned_cols=57 Identities=14% Similarity=0.053 Sum_probs=36.4
Q ss_pred eeeee-cCCCCCC-ChHHHHHHHHHHHHHHHhccChhhcCcCcEEEc-CCCCcccHHHHHcccCCCcceEEEeeeec
Q 046110 45 EPVWV-IGTGKVA-VPAQAQEVHAELRKWLKDNVNAEVAASTRIIYR-DTVINSTLQLNIQYYYPNLFIELTLAFSI 118 (130)
Q Consensus 45 EPvWA-IGtG~~a-s~~~i~~v~~~IR~~l~~~~~~~~a~~irILYG-GSV~~~N~~~l~~~~~~dvdG~Lig~~s~ 118 (130)
+|.=+ ||||... +++.+ +.|++ . .++|++-+ |=-+|+.++..|.. + .||+|+|.|=.
T Consensus 161 mPlg~pIGsG~Gi~~~~lI----~~I~e----~------~~vPVI~eGGI~TPsDAa~AmeL-G--AdgVlVgSAI~ 220 (265)
T 1wv2_A 161 MPLAGLIGSGLGICNPYNL----RIILE----E------AKVPVLVDAGVGTASDAAIAMEL-G--CEAVLMNTAIA 220 (265)
T ss_dssp EECSSSTTCCCCCSCHHHH----HHHHH----H------CSSCBEEESCCCSHHHHHHHHHH-T--CSEEEESHHHH
T ss_pred EeCCccCCCCCCcCCHHHH----HHHHh----c------CCCCEEEeCCCCCHHHHHHHHHc-C--CCEEEEChHHh
Confidence 66333 9999755 55554 33332 1 14677775 55667899998875 4 48999966543
No 69
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=55.39 E-value=6.5 Score=32.06 Aligned_cols=42 Identities=12% Similarity=-0.206 Sum_probs=31.8
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeecccccccccc
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSC 127 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~ 127 (130)
+++++-+|.++++++++++... ..|++.+|.+.+ .||+-|..
T Consensus 294 ~iPvi~~Ggit~~~a~~~l~~g--~aD~V~~gR~~l-~~P~~~~~ 335 (364)
T 1vyr_A 294 HGVIIGAGAYTAEKAEDLIGKG--LIDAVAFGRDYI-ANPDLVAR 335 (364)
T ss_dssp CSEEEEESSCCHHHHHHHHHTT--SCSEEEESHHHH-HCTTHHHH
T ss_pred CCCEEEECCcCHHHHHHHHHCC--CccEEEECHHHH-hChhHHHH
Confidence 5789999999999999999753 358899987765 35554433
No 70
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=54.69 E-value=10 Score=30.25 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=27.3
Q ss_pred CCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHH
Q 046110 53 GKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNI 101 (130)
Q Consensus 53 G~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~ 101 (130)
|..++.. +-...||+.+.. . + ++.|+-||-|+++|+.+|+
T Consensus 149 G~~~~a~---~g~~~L~~Lv~~-a----~-~i~Im~GgGv~~~Ni~~l~ 188 (256)
T 1twd_A 149 GQKSDAL---QGLSKIMELIAH-R----D-APIIMAGAGVRAENLHHFL 188 (256)
T ss_dssp TTSSSTT---TTHHHHHHHHTS-S----S-CCEEEEESSCCTTTHHHHH
T ss_pred CCCCCHH---HHHHHHHHHHHh-h----C-CcEEEecCCcCHHHHHHHH
Confidence 4444433 344555554432 1 2 7899999999999999998
No 71
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=54.47 E-value=18 Score=29.14 Aligned_cols=48 Identities=4% Similarity=-0.119 Sum_probs=34.3
Q ss_pred CChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeeccc
Q 046110 56 AVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRY 120 (130)
Q Consensus 56 as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~ 120 (130)
.++++++++.+.++ .++++---|-+|++|++++... .+|.+=+ |++-+
T Consensus 227 ~~~~~l~~av~~~~------------~~v~ieaSGGIt~~~i~~~a~t---GVD~Isv--Galt~ 274 (287)
T 3tqv_A 227 FSGEDIDIAVSIAR------------GKVALEVSGNIDRNSIVAIAKT---GVDFISV--GAITK 274 (287)
T ss_dssp CCHHHHHHHHHHHT------------TTCEEEEESSCCTTTHHHHHTT---TCSEEEC--SHHHH
T ss_pred CCHHHHHHHHHhhc------------CCceEEEECCCCHHHHHHHHHc---CCCEEEE--Chhhc
Confidence 67777777776654 2567888999999999999863 5674444 55533
No 72
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=54.38 E-value=9.1 Score=28.79 Aligned_cols=43 Identities=7% Similarity=-0.210 Sum_probs=26.8
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeeeeccc--cccccccc
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAFSIRY--QGDVFSCI 128 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~s~~~--~~~~F~~I 128 (130)
.+|++.+|.++ ++.+.+++.. ..||+++|.+...- +++.+.++
T Consensus 74 ~iPvi~~ggi~~~~~i~~~~~~---Gad~v~lg~~~~~~~~~~~~~~~~ 119 (266)
T 2w6r_A 74 TLPIIASGGAGKMEHFLEAFLA---GADKALAASVFHFREIDMRELKEY 119 (266)
T ss_dssp CSCEEEESCCCSTHHHHHHHHH---TCSEEECCCCC------CHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHc---CCcHhhhhHHHHhCCCCHHHHHHH
Confidence 57999977776 4777777753 46899995544311 55555554
No 73
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei}
Probab=53.90 E-value=13 Score=26.20 Aligned_cols=29 Identities=28% Similarity=0.363 Sum_probs=24.0
Q ss_pred eeeecCCCCCCChHHHHHHHHHHHHHHHh
Q 046110 46 PVWVIGTGKVAVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 46 PvWAIGtG~~as~~~i~~v~~~IR~~l~~ 74 (130)
|+|.-+.....++++.+++.+.||+.+.+
T Consensus 107 ~vw~~~~~~~~~~eel~~~~~~ir~~L~~ 135 (137)
T 3ohe_A 107 PVWGKQPPVPYTEEQQASVKAKLQPLLEQ 135 (137)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 67765566778899999999999998864
No 74
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=53.83 E-value=9.3 Score=27.85 Aligned_cols=32 Identities=9% Similarity=-0.220 Sum_probs=25.9
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
+++|+-.|-++++|+.++++. ..||+.+|.+-
T Consensus 148 ~ipvia~GGI~~~~i~~~~~~---Ga~gv~vGsai 179 (212)
T 2v82_A 148 DIAVFAVGGVTPENLAQWIDA---GCAGAGLGSDL 179 (212)
T ss_dssp TCEEEEESSCCTTTHHHHHHH---TCSEEEECTTT
T ss_pred CCeEEEeCCCCHHHHHHHHHc---CCCEEEEChHH
Confidence 488999999999999999874 45888886543
No 75
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=53.15 E-value=22 Score=28.95 Aligned_cols=48 Identities=4% Similarity=-0.153 Sum_probs=34.7
Q ss_pred CCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeecc
Q 046110 55 VAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIR 119 (130)
Q Consensus 55 ~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~ 119 (130)
.++|+++.++.+.++ .++.+---|.+|++|++++.. ..||.+=+ |++-
T Consensus 235 n~s~~~l~~av~~~~------------~~v~leaSGGIt~~~i~~~A~---tGVD~Isv--Galt 282 (300)
T 3l0g_A 235 NMSISEIKKAVDIVN------------GKSVLEVSGCVNIRNVRNIAL---TGVDYISI--GCIT 282 (300)
T ss_dssp SCCHHHHHHHHHHHT------------TSSEEEEESSCCTTTHHHHHT---TTCSEEEC--GGGT
T ss_pred CCCHHHHHHHHHhhc------------CceEEEEECCCCHHHHHHHHH---cCCCEEEe--Cccc
Confidence 367888887777664 246788899999999999986 35675444 5543
No 76
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=52.95 E-value=16 Score=28.01 Aligned_cols=31 Identities=10% Similarity=-0.279 Sum_probs=19.2
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++|+|-|+ |.++|...... ++|+++|.|
T Consensus 196 ~ipviasGGv~--~~~Dl~~l~~~-~~gvivg~A 226 (243)
T 4gj1_A 196 NICIQASGGVA--SLKDLENLKGI-CSGVIVGKA 226 (243)
T ss_dssp TSEEEEESCCC--SHHHHHHTTTT-CSEEEECHH
T ss_pred CCCEEEEcCCC--CHHHHHHHHcc-CchhehHHH
Confidence 57999966664 34444433333 789999543
No 77
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=52.15 E-value=23 Score=27.53 Aligned_cols=56 Identities=13% Similarity=0.100 Sum_probs=34.8
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 52 TGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 52 tG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.|+..-++..++ ++.+|+.+.++ +-+++|.-.|.||++|++++.+. + .|.+.+|.+
T Consensus 170 gGQ~fi~~~l~K-I~~lr~~~~~~-----~~~~~I~VDGGI~~~ti~~~~~a-G--AD~~V~GSa 225 (246)
T 3inp_A 170 GGQKFIPAMLDK-AKEISKWISST-----DRDILLEIDGGVNPYNIAEIAVC-G--VNAFVAGSA 225 (246)
T ss_dssp --CCCCTTHHHH-HHHHHHHHHHH-----TSCCEEEEESSCCTTTHHHHHTT-T--CCEEEESHH
T ss_pred CCcccchHHHHH-HHHHHHHHHhc-----CCCeeEEEECCcCHHHHHHHHHc-C--CCEEEEehH
Confidence 455554544443 44566555432 23578888999999999999863 3 476777543
No 78
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=52.08 E-value=7.4 Score=31.42 Aligned_cols=41 Identities=2% Similarity=-0.169 Sum_probs=31.8
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeeccccccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCI 128 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I 128 (130)
+++|+..|.+ +++.+.+++. . .||+++|.+.+ .+|.-|.+|
T Consensus 197 ~iPVianGgI~s~eda~~~l~--G--aD~V~iGRa~l-~~P~l~~~i 238 (350)
T 3b0p_A 197 QLTFVTNGGIRSLEEALFHLK--R--VDGVMLGRAVY-EDPFVLEEA 238 (350)
T ss_dssp TSEEEEESSCCSHHHHHHHHT--T--SSEEEECHHHH-HCGGGGTTH
T ss_pred CCeEEEECCcCCHHHHHHHHh--C--CCEEEECHHHH-hCcHHHHHH
Confidence 5799998887 7899999985 3 69999988766 466666554
No 79
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=51.91 E-value=11 Score=30.00 Aligned_cols=42 Identities=5% Similarity=-0.284 Sum_probs=31.1
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeecccccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSC 127 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~ 127 (130)
+++|+-+|.+ +++++.+++... ..|++.+|.+.+ .||+-+..
T Consensus 277 ~iPVi~~Ggi~s~~~a~~~l~~G--~aD~V~iGR~~i-~nPdl~~k 319 (338)
T 1z41_A 277 DMATGAVGMITDGSMAEEILQNG--RADLIFIGRELL-RDPFFART 319 (338)
T ss_dssp CCEEEECSSCCSHHHHHHHHHTT--SCSEEEECHHHH-HCTTHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHcC--CceEEeecHHHH-hCchHHHH
Confidence 4789999998 799999999752 358889977765 35554443
No 80
>2i14_A Nicotinate-nucleotide pyrophosphorylase; ligand binding, phosphoribosylpyrophosphate, Zn metal ION, structural genomics, PSI; HET: PCP; 2.90A {Pyrococcus furiosus} SCOP: c.1.17.1 d.41.2.1
Probab=51.47 E-value=11 Score=31.26 Aligned_cols=41 Identities=12% Similarity=0.085 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcc
Q 046110 59 AQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQY 103 (130)
Q Consensus 59 ~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~ 103 (130)
.+..+..+.+|+.+.+. | ..+++|...|+++.+|+.+|...
T Consensus 248 gd~~~~v~~~r~~ld~~-G---~~~~~I~aSggl~~~~i~~l~~~ 288 (395)
T 2i14_A 248 GNFRKIIEEVRWELKVR-G---YDWVKIFVSGGLDEEKIKEIVDV 288 (395)
T ss_dssp SCHHHHHHHHHHHHHHT-T---CCSCEEEEESSCCHHHHHTTGGG
T ss_pred ccHHHHHHHHHHHHHhC-C---CCceEEEEECCCCHHHHHHHHHh
Confidence 77778888888877653 1 12578999999999999999876
No 81
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=51.16 E-value=7.9 Score=30.36 Aligned_cols=42 Identities=5% Similarity=-0.108 Sum_probs=28.3
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeecccccccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCIC 129 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~ 129 (130)
.+|+++||-+ +++.++++.+ . .||+.||-+-.. |++.|.+++
T Consensus 186 ~~pv~vGfGI~~~e~a~~~~~--g--AD~VVVGSai~~-~~~~~~e~v 228 (235)
T 3w01_A 186 ETQLFYGGGISSEQQATEMAA--I--ADTIIVGDIIYK-DIKKALKTV 228 (235)
T ss_dssp SSEEEEESCCCSHHHHHHHHT--T--SSEEEECTHHHH-CHHHHHHTT
T ss_pred CCCEEEECCcCCHHHHHHHHc--C--CCEEEECCceec-CHHHHHHHH
Confidence 4799998888 5677777664 3 489999665442 556555543
No 82
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=49.62 E-value=13 Score=27.84 Aligned_cols=31 Identities=10% Similarity=-0.102 Sum_probs=24.8
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++.+|-++ ++++.+++.. ..||+++|.+
T Consensus 200 ~ipvia~GGI~~~ed~~~~~~~---Gadgv~vgsa 231 (266)
T 2w6r_A 200 TLPIIASGGAGKMEHFLEAFLA---GADAALAASV 231 (266)
T ss_dssp CSCEEEESCCCSHHHHHHHHHH---TCSEEEESTT
T ss_pred CCCEEEeCCCCCHHHHHHHHHc---CCHHHHccHH
Confidence 57999988888 5999999852 3599999654
No 83
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=48.81 E-value=7.8 Score=31.82 Aligned_cols=41 Identities=12% Similarity=-0.103 Sum_probs=31.4
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeeccccccccc
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFS 126 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~ 126 (130)
+++++-.|.++++++++++... ..|++.+|.+.+ .||+-|.
T Consensus 299 ~iPvi~~Ggi~~~~a~~~l~~g--~aD~V~igR~~l-~~P~l~~ 339 (377)
T 2r14_A 299 KGGLIYCGNYDAGRAQARLDDN--TADAVAFGRPFI-ANPDLPE 339 (377)
T ss_dssp CSEEEEESSCCHHHHHHHHHTT--SCSEEEESHHHH-HCTTHHH
T ss_pred CCCEEEECCCCHHHHHHHHHCC--CceEEeecHHHH-hCchHHH
Confidence 4789999999999999999753 358899987766 3555443
No 84
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=48.32 E-value=8.8 Score=31.26 Aligned_cols=42 Identities=12% Similarity=-0.171 Sum_probs=31.4
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeecccccccccc
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSC 127 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~ 127 (130)
+++++-.|.++++++.+++... ..|++.+|.+.+ .||+-+..
T Consensus 293 ~iPvi~~Ggi~~~~a~~~l~~g--~aD~V~igR~~i-~~P~l~~~ 334 (365)
T 2gou_A 293 QGVLIYAGRYNAEKAEQAINDG--LADMIGFGRPFI-ANPDLPER 334 (365)
T ss_dssp CSEEEEESSCCHHHHHHHHHTT--SCSEEECCHHHH-HCTTHHHH
T ss_pred CCcEEEeCCCCHHHHHHHHHCC--CcceehhcHHHH-hCchHHHH
Confidence 4789998999999999999753 358899987765 35554433
No 85
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=48.29 E-value=18 Score=28.02 Aligned_cols=34 Identities=12% Similarity=-0.056 Sum_probs=24.8
Q ss_pred cCcEEEc-CCCCcccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYR-DTVINSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYG-GSV~~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
.+|++++ |--+++.+++++... ...||+++|.+-
T Consensus 205 ~iPVIasGGi~s~ed~~~l~~~~-~G~~gvivg~al 239 (260)
T 2agk_A 205 DLKIVYAGGAKSVDDLKLVDELS-HGKVDLTFGSSL 239 (260)
T ss_dssp SCEEEEESCCCCTHHHHHHHHHH-TTCEEEECCTTB
T ss_pred CceEEEeCCCCCHHHHHHHHHhc-CCCCEEEeeCCH
Confidence 5799995 555779999998753 146999996553
No 86
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=48.08 E-value=18 Score=28.05 Aligned_cols=30 Identities=7% Similarity=0.045 Sum_probs=22.2
Q ss_pred cCcEEEcCCCCc-ccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVIN-STLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~-~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.+|+++||-++. +.++++++ . .||+.||-+
T Consensus 182 ~~Pv~vGgGI~t~e~a~~~~~--g--Ad~VIVGSa 212 (240)
T 1viz_A 182 TSTLFYGGGIKDAETAKQYAE--H--ADVIVVGNA 212 (240)
T ss_dssp SSEEEEESSCCSHHHHHHHHT--T--CSEEEECTH
T ss_pred CCCEEEEeccCCHHHHHHHHh--C--CCEEEEChH
Confidence 479999888874 77888764 3 489999544
No 87
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=47.73 E-value=36 Score=27.51 Aligned_cols=50 Identities=4% Similarity=-0.187 Sum_probs=34.5
Q ss_pred CChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeeccccc
Q 046110 56 AVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQG 122 (130)
Q Consensus 56 as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~ 122 (130)
.+++++.++.+.++ .++++.--|-++++|++++... .+|++ +.|++-+++
T Consensus 238 ~~~~~l~~av~~i~------------~~v~ieaSGGI~~~~i~~~a~t---GVD~i--svG~lt~sa 287 (298)
T 3gnn_A 238 FTLDMMRDAVRVTE------------GRAVLEVSGGVNFDTVRAIAET---GVDRI--SIGALTKDV 287 (298)
T ss_dssp CCHHHHHHHHHHHT------------TSEEEEEESSCSTTTHHHHHHT---TCSEE--ECGGGGTSC
T ss_pred CCHHHHHHHHHHhC------------CCCeEEEEcCCCHHHHHHHHHc---CCCEE--EECCeecCC
Confidence 56777776666541 2567888999999999999863 45744 446654543
No 88
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=47.38 E-value=24 Score=26.05 Aligned_cols=31 Identities=3% Similarity=-0.103 Sum_probs=24.5
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++++.=+|.++++|+.+++.. -.|++-+|.+
T Consensus 166 ~~pi~v~GGI~~~~~~~~~~a---GAd~vvvGsa 196 (218)
T 3jr2_A 166 GIELSITGGIVPEDIYLFEGI---KTKTFIAGRA 196 (218)
T ss_dssp TCEEEEESSCCGGGGGGGTTS---CEEEEEESGG
T ss_pred CCCEEEECCCCHHHHHHHHHc---CCCEEEEchh
Confidence 478888999999999998753 3588888644
No 89
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=45.74 E-value=4.3 Score=30.54 Aligned_cols=32 Identities=6% Similarity=-0.241 Sum_probs=0.0
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
++|++..|-++ ++++.+++.. ..||+++|.+-
T Consensus 200 ~iPvia~GGI~~~~d~~~~~~~---Gad~v~vg~al 232 (247)
T 3tdn_A 200 TLPIIASGGAGKMEHFLEAFLR---GADKVSINTAA 232 (247)
T ss_dssp ------------------------------------
T ss_pred CCCEEEECCCCCHHHHHHHHHc---CCcHhhccHHH
Confidence 57999988887 9999999875 36999996654
No 90
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114}
Probab=45.70 E-value=16 Score=26.17 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=25.9
Q ss_pred eeeecCCCCCCChHHHHHHHHHHHHHHHhcc
Q 046110 46 PVWVIGTGKVAVPAQAQEVHAELRKWLKDNV 76 (130)
Q Consensus 46 PvWAIGtG~~as~~~i~~v~~~IR~~l~~~~ 76 (130)
|+|.-+.....++++.+++.+.||+.|.+..
T Consensus 107 ~vw~~~~~~~~~~eel~~~a~kIr~~L~~~~ 137 (149)
T 3i24_A 107 PVWGNTTGVIRAQSSQTQLVDLLRDKLSNIS 137 (149)
T ss_dssp CSTTCSCCCBCCHHHHHHHHHHHHHHHTTST
T ss_pred ceecCCCCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 7886666778899999999999999987653
No 91
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=45.35 E-value=9.7 Score=32.30 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=35.1
Q ss_pred CCCCChHHHHHHHHHHHHHHHhccChhhcCcCc-EEEcCCCCcccHHHHH
Q 046110 53 GKVAVPAQAQEVHAELRKWLKDNVNAEVAASTR-IIYRDTVINSTLQLNI 101 (130)
Q Consensus 53 G~~as~~~i~~v~~~IR~~l~~~~~~~~a~~ir-ILYGGSV~~~N~~~l~ 101 (130)
|...++-+-......+|+.+.+.+|- ...++ |+++++.+.+-+.+|.
T Consensus 304 GVR~DSGDp~~~~~~~r~~l~d~~G~--~~~~k~Ii~SdgLd~~~i~~l~ 351 (441)
T 1vlp_A 304 GVRQDSGDPVEYTKKISHHYHDVLKL--PKFSKIICYSDSLNVEKAITYS 351 (441)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTTSCC--CTTSSEEEECSSCCHHHHHHHH
T ss_pred EEEcCCCCHHHHHHHHHHHHHHHcCC--CCCceEEEEeCCCCHHHHHHHH
Confidence 55555556666778888888666652 22367 9999999999999998
No 92
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=45.14 E-value=20 Score=29.90 Aligned_cols=41 Identities=12% Similarity=0.060 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcc
Q 046110 59 AQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQY 103 (130)
Q Consensus 59 ~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~ 103 (130)
.+..+..+.+|+.+.+. | ..+++|...|.++.+|+.+|...
T Consensus 250 gd~~~~v~~v~~~ld~~-G---~~~~~I~aSggl~~~~i~~l~~~ 290 (398)
T 2i1o_A 250 GNFEALIREVRWELALR-G---RSDIKIMVSGGLDENTVKKLREA 290 (398)
T ss_dssp SCHHHHHHHHHHHHHHT-T---CTTSEEEEESSCCHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHhC-C---CCceEEEEeCCCCHHHHHHHHHc
Confidence 77777888888877653 1 12479999999999999999975
No 93
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=45.06 E-value=12 Score=31.04 Aligned_cols=42 Identities=7% Similarity=-0.161 Sum_probs=31.8
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeecccccccccc
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSC 127 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~ 127 (130)
+++++-.|.++++.+++++... ..|++.+|.+.+ .||+-+..
T Consensus 319 ~iPvi~~G~i~~~~a~~~l~~g--~aD~V~igR~~l-~dP~l~~k 360 (402)
T 2hsa_B 319 QGTFICSGGYTRELGIEAVAQG--DADLVSYGRLFI-SNPDLVMR 360 (402)
T ss_dssp SSCEEEESSCCHHHHHHHHHTT--SCSEEEESHHHH-HCTTHHHH
T ss_pred CCCEEEeCCCCHHHHHHHHHCC--CCceeeecHHHH-hCchHHHH
Confidence 4689998888999999999753 358899988766 35655443
No 94
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=43.71 E-value=26 Score=25.48 Aligned_cols=31 Identities=6% Similarity=0.097 Sum_probs=25.6
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++--|.+ +++|+.+++.. ..||+++|.+
T Consensus 175 ~ipvia~GGI~~~~~~~~~~~~---Gad~v~vG~a 206 (223)
T 1y0e_A 175 DAKVIAEGNVITPDMYKRVMDL---GVHCSVVGGA 206 (223)
T ss_dssp CSEEEEESSCCSHHHHHHHHHT---TCSEEEECHH
T ss_pred CCCEEEecCCCCHHHHHHHHHc---CCCEEEEChH
Confidence 4789998888 99999999874 3589999755
No 95
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=43.71 E-value=50 Score=26.22 Aligned_cols=48 Identities=10% Similarity=-0.152 Sum_probs=35.5
Q ss_pred CChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEee
Q 046110 56 AVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLA 115 (130)
Q Consensus 56 as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~ 115 (130)
.+|+++.++.+.+++. ..++++.=-|-+|++|++++... .+|++-+|.
T Consensus 223 ~~~~~~~~~v~~l~~~---------~~~v~ieaSGGIt~~~i~~~a~t---GVD~isvG~ 270 (284)
T 1qpo_A 223 FAVWQTQTAVQRRDSR---------APTVMLESSGGLSLQTAATYAET---GVDYLAVGA 270 (284)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTCEEEEESSCCTTTHHHHHHT---TCSEEECGG
T ss_pred CCHHHHHHHHHHhhcc---------CCCeEEEEECCCCHHHHHHHHhc---CCCEEEECH
Confidence 5888888888877642 12467888999999999999864 467666543
No 96
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=43.53 E-value=16 Score=28.36 Aligned_cols=31 Identities=6% Similarity=-0.012 Sum_probs=22.6
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
.+|+.|||-+ +++.+++++. . .|++.+|.+-
T Consensus 180 ~~Pv~vGGGI~t~e~a~~~~~--g--AD~VVVGSa~ 211 (228)
T 3vzx_A 180 TSTLFYGGGIKDAETAKQYAE--H--ADVIVVGNAV 211 (228)
T ss_dssp SSEEEEESSCCSHHHHHHHHT--T--CSEEEECTHH
T ss_pred CCCEEEeCCCCCHHHHHHHHh--C--CCEEEEChHH
Confidence 4799998888 4677888762 3 4899995543
No 97
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=43.29 E-value=27 Score=28.03 Aligned_cols=59 Identities=15% Similarity=0.043 Sum_probs=35.5
Q ss_pred eeeee-cCCCCCCChHHHHHHHHHHHHHHHhccChhhcCc-CcEEE-cCCCCcccHHHHHcccCCCcceEEEeeeec
Q 046110 45 EPVWV-IGTGKVAVPAQAQEVHAELRKWLKDNVNAEVAAS-TRIIY-RDTVINSTLQLNIQYYYPNLFIELTLAFSI 118 (130)
Q Consensus 45 EPvWA-IGtG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~-irILY-GGSV~~~N~~~l~~~~~~dvdG~Lig~~s~ 118 (130)
+|.=+ ||||...+..+. ++.|++. . .+ +|++- ||=-+|+.+...|.. -.||+|+|.|=.
T Consensus 150 mPlg~pIGsG~Gi~~~~~---L~~i~~~---~------~~~vPVI~~GGI~tpsDAa~AmeL---GAdgVlVgSAI~ 211 (268)
T 2htm_A 150 MPLAAPIGSGWGVRTRAL---LELFARE---K------ASLPPVVVDAGLGLPSHAAEVMEL---GLDAVLVNTAIA 211 (268)
T ss_dssp EEBSSSTTTCCCSTTHHH---HHHHHHT---T------TTSSCBEEESCCCSHHHHHHHHHT---TCCEEEESHHHH
T ss_pred EecCccCcCCcccCCHHH---HHHHHHh---c------CCCCeEEEeCCCCCHHHHHHHHHc---CCCEEEEChHHh
Confidence 77444 999986643222 3333321 1 13 66776 555567888888874 449999965433
No 98
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=43.17 E-value=22 Score=27.57 Aligned_cols=30 Identities=10% Similarity=0.153 Sum_probs=22.6
Q ss_pred cCcEEEcCCCCc-ccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVIN-STLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~-~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.+|+++||-++. +.++++++ .. ||+.||-+
T Consensus 190 ~~Pv~vGgGI~s~e~a~~~~~--gA--d~VIVGSa 220 (234)
T 2f6u_A 190 KARLFYGGGIDSREKAREMLR--YA--DTIIVGNV 220 (234)
T ss_dssp SSEEEEESCCCSHHHHHHHHH--HS--SEEEECHH
T ss_pred CCCEEEEecCCCHHHHHHHHh--CC--CEEEEChH
Confidence 479999988874 78888765 34 89999544
No 99
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum}
Probab=42.20 E-value=22 Score=25.55 Aligned_cols=30 Identities=20% Similarity=0.259 Sum_probs=24.2
Q ss_pred eeeeecCCCCCCChHHHHHHHHHHHHHHHh
Q 046110 45 EPVWVIGTGKVAVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 45 EPvWAIGtG~~as~~~i~~v~~~IR~~l~~ 74 (130)
.|+|.-+.....++++.+++.+.||+.+..
T Consensus 111 ~pvw~~~~~~~~~~eel~~~a~~Ir~~L~~ 140 (149)
T 3i4s_A 111 RPVWGVMQPLAHDATEVQNFISALRRKIWL 140 (149)
T ss_dssp SCCTTTSCCCCCCHHHHHHHHHHHHHHHCC
T ss_pred ccccCCCcCCCCCHHHHHHHHHHHHHHHhc
Confidence 577866666778999999999999988753
No 100
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=40.88 E-value=14 Score=30.28 Aligned_cols=41 Identities=15% Similarity=-0.188 Sum_probs=31.5
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeeccccccccc
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFS 126 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~ 126 (130)
+++|+-+|.++++.+.+++... ..|.+.+|.+.+ .||+-+.
T Consensus 307 ~iPvi~~G~it~~~a~~~l~~g--~aD~V~igR~~l-~~P~l~~ 347 (379)
T 3aty_A 307 SGVKISNLRYDFEEADQQIREG--KVDAVAFGAKFI-ANPDLVE 347 (379)
T ss_dssp CSCEEEESSCCHHHHHHHHHTT--SCSEEEESHHHH-HCTTHHH
T ss_pred CCcEEEECCCCHHHHHHHHHcC--CCeEEEecHHHH-hCcHHHH
Confidence 4789999999999999999753 358899987766 3565443
No 101
>2phc_B Uncharacterized protein PH0987; structural genomics, southeas collaboratory for structural genomics, secsg, PSI, protein initiative; 2.29A {Pyrococcus horikoshii} SCOP: b.62.1.4 d.74.5.1
Probab=40.49 E-value=37 Score=26.19 Aligned_cols=63 Identities=11% Similarity=0.162 Sum_probs=36.4
Q ss_pred CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhc--cChhhcCcCcEEEcCCCCcccHHHHHcccCCCcc
Q 046110 36 NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDN--VNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLF 109 (130)
Q Consensus 36 ~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~--~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvd 109 (130)
....+.|-|.|.= .+.+.+.+ .|++...+. -....--.+|+.|||+..+ |.+++....+.+.|
T Consensus 48 ~~~sl~V~~dp~~-------~~~~~l~~---~l~~~~~~~~~~~~~r~v~IPV~Y~~~~gp-DL~~vA~~~gLs~~ 112 (225)
T 2phc_B 48 AYSSLLVIYDPLK-------ASYEEVES---YLKRISAREVERIKGKTIEIPVAYGGEFGP-DIEFVAQYNGLSVD 112 (225)
T ss_dssp ETTEEEEEECTTT-------SCHHHHHH---HHHHHHHHHHHHHHTTEEEEEEEESTTTCT-THHHHHHHHTCCHH
T ss_pred cceEEEEEEcCCc-------CCHHHHHH---HHHHHHhhcccCCCCcEEEEEeEeCCCCCC-CHHHHHHHhCcCHH
Confidence 3667888998832 13333333 333332221 0011234689999999988 88888776555443
No 102
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=39.33 E-value=42 Score=23.98 Aligned_cols=31 Identities=6% Similarity=-0.159 Sum_probs=24.2
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++++.-.|.++++|++++++. + .|++-+|.+
T Consensus 158 ~~pi~v~GGI~~~~~~~~~~a-G--ad~vvvGsa 188 (207)
T 3ajx_A 158 RVPFSVAGGVKVATIPAVQKA-G--AEVAVAGGA 188 (207)
T ss_dssp TSCEEEESSCCGGGHHHHHHT-T--CSEEEESHH
T ss_pred CCCEEEECCcCHHHHHHHHHc-C--CCEEEEeee
Confidence 367888999999999999863 3 477877544
No 103
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=39.24 E-value=20 Score=28.99 Aligned_cols=40 Identities=5% Similarity=-0.176 Sum_probs=29.1
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeecccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVF 125 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F 125 (130)
+++|+-+|.+ +++++++++... ..|.+.+|.+.++ ||+-+
T Consensus 295 ~iPVi~~GgI~s~e~a~~~l~~G--~aD~V~iGR~~la-nPdl~ 335 (363)
T 3l5l_A 295 KLPVTSAWGFGTPQLAEAALQAN--QLDLVSVGRAHLA-DPHWA 335 (363)
T ss_dssp TCCEEECSSTTSHHHHHHHHHTT--SCSEEECCHHHHH-CTTHH
T ss_pred CCcEEEeCCCCCHHHHHHHHHCC--CccEEEecHHHHh-CchHH
Confidence 4789999998 699999998752 3588888776653 45433
No 104
>2f7f_A Nicotinate phosphoribosyltransferase, putative; structural genomics, PSI; 2.00A {Enterococcus faecalis} SCOP: c.1.17.1 d.41.2.1
Probab=39.04 E-value=24 Score=30.30 Aligned_cols=48 Identities=8% Similarity=-0.024 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 62 QEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 62 ~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.+..+..|+.+... |. .+++|+++|+++.+|+.+|... +.++| -+|.|
T Consensus 269 ~~l~~~~r~~ld~~-G~---~~~kI~aSggld~~~i~~l~~~-G~~~~--sfGvG 316 (494)
T 2f7f_A 269 AYISKRVREQLDEA-GF---TEAKIYASNDLDENTILNLKMQ-KSKID--VWGVG 316 (494)
T ss_dssp HHHHHHHHHHHHHT-TC---TTCEEEECSSCCHHHHHHHHHT-TCCCC--EEEEC
T ss_pred HHHHHHHHHHHHhC-CC---CceEEEEECCCCHHHHHHHHHc-CCCEE--EEecC
Confidence 33445555555332 21 2578999999999999999874 45455 33544
No 105
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=38.88 E-value=37 Score=27.05 Aligned_cols=48 Identities=4% Similarity=0.068 Sum_probs=35.3
Q ss_pred CChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEee
Q 046110 56 AVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLA 115 (130)
Q Consensus 56 as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~ 115 (130)
.+++++.++.+.++.. ..++++.=-|-+|++|++++... .+|++=+|.
T Consensus 222 ~~~e~l~~av~~l~~~---------~~~v~ieASGGIt~eni~~~a~t---GVD~IsvGs 269 (285)
T 1o4u_A 222 LSPEEVKDISRRIKDI---------NPNVIVEVSGGITEENVSLYDFE---TVDVISSSR 269 (285)
T ss_dssp CCHHHHHHHHHHHHHH---------CTTSEEEEEECCCTTTGGGGCCT---TCCEEEEGG
T ss_pred CCHHHHHHHHHHhhcc---------CCCceEEEECCCCHHHHHHHHHc---CCCEEEEeH
Confidence 5788888887777632 12467888999999999999753 568766644
No 106
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=38.88 E-value=19 Score=26.53 Aligned_cols=32 Identities=3% Similarity=-0.155 Sum_probs=26.1
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
+++++-.|.++ ++|+.+++.. ..||+.+|.+-
T Consensus 186 ~ipvia~GGI~s~~~~~~~~~~---Gad~v~vGsal 218 (234)
T 1yxy_A 186 GIAVIAEGKIHSPEEAKKINDL---GVAGIVVGGAI 218 (234)
T ss_dssp TCCEEEESCCCSHHHHHHHHTT---CCSEEEECHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHC---CCCEEEEchHH
Confidence 47899999998 9999999874 35899996653
No 107
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=38.28 E-value=21 Score=29.27 Aligned_cols=41 Identities=7% Similarity=-0.155 Sum_probs=29.7
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeeccccccccc
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFS 126 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~ 126 (130)
+++++-.|.++++.+++++... ..|.+.+|++.+ .||+-+.
T Consensus 279 ~iPvi~~Ggit~e~a~~~l~~g--~aD~V~iGR~~l-anPdl~~ 319 (362)
T 4ab4_A 279 GGPYIVNERFDKASANAALASG--KADAVAFGVPFI-ANPDLPA 319 (362)
T ss_dssp CSCEEEESSCCHHHHHHHHHTT--SCSEEEESHHHH-HCTTHHH
T ss_pred CCCEEEeCCCCHHHHHHHHHcC--CccEEEECHHhH-hCcHHHH
Confidence 3678887778999999999753 358888877765 3554443
No 108
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=38.05 E-value=21 Score=29.22 Aligned_cols=40 Identities=10% Similarity=-0.102 Sum_probs=29.2
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeecccccccc
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQGDVF 125 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F 125 (130)
+++++-.|.++++.+++++... ..|++.+|++.+ .||+-+
T Consensus 287 ~iPvi~~Ggit~e~a~~~l~~G--~aD~V~iGR~~l-adPdl~ 326 (361)
T 3gka_A 287 GGPFIVNENFTLDSAQAALDAG--QADAVAWGKLFI-ANPDLP 326 (361)
T ss_dssp CSCEEEESSCCHHHHHHHHHTT--SCSEEEESHHHH-HCTTHH
T ss_pred CCCEEEeCCCCHHHHHHHHHcC--CccEEEECHHhH-hCcHHH
Confidence 3578887778999999999753 358888877765 345433
No 109
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=37.53 E-value=21 Score=28.73 Aligned_cols=42 Identities=2% Similarity=-0.341 Sum_probs=30.4
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeecccccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSC 127 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~ 127 (130)
+++|+-+|.+ +++.+++++... ..|.+.+|.+.+ .||+-+..
T Consensus 277 ~iPVi~~GgI~s~e~a~~~L~~G--~aD~V~iGR~~l-anPdl~~k 319 (340)
T 3gr7_A 277 DIPTGAVGLITSGWQAEEILQNG--RADLVFLGRELL-RNPYWPYA 319 (340)
T ss_dssp TCCEEEESSCCCHHHHHHHHHTT--SCSEEEECHHHH-HCTTHHHH
T ss_pred CCcEEeeCCCCCHHHHHHHHHCC--CeeEEEecHHHH-hCchHHHH
Confidence 4789998887 689999998752 358889987765 35654443
No 110
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=37.03 E-value=28 Score=26.90 Aligned_cols=30 Identities=0% Similarity=-0.058 Sum_probs=22.4
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.+++.|||.++..++++++ ... |-+.+|.+
T Consensus 76 ~~pv~vgGGir~~~~~~~l--~Ga--~~Viigs~ 105 (260)
T 2agk_A 76 PQFLQVGGGINDTNCLEWL--KWA--SKVIVTSW 105 (260)
T ss_dssp TTTSEEESSCCTTTHHHHT--TTC--SCEEECGG
T ss_pred CceEEEeCCCCHHHHHHHh--cCC--CEEEECcH
Confidence 4789999999988999998 344 55666333
No 111
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=36.94 E-value=28 Score=27.91 Aligned_cols=39 Identities=8% Similarity=-0.168 Sum_probs=28.8
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeeccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDV 124 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~ 124 (130)
+++|+-+|++ +++++++++... ..|.+.+|.+.+ .||+-
T Consensus 288 ~iPVi~~Ggi~t~e~a~~~l~~G--~aD~V~iGR~~l-anPdl 327 (349)
T 3hgj_A 288 GLRTGAVGLITTPEQAETLLQAG--SADLVLLGRVLL-RDPYF 327 (349)
T ss_dssp CCEEEECSSCCCHHHHHHHHHTT--SCSEEEESTHHH-HCTTH
T ss_pred CceEEEECCCCCHHHHHHHHHCC--CceEEEecHHHH-hCchH
Confidence 4789998887 699999998752 358888877755 25543
No 112
>1nrp_R Receptor based peptide NR'S; serine proteinase/receptor; 3.00A {Homo sapiens} PDB: 1nrn_R 1nrq_R*
Probab=36.32 E-value=7.3 Score=20.55 Aligned_cols=6 Identities=67% Similarity=1.824 Sum_probs=5.2
Q ss_pred Eeeeee
Q 046110 43 AYEPVW 48 (130)
Q Consensus 43 AYEPvW 48 (130)
-|||-|
T Consensus 14 kyepfw 19 (26)
T 1nrp_R 14 KYEPFW 19 (26)
T ss_pred ccCccc
Confidence 499999
No 113
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=35.96 E-value=40 Score=26.33 Aligned_cols=49 Identities=4% Similarity=-0.109 Sum_probs=33.6
Q ss_pred CChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeec
Q 046110 56 AVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSI 118 (130)
Q Consensus 56 as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~ 118 (130)
.+++++.++.+.++.. + .+++|.=-|.++++|+.+++.. .+|++=+ +|+
T Consensus 211 ~~~~~l~~~v~~l~~~----~-----~~~~i~AsGGI~~~ni~~~~~a---GaD~i~v--Gs~ 259 (273)
T 2b7n_A 211 LSVLETKEIAAYRDAH----Y-----PFVLLEASGNISLESINAYAKS---GVDAISV--GAL 259 (273)
T ss_dssp CCHHHHHHHHHHHHHH----C-----TTCEEEEESSCCTTTHHHHHTT---TCSEEEC--THH
T ss_pred CCHHHHHHHHHHhhcc----C-----CCcEEEEECCCCHHHHHHHHHc---CCcEEEE--cHH
Confidence 5688887777766531 1 2467888888999999999864 3464444 553
No 114
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=35.68 E-value=29 Score=28.11 Aligned_cols=40 Identities=0% Similarity=-0.264 Sum_probs=29.1
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeecccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVF 125 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F 125 (130)
+++++-.|.+ +++.+++++... ..|.+.+|.+.+ .||+-+
T Consensus 277 ~iPVi~~Ggi~t~e~Ae~~l~~G--~aD~V~iGR~~l-anPdl~ 317 (343)
T 3kru_A 277 NIKTSAVGLITTQELAEEILSNE--RADLVALGRELL-RNPYWV 317 (343)
T ss_dssp TCEEEEESSCCCHHHHHHHHHTT--SCSEEEESHHHH-HCTTHH
T ss_pred CcccceeeeeeHHHHHHHHHhch--hhHHHHHHHHHh-cCCeEE
Confidence 3789988887 589999998753 358888877765 355444
No 115
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=35.55 E-value=28 Score=25.39 Aligned_cols=31 Identities=13% Similarity=-0.202 Sum_probs=24.0
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++=-|.+|++|+.+++.. . .||+.+|.+
T Consensus 164 ~~pvia~GGI~~~nv~~~~~~-G--a~gv~vgs~ 194 (221)
T 1yad_A 164 SIPVIAIGGMTPDRLRDVKQA-G--ADGIAVMSG 194 (221)
T ss_dssp CSCEEEESSCCGGGHHHHHHT-T--CSEEEESHH
T ss_pred CCCEEEECCCCHHHHHHHHHc-C--CCEEEEhHH
Confidence 467887777799999999973 3 488888554
No 116
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=34.98 E-value=22 Score=27.88 Aligned_cols=31 Identities=16% Similarity=-0.171 Sum_probs=25.4
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.++++-+|-++ ++|+.++... ..||++||.+
T Consensus 213 ~~pvVaegGI~t~edv~~l~~~---GadgvlVGsa 244 (272)
T 3qja_A 213 SVIRIAESGVRGTADLLAYAGA---GADAVLVGEG 244 (272)
T ss_dssp TSEEEEESCCCSHHHHHHHHHT---TCSEEEECHH
T ss_pred cCEEEEECCCCCHHHHHHHHHc---CCCEEEEcHH
Confidence 57888888888 9999999864 4699999655
No 117
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=34.82 E-value=15 Score=24.36 Aligned_cols=32 Identities=25% Similarity=0.210 Sum_probs=23.1
Q ss_pred hhhHHHHHHHHHHHhccccCC--CceEEEeeeee
Q 046110 17 WRGLIDLGSVVETLCGKISNW--DNVVLAYEPVW 48 (130)
Q Consensus 17 ~~~~~~l~~Ql~~~l~~i~~~--~~vvIAYEPvW 48 (130)
-...+.|..+++..+..+... -++.+.++|.|
T Consensus 55 cp~~~~l~~~i~~al~~l~gv~~v~V~l~~~p~W 88 (103)
T 1uwd_A 55 CPLAGMILSDAEEAIKKIEGVNNVEVELTFDPPW 88 (103)
T ss_dssp CSSHHHHHHHHHHHHHTSSSCCEEEEEECCSSCC
T ss_pred CcHHHHHHHHHHHHHHhCCCcceEEEEEecCCCC
Confidence 345778888888887665422 35778899999
No 118
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=34.57 E-value=20 Score=29.26 Aligned_cols=42 Identities=7% Similarity=-0.201 Sum_probs=31.6
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeecccccccccc
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSC 127 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~ 127 (130)
+++++-+|.++++.+.+++... ..|++.+|.+.+ .||+-|..
T Consensus 301 ~iPvi~~G~i~~~~a~~~l~~g--~aD~V~~gR~~l-~~P~l~~k 342 (376)
T 1icp_A 301 KGTFIVAGGYDREDGNRALIED--RADLVAYGRLFI-SNPDLPKR 342 (376)
T ss_dssp CSCEEEESSCCHHHHHHHHHTT--SCSEEEESHHHH-HCTTHHHH
T ss_pred CCCEEEeCCCCHHHHHHHHHCC--CCcEEeecHHHH-hCccHHHH
Confidence 4789998999999999999753 358899987765 35554443
No 119
>1nro_R Receptor based peptide NRP; serine proteinase/receptor; 3.10A {Homo sapiens}
Probab=34.19 E-value=8.4 Score=20.48 Aligned_cols=6 Identities=67% Similarity=1.824 Sum_probs=5.3
Q ss_pred Eeeeee
Q 046110 43 AYEPVW 48 (130)
Q Consensus 43 AYEPvW 48 (130)
-|||-|
T Consensus 14 kyepfw 19 (27)
T 1nro_R 14 KYEPFW 19 (27)
T ss_pred ccCccc
Confidence 499999
No 120
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=33.93 E-value=1.1e+02 Score=24.41 Aligned_cols=58 Identities=10% Similarity=0.168 Sum_probs=30.3
Q ss_pred CccccccceeEEEEeh-----hhhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHH
Q 046110 1 PLFEFREDVILLILVK-----WRGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKW 71 (130)
Q Consensus 1 ~~~~~~~~~~~~~~~~-----~~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~ 71 (130)
|++.+++| .+.|++ +++.+.+.++++..... ....++.|.| .-.++.+++..+.|++.
T Consensus 222 PIl~~~dG--~l~~~~KvRg~kka~~~l~~~~~~~~~~-~~~~~v~I~h----------~~~~e~a~~l~~~l~~~ 284 (315)
T 3fys_A 222 PILHFDNK--VIVPFEKIRTRKKAISRIYELLDEDASK-GLPMRAAVIH----------ANREEEAAKIIEELSAK 284 (315)
T ss_dssp EEEEEETT--EEEEEEECSCHHHHHHHHHHHHHHHHTT-CCCEEEEEEE----------SSCHHHHHHHHHHHHHH
T ss_pred EEEEEECC--EEEEEeeeccHHHHHHHHHHHHHHHhhc-CCCcEEEEEe----------cCCHHHHHHHHHHHHHh
Confidence 78899888 555554 33444444444433321 1112444444 23567777666666543
No 121
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=33.62 E-value=16 Score=27.97 Aligned_cols=42 Identities=12% Similarity=-0.200 Sum_probs=31.4
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeeccccccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCI 128 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I 128 (130)
+++|+-.|.| +++++.+++.. . .|++.+|.+-+. +++.|.+|
T Consensus 241 ~ipvia~GGI~~~~d~~~~l~~-G--Ad~V~vg~~~l~-~p~~~~~i 283 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDVLEMYMA-G--ASAVAVGTANFA-DPFVCPKI 283 (311)
T ss_dssp SSCEEECSSCCSHHHHHHHHHH-T--CSEEEECTHHHH-CTTHHHHH
T ss_pred CCCEEEECCcCCHHHHHHHHHc-C--CCEEEECHHHHc-CcHHHHHH
Confidence 5899998888 79999999863 4 488999777654 55555443
No 122
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=33.56 E-value=23 Score=26.92 Aligned_cols=32 Identities=13% Similarity=0.065 Sum_probs=25.5
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
++|++-.|-+ +++|+.+++.. -.||++||.+-
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~---GadgV~VGsal 213 (232)
T 3igs_A 181 GCRVIAEGRYNSPALAAEAIRY---GAWAVTVGSAI 213 (232)
T ss_dssp TCCEEEESCCCSHHHHHHHHHT---TCSEEEECHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHc---CCCEEEEehHh
Confidence 4789987777 69999999874 45999997553
No 123
>1ybe_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.50A {Agrobacterium tumefaciens} SCOP: c.1.17.2 d.41.2.2
Probab=33.14 E-value=27 Score=29.62 Aligned_cols=49 Identities=14% Similarity=0.241 Sum_probs=36.1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHc
Q 046110 52 TGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQ 102 (130)
Q Consensus 52 tG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~ 102 (130)
.|..+++-+-.+....+|+.+.+ .|-. ..+++|+++++.+.+-+.+|..
T Consensus 309 ~GVR~DSGDp~~~~~~~r~~ld~-~G~~-p~~~~Ii~SdgLd~~~i~~l~~ 357 (449)
T 1ybe_A 309 TGFRPDSAPPIEGGEKIIEWWRK-MGRD-PRTKMLIFSDGLDVDAIVDTYR 357 (449)
T ss_dssp SEECCCSSCHHHHHHHHHHHHHH-TTCC-GGGSEEEECTTCCHHHHHHHHH
T ss_pred ceEecCCCCHHHHHHHHHHHHHH-cCCC-cCceEEEEeCCCCHHHHHHHHH
Confidence 35566666666777788887765 4421 1267999999999999999986
No 124
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=33.02 E-value=40 Score=25.83 Aligned_cols=23 Identities=13% Similarity=0.141 Sum_probs=18.2
Q ss_pred CcEEEcCCCCcccHHHHHcccCC
Q 046110 84 TRIIYRDTVINSTLQLNIQYYYP 106 (130)
Q Consensus 84 irILYGGSV~~~N~~~l~~~~~~ 106 (130)
.|++-.|-.||+|+.+.++...+
T Consensus 174 ~p~iLAGGL~peNV~~Ai~~~~P 196 (228)
T 4aaj_A 174 IPVIVAGGLNAENVEEVIKVVKP 196 (228)
T ss_dssp SCEEEESSCCTTTHHHHHHHHCC
T ss_pred CCeEEECCCCHHHHHHHHHHhCC
Confidence 47777889999999998875344
No 125
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=31.87 E-value=32 Score=28.03 Aligned_cols=34 Identities=6% Similarity=-0.121 Sum_probs=25.9
Q ss_pred cCcEEE---cCCCCcccHHHHHcccCCCcceEEEeeeecc
Q 046110 83 STRIIY---RDTVINSTLQLNIQYYYPNLFIELTLAFSIR 119 (130)
Q Consensus 83 ~irILY---GGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~ 119 (130)
++|++- ||=-+|+++.+.+. ...||++||.+-.+
T Consensus 198 ~IPVV~IAnGGI~TpedA~~~le---~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 198 KLPVVNFAAGGVATPADAALLMQ---LGCDGVFVGSGIFK 234 (291)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHHH---TTCSCEEECGGGGG
T ss_pred CCCEEEecCCCCCCHHHHHHHHH---hCCCEEEEchHHhC
Confidence 467753 77779999999994 34599999877653
No 126
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0
Probab=30.41 E-value=46 Score=23.43 Aligned_cols=28 Identities=7% Similarity=0.037 Sum_probs=21.6
Q ss_pred eeeeeecCCCCCCChHHHHHHHHHHHHHHHh
Q 046110 44 YEPVWVIGTGKVAVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 44 YEPvWAIGtG~~as~~~i~~v~~~IR~~l~~ 74 (130)
++|.|. ....++++.+++.+.||+.+.+
T Consensus 121 ~~~~w~---~~~~~~~~l~~~~~~lr~~l~~ 148 (149)
T 3ksv_A 121 LKIGWD---TVKVASDELAEDAKRYSEAIAK 148 (149)
T ss_dssp CCCCCC---CCCCCHHHHHHHHHHHHHHHHT
T ss_pred cccCCC---CCCCCHHHHHHHHHHHHHHHhh
Confidence 566673 4467899999999999988753
No 127
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=29.80 E-value=77 Score=23.68 Aligned_cols=50 Identities=16% Similarity=0.103 Sum_probs=33.0
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 52 TGKVAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 52 tG~~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
.|..++++++..+ |+.... +.+|.--|.++++|++++.. ...|.+.+|.+
T Consensus 149 ~Gvv~s~~e~~~i----r~~~~~--------~~~i~v~gGI~~~~~~~~~~---aGad~~VvG~~ 198 (221)
T 3exr_A 149 AGETWGEKDLNKV----KKLIEM--------GFRVSVTGGLSVDTLKLFEG---VDVFTFIAGRG 198 (221)
T ss_dssp HTCCCCHHHHHHH----HHHHHH--------TCEEEEESSCCGGGGGGGTT---CCCSEEEECHH
T ss_pred CccccCHHHHHHH----HHhhcC--------CceEEEECCCCHHHHHHHHH---CCCCEEEECch
Confidence 4677888776644 443321 35677788899999987654 34577788654
No 128
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=29.64 E-value=83 Score=22.06 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhccccCCCceEEEeeeeeecCCCCC-CChHHHHHHHHHHHHHHH
Q 046110 21 IDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKV-AVPAQAQEVHAELRKWLK 73 (130)
Q Consensus 21 ~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~-as~~~i~~v~~~IR~~l~ 73 (130)
+.|.+-+++++....+.+--.||+ | +||||.- -+.+++.+ .|++.+.
T Consensus 91 ~~l~~~l~~~l~~a~~~~~~sIa~-P--~IgtG~~G~~~~~v~~---ii~~~~~ 138 (149)
T 2eee_A 91 ENLQKSLEAMKSHCLKNGVTDLSM-P--RIGCGLDRLQWENVSA---MIEEVFE 138 (149)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEC-C--CCCCTTTTCCHHHHHH---HHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEe-C--CCCCCCCCCCHHHHHH---HHHHHhc
Confidence 345555555554332111125666 5 6777764 44444433 3444443
No 129
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1
Probab=29.46 E-value=39 Score=23.52 Aligned_cols=28 Identities=11% Similarity=0.222 Sum_probs=19.9
Q ss_pred eeeeeecCCCCCCChHHHHHHHHHHHHHH
Q 046110 44 YEPVWVIGTGKVAVPAQAQEVHAELRKWL 72 (130)
Q Consensus 44 YEPvWAIGtG~~as~~~i~~v~~~IR~~l 72 (130)
+||+|.-. ....++++.+++.+.||+.|
T Consensus 119 ~~~~~~~~-~~~~~~~~~~~~~~~ir~~l 146 (147)
T 3imi_A 119 FGAVWKSH-QNEYTMENLQNIASTIANSV 146 (147)
T ss_dssp EEEEECCC-GGGCCHHHHHHHHHHHHHHC
T ss_pred ceeecccc-CCCCCHHHHHHHHHHHHHhh
Confidence 46778422 23567899999999999754
No 130
>2bf9_A Pancreatic hormone; turkey, pancreas, polypeptide, atomic resolution, anisotropic refinement; HET: TYC; 0.99A {Meleagris gallopavo} SCOP: j.6.1.1 PDB: 1ppt_A 2k76_A 2h3s_B* 2h3t_B* 2h4b_C*
Probab=28.79 E-value=64 Score=18.42 Aligned_cols=23 Identities=17% Similarity=0.213 Sum_probs=19.9
Q ss_pred CCCCCChHHHHHHHHHHHHHHHh
Q 046110 52 TGKVAVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 52 tG~~as~~~i~~v~~~IR~~l~~ 74 (130)
-|.-|++|+..+-+..+|.++.-
T Consensus 8 PG~dA~~Eela~Y~~~LrhYiNl 30 (36)
T 2bf9_A 8 PGDDAPVEDLIRFYNDLQQYLNV 30 (36)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Confidence 47789999999999999998753
No 131
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi}
Probab=28.70 E-value=50 Score=22.62 Aligned_cols=27 Identities=19% Similarity=0.182 Sum_probs=20.3
Q ss_pred eeeeeecCCCCCCChHHHHHHHHHHHHHHH
Q 046110 44 YEPVWVIGTGKVAVPAQAQEVHAELRKWLK 73 (130)
Q Consensus 44 YEPvWAIGtG~~as~~~i~~v~~~IR~~l~ 73 (130)
+++.|. ....++++.+++.+.||+.|.
T Consensus 108 ~~~~~~---~~~~~~~~l~~~~~~ir~~l~ 134 (135)
T 3r6f_A 108 LMINWK---AKSVSDKEYSEMVEEARLRVS 134 (135)
T ss_dssp CCCCCC---CCCCCHHHHHHHHHHHHHHHH
T ss_pred ceecCC---CCCCCHHHHHHHHHHHHHHhc
Confidence 455663 345688999999999998775
No 132
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=28.65 E-value=91 Score=22.95 Aligned_cols=53 Identities=13% Similarity=0.164 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCC--CChHHHHHHHHHHHHHHHhc
Q 046110 20 LIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKV--AVPAQAQEVHAELRKWLKDN 75 (130)
Q Consensus 20 ~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~--as~~~i~~v~~~IR~~l~~~ 75 (130)
.+.|.+-.+++|....+.+--.||+ | +||||.- +..+-++-+.+.+|+++.+.
T Consensus 111 ~~~L~~~y~~~L~~a~~~~~~SIAf-P--~IstG~~g~p~~~aa~i~~~~v~~~l~~~ 165 (193)
T 2xd7_A 111 EEQLEETIKNCLSAAEDKKLKSVAF-P--PFPSGRNCFPKQTAAQVTLKAISAHFDDS 165 (193)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEE-C--CCCCSTTCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEe-c--cccCCCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4456666677776443323335788 6 7998764 54555666778889888653
No 133
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=28.50 E-value=66 Score=26.20 Aligned_cols=48 Identities=4% Similarity=-0.153 Sum_probs=34.1
Q ss_pred CChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEEeeeeccc
Q 046110 56 AVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELTLAFSIRY 120 (130)
Q Consensus 56 as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~ 120 (130)
.+++++.++.+.++ .+++|.=-|.++++|++++... .+|++=+ |++-+
T Consensus 260 ~~~~~l~~av~~l~------------~~v~ieaSGGIt~~~I~~~a~t---GVD~isv--Galt~ 307 (320)
T 3paj_A 260 FSLEMMREAVKINA------------GRAALENSGNITLDNLKECAET---GVDYISV--GALTK 307 (320)
T ss_dssp CCHHHHHHHHHHHT------------TSSEEEEESSCCHHHHHHHHTT---TCSEEEC--THHHH
T ss_pred CCHHHHHHHHHHhC------------CCCeEEEECCCCHHHHHHHHHc---CCCEEEE--Cceec
Confidence 57788777776553 2578888999999999999863 4575544 55433
No 134
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=28.05 E-value=63 Score=27.68 Aligned_cols=33 Identities=6% Similarity=-0.072 Sum_probs=24.8
Q ss_pred cCcEEE-cCCCCcccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIY-RDTVINSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILY-GGSV~~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
++|+++ ||--+++.+.+++.. ...||+++|.+-
T Consensus 496 ~iPVIasGGi~s~~d~~~~~~~--~G~~gvivg~a~ 529 (555)
T 1jvn_A 496 KIPVIASSGAGVPEHFEEAFLK--TRADACLGAGMF 529 (555)
T ss_dssp SSCEEECSCCCSHHHHHHHHHH--SCCSEEEESHHH
T ss_pred CccEEEECCCCCHHHHHHHHHh--cCChHHHHHHHH
Confidence 589999 555588999999864 356899996553
No 135
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=27.95 E-value=45 Score=24.31 Aligned_cols=23 Identities=26% Similarity=0.322 Sum_probs=18.9
Q ss_pred CCCCCChHHHHHHHHHHHHHHHh
Q 046110 52 TGKVAVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 52 tG~~as~~~i~~v~~~IR~~l~~ 74 (130)
.|.+.+.+.+++++..||-+|..
T Consensus 81 e~l~L~~~~v~~~L~~iRP~L~~ 103 (154)
T 2z51_A 81 TGLELNEENIEKVLEEIRPYLIG 103 (154)
T ss_dssp CSCCSSHHHHHHHHHHHGGGCCG
T ss_pred hhhHHHHHHHHHHHHHHHHHhhh
Confidence 36677889999999999988764
No 136
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=27.74 E-value=38 Score=24.23 Aligned_cols=31 Identities=3% Similarity=-0.186 Sum_probs=25.0
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++=-|.++++|+.+++.. + .||+.+|.+
T Consensus 150 ~~pvia~GGI~~~~~~~~~~~-G--a~~v~vGs~ 180 (205)
T 1wa3_A 150 NVKFVPTGGVNLDNVCEWFKA-G--VLAVGVGSA 180 (205)
T ss_dssp TCEEEEBSSCCTTTHHHHHHH-T--CSCEEECHH
T ss_pred CCcEEEcCCCCHHHHHHHHHC-C--CCEEEECcc
Confidence 578999999999999999974 3 477888544
No 137
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=27.55 E-value=26 Score=23.48 Aligned_cols=32 Identities=16% Similarity=0.196 Sum_probs=22.4
Q ss_pred hhhHHHHHHHHHHHh-ccccC--CCceEEEeeeee
Q 046110 17 WRGLIDLGSVVETLC-GKISN--WDNVVLAYEPVW 48 (130)
Q Consensus 17 ~~~~~~l~~Ql~~~l-~~i~~--~~~vvIAYEPvW 48 (130)
-...+.|..+++..+ ..+.. .-++.+.++|-|
T Consensus 57 cp~~~~i~~~i~~al~~~l~Gv~~V~V~l~~~p~W 91 (108)
T 3lno_A 57 CPMAGQIVSDVKKVLSTNVPEVNEIEVNVVWNPPW 91 (108)
T ss_dssp CTTHHHHHHHHHHHHHHHCTTCCCEEEEECCSSCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCceEEEEEEecCCC
Confidence 345667888888777 55542 235788999999
No 138
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti}
Probab=27.40 E-value=38 Score=23.53 Aligned_cols=26 Identities=19% Similarity=0.344 Sum_probs=20.4
Q ss_pred eeeecCCCCCCChHHHHHHHHHHHHH
Q 046110 46 PVWVIGTGKVAVPAQAQEVHAELRKW 71 (130)
Q Consensus 46 PvWAIGtG~~as~~~i~~v~~~IR~~ 71 (130)
|+|.-+.....++++.+++.+.||+.
T Consensus 109 ~~~~~~~~~~~~~~el~~~a~~i~~~ 134 (135)
T 3nrd_A 109 PVWGFGKAEPWPEEEHRTFAARIMEN 134 (135)
T ss_dssp CSTTCSCCCCCCHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHhh
Confidence 66755566678999999999999864
No 139
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=27.26 E-value=24 Score=22.96 Aligned_cols=34 Identities=12% Similarity=-0.050 Sum_probs=25.2
Q ss_pred cCCCCcccHHHHHcccCCCcceEEEeeeeccccccccccccC
Q 046110 89 RDTVINSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCICL 130 (130)
Q Consensus 89 GGSV~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I~~ 130 (130)
|-.++.+-+.++++.-|.|+| |...+ +.|+++++
T Consensus 66 g~~~~~~ei~~l~~~~D~d~d------G~I~~--~EF~~~m~ 99 (100)
T 2lv7_A 66 GYMPNEVELEVIIQRLDMDGD------GQVDF--EEFVTLLG 99 (100)
T ss_dssp TCCCCTTTHHHHHHHHCSSCS------SSBCH--HHHHHHTC
T ss_pred CCCCCHHHHHHHHHHHCCCCC------CeEeH--HHHHHHhC
Confidence 667788999999998677666 55544 68888764
No 140
>3ub6_A Chemoreceptor TLPB; homodimer, four-helix bundle, PAS domain, membrane protein; 1.38A {Helicobacter pylori} PDB: 3ub7_A 3ub8_A 3ub9_A*
Probab=27.07 E-value=24 Score=25.60 Aligned_cols=31 Identities=10% Similarity=0.042 Sum_probs=24.2
Q ss_pred eee-eeecCCCCCCChHHHHHHHHHHHHHHHhcc
Q 046110 44 YEP-VWVIGTGKVAVPAQAQEVHAELRKWLKDNV 76 (130)
Q Consensus 44 YEP-vWAIGtG~~as~~~i~~v~~~IR~~l~~~~ 76 (130)
++| -|.||||. -.++++.....+|+.+.+..
T Consensus 143 ~~~w~W~IgtG~--y~ddi~a~~~~~~~~~~~~~ 174 (181)
T 3ub6_A 143 DEVSQMVIAATS--YYTDINTENKAIKEGVNKVF 174 (181)
T ss_dssp ETTTTEEEEEEE--EHHHHHHHTHHHHHHHHHC-
T ss_pred ECCCCEEEEEee--EHHHHHHHHHHHHHHHHHHH
Confidence 444 59999987 67889999999988887654
No 141
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=26.69 E-value=97 Score=22.58 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCC--CChHHHHHHHHHHHHHHHh
Q 046110 20 LIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKV--AVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 20 ~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~--as~~~i~~v~~~IR~~l~~ 74 (130)
.+.|.+-++++|....+.+--.||+ | +||||.- +..+-++-+.+.+|+++.+
T Consensus 94 ~~~L~~~y~~~L~~a~~~~~~SIAf-P--~IstG~~g~p~~~aa~i~~~~v~~~l~~ 147 (184)
T 1spv_A 94 DQLLQDAYLNSLRLVAANSYTSVAF-P--AISTGVYGYPRAAAAEIAVKTVSEFITR 147 (184)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEE-C--CTTSSTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEe-c--cccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4456666677765443222236788 6 7998875 3334445577888888765
No 142
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=26.19 E-value=50 Score=23.13 Aligned_cols=31 Identities=10% Similarity=-0.151 Sum_probs=22.3
Q ss_pred cCcEEE-cCCCCcccHHHHHcccCCCcceEEEeee
Q 046110 83 STRIIY-RDTVINSTLQLNIQYYYPNLFIELTLAF 116 (130)
Q Consensus 83 ~irILY-GGSV~~~N~~~l~~~~~~dvdG~Lig~~ 116 (130)
++|++. ||.-+++++.+.+.. + .||+++|.+
T Consensus 174 ~~Pvia~~g~~~~~~~~~~~~~-G--~~~~~vg~a 205 (237)
T 3cwo_X 174 TLPIIASGGAGKMEHFLEAFLA-G--ADAALAASV 205 (237)
T ss_dssp CSCEEEESCCCSHHHHHHHHHH-T--CSEEEESHH
T ss_pred CCCEEecCCCCCHHHHHHHHHc-C--cHHHhhhHH
Confidence 568887 455568999998863 3 589999654
No 143
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=25.99 E-value=20 Score=27.71 Aligned_cols=43 Identities=9% Similarity=-0.063 Sum_probs=31.0
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeeccccccccccc
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCI 128 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I 128 (130)
++||+..|-| +++.+.+++.. . .|++.+|.+.+..+|.-|.+|
T Consensus 242 ~ipvi~~GGI~~~~da~~~l~~-G--Ad~V~vg~~~l~~~p~~~~~i 285 (311)
T 1jub_A 242 EIQIIGTGGIETGQDAFEHLLC-G--ATMLQIGTALHKEGPAIFDRI 285 (311)
T ss_dssp TSEEEEESSCCSHHHHHHHHHH-T--CSEEEECHHHHHHCTHHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHc-C--CCEEEEchHHHhcCcHHHHHH
Confidence 6899997777 77899998853 4 488999777654356555443
No 144
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=24.68 E-value=14 Score=24.47 Aligned_cols=30 Identities=23% Similarity=0.395 Sum_probs=20.6
Q ss_pred hHHHHHHHHHHHhccccC--CCceEEEeeeee
Q 046110 19 GLIDLGSVVETLCGKISN--WDNVVLAYEPVW 48 (130)
Q Consensus 19 ~~~~l~~Ql~~~l~~i~~--~~~vvIAYEPvW 48 (130)
..+.|..+++..+..+.. .-++.+.++|.|
T Consensus 56 ~~~~l~~~i~~al~~l~gv~~V~V~l~~~p~W 87 (103)
T 3cq1_A 56 LHDSLGEAVRQALSRLPGVEEVEVEVTFEPPW 87 (103)
T ss_dssp SSCHHHHHHHHHHHTSTTCCEEEEEECCSSCC
T ss_pred HHHHHHHHHHHHHHhCCCceeEEEEEecCCCC
Confidence 355677777777665532 235778899999
No 145
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=24.63 E-value=2e+02 Score=20.85 Aligned_cols=67 Identities=19% Similarity=0.226 Sum_probs=41.4
Q ss_pred ccceeEEEEehhhhH----HHHHHHHHHHhcccc--CCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHHHhc
Q 046110 6 REDVILLILVKWRGL----IDLGSVVETLCGKIS--NWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWLKDN 75 (130)
Q Consensus 6 ~~~~~~~~~~~~~~~----~~l~~Ql~~~l~~i~--~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l~~~ 75 (130)
++-....+-|+..=. .++.+-++.+..-.. ..++++ -| | +|==+..-++|+.+.++++.+.+.|.+.
T Consensus 36 e~aLVvF~~VE~~De~~~~~vv~~av~eI~~~a~kv~~~~iv-lY-P-yAHLSs~La~P~~A~~iL~~le~~L~~~ 108 (143)
T 2hl0_A 36 EEVLVAFISVEKVDEKNPEEVSLKAIEEISKVAEQVKAENVF-VY-P-FAHLSSELAKPSVAMDILNRVYQGLKER 108 (143)
T ss_dssp EEEEEEEEECBGGGGGCHHHHHHHHHHHHHHHHHHHTCCEEE-EE-E-CGGGCSSBCCHHHHHHHHHHHHHHHHHT
T ss_pred eeeEEEEEEEccCCcCCHHHHHHHHHHHHHHHHHhcCCCEEE-Ee-c-cccccCccCChHHHHHHHHHHHHHHHhC
Confidence 344455566654332 234333344333222 345554 47 6 5555788899999999999999999874
No 146
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=24.45 E-value=2.3e+02 Score=21.84 Aligned_cols=59 Identities=10% Similarity=0.055 Sum_probs=29.9
Q ss_pred Ccccc-ccceeEEEE-e--hhhhHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCCCChHHHHHHHHHHHHHH
Q 046110 1 PLFEF-REDVILLIL-V--KWRGLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKVAVPAQAQEVHAELRKWL 72 (130)
Q Consensus 1 ~~~~~-~~~~~~~~~-~--~~~~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~as~~~i~~v~~~IR~~l 72 (130)
|++.+ ++|.+...- | ++++.+.+.+++... + ....++.|+| .-.++.+++..+.|++.+
T Consensus 186 PIl~~~~~G~l~~~~KvRg~kka~~~l~~~~~~~--~-~~~~~v~i~h----------~~~~e~a~~l~~~l~~~~ 248 (278)
T 3fdj_A 186 VIGTASSHGTLEAIGKCRGDKKLLVKLQALLDDA--G-YEGGKLRICH----------VENEALADKIADMIKQAY 248 (278)
T ss_dssp EEEEECTTSSEEEEEEEESHHHHHHHHHHHHHHH--T-CCSCCEEEEE----------SSCHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCeEEEeeeecCHHHHHHHHHHHHHHh--C-CCCcEEEEEe----------cCCHHHHHHHHHHHHHhC
Confidence 78888 566543321 2 223333444444331 1 1223455555 235677777777776554
No 147
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=24.35 E-value=41 Score=25.48 Aligned_cols=32 Identities=9% Similarity=-0.027 Sum_probs=25.3
Q ss_pred cCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
++|++-.|-+ +++++.+++.. -.||++||.+-
T Consensus 181 ~ipvIA~GGI~t~~d~~~~~~~---GadgV~VGsai 213 (229)
T 3q58_A 181 GCRVIAEGRYNTPALAANAIEH---GAWAVTVGSAI 213 (229)
T ss_dssp TCCEEEESSCCSHHHHHHHHHT---TCSEEEECHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHc---CCCEEEEchHh
Confidence 4788887777 69999999874 45999997553
No 148
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=24.34 E-value=31 Score=26.87 Aligned_cols=33 Identities=9% Similarity=-0.099 Sum_probs=25.5
Q ss_pred cCcEE--EcCCC-CcccHHHHHcccCCCcceEEEeeeec
Q 046110 83 STRII--YRDTV-INSTLQLNIQYYYPNLFIELTLAFSI 118 (130)
Q Consensus 83 ~irIL--YGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~ 118 (130)
++|++ ..|-+ +++|+.+++.. ..||+++|.+-.
T Consensus 207 ~iPvi~~a~GGI~~~~d~~~~~~~---GadgV~vGsai~ 242 (305)
T 2nv1_A 207 KLPVVNFAAGGVATPADAALMMQL---GADGVFVGSGIF 242 (305)
T ss_dssp SCSSCEEBCSCCCSHHHHHHHHHT---TCSCEEECGGGG
T ss_pred CCCEEEEeccCCCCHHHHHHHHHc---CCCEEEEcHHHH
Confidence 57787 77777 99999999863 358999976654
No 149
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=24.16 E-value=58 Score=27.03 Aligned_cols=49 Identities=10% Similarity=-0.033 Sum_probs=33.7
Q ss_pred HHHHHHHHHHhccChhhcCcCcEEEcCCC-CcccHHHHHcccCCCcceEEEeeeecccccccc
Q 046110 64 VHAELRKWLKDNVNAEVAASTRIIYRDTV-INSTLQLNIQYYYPNLFIELTLAFSIRYQGDVF 125 (130)
Q Consensus 64 v~~~IR~~l~~~~~~~~a~~irILYGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F 125 (130)
..+.||+.+. .+++++-.|.+ +++.+++++.. .|.+.+|.+.+ .||+-+
T Consensus 307 ~a~~Ik~~v~--------~~iPVI~~GgI~t~e~Ae~~L~~----aDlVaiGR~~I-anPdlv 356 (419)
T 3l5a_A 307 VNQIVYEHLA--------GRIPLIASGGINSPESALDALQH----ADMVGMSSPFV-TEPDFV 356 (419)
T ss_dssp HHHHHHHHHT--------TSSCEEECSSCCSHHHHHHHGGG----CSEEEESTHHH-HCTTHH
T ss_pred HHHHHHHHcC--------CCCeEEEECCCCCHHHHHHHHHh----CCcHHHHHHHH-HCcHHH
Confidence 4456665442 25788887775 79999999864 58888877765 355443
No 150
>2x47_A Macro domain-containing protein 1; signaling protein, signal transduction, estrogen signaling; 1.70A {Homo sapiens}
Probab=23.96 E-value=1.2e+02 Score=23.16 Aligned_cols=52 Identities=29% Similarity=0.377 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCC--CChHHHHHHHHHHHHHHHh
Q 046110 20 LIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKV--AVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 20 ~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~--as~~~i~~v~~~IR~~l~~ 74 (130)
.+.|.+-.+++|....+.+--.||+ | +||||.- +..+-++-+.+.+|+++.+
T Consensus 150 ~~~L~~~y~~~L~~A~e~~i~SIAf-P--~IstG~~g~p~~~aa~i~~~~v~~fl~~ 203 (235)
T 2x47_A 150 AAELRSCYLSSLDLLLEHRLRSVAF-P--CISTGVFGYPCEAAAEIVLATLREWLEQ 203 (235)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEE-C--CTTCSTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCceEEe-c--cccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4456666677776443323335788 6 7998764 4445556677888888865
No 151
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=23.66 E-value=82 Score=24.95 Aligned_cols=46 Identities=9% Similarity=0.005 Sum_probs=32.3
Q ss_pred CChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHHHHcccCCCcceEEE
Q 046110 56 AVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQLNIQYYYPNLFIELT 113 (130)
Q Consensus 56 as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~l~~~~~~dvdG~Li 113 (130)
.+++++.++.+.++. .+ .+++|.=-|.++++|+.++... .+|++=+
T Consensus 226 ~~~~~l~~~v~~l~~----~~-----~~~~I~ASGGIt~~ni~~~~~a---GaD~i~v 271 (299)
T 2jbm_A 226 FKPEELHPTATVLKA----QF-----PSVAVEASGGITLDNLPQFCGP---HIDVISM 271 (299)
T ss_dssp CCHHHHHHHHHHHHH----HC-----TTSEEEEESSCCTTTHHHHCCT---TCCEEEC
T ss_pred CCHHHHHHHHHHhhc----cC-----CCeeEEEECCCCHHHHHHHHHC---CCCEEEE
Confidence 568888877776653 11 2467888888999999999864 3465444
No 152
>1bba_A Bovine pancreatic polypeptide; pancreatic hormone; NMR {Bos taurus} SCOP: j.6.1.1 PDB: 1ljv_A 1tz5_A 1v1d_A
Probab=23.60 E-value=61 Score=18.50 Aligned_cols=23 Identities=35% Similarity=0.561 Sum_probs=19.9
Q ss_pred CCCCCChHHHHHHHHHHHHHHHh
Q 046110 52 TGKVAVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 52 tG~~as~~~i~~v~~~IR~~l~~ 74 (130)
-|.-|++|+..+-...+|.++.-
T Consensus 8 PG~dA~pEela~Y~~~Lr~YiNl 30 (36)
T 1bba_A 8 PGDNATPEQMAQYAAELRRYINM 30 (36)
T ss_dssp CSSCSSTTHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Confidence 47789999999999999998753
No 153
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=23.58 E-value=78 Score=25.50 Aligned_cols=43 Identities=12% Similarity=0.097 Sum_probs=32.5
Q ss_pred CCChHHHHHHHHHHHHHHHhccChhhcCcCcEEEcCCCCcccHHH
Q 046110 55 VAVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYRDTVINSTLQL 99 (130)
Q Consensus 55 ~as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYGGSV~~~N~~~ 99 (130)
-||.+++.+..+.||+.+.++||-.---.++++ |.-..-|+.+
T Consensus 295 ~Ata~dv~~L~~~v~~~V~~~fgv~Le~Ev~~i--g~~~~~~~~~ 337 (340)
T 1uxy_A 295 NAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFI--GASGEVSAVE 337 (340)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHSCCCCBCSEEE--ETTEECCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHCCEeEEeeEEE--CCCccCchhh
Confidence 589999999999999999999986666667777 3333334443
No 154
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=23.40 E-value=85 Score=17.97 Aligned_cols=35 Identities=14% Similarity=0.296 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhccc-c-CCCceEEEeeee----eecCCCC
Q 046110 20 LIDLGSVVETLCGKI-S-NWDNVVLAYEPV----WVIGTGK 54 (130)
Q Consensus 20 ~~~l~~Ql~~~l~~i-~-~~~~vvIAYEPv----WAIGtG~ 54 (130)
++.|.+.+...+... . +.+.+.|.++.+ |.+|.+.
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~ 57 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEVRVILYEVRRDQWAAGGVL 57 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGEEETTEE
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEE
Confidence 345666666655542 2 356777777776 9998643
No 155
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=23.30 E-value=1.2e+02 Score=23.75 Aligned_cols=58 Identities=3% Similarity=-0.004 Sum_probs=38.3
Q ss_pred cC-CCCC--CChHHHHHHHHHHHHHHHhccChhhcCcCcEEEc-CCCCcccHHHHHc-ccCCCcceEEEee
Q 046110 50 IG-TGKV--AVPAQAQEVHAELRKWLKDNVNAEVAASTRIIYR-DTVINSTLQLNIQ-YYYPNLFIELTLA 115 (130)
Q Consensus 50 IG-tG~~--as~~~i~~v~~~IR~~l~~~~~~~~a~~irILYG-GSV~~~N~~~l~~-~~~~dvdG~Lig~ 115 (130)
-| ||.. .|.++=.++.+..++.. +.+++++-| |+-+...+.++.+ ..+...||+|+..
T Consensus 49 ~GtTGE~~~Ls~~Er~~v~~~~~~~~--------~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 49 LANFSEQFAITDDERDVLTRTILEHV--------AGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp SSGGGTGGGSCHHHHHHHHHHHHHHH--------TTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred CccccCcccCCHHHHHHHHHHHHHHh--------CCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 56 5664 56666666666665543 346899998 7777777777765 2345679999843
No 156
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=22.47 E-value=1.4e+02 Score=20.60 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHhcccc-CCCceEEEeeee----eecCCCCC
Q 046110 20 LIDLGSVVETLCGKIS-NWDNVVLAYEPV----WVIGTGKV 55 (130)
Q Consensus 20 ~~~l~~Ql~~~l~~i~-~~~~vvIAYEPv----WAIGtG~~ 55 (130)
++.|.+.+...+..+. ..+++.|.++-+ |++|.|..
T Consensus 81 K~~L~~~it~~l~~lg~~~~~v~V~i~E~~~~~W~~ggG~a 121 (136)
T 3mlc_A 81 KQRVFAAITESLAPIGVAGSDVFIAITENAPHDWSFGFGSA 121 (136)
T ss_dssp HHHHHHHHHHHHTTTTCCGGGEEEEEEEECGGGEECBTTBC
T ss_pred HHHHHHHHHHHHHHcCCCcccEEEEEEEcCHHHeeecCcEe
Confidence 3355566666663333 456677777765 99999984
No 157
>2fg1_A Conserved hypothetical protein BT1257; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.25A {Bacteroides thetaiotaomicron} SCOP: c.50.1.2 PDB: 2afc_A
Probab=22.33 E-value=1.3e+02 Score=21.13 Aligned_cols=48 Identities=10% Similarity=0.037 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCC-CChHHHHHHHHHHHHHHHh
Q 046110 20 LIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKV-AVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 20 ~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~-as~~~i~~v~~~IR~~l~~ 74 (130)
.+.|.+=++.++....+.. ..||+ | +||||.- -+.+++ .+.|++.+.+
T Consensus 100 ~~~l~~~l~~~~~~a~~~~-~sIa~-P--~Ig~G~~G~~w~~v---~~ii~~~l~~ 148 (158)
T 2fg1_A 100 YDAVRQCLKEVALFTIAHK-ASVHM-P--RIGCGLAGGKWELM---EQIIKEELIT 148 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHT-CEEEE-C--CTTCSTTCCCHHHH---HHHHHHHTGG
T ss_pred HHHHHHHHHHHHHHHHHhC-CeEEe-c--CcCCCCCCCCHHHH---HHHHHHHhcc
Confidence 3344444555444332222 37888 6 7998775 444443 4456666543
No 158
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=22.14 E-value=1.3e+02 Score=21.77 Aligned_cols=31 Identities=10% Similarity=-0.067 Sum_probs=21.3
Q ss_pred CceEEEeeeeeecCCCCCCChHHHHHHHHHH
Q 046110 38 DNVVLAYEPVWVIGTGKVAVPAQAQEVHAEL 68 (130)
Q Consensus 38 ~~vvIAYEPvWAIGtG~~as~~~i~~v~~~I 68 (130)
..+.|++||.+--++-...+++++.++++.+
T Consensus 138 ~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 168 (285)
T 1qtw_A 138 QGVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 (285)
T ss_dssp SSCEEEEECCCCCTTBCCSSHHHHHHHHHHC
T ss_pred CCCEEEEecCCCCCCcccCCHHHHHHHHHhh
Confidence 4689999999733333345778877776665
No 159
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=21.48 E-value=1.1e+02 Score=22.44 Aligned_cols=50 Identities=16% Similarity=0.304 Sum_probs=30.0
Q ss_pred HHHHHHHHhccccCCCceEEEeeeeeecCCCCC--CChHHHHHHHHHHHHHHHhc
Q 046110 23 LGSVVETLCGKISNWDNVVLAYEPVWVIGTGKV--AVPAQAQEVHAELRKWLKDN 75 (130)
Q Consensus 23 l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~--as~~~i~~v~~~IR~~l~~~ 75 (130)
|..-.+++|....+.+--.||+ | |||||.- +..+-++-+.+.+|+++.+.
T Consensus 102 L~~~y~~~L~~a~~~~~~SIAf-P--~IstG~~g~p~~~aa~i~~~~v~~fl~~~ 153 (183)
T 4abl_A 102 VKSSVSSVLQECEKKNYSSICL-P--AIGTGNAKQHPDKVAEAIIDAIEDFVQKG 153 (183)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE-C--CTTSSTTCCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCCeEee-c--cccCCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 4444444554332222235777 6 7998764 44455567788899988764
No 160
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans}
Probab=21.46 E-value=80 Score=22.88 Aligned_cols=26 Identities=8% Similarity=0.155 Sum_probs=18.3
Q ss_pred eeeeeecCCCCCCChHHHHHHHHHHHHHH
Q 046110 44 YEPVWVIGTGKVAVPAQAQEVHAELRKWL 72 (130)
Q Consensus 44 YEPvWAIGtG~~as~~~i~~v~~~IR~~l 72 (130)
++|+|.- ...++++.+++.+.||+.|
T Consensus 146 f~~~~~~---~~~~~~~l~~~~~~ir~~L 171 (173)
T 3l7x_A 146 FDIRFVQ---HEPDFTRLGQLAEDIQKEI 171 (173)
T ss_dssp CCCCCCC---CCCCHHHHHHHHHHHHHHH
T ss_pred cccccCC---CCCCHHHHHHHHHHHHHHh
Confidence 3566632 2346799999999999866
No 161
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=20.95 E-value=30 Score=24.53 Aligned_cols=35 Identities=6% Similarity=-0.352 Sum_probs=20.9
Q ss_pred CcEEEcCCCCcccHHHHH--ccc-CCCcceEEEeeeec
Q 046110 84 TRIIYRDTVINSTLQLNI--QYY-YPNLFIELTLAFSI 118 (130)
Q Consensus 84 irILYGGSV~~~N~~~l~--~~~-~~dvdG~Lig~~s~ 118 (130)
++.+||||.+|=-...+. ... ....|-+.++.++.
T Consensus 1 m~~i~gGtFDPiH~GHl~l~~~a~~~~~d~viv~v~~~ 38 (148)
T 3do8_A 1 MKVALGGTFEPLHEGHKKLIDVAIKLGGRDITIGVTSD 38 (148)
T ss_dssp CCEEEEECCSSCCHHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CEEEEEeeCCCCCHHHHHHHHHHHHhCCCEEEEEECCC
Confidence 378999999986554431 100 01236677777764
No 162
>1njr_A 32.1 kDa protein in ADH3-RCA1 intergenic region; structural genomics, dimer, two domain organization, PSI, PR structure initiative; HET: XYL; 1.90A {Saccharomyces cerevisiae} SCOP: c.50.1.2 PDB: 1txz_A* 1ty8_A*
Probab=20.95 E-value=2.3e+02 Score=22.46 Aligned_cols=52 Identities=15% Similarity=0.056 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhccccCCCceEEEeeeeeecCCCCC--CChHHHHHHHHHHHHHHHh
Q 046110 19 GLIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGKV--AVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 19 ~~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~--as~~~i~~v~~~IR~~l~~ 74 (130)
..+.|.+-++++|... +.+--.||+ | |||||.- +..+-++.+...+++++.+
T Consensus 166 ~~~~L~~~~~~~L~~a-e~~i~SIAf-P--aIsTGv~G~P~~~aA~i~~~av~~f~~~ 219 (284)
T 1njr_A 166 GFEPVFNAMWNALMHS-PKDIDGLII-P--GLCTGYAGVPPIISCKSMAFALRLYMAG 219 (284)
T ss_dssp THHHHHHHHHHHHHTS-CTTCSEEEE-C--CTTCSTTCCCHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHH-HhCCCEEEE-C--cccccCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3467777788888766 333336788 6 7998764 4455556677888887754
No 163
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=20.93 E-value=43 Score=25.74 Aligned_cols=33 Identities=3% Similarity=-0.080 Sum_probs=24.7
Q ss_pred cCcEE--EcCCC-CcccHHHHHcccCCCcceEEEeeeec
Q 046110 83 STRII--YRDTV-INSTLQLNIQYYYPNLFIELTLAFSI 118 (130)
Q Consensus 83 ~irIL--YGGSV-~~~N~~~l~~~~~~dvdG~Lig~~s~ 118 (130)
.+|++ -.|.| +++|+.+++.. ..||+.+|.+-.
T Consensus 207 ~~pvi~~a~GGI~~~e~i~~~~~a---GadgvvvGsai~ 242 (297)
T 2zbt_A 207 RLPVVNFAAGGIATPADAALMMHL---GMDGVFVGSGIF 242 (297)
T ss_dssp SCSSCEEBCSSCCSHHHHHHHHHT---TCSEEEECGGGG
T ss_pred CCCcEEEeeCCCCCHHHHHHHHHc---CCCEEEEchHHh
Confidence 45666 67778 99999999864 458999965543
No 164
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.66 E-value=1.6e+02 Score=21.33 Aligned_cols=30 Identities=7% Similarity=-0.035 Sum_probs=22.2
Q ss_pred cCcEEEcCCCCcccHHHHHcccCCCcceEEEee
Q 046110 83 STRIIYRDTVINSTLQLNIQYYYPNLFIELTLA 115 (130)
Q Consensus 83 ~irILYGGSV~~~N~~~l~~~~~~dvdG~Lig~ 115 (130)
++|++==|-++++|+.+++.. .. +|+-++.
T Consensus 144 ~iPviaiGGI~~~nv~~~~~~-Ga--~gVav~s 173 (210)
T 3ceu_A 144 DSKVMALGGINEDNLLEIKDF-GF--GGAVVLG 173 (210)
T ss_dssp STTEEEESSCCTTTHHHHHHT-TC--SEEEESH
T ss_pred CCCEEEECCCCHHHHHHHHHh-CC--CEEEEhH
Confidence 467777777999999999973 44 6666643
No 165
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=20.56 E-value=1.2e+02 Score=22.66 Aligned_cols=50 Identities=14% Similarity=0.256 Sum_probs=30.5
Q ss_pred HHHHHHHHhccccCCCceEEEeeeeeecCCCCC--CChHHHHHHHHHHHHHHHhc
Q 046110 23 LGSVVETLCGKISNWDNVVLAYEPVWVIGTGKV--AVPAQAQEVHAELRKWLKDN 75 (130)
Q Consensus 23 l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~~--as~~~i~~v~~~IR~~l~~~ 75 (130)
|..-++++|....+.+--.||+ | +||||.- +..+-++-+.+.+|+++.+.
T Consensus 113 L~~~y~~~L~~a~~~~i~SIAf-P--~IgtG~~G~p~~~aa~i~~~~v~~fl~~~ 164 (199)
T 3kh6_A 113 VRKTVTSVLEECEQRKYTSVSL-P--AIGTGNAGKNPITVADNIIDAIVDFSSQH 164 (199)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE-C--CTTSSTTCCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCEEee-c--ccccCCCCcCHHHHHHHHHHHHHHHHHhc
Confidence 4444555554332222235788 6 7998765 44455566788899988764
No 166
>2l60_A Peptide YY; GPCR ligand, hormone; NMR {Synthetic}
Probab=20.42 E-value=82 Score=18.44 Aligned_cols=22 Identities=27% Similarity=0.268 Sum_probs=19.1
Q ss_pred CCCCChHHHHHHHHHHHHHHHh
Q 046110 53 GKVAVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 53 G~~as~~~i~~v~~~IR~~l~~ 74 (130)
|.-|+||+..+-+..+|+++.-
T Consensus 13 g~~aspEela~Y~~~Lr~Yinl 34 (41)
T 2l60_A 13 LKKLSPEELNRYYASLRHYLNL 34 (41)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 5678999999999999998854
No 167
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=20.19 E-value=29 Score=26.86 Aligned_cols=43 Identities=9% Similarity=-0.075 Sum_probs=31.1
Q ss_pred cCcEEEcCCCC-cccHHHHHcccCCCcceEEEeeeeccccccccccc
Q 046110 83 STRIIYRDTVI-NSTLQLNIQYYYPNLFIELTLAFSIRYQGDVFSCI 128 (130)
Q Consensus 83 ~irILYGGSV~-~~N~~~l~~~~~~dvdG~Lig~~s~~~~~~~F~~I 128 (130)
+++|+..|-|+ ++++.+.+.. .. |++.+|.+-+..+|+-|.+|
T Consensus 244 ~ipvi~~GGI~~~~da~~~l~~-GA--d~V~ig~~~l~~~p~~~~~i 287 (314)
T 2e6f_A 244 DKLVFGCGGVYSGEDAFLHILA-GA--SMVQVGTALQEEGPGIFTRL 287 (314)
T ss_dssp TSEEEEESSCCSHHHHHHHHHH-TC--SSEEECHHHHHHCTTHHHHH
T ss_pred CCCEEEECCCCCHHHHHHHHHc-CC--CEEEEchhhHhcCcHHHHHH
Confidence 58999988885 8999998853 44 88899777654366555444
No 168
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=20.15 E-value=1.4e+02 Score=21.82 Aligned_cols=31 Identities=16% Similarity=0.168 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHhccccCCCceEEEeeeeeecCCCC
Q 046110 20 LIDLGSVVETLCGKISNWDNVVLAYEPVWVIGTGK 54 (130)
Q Consensus 20 ~~~l~~Ql~~~l~~i~~~~~vvIAYEPvWAIGtG~ 54 (130)
...+.++++.++.. +++.+.|.|+.-..+|.
T Consensus 8 ~~~~~~~l~~al~~----~~~~~~~QPiv~~~~~~ 38 (250)
T 4f3h_A 8 IERWVEQLREALIG----DGFLLHYQPVLNLQGEP 38 (250)
T ss_dssp HHHHHHHHHHHTSS----CCEEEEEEECEESSSCC
T ss_pred HHHHHHHHHHHHhc----CcEEEEEcceEECCCCC
Confidence 34566777777663 57888888888877765
No 169
>2jr5_A UPF0350 protein VC_2471; structure, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Vibrio cholerae}
Probab=20.15 E-value=75 Score=21.24 Aligned_cols=26 Identities=15% Similarity=0.313 Sum_probs=20.4
Q ss_pred eecCCCCCCChHHHHHHHHHHHHHHHh
Q 046110 48 WVIGTGKVAVPAQAQEVHAELRKWLKD 74 (130)
Q Consensus 48 WAIGtG~~as~~~i~~v~~~IR~~l~~ 74 (130)
|+.|...+|++ ....+.+.||+....
T Consensus 58 W~~g~~~~p~~-~~~~lv~~I~~~~~~ 83 (94)
T 2jr5_A 58 WVMGHGRCENL-GLAAMVDKIVAHNLS 83 (94)
T ss_dssp HHHTCCCCSCH-HHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCH-HHHHHHHHHHHHhcc
Confidence 99998877765 568899999987553
No 170
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=20.05 E-value=87 Score=25.74 Aligned_cols=32 Identities=6% Similarity=-0.152 Sum_probs=24.4
Q ss_pred cCcEE---EcCCCCcccHHHHHcccCCCcceEEEeeee
Q 046110 83 STRII---YRDTVINSTLQLNIQYYYPNLFIELTLAFS 117 (130)
Q Consensus 83 ~irIL---YGGSV~~~N~~~l~~~~~~dvdG~Lig~~s 117 (130)
++|++ =||=-+++|+.+++.. ..||++||.+-
T Consensus 240 ~IPVV~VAeGGI~Tpeda~~~l~~---GaDgV~VGsaI 274 (330)
T 2yzr_A 240 RLPVVNFAAGGVATPADAALMMQL---GSDGVFVGSGI 274 (330)
T ss_dssp SCSSEEEECSCCCSHHHHHHHHHT---TCSCEEESHHH
T ss_pred CCCeEEEEECCCCCHHHHHHHHHc---CcCEEeeHHHH
Confidence 56775 3666689999999975 45999997664
No 171
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1
Probab=20.02 E-value=71 Score=21.74 Aligned_cols=30 Identities=20% Similarity=0.405 Sum_probs=21.5
Q ss_pred EeeeeeecCCCCCCChHHHHHHHHHHHHHHH
Q 046110 43 AYEPVWVIGTGKVAVPAQAQEVHAELRKWLK 73 (130)
Q Consensus 43 AYEPvWAIGtG~~as~~~i~~v~~~IR~~l~ 73 (130)
.+++.|. +.....++++.+++.+.||+.+.
T Consensus 114 ~~~~~~~-~~~~~~~~~~~~~~~~~lr~~l~ 143 (145)
T 1y23_A 114 GFGAVWK-THADDYKPEDLQNISSSIAKRLA 143 (145)
T ss_dssp SEEEEEC-CCGGGSCHHHHHHHHHHHHHHTC
T ss_pred CcccccC-CCCCCCCHHHHHHHHHHHHHHhh
Confidence 3567884 11245788999999999998763
Done!